TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 8 - 112 | 1.7e-12 | NB-ARC domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 109 |
| AcuI | CTGAAG | 2 cut(s) | 204, 387 |
| AfaI | GTAC | 2 cut(s) | 369, 519 |
| AflIII | ACRYGT | 1 cut(s) | 373 |
| AgsI | TTSAA | 4 cut(s) | 63, 322, 512, 524 |
| AluBI | AGCT | 3 cut(s) | 302, 310, 407 |
| AluI | AGCT | 3 cut(s) | 302, 310, 407 |
| AoxI | GGCC | 2 cut(s) | 13, 394 |
| ApoI | RAATTY | 1 cut(s) | 109 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 341, 373 |
| AseI | ATTAAT | 1 cut(s) | 51 |
| AspS9I | GGNCC | 1 cut(s) | 277 |
| AsuHPI | GGTGA | 1 cut(s) | 212 |
| AsuII | TTCGAA | 1 cut(s) | 360 |
| AvaII | GGWCC | 1 cut(s) | 277 |
| BceAI | ACGGC | 1 cut(s) | 381 |
| BclI | TGATCA | 1 cut(s) | 216 |
| BmcAI | AGTACT | 1 cut(s) | 519 |
| Bme18I | GGWCC | 1 cut(s) | 277 |
| BmgT120I | GGNCC | 1 cut(s) | 277 |
| BmrI | ACTGGG | 1 cut(s) | 550 |
| BmuI | ACTGGG | 1 cut(s) | 550 |
| BpmI | CTGGAG | 2 cut(s) | 326, 330 |
| Bpu14I | TTCGAA | 1 cut(s) | 360 |
| BpuEI | CTTGAG | 1 cut(s) | 375 |
| Bse1I | ACTGG | 1 cut(s) | 545 |
| BseGI | GGATG | 2 cut(s) | 160, 550 |
| BseNI | ACTGG | 1 cut(s) | 545 |
| BshFI | GGCC | 2 cut(s) | 15, 396 |
| BsmI | GAATGC | 1 cut(s) | 328 |
| BsnI | GGCC | 2 cut(s) | 15, 396 |
| Bsp119I | TTCGAA | 1 cut(s) | 360 |
| Bsp143I | GATC | 1 cut(s) | 216 |
| BspANI | GGCC | 2 cut(s) | 15, 396 |
| BspT104I | TTCGAA | 1 cut(s) | 360 |
| BsrI | ACTGG | 1 cut(s) | 545 |
| BssMI | GATC | 1 cut(s) | 216 |
| Bst4CI | ACNGT | 1 cut(s) | 517 |
| Bst6I | CTCTTC | 1 cut(s) | 42 |
| BstBI | TTCGAA | 1 cut(s) | 360 |
| BstDEI | CTNAG | 1 cut(s) | 41 |
| BstF5I | GGATG | 2 cut(s) | 160, 550 |
| BstKTI | GATC | 1 cut(s) | 219 |
| BstMBI | GATC | 1 cut(s) | 216 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 483 |
| BsuRI | GGCC | 2 cut(s) | 15, 396 |
| BtsCI | GGATG | 2 cut(s) | 160, 550 |
| Cfr13I | GGNCC | 1 cut(s) | 277 |
| Csp6I | GTAC | 2 cut(s) | 368, 518 |
| CviAII | CATG | 2 cut(s) | 8, 553 |
| CviJI | RGCY | 8 cut(s) | 15, 99, 182, 302, 310, 383, 396, 407 |
| CviKI_1 | RGCY | 8 cut(s) | 15, 99, 182, 302, 310, 383, 396, 407 |
| CviQI | GTAC | 2 cut(s) | 368, 518 |
| DdeI | CTNAG | 1 cut(s) | 41 |
| DpnI | GATC | 1 cut(s) | 218 |
| DpnII | GATC | 1 cut(s) | 216 |
| Eam1104I | CTCTTC | 1 cut(s) | 42 |
| EarI | CTCTTC | 1 cut(s) | 42 |
| Eco147I | AGGCCT | 1 cut(s) | 15 |
| Eco47I | GGWCC | 1 cut(s) | 277 |
| Eco57I | CTGAAG | 2 cut(s) | 204, 387 |
| FaeI | CATG | 2 cut(s) | 11, 556 |
| FaiI | YATR | 9 cut(s) | 9, 104, 221, 255, 387, 419, 446, 464, 554 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 119, 151 |
| FatI | CATG | 2 cut(s) | 7, 552 |
| FbaI | TGATCA | 1 cut(s) | 216 |
