TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 23 - 191 | 3.7e-55 | TIR domain |
| TIR_2 | PF13676 | 25 - 121 | 8.2e-15 | TIR domain |
| NB-ARC | PF00931 | 207 - 375 | 2.9e-16 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 446 - 515 | 1.2e-14 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 699 - 787 | 2.2e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 704 - 787 | 4e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_13 | PF23286 | 838 - 933 | 6.6e-10 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1490, 1718 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2279 |
| AccI | GTMKAC | 3 cut(s) | 1228, 1544, 3016 |
| AccII | CGCG | 3 cut(s) | 1083, 2570, 3298 |
| AciI | CCGC | 6 cut(s) | 507, 1417, 1771, 1796, 1861, 2197 |
| AclI | AACGTT | 1 cut(s) | 784 |
| AcoI | YGGCCR | 2 cut(s) | 3, 338 |
| AcuI | CTGAAG | 2 cut(s) | 2348, 2409 |
| AdeI | CACNNNGTG | 1 cut(s) | 2279 |
| AfaI | GTAC | 4 cut(s) | 624, 1236, 1999, 3159 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 276, 800, 1192, 2023, 2027, 2133, 2279, 2377 |
| AflIII | ACRYGT | 1 cut(s) | 3296 |
| AgeI | ACCGGT | 2 cut(s) | 1231, 3494 |
| AjnI | CCWGG | 5 cut(s) | 1064, 1552, 1980, 2089, 2877 |
| Alw21I | GWGCWC | 3 cut(s) | 976, 1098, 2141 |
| Alw26I | GTCTC | 3 cut(s) | 898, 2446, 2839 |
| Alw44I | GTGCAC | 1 cut(s) | 2137 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1553, 2492 |
| Ama87I | CYCGRG | 1 cut(s) | 502 |
| AoxI | GGCC | 4 cut(s) | 3, 338, 1183, 1194 |
| ApaLI | GTGCAC | 1 cut(s) | 2137 |
| ApeKI | GCWGC | 6 cut(s) | 461, 476, 996, 1857, 2685, 3229 |
| AseI | ATTAAT | 2 cut(s) | 2250, 3333 |
| AsiGI | ACCGGT | 2 cut(s) | 1231, 3494 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 207, 294, 1287, 2060, 2394 |
| AspLEI | GCGC | 2 cut(s) | 420, 2509 |
| AspS9I | GGNCC | 5 cut(s) | 1195, 2014, 2109, 2476, 3376 |
| AsuC2I | CCSGG | 3 cut(s) | 503, 504, 2531 |
| AsuHPI | GGTGA | 3 cut(s) | 1568, 3484, 3509 |
| AsuII | TTCGAA | 1 cut(s) | 2771 |
| AvaI | CYCGRG | 1 cut(s) | 502 |
| AvaII | GGWCC | 4 cut(s) | 2014, 2109, 2476, 3376 |
| BaeGI | GKGCMC | 1 cut(s) | 2141 |
| BalI | TGGCCA | 2 cut(s) | 5, 340 |
| BamHI | GGATCC | 3 cut(s) | 358, 2030, 2540 |
| BanII | GRGCYC | 1 cut(s) | 1098 |
| BauI | CACGAG | 1 cut(s) | 618 |
| BbsI | GAAGAC | 4 cut(s) | 710, 1385, 3349, 3408 |
| Bbv12I | GWGCWC | 3 cut(s) | 976, 1098, 2141 |
| BbvI | GCAGC | 6 cut(s) | 473, 488, 1008, 1869, 2672, 3216 |
| BccI | CCATC | 9 cut(s) | 14, 447, 1253, 1310, 1510, 2222, 2236, 2863, 3255 |
