TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 97 - 262 | 1.5e-51 | TIR domain |
| TIR_2 | PF13676 | 99 - 194 | 7.1e-15 | TIR domain |
| NB-ARC | PF00931 | 276 - 447 | 6.7e-21 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 516 - 590 | 1.2e-18 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_Zer-1 | PF25013 | 704 - 828 | 7.1e-08 | Zer-1-like, Leucine-rich repeats |
| LRR_13 | PF23286 | 752 - 838 | 4.8e-11 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2969 |
| Acc36I | ACCTGC | 1 cut(s) | 2969 |
| AccB1I | GGYRCC | 1 cut(s) | 805 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1129 |
| AccI | GTMKAC | 1 cut(s) | 1795 |
| AccII | CGCG | 2 cut(s) | 325, 1967 |
| AciI | CCGC | 6 cut(s) | 60, 109, 584, 1967, 2870, 3197 |
| AclI | AACGTT | 1 cut(s) | 1886 |
| AclWI | GGATC | 9 cut(s) | 231, 572, 1058, 1435, 1551, 2255, 2283, 2355, 2493 |
| AcoI | YGGCCR | 2 cut(s) | 28, 2179 |
| AcsI | RAATTY | 9 cut(s) | 176, 1926, 2100, 2616, 2624, 2679, 2697, 2912, 3233 |
| AcuI | CTGAAG | 3 cut(s) | 292, 2928, 3344 |
| AcvI | CACGTG | 1 cut(s) | 2936 |
| AfaI | GTAC | 1 cut(s) | 2448 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 54, 113, 118, 242, 1129, 1990, 2177 |
| AflII | CTTAAG | 2 cut(s) | 848, 2297 |
| AgeI | ACCGGT | 1 cut(s) | 2551 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2329 |
| AhlI | ACTAGT | 1 cut(s) | 2026 |
| AjnI | CCWGG | 2 cut(s) | 606, 2343 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2910, 2942 |
| AleI | CACNNNNGTG | 1 cut(s) | 18 |
| Alw21I | GWGCWC | 6 cut(s) | 1258, 1317, 2507, 2941, 3065, 3075 |
| Alw26I | GTCTC | 7 cut(s) | 371, 1655, 1773, 2189, 2316, 2421, 2749 |
| Alw44I | GTGCAC | 1 cut(s) | 1254 |
| AlwI | GGATC | 9 cut(s) | 231, 572, 1058, 1435, 1551, 2255, 2283, 2355, 2493 |
| ApaI | GGGCCC | 1 cut(s) | 2013 |
| ApaLI | GTGCAC | 1 cut(s) | 1254 |
| ApeKI | GCWGC | 4 cut(s) | 677, 692, 2227, 2748 |
| ApoI | RAATTY | 9 cut(s) | 176, 1926, 2100, 2616, 2624, 2679, 2697, 2912, 3233 |
| AsiGI | ACCGGT | 1 cut(s) | 2551 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1002, 1560, 1755 |
| AspLEI | GCGC | 2 cut(s) | 327, 1967 |
| AspS9I | GGNCC | 7 cut(s) | 57, 604, 711, 1205, 2009, 2010, 3309 |
| AsuHPI | GGTGA | 5 cut(s) | 133, 326, 626, 2532, 2950 |
| AvaII | GGWCC | 2 cut(s) | 57, 1205 |
| BaeGI | GKGCMC | 2 cut(s) | 1258, 2013 |
| BanI | GGYRCC | 1 cut(s) | 805 |
| BanII | GRGCYC | 4 cut(s) | 1317, 2013, 3075, 3391 |
| BauI | CACGAG | 3 cut(s) | 831, 2631, 2775 |
| BbrPI | CACGTG | 1 cut(s) | 2936 |
| BbsI | GAAGAC | 2 cut(s) | 846, 1743 |
| Bbv12I | GWGCWC | 6 cut(s) | 1258, 1317, 2507, 2941, 3065, 3075 |
| BbvI | GCAGC | 4 cut(s) | 689, 704, 2214, 2735 |
| BccI | CCATC | 7 cut(s) | 17, 73, 177, 722, 2081, 2458, 2842 |
