TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 1 - 149 | 6.4e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 220 - 291 | 4.9e-13 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 481 - 555 | 4.3e-11 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 488 - 558 | 7.2e-06 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 209 |
| AccI | GTMKAC | 1 cut(s) | 705 |
| AccIII | TCCGGA | 1 cut(s) | 1121 |
| AciI | CCGC | 1 cut(s) | 888 |
| AclI | AACGTT | 2 cut(s) | 346, 618 |
| AclWI | GGATC | 4 cut(s) | 443, 590, 1470, 1663 |
| AcsI | RAATTY | 6 cut(s) | 321, 415, 1150, 1228, 1321, 1490 |
| AcuI | CTGAAG | 1 cut(s) | 1244 |
| AdeI | CACNNNGTG | 1 cut(s) | 482 |
| AfaI | GTAC | 1 cut(s) | 489 |
| AflII | CTTAAG | 1 cut(s) | 1255 |
| AflIII | ACRYGT | 1 cut(s) | 481 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1392 |
| AjiI | CACGTC | 1 cut(s) | 256 |
| AjnI | CCWGG | 3 cut(s) | 310, 454, 498 |
| Alw26I | GTCTC | 2 cut(s) | 133, 797 |
| AlwI | GGATC | 4 cut(s) | 443, 590, 1470, 1663 |
| Aor13HI | TCCGGA | 1 cut(s) | 1121 |
| AoxI | GGCC | 5 cut(s) | 17, 118, 308, 502, 780 |
| ApaI | GGGCCC | 1 cut(s) | 21 |
| ApeKI | GCWGC | 3 cut(s) | 982, 1404, 1641 |
| ApoI | RAATTY | 6 cut(s) | 321, 415, 1150, 1228, 1321, 1490 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 434 |
| AspLEI | GCGC | 1 cut(s) | 1177 |
| AspS9I | GGNCC | 5 cut(s) | 17, 18, 308, 502, 1119 |
| AsuC2I | CCSGG | 1 cut(s) | 21 |
| AsuHPI | GGTGA | 3 cut(s) | 470, 890, 1285 |
| AvaII | GGWCC | 1 cut(s) | 1119 |
| BaeGI | GKGCMC | 1 cut(s) | 21 |
| BanII | GRGCYC | 1 cut(s) | 21 |
| BbvI | GCAGC | 3 cut(s) | 994, 1391, 1653 |
| BccI | CCATC | 4 cut(s) | 298, 369, 572, 1507 |
| BceAI | ACGGC | 1 cut(s) | 1179 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1043, 1077 |
| BciT130I | CCWGG | 3 cut(s) | 312, 456, 500 |
| BclI | TGATCA | 1 cut(s) | 190 |
| BcnI | CCSGG | 1 cut(s) | 21 |
| BcoDI | GTCTC | 2 cut(s) | 133, 797 |
| BfrI | CTTAAG | 1 cut(s) | 1255 |
| BisI | GCNGC | 3 cut(s) | 983, 1405, 1642 |
| BlsI | GCNGC | 3 cut(s) | 984, 1406, 1643 |
| Bme1390I | CCNGG | 4 cut(s) | 21, 312, 456, 500 |
| Bme18I | GGWCC | 1 cut(s) | 1119 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1392 |
| BmgBI | CACGTC | 1 cut(s) | 256 |
| BmgT120I | GGNCC | 5 cut(s) | 17, 18, 308, 502, 1119 |
| BmiI | GGNNCC | 2 cut(s) | 18, 19 |
| BmrFI | CCNGG | 4 cut(s) | 21, 312, 456, 500 |
| BmsI | GCATC | 5 cut(s) | 210, 628, 819, 907, 975 |