| BceAI | ACGGC | 1 cut(s) | 2221 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1750, 1784, 2677, 2711 |
| BciT130I | CCWGG | 5 cut(s) | 1066, 1554, 1982, 2091, 2879 |
| BciVI | GTATCC | 1 cut(s) | 91 |
| BclI | TGATCA | 1 cut(s) | 3094 |
| BcnI | CCSGG | 3 cut(s) | 503, 504, 2531 |
| BcoDI | GTCTC | 3 cut(s) | 898, 2446, 2839 |
| BfaI | CTAG | 9 cut(s) | 537, 806, 842, 1199, 1256, 1403, 1508, 1835, 2594 |
| BfmI | CTRYAG | 5 cut(s) | 1545, 1653, 2302, 2686, 3426 |
| BfoI | RGCGCY | 2 cut(s) | 421, 2510 |
| BfuI | GTATCC | 1 cut(s) | 91 |
| BglII | AGATCT | 1 cut(s) | 2293 |
| BisI | GCNGC | 8 cut(s) | 462, 477, 997, 1858, 1861, 2198, 2686, 3230 |
| BlsI | GCNGC | 8 cut(s) | 463, 478, 998, 1859, 1862, 2199, 2687, 3231 |
| Bme1390I | CCNGG | 8 cut(s) | 503, 504, 1066, 1554, 1982, 2091, 2531, 2879 |
| Bme18I | GGWCC | 4 cut(s) | 2014, 2109, 2476, 3376 |
| BmeT110I | CYCGRG | 1 cut(s) | 502 |
| BmgT120I | GGNCC | 5 cut(s) | 1195, 2014, 2109, 2476, 3376 |
| BmiI | GGNNCC | 8 cut(s) | 360, 2032, 2111, 2270, 2478, 2542, 2976, 3377 |
| BmrFI | CCNGG | 8 cut(s) | 503, 504, 1066, 1554, 1982, 2091, 2531, 2879 |
| BmsI | GCATC | 7 cut(s) | 275, 1585, 1638, 1872, 2316, 2594, 2652 |
| BpiI | GAAGAC | 4 cut(s) | 710, 1385, 3349, 3408 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 448, 480 |
| BpmI | CTGGAG | 4 cut(s) | 1120, 2125, 2168, 2863 |
| Bpu14I | TTCGAA | 1 cut(s) | 2771 |
| BpuEI | CTTGAG | 2 cut(s) | 1164, 1693 |
| BpuMI | CCSGG | 3 cut(s) | 503, 504, 2531 |
| BsaBI | GATNNNNATC | 4 cut(s) | 174, 1047, 1755, 3180 |
| BsaJI | CCNNGG | 6 cut(s) | 182, 304, 363, 502, 1065, 2513 |
| BsaWI | WCCGGW | 2 cut(s) | 1231, 3494 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2836, 2866 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 276, 800, 1192, 2023, 2027, 2133, 2279, 2377 |
| Bse118I | RCCGGY | 2 cut(s) | 1231, 3494 |
| Bse1I | ACTGG | 6 cut(s) | 297, 602, 858, 1326, 2108, 2957 |
| Bse3DI | GCAATG | 2 cut(s) | 1353, 2222 |
| Bse8I | GATNNNNATC | 4 cut(s) | 174, 1047, 1755, 3180 |
| BseBI | CCWGG | 5 cut(s) | 1066, 1554, 1982, 2091, 2879 |
| BseDI | CCNNGG | 6 cut(s) | 182, 304, 363, 502, 1065, 2513 |
| BseJI | GATNNNNATC | 4 cut(s) | 174, 1047, 1755, 3180 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 276, 800, 1192, 2023, 2027, 2133, 2279, 2377 |
| BseMI | GCAATG | 2 cut(s) | 1353, 2222 |
| BseMII | CTCAG | 2 cut(s) | 71, 2942 |
| BseNI | ACTGG | 6 cut(s) | 297, 602, 858, 1326, 2108, 2957 |
| BseSI | GKGCMC | 1 cut(s) | 2141 |
| BseXI | GCAGC | 6 cut(s) | 473, 488, 1008, 1869, 2672, 3216 |