| BceAI | ACGGC | 4 cut(s) | 2166, 2274, 2949, 3285 |
| BciT130I | CCWGG | 2 cut(s) | 608, 2345 |
| BciVI | GTATCC | 1 cut(s) | 313 |
| BcoDI | GTCTC | 7 cut(s) | 371, 1655, 1773, 2189, 2316, 2421, 2749 |
| BcuI | ACTAGT | 1 cut(s) | 2026 |
| BfaI | CTAG | 3 cut(s) | 1377, 1733, 2027 |
| BfmI | CTRYAG | 2 cut(s) | 2228, 2495 |
| BfrI | CTTAAG | 2 cut(s) | 848, 2297 |
| BfuAI | ACCTGC | 1 cut(s) | 2969 |
| BfuI | GTATCC | 1 cut(s) | 313 |
| BglII | AGATCT | 1 cut(s) | 1432 |
| BisI | GCNGC | 6 cut(s) | 678, 693, 2228, 2749, 2871, 3197 |
| BlpI | GCTNAGC | 1 cut(s) | 3069 |
| BlsI | GCNGC | 6 cut(s) | 679, 694, 2229, 2750, 2872, 3198 |
| Bme1390I | CCNGG | 2 cut(s) | 608, 2345 |
| Bme18I | GGWCC | 2 cut(s) | 57, 1205 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2329 |
| BmgT120I | GGNCC | 7 cut(s) | 57, 604, 711, 1205, 2009, 2010, 3309 |
| BmiI | GGNNCC | 4 cut(s) | 46, 247, 807, 2011 |
| BmrFI | CCNGG | 2 cut(s) | 608, 2345 |
| BmsI | GCATC | 6 cut(s) | 494, 1456, 1710, 1804, 1872, 3183 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1765 |
| BpiI | GAAGAC | 2 cut(s) | 846, 1743 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 220, 252 |
| BpmI | CTGGAG | 2 cut(s) | 1206, 2501 |
| Bpu10I | CCTNAGC | 1 cut(s) | 632 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3069 |
| BpuEI | CTTGAG | 1 cut(s) | 1850 |
| BsaAI | YACGTR | 2 cut(s) | 1349, 2936 |
| BsaBI | GATNNNNATC | 2 cut(s) | 8, 2490 |
| BsaJI | CCNNGG | 3 cut(s) | 112, 219, 3301 |
| BsaWI | WCCGGW | 2 cut(s) | 1841, 2551 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1005, 1035, 3166, 3196 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 54, 113, 118, 242, 1129, 1990, 2177 |
| Bse118I | RCCGGY | 1 cut(s) | 2551 |
| Bse1I | ACTGG | 4 cut(s) | 1984, 2404, 2749, 2957 |
| Bse8I | GATNNNNATC | 2 cut(s) | 8, 2490 |
| BseBI | CCWGG | 2 cut(s) | 608, 2345 |
| BseDI | CCNNGG | 3 cut(s) | 112, 219, 3301 |
| BseJI | GATNNNNATC | 2 cut(s) | 8, 2490 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 54, 113, 118, 242, 1129, 1990, 2177 |
| BseMII | CTCAG | 7 cut(s) | 63, 218, 293, 732, 2224, 2397, 3060 |
| BseNI | ACTGG | 4 cut(s) | 1984, 2404, 2749, 2957 |
| BseRI | GAGGAG | 4 cut(s) | 37, 185, 2535, 3255 |
| BseSI | GKGCMC | 2 cut(s) | 1258, 2013 |
| BseXI | GCAGC | 4 cut(s) | 689, 704, 2214, 2735 |
| BseYI | CCCAGC | 1 cut(s) | 3261 |
| BsgI | GTGCAG | 2 cut(s) | 1999, 2916 |
| Bsh1236I | CGCG | 2 cut(s) | 325, 1967 |
| BshNI | GGYRCC | 1 cut(s) | 805 |
| BshTI | ACCGGT | 1 cut(s) | 2551 |
| BsiHKAI | GWGCWC | 6 cut(s) | 1258, 1317, 2507, 2941, 3065, 3075 |
| BsiSI | CCGG | 5 cut(s) | 581, 1842, 1896, 2552, 2752 |
| BslFI | GGGAC | 1 cut(s) | 3041 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 54, 113, 118, 242, 1129, 1990, 2177 |
