TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 65 - 222 | 2.4e-23 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 291 - 362 | 2.8e-16 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 577 - 656 | 5.7e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 626 - 796 | 4.3e-18 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_13 | PF23286 | 780 - 866 | 7.1e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 809 - 877 | 4.6e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 854 - 938 | 1.5e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 879 - 951 | 1.1e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 925 - 1096 | 1.8e-22 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 950 - 1009 | 3.2e-09 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 2436 |
| AccI | GTMKAC | 2 cut(s) | 178, 597 |
| AccIII | TCCGGA | 2 cut(s) | 2383, 3283 |
| AciI | CCGC | 6 cut(s) | 111, 704, 1826, 2341, 3241, 3523 |
| AclI | AACGTT | 1 cut(s) | 3300 |
| AclWI | GGATC | 6 cut(s) | 1548, 2040, 2514, 2727, 2940, 3394 |
| AcoI | YGGCCR | 2 cut(s) | 1337, 1914 |
| AcuI | CTGAAG | 1 cut(s) | 1495 |
| AdeI | CACNNNGTG | 1 cut(s) | 701 |
| AfaI | GTAC | 2 cut(s) | 1486, 1555 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1794, 2416, 3092 |
| AflIII | ACRYGT | 1 cut(s) | 1463 |
| AgeI | ACCGGT | 1 cut(s) | 66 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 185 |
| AhlI | ACTAGT | 2 cut(s) | 335, 3025 |
| AjiI | CACGTC | 1 cut(s) | 475 |
| AjnI | CCWGG | 3 cut(s) | 238, 684, 3314 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 144, 176, 1998, 2030 |
| Alw21I | GWGCWC | 1 cut(s) | 1268 |
| Alw26I | GTCTC | 9 cut(s) | 352, 372, 1290, 1721, 2362, 2422, 2635, 2848, 3262 |
| AlwI | GGATC | 6 cut(s) | 1548, 2040, 2514, 2727, 2940, 3394 |
| Ama87I | CYCGRG | 2 cut(s) | 114, 1097 |
| Aor13HI | TCCGGA | 2 cut(s) | 2383, 3283 |
| AoxI | GGCC | 6 cut(s) | 236, 526, 721, 921, 1337, 1914 |
| AsiGI | ACCGGT | 1 cut(s) | 66 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 653, 882 |
| AspS9I | GGNCC | 7 cut(s) | 69, 236, 527, 812, 1819, 3244, 3358 |
| AsuC2I | CCSGG | 4 cut(s) | 515, 1098, 1099, 2704 |
| AsuHPI | GGTGA | 7 cut(s) | 409, 923, 1077, 2314, 2692, 3023, 3214 |
| AvaI | CYCGRG | 2 cut(s) | 114, 1097 |
| AvaII | GGWCC | 5 cut(s) | 69, 812, 1819, 3244, 3358 |
| AxyI | CCTNAGG | 2 cut(s) | 816, 2411 |
| BalI | TGGCCA | 2 cut(s) | 1339, 1916 |
| BanII | GRGCYC | 1 cut(s) | 1268 |
| BbsI | GAAGAC | 2 cut(s) | 69, 2300 |
| Bbv12I | GWGCWC | 1 cut(s) | 1268 |
| BceAI | ACGGC | 1 cut(s) | 1837 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1358, 1392 |
| BciT130I | CCWGG | 3 cut(s) | 240, 686, 3316 |
| BclI | TGATCA | 2 cut(s) | 409, 622 |
| BcnI | CCSGG | 4 cut(s) | 515, 1098, 1099, 2704 |
| BcoDI | GTCTC | 9 cut(s) | 352, 372, 1290, 1721, 2362, 2422, 2635, 2848, 3262 |