| BsgI | GTGCAG | 2 cut(s) | 543, 3215 |
| Bsh1236I | CGCG | 3 cut(s) | 1083, 2570, 3298 |
| BshFI | GGCC | 4 cut(s) | 5, 340, 1185, 1196 |
| BshTI | ACCGGT | 2 cut(s) | 1231, 3494 |
| BsiHKAI | GWGCWC | 3 cut(s) | 976, 1098, 2141 |
| BsiHKCI | CYCGRG | 1 cut(s) | 502 |
| BsiSI | CCGG | 5 cut(s) | 503, 969, 1232, 2530, 3495 |
| BslFI | GGGAC | 3 cut(s) | 2095, 2557, 3074 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 276, 800, 1192, 2023, 2027, 2133, 2279, 2377 |
| BsmAI | GTCTC | 3 cut(s) | 898, 2446, 2839 |
| BsmBI | CGTCTC | 1 cut(s) | 2446 |
| BsmFI | GGGAC | 3 cut(s) | 2095, 2557, 3074 |
| BsmI | GAATGC | 2 cut(s) | 1287, 2645 |
| BsnI | GGCC | 4 cut(s) | 5, 340, 1185, 1196 |
| BsoBI | CYCGRG | 1 cut(s) | 502 |
| Bsp119I | TTCGAA | 1 cut(s) | 2771 |
| Bsp1286I | GDGCHC | 3 cut(s) | 976, 1098, 2141 |
| Bsp1407I | TGTACA | 2 cut(s) | 622, 1997 |
| Bsp68I | TCGCGA | 1 cut(s) | 1083 |
| BspACI | CCGC | 6 cut(s) | 507, 1417, 1771, 1796, 1861, 2197 |
| BspANI | GGCC | 4 cut(s) | 5, 340, 1185, 1196 |
| BspCNI | CTCAG | 2 cut(s) | 72, 2941 |
| BspFNI | CGCG | 3 cut(s) | 1083, 2570, 3298 |
| BspLI | GGNNCC | 8 cut(s) | 360, 2032, 2111, 2270, 2478, 2542, 2976, 3377 |
| BspMAI | CTGCAG | 2 cut(s) | 2690, 3430 |
| BspT104I | TTCGAA | 1 cut(s) | 2771 |
| BsrDI | GCAATG | 2 cut(s) | 1353, 2222 |
| BsrFI | RCCGGY | 2 cut(s) | 1231, 3494 |
| BsrGI | TGTACA | 2 cut(s) | 622, 1997 |
| BsrI | ACTGG | 6 cut(s) | 297, 602, 858, 1326, 2108, 2957 |
| BssAI | RCCGGY | 2 cut(s) | 1231, 3494 |
| BssECI | CCNNGG | 6 cut(s) | 182, 304, 363, 502, 1065, 2513 |
| BssSI | CACGAG | 1 cut(s) | 618 |
| BssT1I | CCWWGG | 3 cut(s) | 182, 304, 2513 |
| Bst2BI | CACGAG | 1 cut(s) | 618 |
| Bst2UI | CCWGG | 5 cut(s) | 1066, 1554, 1982, 2091, 2879 |
| Bst4CI | ACNGT | 6 cut(s) | 1734, 1793, 2262, 2429, 3121, 3281 |
| Bst6I | CTCTTC | 3 cut(s) | 40, 1506, 2912 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1252, 1504 |
| BstAUI | TGTACA | 2 cut(s) | 622, 1997 |
| BstBI | TTCGAA | 1 cut(s) | 2771 |
| BstC8I | GCNNGC | 2 cut(s) | 509, 1248 |
| BstDEI | CTNAG | 7 cut(s) | 80, 643, 1153, 1844, 1972, 1988, 2928 |
| BstFNI | CGCG | 3 cut(s) | 1083, 2570, 3298 |
| BstH2I | RGCGCY | 2 cut(s) | 421, 2510 |
| BstHHI | GCGC | 2 cut(s) | 420, 2509 |
| BstMAI | GTCTC | 3 cut(s) | 898, 2446, 2839 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 1252, 1504, 1558, 2515, 3304, 3388 |
| BstNI | CCWGG | 5 cut(s) | 1066, 1554, 1982, 2091, 2879 |
| BstNSI | RCATGY | 1 cut(s) | 634 |