| BsmAI | GTCTC | 7 cut(s) | 371, 1655, 1773, 2189, 2316, 2421, 2749 |
| BsmBI | CGTCTC | 1 cut(s) | 2189 |
| BsmFI | GGGAC | 1 cut(s) | 3041 |
| BsmI | GAATGC | 1 cut(s) | 3116 |
| Bsp120I | GGGCCC | 1 cut(s) | 2009 |
| Bsp1286I | GDGCHC | 8 cut(s) | 1258, 1317, 2013, 2507, 2941, 3065, 3075, 3391 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3069 |
| Bsp19I | CCATGG | 1 cut(s) | 219 |
| BspACI | CCGC | 6 cut(s) | 60, 109, 584, 1967, 2870, 3197 |
| BspCNI | CTCAG | 7 cut(s) | 62, 219, 294, 731, 2223, 2396, 3061 |
| BspFNI | CGCG | 2 cut(s) | 325, 1967 |
| BspLI | GGNNCC | 4 cut(s) | 46, 247, 807, 2011 |
| BspMAI | CTGCAG | 1 cut(s) | 2232 |
| BspMI | ACCTGC | 1 cut(s) | 2969 |
| BspPI | GGATC | 9 cut(s) | 231, 572, 1058, 1435, 1551, 2255, 2283, 2355, 2493 |
| BspQI | GCTCTTC | 2 cut(s) | 1322, 2979 |
| BspT107I | GGYRCC | 1 cut(s) | 805 |
| BspTI | CTTAAG | 2 cut(s) | 848, 2297 |
| BsrFI | RCCGGY | 1 cut(s) | 2551 |
| BsrI | ACTGG | 4 cut(s) | 1984, 2404, 2749, 2957 |
| BssAI | RCCGGY | 1 cut(s) | 2551 |
| BssECI | CCNNGG | 3 cut(s) | 112, 219, 3301 |
| BssSI | CACGAG | 3 cut(s) | 831, 2631, 2775 |
| BssT1I | CCWWGG | 1 cut(s) | 219 |
| Bst2BI | CACGAG | 3 cut(s) | 831, 2631, 2775 |
| Bst2UI | CCWGG | 2 cut(s) | 608, 2345 |
| Bst4CI | ACNGT | 7 cut(s) | 1170, 1697, 1800, 1936, 2499, 3136, 3166 |
| Bst6I | CTCTTC | 7 cut(s) | 256, 262, 268, 1322, 2804, 2813, 2979 |
| BstAFI | CTTAAG | 2 cut(s) | 848, 2297 |
| BstBAI | YACGTR | 2 cut(s) | 1349, 2936 |
| BstC8I | GCNNGC | 3 cut(s) | 43, 628, 1819 |
| BstDSI | CCRYGG | 2 cut(s) | 219, 3301 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 52, 116 |
| BstFNI | CGCG | 2 cut(s) | 325, 1967 |
| BstHHI | GCGC | 2 cut(s) | 327, 1967 |
| BstMAI | GTCTC | 7 cut(s) | 371, 1655, 1773, 2189, 2316, 2421, 2749 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 482 |
| BstNI | CCWGG | 2 cut(s) | 608, 2345 |
| BstNSI | RCATGY | 3 cut(s) | 66, 1578, 2605 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1765 |
| BstSCI | CCNGG | 2 cut(s) | 606, 2343 |
| BstSFI | CTRYAG | 2 cut(s) | 2228, 2495 |
| BstSLI | GKGCMC | 2 cut(s) | 1258, 2013 |
| BstSNI | TACGTA | 1 cut(s) | 1349 |
| BstUI | CGCG | 2 cut(s) | 325, 1967 |
| BstV1I | GCAGC | 4 cut(s) | 689, 704, 2214, 2735 |
| BstV2I | GAAGAC | 2 cut(s) | 846, 1743 |
| BstX2I | RGATCY | 7 cut(s) | 223, 577, 1063, 1432, 2275, 2347, 2485 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 20 |
| BstYI | RGATCY | 7 cut(s) | 223, 577, 1063, 1432, 2275, 2347, 2485 |
| BsuI | GTATCC | 1 cut(s) | 313 |
| BtgI | CCRYGG | 2 cut(s) | 219, 3301 |
| BtsI | GCAGTG | 2 cut(s) | 2358, 2758 |
| BtsIMutI | CAGTG | 6 cut(s) | 57, 1702, 2358, 2397, 2504, 2758 |
| BveI | ACCTGC | 1 cut(s) | 2969 |
| Cac8I | GCNNGC | 3 cut(s) | 43, 628, 1819 |