| FokI | GGATG | 1 cut(s) | 167 |
| GsuI | CTGGAG | 2 cut(s) | 326, 330 |
| HaeIII | GGCC | 2 cut(s) | 15, 396 |
| Hin1II | CATG | 2 cut(s) | 11, 556 |
| HinfI | GANTC | 3 cut(s) | 130, 248, 479 |
| HphI | GGTGA | 1 cut(s) | 212 |
| Hpy188I | TCNGA | 1 cut(s) | 281 |
| Hpy188III | TCNNGA | 4 cut(s) | 143, 305, 347, 533 |
| Hpy99I | CGWCG | 1 cut(s) | 299 |
| HpyAV | CCTTC | 1 cut(s) | 411 |
| HpyCH4III | ACNGT | 1 cut(s) | 517 |
| HpyCH4IV | ACGT | 1 cut(s) | 373 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 486 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 483 |
| HpyF3I | CTNAG | 1 cut(s) | 41 |
| HpySE526I | ACGT | 1 cut(s) | 373 |
| Hsp92II | CATG | 2 cut(s) | 11, 556 |
| Ksp22I | TGATCA | 1 cut(s) | 216 |
| Kzo9I | GATC | 1 cut(s) | 216 |
| LmnI | GCTCC | 2 cut(s) | 163, 307 |
| LpnPI | CCDG | 4 cut(s) | 230, 290, 360, 526 |
| MaeII | ACGT | 1 cut(s) | 373 |
| MalI | GATC | 1 cut(s) | 218 |
| MboI | GATC | 1 cut(s) | 216 |
| MboII | GAAGA | 3 cut(s) | 29, 139, 345 |
| MluCI | AATT | 6 cut(s) | 109, 138, 158, 167, 352, 412 |
| MmeI | TCCRAC | 1 cut(s) | 46 |
| MnlI | CCTC | 5 cut(s) | 5, 111, 196, 230, 354 |
| MseI | TTAA | 7 cut(s) | 51, 137, 170, 261, 287, 314, 411 |
| Mva1269I | GAATGC | 1 cut(s) | 328 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 483 |
| NdeII | GATC | 1 cut(s) | 216 |
| NlaIII | CATG | 2 cut(s) | 11, 556 |
| NspV | TTCGAA | 1 cut(s) | 360 |
| PceI | AGGCCT | 1 cut(s) | 15 |
| PctI | GAATGC | 1 cut(s) | 328 |
| PfeI | GAWTC | 3 cut(s) | 130, 248, 479 |
| PshBI | ATTAAT | 1 cut(s) | 51 |
| PspPI | GGNCC | 1 cut(s) | 277 |
| RsaI | GTAC | 2 cut(s) | 369, 519 |
| RsaNI | GTAC | 2 cut(s) | 368, 518 |
| SaqAI | TTAA | 7 cut(s) | 51, 137, 170, 261, 287, 314, 411 |
| Sau3AI | GATC | 1 cut(s) | 216 |
| Sau96I | GGNCC | 1 cut(s) | 277 |
| ScaI | AGTACT | 1 cut(s) | 519 |
| SetI | ASST | 8 cut(s) | 279, 304, 312, 346, 376, 409, 424, 499 |
| SfuI | TTCGAA | 1 cut(s) | 360 |
| SinI | GGWCC | 1 cut(s) | 277 |
| SmlI | CTYRAG | 1 cut(s) | 390 |
| SmoI | CTYRAG | 1 cut(s) | 390 |
| Sse9I | AATT | 6 cut(s) | 109, 138, 158, 167, 352, 412 |
| SseBI | AGGCCT | 1 cut(s) | 15 |
| StuI | AGGCCT | 1 cut(s) | 15 |
| TaaI | ACNGT | 1 cut(s) | 517 |
| TaiI | ACGT | 1 cut(s) | 376 |
| TaqI | TCGA | 3 cut(s) | 68, 189, 360 |
| TasI | AATT | 6 cut(s) | 109, 138, 158, 167, 352, 412 |
| TatI | WGTACW | 1 cut(s) | 517 |
| TfiI | GAWTC | 3 cut(s) | 130, 248, 479 |
| Tru1I | TTAA | 7 cut(s) | 51, 137, 170, 261, 287, 314, 411 |
| Tru9I | TTAA | 7 cut(s) | 51, 137, 170, 261, 287, 314, 411 |
| TspDTI | ATGAA | 3 cut(s) | 171, 256, 354 |
| VpaK11BI | GGWCC | 1 cut(s) | 277 |
| VspI | ATTAAT | 1 cut(s) | 51 |
| XapI | RAATTY | 1 cut(s) | 109 |
| ZrmI | AGTACT | 1 cut(s) | 519 |