| BoxI | GACNNNNGTC | 1 cut(s) | 258 |
| BpmI | CTGGAG | 1 cut(s) | 438 |
| BpuEI | CTTGAG | 1 cut(s) | 1411 |
| BpuMI | CCSGG | 1 cut(s) | 21 |
| Bsa29I | ATCGAT | 1 cut(s) | 1083 |
| BsaJI | CCNNGG | 3 cut(s) | 498, 499, 1160 |
| BsaWI | WCCGGW | 2 cut(s) | 1121, 1295 |
| Bse1I | ACTGG | 1 cut(s) | 760 |
| Bse3DI | GCAATG | 2 cut(s) | 190, 1452 |
| BseAI | TCCGGA | 1 cut(s) | 1121 |
| BseBI | CCWGG | 3 cut(s) | 312, 456, 500 |
| BseCI | ATCGAT | 1 cut(s) | 1083 |
| BseDI | CCNNGG | 3 cut(s) | 498, 499, 1160 |
| BseGI | GGATG | 6 cut(s) | 225, 290, 562, 834, 1130, 1156 |
| BseMI | GCAATG | 2 cut(s) | 190, 1452 |
| BseNI | ACTGG | 1 cut(s) | 760 |
| BseSI | GKGCMC | 1 cut(s) | 21 |
| BseXI | GCAGC | 3 cut(s) | 994, 1391, 1653 |
| BshFI | GGCC | 5 cut(s) | 19, 120, 310, 504, 782 |
| BshVI | ATCGAT | 1 cut(s) | 1083 |
| BsiSI | CCGG | 3 cut(s) | 21, 1122, 1296 |
| BslFI | GGGAC | 2 cut(s) | 176, 1233 |
| BsmAI | GTCTC | 2 cut(s) | 133, 797 |
| BsmFI | GGGAC | 2 cut(s) | 176, 1233 |
| BsmI | GAATGC | 4 cut(s) | 434, 436, 1012, 1564 |
| BsnI | GGCC | 5 cut(s) | 19, 120, 310, 504, 782 |
| Bsp120I | GGGCCC | 1 cut(s) | 17 |
| Bsp1286I | GDGCHC | 1 cut(s) | 21 |
| Bsp13I | TCCGGA | 1 cut(s) | 1121 |
| Bsp1407I | TGTACA | 1 cut(s) | 487 |
| Bsp143I | GATC | 8 cut(s) | 110, 190, 400, 448, 595, 1462, 1668, 1675 |
| BspACI | CCGC | 1 cut(s) | 888 |
| BspANI | GGCC | 5 cut(s) | 19, 120, 310, 504, 782 |
| BspDI | ATCGAT | 1 cut(s) | 1083 |
| BspEI | TCCGGA | 1 cut(s) | 1121 |
| BspLI | GGNNCC | 2 cut(s) | 18, 19 |
| BspPI | GGATC | 4 cut(s) | 443, 590, 1470, 1663 |
| BspTI | CTTAAG | 1 cut(s) | 1255 |
| BsrDI | GCAATG | 2 cut(s) | 190, 1452 |
| BsrGI | TGTACA | 1 cut(s) | 487 |
| BsrI | ACTGG | 1 cut(s) | 760 |
| BssECI | CCNNGG | 3 cut(s) | 498, 499, 1160 |
| BssMI | GATC | 8 cut(s) | 110, 190, 400, 448, 595, 1462, 1668, 1675 |
| BssT1I | CCWWGG | 1 cut(s) | 1160 |
| Bst2UI | CCWGG | 3 cut(s) | 312, 456, 500 |
| BstAFI | CTTAAG | 1 cut(s) | 1255 |
| BstAUI | TGTACA | 1 cut(s) | 487 |
| BstC8I | GCNNGC | 1 cut(s) | 733 |
| BstDEI | CTNAG | 2 cut(s) | 1037, 1466 |
| BstF5I | GGATG | 6 cut(s) | 225, 290, 562, 834, 1130, 1156 |
| BstHHI | GCGC | 1 cut(s) | 1177 |
| BstKTI | GATC | 8 cut(s) | 113, 193, 403, 451, 598, 1465, 1671, 1678 |
| BstMAI | GTCTC | 2 cut(s) | 133, 797 |
| BstMBI | GATC | 8 cut(s) | 110, 190, 400, 448, 595, 1462, 1668, 1675 |
| BstNI | CCWGG | 3 cut(s) | 312, 456, 500 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 258 |