| BstSCI | CCNGG | 8 cut(s) | 501, 502, 1064, 1552, 1980, 2089, 2529, 2877 |
| BstSFI | CTRYAG | 5 cut(s) | 1545, 1653, 2302, 2686, 3426 |
| BstSLI | GKGCMC | 1 cut(s) | 2141 |
| BstUI | CGCG | 3 cut(s) | 1083, 2570, 3298 |
| BstV1I | GCAGC | 6 cut(s) | 473, 488, 1008, 1869, 2672, 3216 |
| BstV2I | GAAGAC | 4 cut(s) | 710, 1385, 3349, 3408 |
| BstX2I | RGATCY | 5 cut(s) | 358, 1984, 2030, 2293, 2540 |
| BstYI | RGATCY | 5 cut(s) | 358, 1984, 2030, 2293, 2540 |
| BsuI | GTATCC | 1 cut(s) | 91 |
| BsuRI | GGCC | 4 cut(s) | 5, 340, 1185, 1196 |
| BtsI | GCAGTG | 1 cut(s) | 2208 |
| BtsIMutI | CAGTG | 3 cut(s) | 795, 2208, 2490 |
| BtuMI | TCGCGA | 1 cut(s) | 1083 |
| Cac8I | GCNNGC | 2 cut(s) | 509, 1248 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1553, 2492 |
| CfoI | GCGC | 2 cut(s) | 420, 2509 |
| Cfr10I | RCCGGY | 2 cut(s) | 1231, 3494 |
| Cfr13I | GGNCC | 5 cut(s) | 1195, 2014, 2109, 2476, 3376 |
| Cfr9I | CCCGGG | 1 cut(s) | 502 |
| CseI | GACGC | 4 cut(s) | 968, 2559, 2906, 3287 |
| Csp6I | GTAC | 4 cut(s) | 623, 1235, 1998, 3158 |
| CspAI | ACCGGT | 2 cut(s) | 1231, 3494 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 2246, 2281, 2361, 2396 |
| CviQI | GTAC | 4 cut(s) | 623, 1235, 1998, 3158 |
| DdeI | CTNAG | 7 cut(s) | 80, 643, 1153, 1844, 1972, 1988, 2928 |
| DraI | TTTAAA | 1 cut(s) | 2007 |
| DraIII | CACNNNGTG | 1 cut(s) | 2279 |
| EaeI | YGGCCR | 2 cut(s) | 3, 338 |
| Eam1104I | CTCTTC | 3 cut(s) | 40, 1506, 2912 |
| EarI | CTCTTC | 3 cut(s) | 40, 1506, 2912 |
| Ecl136II | GAGCTC | 1 cut(s) | 1096 |
| Eco130I | CCWWGG | 3 cut(s) | 182, 304, 2513 |
| Eco147I | AGGCCT | 1 cut(s) | 1185 |
| Eco24I | GRGCYC | 1 cut(s) | 1098 |
| Eco32I | GATATC | 1 cut(s) | 2243 |
| Eco47I | GGWCC | 4 cut(s) | 2014, 2109, 2476, 3376 |
| Eco53kI | GAGCTC | 1 cut(s) | 1096 |
| Eco57I | CTGAAG | 2 cut(s) | 2348, 2409 |
| Eco88I | CYCGRG | 1 cut(s) | 502 |
| EcoICRI | GAGCTC | 1 cut(s) | 1096 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2109 |
| EcoRI | GAATTC | 1 cut(s) | 2495 |
| EcoRII | CCWGG | 5 cut(s) | 1064, 1552, 1980, 2089, 2877 |
| EcoRV | GATATC | 1 cut(s) | 2243 |
| EcoT14I | CCWWGG | 3 cut(s) | 182, 304, 2513 |
| EcoT22I | ATGCAT | 3 cut(s) | 671, 1500, 2645 |
| EcoT38I | GRGCYC | 1 cut(s) | 1098 |
| ErhI | CCWWGG | 3 cut(s) | 182, 304, 2513 |
| Esp3I | CGTCTC | 1 cut(s) | 2446 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 618, 650, 3453, 3485 |
| FaqI | GGGAC | 3 cut(s) | 2095, 2557, 3074 |
| FauI | CCCGC | 1 cut(s) | 500 |
| FauNDI | CATATG | 1 cut(s) | 796 |
| FbaI | TGATCA | 1 cut(s) | 3094 |