| CfoI | GCGC | 2 cut(s) | 327, 1967 |
| Cfr10I | RCCGGY | 1 cut(s) | 2551 |
| Cfr13I | GGNCC | 7 cut(s) | 57, 604, 711, 1205, 2009, 2010, 3309 |
| CseI | GACGC | 1 cut(s) | 881 |
| Csp6I | GTAC | 1 cut(s) | 2447 |
| CspAI | ACCGGT | 1 cut(s) | 2551 |
| CviQI | GTAC | 1 cut(s) | 2447 |
| DraI | TTTAAA | 1 cut(s) | 1585 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2329 |
| EaeI | YGGCCR | 2 cut(s) | 28, 2179 |
| Eam1104I | CTCTTC | 7 cut(s) | 256, 262, 268, 1322, 2804, 2813, 2979 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2329 |
| EarI | CTCTTC | 7 cut(s) | 256, 262, 268, 1322, 2804, 2813, 2979 |
| EciI | GGCGGA | 1 cut(s) | 599 |
| Ecl136II | GAGCTC | 2 cut(s) | 1315, 3073 |
| Eco105I | TACGTA | 1 cut(s) | 1349 |
| Eco130I | CCWWGG | 1 cut(s) | 219 |
| Eco147I | AGGCCT | 1 cut(s) | 1673 |
| Eco24I | GRGCYC | 4 cut(s) | 1317, 2013, 3075, 3391 |
| Eco47I | GGWCC | 2 cut(s) | 57, 1205 |
| Eco53kI | GAGCTC | 2 cut(s) | 1315, 3073 |
| Eco57I | CTGAAG | 3 cut(s) | 292, 2928, 3344 |
| Eco72I | CACGTG | 1 cut(s) | 2936 |
| EcoICRI | GAGCTC | 2 cut(s) | 1315, 3073 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 52, 116 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2010 |
| EcoRI | GAATTC | 2 cut(s) | 2100, 2912 |
| EcoRII | CCWGG | 2 cut(s) | 606, 2343 |
| EcoT14I | CCWWGG | 1 cut(s) | 219 |
| EcoT22I | ATGCAT | 3 cut(s) | 487, 1471, 1725 |
| EcoT38I | GRGCYC | 4 cut(s) | 1317, 2013, 3075, 3391 |
| ErhI | CCWWGG | 1 cut(s) | 219 |
| Esp3I | CGTCTC | 1 cut(s) | 2189 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 485, 517, 635, 667, 831, 863, 1548, 1580 |
| FaqI | GGGAC | 1 cut(s) | 3041 |
| FauI | CCCGC | 1 cut(s) | 116 |
| FblI | GTMKAC | 1 cut(s) | 1795 |
| Fnu4HI | GCNGC | 6 cut(s) | 678, 693, 2228, 2749, 2871, 3197 |
| FriOI | GRGCYC | 4 cut(s) | 1317, 2013, 3075, 3391 |
| Fsp4HI | GCNGC | 6 cut(s) | 678, 693, 2228, 2749, 2871, 3197 |
| FspBI | CTAG | 3 cut(s) | 1377, 1733, 2027 |
| GlaI | GCGC | 2 cut(s) | 326, 1966 |
| GluI | GCNGC | 6 cut(s) | 678, 693, 2228, 2749, 2871, 3197 |
| GsaI | CCCAGC | 1 cut(s) | 3265 |
| GsuI | CTGGAG | 2 cut(s) | 1206, 2501 |
| HapII | CCGG | 5 cut(s) | 581, 1842, 1896, 2552, 2752 |
| HgaI | GACGC | 1 cut(s) | 881 |
| HhaI | GCGC | 2 cut(s) | 327, 1967 |
| Hin6I | GCGC | 2 cut(s) | 325, 1965 |
| HinP1I | GCGC | 2 cut(s) | 325, 1965 |
| HincII | GTYRAC | 4 cut(s) | 364, 2294, 2803, 2880 |
| HindII | GTYRAC | 4 cut(s) | 364, 2294, 2803, 2880 |
| HindIII | AAGCTT | 4 cut(s) | 1305, 1900, 2125, 3326 |
| HpaI | GTTAAC | 1 cut(s) | 364 |
| HpaII | CCGG | 5 cut(s) | 581, 1842, 1896, 2552, 2752 |
| HphI | GGTGA | 5 cut(s) | 133, 326, 626, 2532, 2950 |
| HpyCH4III | ACNGT | 7 cut(s) | 1170, 1697, 1800, 1936, 2499, 3136, 3166 |