| BstSCI | CCNGG | 4 cut(s) | 19, 310, 454, 498 |
| BstSLI | GKGCMC | 1 cut(s) | 21 |
| BstV1I | GCAGC | 3 cut(s) | 994, 1391, 1653 |
| BstX2I | RGATCY | 3 cut(s) | 595, 1462, 1668 |
| BstYI | RGATCY | 3 cut(s) | 595, 1462, 1668 |
| Bsu15I | ATCGAT | 1 cut(s) | 1083 |
| BsuRI | GGCC | 5 cut(s) | 19, 120, 310, 504, 782 |
| BsuTUI | ATCGAT | 1 cut(s) | 1083 |
| BtrI | CACGTC | 1 cut(s) | 256 |
| BtsCI | GGATG | 6 cut(s) | 225, 290, 562, 834, 1130, 1156 |
| Cac8I | GCNNGC | 1 cut(s) | 733 |
| CfoI | GCGC | 1 cut(s) | 1177 |
| Cfr13I | GGNCC | 5 cut(s) | 17, 18, 308, 502, 1119 |
| ClaI | ATCGAT | 1 cut(s) | 1083 |
| CseI | GACGC | 1 cut(s) | 857 |
| Csp6I | GTAC | 1 cut(s) | 488 |
| CviAII | CATG | 5 cut(s) | 296, 833, 926, 1585, 1638 |
| CviQI | GTAC | 1 cut(s) | 488 |
| DdeI | CTNAG | 2 cut(s) | 1037, 1466 |
| DpnI | GATC | 8 cut(s) | 112, 192, 402, 450, 597, 1464, 1670, 1677 |
| DpnII | GATC | 8 cut(s) | 110, 190, 400, 448, 595, 1462, 1668, 1675 |
| DraI | TTTAAA | 2 cut(s) | 657, 1525 |
| DraIII | CACNNNGTG | 1 cut(s) | 482 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1392 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1392 |
| EciI | GGCGGA | 1 cut(s) | 903 |
| Eco130I | CCWWGG | 1 cut(s) | 1160 |
| Eco147I | AGGCCT | 1 cut(s) | 782 |
| Eco24I | GRGCYC | 1 cut(s) | 21 |
| Eco32I | GATATC | 1 cut(s) | 676 |
| Eco47I | GGWCC | 1 cut(s) | 1119 |
| Eco57I | CTGAAG | 1 cut(s) | 1244 |
| EcoO109I | RGGNCCY | 2 cut(s) | 17, 502 |
| EcoRI | GAATTC | 1 cut(s) | 321 |
| EcoRII | CCWGG | 3 cut(s) | 310, 454, 498 |
| EcoRV | GATATC | 1 cut(s) | 676 |
| EcoT14I | CCWWGG | 1 cut(s) | 1160 |
| EcoT22I | ATGCAT | 2 cut(s) | 436, 834 |
| EcoT38I | GRGCYC | 1 cut(s) | 21 |
| ErhI | CCWWGG | 1 cut(s) | 1160 |
| FaeI | CATG | 5 cut(s) | 299, 836, 929, 1588, 1641 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 126, 158 |
| FaqI | GGGAC | 2 cut(s) | 176, 1233 |
| FatI | CATG | 5 cut(s) | 295, 832, 925, 1584, 1637 |
| FauNDI | CATATG | 2 cut(s) | 11, 1685 |
| FbaI | TGATCA | 1 cut(s) | 190 |
| FblI | GTMKAC | 1 cut(s) | 705 |
| Fnu4HI | GCNGC | 3 cut(s) | 983, 1405, 1642 |
| FokI | GGATG | 6 cut(s) | 232, 277, 569, 841, 1137, 1143 |
| FriOI | GRGCYC | 1 cut(s) | 21 |
| Fsp4HI | GCNGC | 3 cut(s) | 983, 1405, 1642 |
| GlaI | GCGC | 1 cut(s) | 1176 |
| GluI | GCNGC | 3 cut(s) | 983, 1405, 1642 |
| GsuI | CTGGAG | 1 cut(s) | 438 |
| HaeIII | GGCC | 5 cut(s) | 19, 120, 310, 504, 782 |
| HapII | CCGG | 3 cut(s) | 21, 1122, 1296 |
| HgaI | GACGC | 1 cut(s) | 857 |