| FblI | GTMKAC | 3 cut(s) | 1228, 1544, 3016 |
| Fnu4HI | GCNGC | 8 cut(s) | 462, 477, 997, 1858, 1861, 2198, 2686, 3230 |
| FriOI | GRGCYC | 1 cut(s) | 1098 |
| Fsp4HI | GCNGC | 8 cut(s) | 462, 477, 997, 1858, 1861, 2198, 2686, 3230 |
| FspBI | CTAG | 9 cut(s) | 537, 806, 842, 1199, 1256, 1403, 1508, 1835, 2594 |
| GlaI | GCGC | 2 cut(s) | 419, 2508 |
| GluI | GCNGC | 8 cut(s) | 462, 477, 997, 1858, 1861, 2198, 2686, 3230 |
| GsuI | CTGGAG | 4 cut(s) | 1120, 2125, 2168, 2863 |
| HaeII | RGCGCY | 2 cut(s) | 421, 2510 |
| HaeIII | GGCC | 4 cut(s) | 5, 340, 1185, 1196 |
| HapII | CCGG | 5 cut(s) | 503, 969, 1232, 2530, 3495 |
| HgaI | GACGC | 4 cut(s) | 968, 2559, 2906, 3287 |
| HhaI | GCGC | 2 cut(s) | 420, 2509 |
| Hin6I | GCGC | 2 cut(s) | 418, 2507 |
| HinP1I | GCGC | 2 cut(s) | 418, 2507 |
| HincII | GTYRAC | 2 cut(s) | 2101, 3017 |
| HindII | GTYRAC | 2 cut(s) | 2101, 3017 |
| HindIII | AAGCTT | 3 cut(s) | 1990, 2042, 2711 |
| HpaII | CCGG | 5 cut(s) | 503, 969, 1232, 2530, 3495 |
| HphI | GGTGA | 3 cut(s) | 1568, 3484, 3509 |
| Hpy99I | CGWCG | 1 cut(s) | 2526 |
| HpyCH4III | ACNGT | 6 cut(s) | 1734, 1793, 2262, 2429, 3121, 3281 |
| HpyCH4IV | ACGT | 7 cut(s) | 369, 784, 1722, 1870, 2334, 2521, 3405 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 1252, 1504, 1558, 2515, 3304, 3388 |
| HpyF3I | CTNAG | 7 cut(s) | 80, 643, 1153, 1844, 1972, 1988, 2928 |
| HpySE526I | ACGT | 7 cut(s) | 369, 784, 1722, 1870, 2334, 2521, 3405 |
| HspAI | GCGC | 2 cut(s) | 418, 2507 |
| Ksp22I | TGATCA | 1 cut(s) | 3094 |
| LmnI | GCTCC | 3 cut(s) | 971, 2274, 2791 |
| Lsp1109I | GCAGC | 6 cut(s) | 473, 488, 1008, 1869, 2672, 3216 |
| LweI | GCATC | 7 cut(s) | 275, 1585, 1638, 1872, 2316, 2594, 2652 |
| MaeI | CTAG | 9 cut(s) | 537, 806, 842, 1199, 1256, 1403, 1508, 1835, 2594 |
| MaeII | ACGT | 7 cut(s) | 369, 784, 1722, 1870, 2334, 2521, 3405 |
| MaeIII | GTNAC | 6 cut(s) | 1412, 1773, 2362, 2429, 3254, 3325 |
| MfeI | CAATTG | 4 cut(s) | 11, 711, 735, 1107 |
| MflI | RGATCY | 5 cut(s) | 358, 1984, 2030, 2293, 2540 |
| MhlI | GDGCHC | 3 cut(s) | 976, 1098, 2141 |
| MlsI | TGGCCA | 2 cut(s) | 5, 340 |
| MluI | ACGCGT | 1 cut(s) | 3296 |
| MluNI | TGGCCA | 2 cut(s) | 5, 340 |
| MlyI | GAGTC | 8 cut(s) | 1550, 1684, 2378, 2426, 2841, 2910, 3221, 3333 |
| MmeI | TCCRAC | 5 cut(s) | 1355, 2008, 2423, 2715, 3195 |
| Mox20I | TGGCCA | 2 cut(s) | 5, 340 |
| Mph1103I | ATGCAT | 3 cut(s) | 671, 1500, 2645 |
| MroXI | GAANNNNTTC | 5 cut(s) | 207, 294, 1287, 2060, 2394 |
| MscI | TGGCCA | 2 cut(s) | 5, 340 |