| HpyCH4IV | ACGT | 6 cut(s) | 1348, 1387, 1824, 1886, 2476, 2935 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 482 |
| HpySE526I | ACGT | 6 cut(s) | 1348, 1387, 1824, 1886, 2476, 2935 |
| HspAI | GCGC | 2 cut(s) | 325, 1965 |
| KspAI | GTTAAC | 1 cut(s) | 364 |
| LguI | GCTCTTC | 2 cut(s) | 1322, 2979 |
| LmnI | GCTCC | 4 cut(s) | 50, 245, 880, 2140 |
| Lsp1109I | GCAGC | 4 cut(s) | 689, 704, 2214, 2735 |
| LweI | GCATC | 6 cut(s) | 494, 1456, 1710, 1804, 1872, 3183 |
| MaeI | CTAG | 3 cut(s) | 1377, 1733, 2027 |
| MaeII | ACGT | 6 cut(s) | 1348, 1387, 1824, 1886, 2476, 2935 |
| MfeI | CAATTG | 3 cut(s) | 621, 1160, 3022 |
| MflI | RGATCY | 7 cut(s) | 223, 577, 1063, 1432, 2275, 2347, 2485 |
| MhlI | GDGCHC | 8 cut(s) | 1258, 1317, 2013, 2507, 2941, 3065, 3075, 3391 |
| MlyI | GAGTC | 4 cut(s) | 1775, 2014, 2875, 3276 |
| MmeI | TCCRAC | 3 cut(s) | 2368, 2549, 2715 |
| Mph1103I | ATGCAT | 3 cut(s) | 487, 1471, 1725 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1002, 1560, 1755 |
| MslI | CAYNNNNRTG | 1 cut(s) | 18 |
| MspA1I | CMGCKG | 1 cut(s) | 972 |
| MspCI | CTTAAG | 2 cut(s) | 848, 2297 |
| MspI | CCGG | 5 cut(s) | 581, 1842, 1896, 2552, 2752 |
| MspR9I | CCNGG | 2 cut(s) | 608, 2345 |
| MunI | CAATTG | 3 cut(s) | 621, 1160, 3022 |
| Mva1269I | GAATGC | 1 cut(s) | 3116 |
| MvaI | CCWGG | 2 cut(s) | 608, 2345 |
| MvnI | CGCG | 2 cut(s) | 325, 1967 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 482 |
| NcoI | CCATGG | 1 cut(s) | 219 |
| NlaIV | GGNNCC | 4 cut(s) | 46, 247, 807, 2011 |
| NmuCI | GTSAC | 6 cut(s) | 121, 1075, 1589, 1628, 1697, 2197 |
| NsiI | ATGCAT | 3 cut(s) | 487, 1471, 1725 |
| NspI | RCATGY | 3 cut(s) | 66, 1578, 2605 |
| OliI | CACNNNNGTG | 1 cut(s) | 18 |
| PacI | TTAATTAA | 1 cut(s) | 1680 |
| PaqCI | CACCTGC | 1 cut(s) | 2969 |
| PceI | AGGCCT | 1 cut(s) | 1673 |
| PciSI | GCTCTTC | 2 cut(s) | 1322, 2979 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2193 |
| PctI | GAATGC | 1 cut(s) | 3116 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1002, 1560, 1755 |
| PflFI | GACNNNGTC | 1 cut(s) | 3134 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1129 |
| PinAI | ACCGGT | 1 cut(s) | 2551 |
| PkrI | GCNGC | 6 cut(s) | 679, 694, 2229, 2750, 2872, 3198 |
| PleI | GAGTC | 4 cut(s) | 1774, 2014, 2875, 3275 |
| PmaCI | CACGTG | 1 cut(s) | 2936 |
| PmlI | CACGTG | 1 cut(s) | 2936 |
| PpsI | GAGTC | 4 cut(s) | 1774, 2014, 2875, 3275 |
| Ppu21I | YACGTR | 2 cut(s) | 1349, 2936 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1765 |
| Psp124BI | GAGCTC | 2 cut(s) | 1317, 3075 |
| Psp1406I | AACGTT | 1 cut(s) | 1886 |
| Psp6I | CCWGG | 2 cut(s) | 606, 2343 |
| PspCI | CACGTG | 1 cut(s) | 2936 |
| PspFI | CCCAGC | 1 cut(s) | 3261 |
| PspGI | CCWGG | 2 cut(s) | 606, 2343 |
| PspN4I | GGNNCC | 4 cut(s) | 46, 247, 807, 2011 |