| HhaI | GCGC | 1 cut(s) | 1177 |
| Hin1II | CATG | 5 cut(s) | 299, 836, 929, 1588, 1641 |
| Hin6I | GCGC | 1 cut(s) | 1175 |
| HinP1I | GCGC | 1 cut(s) | 1175 |
| HindIII | AAGCTT | 4 cut(s) | 408, 729, 1015, 1379 |
| HinfI | GANTC | 8 cut(s) | 164, 198, 259, 881, 1368, 1393, 1517, 1603 |
| HpaII | CCGG | 3 cut(s) | 21, 1122, 1296 |
| HphI | GGTGA | 3 cut(s) | 470, 890, 1285 |
| Hpy166II | GTNNAC | 2 cut(s) | 490, 706 |
| Hpy188I | TCNGA | 3 cut(s) | 1024, 1131, 1205 |
| Hpy188III | TCNNGA | 7 cut(s) | 388, 671, 872, 1122, 1285, 1397, 1664 |
| Hpy8I | GTNNAC | 2 cut(s) | 490, 706 |
| HpyAV | CCTTC | 6 cut(s) | 77, 169, 515, 885, 1155, 1394 |
| HpyCH4IV | ACGT | 4 cut(s) | 255, 346, 481, 618 |
| HpyCH4V | TGCA | 9 cut(s) | 183, 223, 434, 476, 764, 832, 1064, 1564, 1641 |
| HpyF3I | CTNAG | 2 cut(s) | 1037, 1466 |
| HpySE526I | ACGT | 4 cut(s) | 255, 346, 481, 618 |
| Hsp92II | CATG | 5 cut(s) | 299, 836, 929, 1588, 1641 |
| HspAI | GCGC | 1 cut(s) | 1175 |
| Kpn2I | TCCGGA | 1 cut(s) | 1121 |
| Ksp22I | TGATCA | 1 cut(s) | 190 |
| Kzo9I | GATC | 8 cut(s) | 110, 190, 400, 448, 595, 1462, 1668, 1675 |
| LmnI | GCTCC | 1 cut(s) | 1182 |
| Lsp1109I | GCAGC | 3 cut(s) | 994, 1391, 1653 |
| LweI | GCATC | 5 cut(s) | 210, 628, 819, 907, 975 |
| MaeII | ACGT | 4 cut(s) | 255, 346, 481, 618 |
| MaeIII | GTNAC | 2 cut(s) | 1384, 1653 |
| MalI | GATC | 8 cut(s) | 112, 192, 402, 450, 597, 1464, 1670, 1677 |
| MboI | GATC | 8 cut(s) | 110, 190, 400, 448, 595, 1462, 1668, 1675 |
| MboII | GAAGA | 4 cut(s) | 113, 605, 857, 1237 |
| MfeI | CAATTG | 2 cut(s) | 42, 1572 |
| MflI | RGATCY | 3 cut(s) | 595, 1462, 1668 |
| MhlI | GDGCHC | 1 cut(s) | 21 |
| MlyI | GAGTC | 4 cut(s) | 158, 207, 268, 1402 |
| MmeI | TCCRAC | 1 cut(s) | 1345 |
| MnlI | CCTC | 8 cut(s) | 376, 462, 752, 868, 970, 1098, 1210, 1480 |
| Mph1103I | ATGCAT | 2 cut(s) | 436, 834 |
| MroI | TCCGGA | 1 cut(s) | 1121 |
| MroXI | GAANNNNTTC | 1 cut(s) | 434 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1457 |
| MspCI | CTTAAG | 1 cut(s) | 1255 |
| MspI | CCGG | 3 cut(s) | 21, 1122, 1296 |
| MspR9I | CCNGG | 4 cut(s) | 21, 312, 456, 500 |
| MunI | CAATTG | 2 cut(s) | 42, 1572 |
| Mva1269I | GAATGC | 4 cut(s) | 434, 436, 1012, 1564 |
| MvaI | CCWGG | 3 cut(s) | 312, 456, 500 |
| NciI | CCSGG | 1 cut(s) | 21 |
| NdeI | CATATG | 2 cut(s) | 11, 1685 |
| NdeII | GATC | 8 cut(s) | 110, 190, 400, 448, 595, 1462, 1668, 1675 |
| NlaIII | CATG | 5 cut(s) | 299, 836, 929, 1588, 1641 |