| MslI | CAYNNNNRTG | 4 cut(s) | 516, 1219, 1221, 1584 |
| Msp20I | TGGCCA | 2 cut(s) | 5, 340 |
| MspA1I | CMGCKG | 1 cut(s) | 2991 |
| MspI | CCGG | 5 cut(s) | 503, 969, 1232, 2530, 3495 |
| MspR9I | CCNGG | 8 cut(s) | 503, 504, 1066, 1554, 1982, 2091, 2531, 2879 |
| MunI | CAATTG | 4 cut(s) | 11, 711, 735, 1107 |
| Mva1269I | GAATGC | 2 cut(s) | 1287, 2645 |
| MvaI | CCWGG | 5 cut(s) | 1066, 1554, 1982, 2091, 2879 |
| MvnI | CGCG | 3 cut(s) | 1083, 2570, 3298 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 1252, 1504, 1558, 2515, 3304, 3388 |
| NciI | CCSGG | 3 cut(s) | 503, 504, 2531 |
| NdeI | CATATG | 1 cut(s) | 796 |
| NlaIV | GGNNCC | 8 cut(s) | 360, 2032, 2111, 2270, 2478, 2542, 2976, 3377 |
| NmuCI | GTSAC | 4 cut(s) | 1412, 2429, 3254, 3325 |
| NruI | TCGCGA | 1 cut(s) | 1083 |
| NsiI | ATGCAT | 3 cut(s) | 671, 1500, 2645 |
| NspI | RCATGY | 1 cut(s) | 634 |
| NspV | TTCGAA | 1 cut(s) | 2771 |
| PceI | AGGCCT | 1 cut(s) | 1185 |
| PctI | GAATGC | 2 cut(s) | 1287, 2645 |
| PdmI | GAANNNNTTC | 5 cut(s) | 207, 294, 1287, 2060, 2394 |
| PflFI | GACNNNGTC | 1 cut(s) | 2850 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2279 |
| PfoI | TCCNGGA | 1 cut(s) | 1980 |
| PinAI | ACCGGT | 2 cut(s) | 1231, 3494 |
| PkrI | GCNGC | 8 cut(s) | 463, 478, 998, 1859, 1862, 2199, 2687, 3231 |
| PleI | GAGTC | 8 cut(s) | 1549, 1683, 2378, 2426, 2841, 2910, 3220, 3332 |
| PpsI | GAGTC | 8 cut(s) | 1549, 1683, 2378, 2426, 2841, 2910, 3220, 3332 |
| PpuMI | RGGWCCY | 1 cut(s) | 2109 |
| PshBI | ATTAAT | 2 cut(s) | 2250, 3333 |
| PsiI | TTATAA | 2 cut(s) | 1490, 1718 |
| Psp124BI | GAGCTC | 1 cut(s) | 1098 |
| Psp1406I | AACGTT | 1 cut(s) | 784 |
| Psp5II | RGGWCCY | 1 cut(s) | 2109 |
| Psp6I | CCWGG | 5 cut(s) | 1064, 1552, 1980, 2089, 2877 |
| PspGI | CCWGG | 5 cut(s) | 1064, 1552, 1980, 2089, 2877 |
| PspN4I | GGNNCC | 8 cut(s) | 360, 2032, 2111, 2270, 2478, 2542, 2976, 3377 |
| PspPI | GGNCC | 5 cut(s) | 1195, 2014, 2109, 2476, 3376 |
| PspPPI | RGGWCCY | 1 cut(s) | 2109 |
| PstI | CTGCAG | 2 cut(s) | 2690, 3430 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1553, 2492 |
| PsuI | RGATCY | 5 cut(s) | 358, 1984, 2030, 2293, 2540 |
| PsyI | GACNNNGTC | 1 cut(s) | 2850 |
| PvuII | CAGCTG | 1 cut(s) | 2991 |
| RruI | TCGCGA | 1 cut(s) | 1083 |
| RsaI | GTAC | 4 cut(s) | 624, 1236, 1999, 3159 |
| RsaNI | GTAC | 4 cut(s) | 623, 1235, 1998, 3158 |
| RseI | CAYNNNNRTG | 4 cut(s) | 516, 1219, 1221, 1584 |
| SacI | GAGCTC | 1 cut(s) | 1098 |
| SalI | GTCGAC | 1 cut(s) | 3015 |