| PspOMI | GGGCCC | 1 cut(s) | 2009 |
| PspPI | GGNCC | 7 cut(s) | 57, 604, 711, 1205, 2009, 2010, 3309 |
| PstI | CTGCAG | 1 cut(s) | 2232 |
| PsuI | RGATCY | 7 cut(s) | 223, 577, 1063, 1432, 2275, 2347, 2485 |
| PsyI | GACNNNGTC | 1 cut(s) | 3134 |
| PvuII | CAGCTG | 1 cut(s) | 972 |
| RsaI | GTAC | 1 cut(s) | 2448 |
| RsaNI | GTAC | 1 cut(s) | 2447 |
| RseI | CAYNNNNRTG | 1 cut(s) | 18 |
| SacI | GAGCTC | 2 cut(s) | 1317, 3075 |
| SapI | GCTCTTC | 2 cut(s) | 1322, 2979 |
| SatI | GCNGC | 6 cut(s) | 678, 693, 2228, 2749, 2871, 3197 |
| Sau96I | GGNCC | 7 cut(s) | 57, 604, 711, 1205, 2009, 2010, 3309 |
| SchI | GAGTC | 4 cut(s) | 1775, 2014, 2875, 3276 |
| ScrFI | CCNGG | 2 cut(s) | 608, 2345 |
| SduI | GDGCHC | 8 cut(s) | 1258, 1317, 2013, 2507, 2941, 3065, 3075, 3391 |
| SfaNI | GCATC | 6 cut(s) | 494, 1456, 1710, 1804, 1872, 3183 |
| SfcI | CTRYAG | 2 cut(s) | 2228, 2495 |
| SinI | GGWCC | 2 cut(s) | 57, 1205 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 18 |
| SmlI | CTYRAG | 3 cut(s) | 848, 1829, 2297 |
| SmoI | CTYRAG | 3 cut(s) | 848, 1829, 2297 |
| SnaBI | TACGTA | 1 cut(s) | 1349 |
| SpeI | ACTAGT | 1 cut(s) | 2026 |
| SseBI | AGGCCT | 1 cut(s) | 1673 |
| SsiI | CCGC | 6 cut(s) | 60, 109, 584, 1967, 2870, 3197 |
| SspMI | CTAG | 3 cut(s) | 1377, 1733, 2027 |
| SstI | GAGCTC | 2 cut(s) | 1317, 3075 |
| StuI | AGGCCT | 1 cut(s) | 1673 |
| StyD4I | CCNGG | 2 cut(s) | 606, 2343 |
| StyI | CCWWGG | 1 cut(s) | 219 |
| TaaI | ACNGT | 7 cut(s) | 1170, 1697, 1800, 1936, 2499, 3136, 3166 |
| TaiI | ACGT | 6 cut(s) | 1351, 1390, 1827, 1889, 2479, 2938 |
| TaqI | TCGA | 6 cut(s) | 432, 1759, 2187, 2453, 2656, 3279 |
| TaqII | GACCGA | 1 cut(s) | 2717 |
| TauI | GCSGC | 2 cut(s) | 2873, 3199 |
| TscAI | CASTG | 6 cut(s) | 57, 1702, 2365, 2404, 2504, 2765 |
| TseFI | GTSAC | 6 cut(s) | 121, 1075, 1589, 1628, 1697, 2197 |
| TseI | GCWGC | 4 cut(s) | 677, 692, 2227, 2748 |
| Tsp45I | GTSAC | 6 cut(s) | 121, 1075, 1589, 1628, 1697, 2197 |
| TspGWI | ACGGA | 3 cut(s) | 448, 1395, 3111 |
| TspRI | CASTG | 6 cut(s) | 57, 1702, 2365, 2404, 2504, 2765 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3134 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1129 |
| Vha464I | CTTAAG | 2 cut(s) | 848, 2297 |
| VneI | GTGCAC | 1 cut(s) | 1254 |
| VpaK11BI | GGWCC | 2 cut(s) | 57, 1205 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 52, 116 |
| XapI | RAATTY | 9 cut(s) | 176, 1926, 2100, 2616, 2624, 2679, 2697, 2912, 3233 |
| XbaI | TCTAGA | 1 cut(s) | 1732 |
| XceI | RCATGY | 3 cut(s) | 66, 1578, 2605 |
| XmiI | GTMKAC | 1 cut(s) | 1795 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1002, 1560, 1755 |
| XspI | CTAG | 3 cut(s) | 1377, 1733, 2027 |
| Zsp2I | ATGCAT | 3 cut(s) | 487, 1471, 1725 |