| NlaIV | GGNNCC | 2 cut(s) | 18, 19 |
| NmuCI | GTSAC | 1 cut(s) | 1384 |
| NsiI | ATGCAT | 2 cut(s) | 436, 834 |
| PasI | CCCWGGG | 1 cut(s) | 499 |
| PceI | AGGCCT | 1 cut(s) | 782 |
| PctI | GAATGC | 4 cut(s) | 434, 436, 1012, 1564 |
| PdmI | GAANNNNTTC | 1 cut(s) | 434 |
| PfeI | GAWTC | 4 cut(s) | 881, 1368, 1517, 1603 |
| PkrI | GCNGC | 3 cut(s) | 984, 1406, 1643 |
| PleI | GAGTC | 4 cut(s) | 158, 206, 267, 1401 |
| PpsI | GAGTC | 4 cut(s) | 158, 206, 267, 1401 |
| PshAI | GACNNNNGTC | 1 cut(s) | 258 |
| PsiI | TTATAA | 1 cut(s) | 209 |
| Psp1406I | AACGTT | 2 cut(s) | 346, 618 |
| Psp6I | CCWGG | 3 cut(s) | 310, 454, 498 |
| PspGI | CCWGG | 3 cut(s) | 310, 454, 498 |
| PspN4I | GGNNCC | 2 cut(s) | 18, 19 |
| PspOMI | GGGCCC | 1 cut(s) | 17 |
| PspPI | GGNCC | 5 cut(s) | 17, 18, 308, 502, 1119 |
| PsuI | RGATCY | 3 cut(s) | 595, 1462, 1668 |
| RsaI | GTAC | 1 cut(s) | 489 |
| RsaNI | GTAC | 1 cut(s) | 488 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1457 |
| SatI | GCNGC | 3 cut(s) | 983, 1405, 1642 |
| Sau3AI | GATC | 8 cut(s) | 110, 190, 400, 448, 595, 1462, 1668, 1675 |
| Sau96I | GGNCC | 5 cut(s) | 17, 18, 308, 502, 1119 |
| SchI | GAGTC | 4 cut(s) | 158, 207, 268, 1402 |
| ScrFI | CCNGG | 4 cut(s) | 21, 312, 456, 500 |
| SduI | GDGCHC | 1 cut(s) | 21 |
| SfaNI | GCATC | 5 cut(s) | 210, 628, 819, 907, 975 |
| SinI | GGWCC | 1 cut(s) | 1119 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1457 |
| SmlI | CTYRAG | 2 cut(s) | 1255, 1390 |
| SmoI | CTYRAG | 2 cut(s) | 1255, 1390 |
| SseBI | AGGCCT | 1 cut(s) | 782 |
| SsiI | CCGC | 1 cut(s) | 888 |
| StuI | AGGCCT | 1 cut(s) | 782 |
| StyD4I | CCNGG | 4 cut(s) | 19, 310, 454, 498 |
| StyI | CCWWGG | 1 cut(s) | 1160 |
| TaiI | ACGT | 4 cut(s) | 258, 349, 484, 621 |
| TaqI | TCGA | 3 cut(s) | 150, 969, 1083 |
| TatI | WGTACW | 1 cut(s) | 487 |
| TfiI | GAWTC | 4 cut(s) | 881, 1368, 1517, 1603 |
| TseFI | GTSAC | 1 cut(s) | 1384 |
| TseI | GCWGC | 3 cut(s) | 982, 1404, 1641 |
| Tsp45I | GTSAC | 1 cut(s) | 1384 |
| TspDTI | ATGAA | 6 cut(s) | 387, 1043, 1145, 1343, 1557, 1672 |
| TspGWI | ACGGA | 1 cut(s) | 1351 |
| Vha464I | CTTAAG | 1 cut(s) | 1255 |
| VpaK11BI | GGWCC | 1 cut(s) | 1119 |
| XapI | RAATTY | 6 cut(s) | 321, 415, 1150, 1228, 1321, 1490 |
| XbaI | TCTAGA | 1 cut(s) | 1663 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 302 |
| XmiI | GTMKAC | 1 cut(s) | 705 |
| XmnI | GAANNNNTTC | 1 cut(s) | 434 |
| Zsp2I | ATGCAT | 2 cut(s) | 436, 834 |