| SatI | GCNGC | 8 cut(s) | 462, 477, 997, 1858, 1861, 2198, 2686, 3230 |
| Sau96I | GGNCC | 5 cut(s) | 1195, 2014, 2109, 2476, 3376 |
| SchI | GAGTC | 8 cut(s) | 1550, 1684, 2378, 2426, 2841, 2910, 3221, 3333 |
| ScrFI | CCNGG | 8 cut(s) | 503, 504, 1066, 1554, 1982, 2091, 2531, 2879 |
| SduI | GDGCHC | 3 cut(s) | 976, 1098, 2141 |
| SfaNI | GCATC | 7 cut(s) | 275, 1585, 1638, 1872, 2316, 2594, 2652 |
| SfcI | CTRYAG | 5 cut(s) | 1545, 1653, 2302, 2686, 3426 |
| SfuI | TTCGAA | 1 cut(s) | 2771 |
| SgrAI | CRCCGGYG | 1 cut(s) | 3494 |
| SinI | GGWCC | 4 cut(s) | 2014, 2109, 2476, 3376 |
| SmaI | CCCGGG | 1 cut(s) | 504 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 516, 1219, 1221, 1584 |
| SmlI | CTYRAG | 2 cut(s) | 1179, 1672 |
| SmoI | CTYRAG | 2 cut(s) | 1179, 1672 |
| SseBI | AGGCCT | 1 cut(s) | 1185 |
| SsiI | CCGC | 6 cut(s) | 507, 1417, 1771, 1796, 1861, 2197 |
| SspI | AATATT | 1 cut(s) | 2557 |
| SspMI | CTAG | 9 cut(s) | 537, 806, 842, 1199, 1256, 1403, 1508, 1835, 2594 |
| SstI | GAGCTC | 1 cut(s) | 1098 |
| StuI | AGGCCT | 1 cut(s) | 1185 |
| StyD4I | CCNGG | 8 cut(s) | 501, 502, 1064, 1552, 1980, 2089, 2529, 2877 |
| StyI | CCWWGG | 3 cut(s) | 182, 304, 2513 |
| TaaI | ACNGT | 6 cut(s) | 1734, 1793, 2262, 2429, 3121, 3281 |
| TaiI | ACGT | 7 cut(s) | 372, 787, 1725, 1873, 2337, 2524, 3408 |
| TaqI | TCGA | 8 cut(s) | 1350, 2441, 2524, 2771, 3016, 3168, 3189, 3322 |
| TatI | WGTACW | 3 cut(s) | 622, 1997, 3157 |
| TauI | GCSGC | 2 cut(s) | 1863, 2200 |
| TscAI | CASTG | 3 cut(s) | 795, 2215, 2497 |
| TseFI | GTSAC | 4 cut(s) | 1412, 2429, 3254, 3325 |
| TseI | GCWGC | 6 cut(s) | 461, 476, 996, 1857, 2685, 3229 |
| Tsp45I | GTSAC | 4 cut(s) | 1412, 2429, 3254, 3325 |
| TspGWI | ACGGA | 7 cut(s) | 1179, 2470, 3128, 3273, 3278, 3291, 3355 |
| TspMI | CCCGGG | 1 cut(s) | 502 |
| TspRI | CASTG | 3 cut(s) | 795, 2215, 2497 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2850 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2279 |
| VneI | GTGCAC | 1 cut(s) | 2137 |
| VpaK11BI | GGWCC | 4 cut(s) | 2014, 2109, 2476, 3376 |
| VspI | ATTAAT | 2 cut(s) | 2250, 3333 |
| XbaI | TCTAGA | 1 cut(s) | 2593 |
| XceI | RCATGY | 1 cut(s) | 634 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2024, 2727 |
| XmaI | CCCGGG | 1 cut(s) | 502 |
| XmiI | GTMKAC | 3 cut(s) | 1228, 1544, 3016 |
| XmnI | GAANNNNTTC | 5 cut(s) | 207, 294, 1287, 2060, 2394 |
| XspI | CTAG | 9 cut(s) | 537, 806, 842, 1199, 1256, 1403, 1508, 1835, 2594 |
| Zsp2I | ATGCAT | 3 cut(s) | 671, 1500, 2645 |