| BcuI | ACTAGT | 2 cut(s) | 335, 3025 |
| BfaI | CTAG | 9 cut(s) | 336, 341, 794, 860, 1493, 1823, 2270, 3026, 3092 |
| BfmI | CTRYAG | 4 cut(s) | 304, 1414, 1668, 2192 |
| BlpI | GCTNAGC | 1 cut(s) | 2108 |
| Bme1390I | CCNGG | 7 cut(s) | 240, 515, 686, 1098, 1099, 2704, 3316 |
| Bme18I | GGWCC | 5 cut(s) | 69, 812, 1819, 3244, 3358 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 185 |
| BmeT110I | CYCGRG | 2 cut(s) | 114, 1097 |
| BmgBI | CACGTC | 1 cut(s) | 475 |
| BmgT120I | GGNCC | 7 cut(s) | 69, 236, 527, 812, 1819, 3244, 3358 |
| BmiI | GGNNCC | 5 cut(s) | 237, 751, 1572, 3245, 3545 |
| BmrFI | CCNGG | 7 cut(s) | 240, 515, 686, 1098, 1099, 2704, 3316 |
| BmrI | ACTGGG | 1 cut(s) | 2925 |
| BmuI | ACTGGG | 1 cut(s) | 2925 |
| BoxI | GACNNNNGTC | 2 cut(s) | 364, 477 |
| BpiI | GAAGAC | 2 cut(s) | 69, 2300 |
| BplI | GAGNNNNNCTC | 3 cut(s) | 36, 3329, 3361 |
| BpmI | CTGGAG | 3 cut(s) | 1314, 2386, 3353 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2108 |
| BpuEI | CTTGAG | 4 cut(s) | 1721, 1759, 2659, 2872 |
| BpuMI | CCSGG | 4 cut(s) | 515, 1098, 1099, 2704 |
| BsaBI | GATNNNNATC | 2 cut(s) | 621, 2031 |
| BsaJI | CCNNGG | 8 cut(s) | 513, 718, 1097, 1098, 1454, 2374, 3274, 3315 |
| BsaWI | WCCGGW | 3 cut(s) | 66, 2383, 3283 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1794, 2416, 3092 |
| Bse118I | RCCGGY | 1 cut(s) | 66 |
| Bse21I | CCTNAGG | 2 cut(s) | 816, 2411 |
| Bse3DI | GCAATG | 2 cut(s) | 1361, 1621 |
| Bse8I | GATNNNNATC | 2 cut(s) | 621, 2031 |
| BseAI | TCCGGA | 2 cut(s) | 2383, 3283 |
| BseBI | CCWGG | 3 cut(s) | 240, 686, 3316 |
| BseDI | CCNNGG | 8 cut(s) | 513, 718, 1097, 1098, 1454, 2374, 3274, 3315 |
| BseJI | GATNNNNATC | 2 cut(s) | 621, 2031 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1794, 2416, 3092 |
| BseMI | GCAATG | 2 cut(s) | 1361, 1621 |
| BseMII | CTCAG | 3 cut(s) | 830, 1245, 3542 |
| BseRI | GAGGAG | 2 cut(s) | 791, 3350 |
| BseYI | CCCAGC | 2 cut(s) | 2259, 3159 |
| BsgI | GTGCAG | 3 cut(s) | 2089, 2563, 2776 |
| BshFI | GGCC | 6 cut(s) | 238, 528, 723, 923, 1339, 1916 |
| BshTI | ACCGGT | 1 cut(s) | 66 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1268 |
| BsiHKCI | CYCGRG | 2 cut(s) | 114, 1097 |
| BsiSI | CCGG | 6 cut(s) | 67, 515, 1098, 2384, 2703, 3284 |
| BslFI | GGGAC | 4 cut(s) | 116, 395, 1452, 3257 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1794, 2416, 3092 |
| BsmAI | GTCTC | 9 cut(s) | 352, 372, 1290, 1721, 2362, 2422, 2635, 2848, 3262 |
| BsmBI | CGTCTC | 3 cut(s) | 1290, 1721, 2422 |
| BsmFI | GGGAC | 4 cut(s) | 116, 395, 1452, 3257 |
| BsmI | GAATGC | 5 cut(s) | 444, 653, 655, 1179, 3020 |
| BsnI | GGCC | 6 cut(s) | 238, 528, 723, 923, 1339, 1916 |
| BsoBI | CYCGRG | 2 cut(s) | 114, 1097 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1268 |
| Bsp13I | TCCGGA | 2 cut(s) | 2383, 3283 |
| Bsp1407I | TGTACA | 1 cut(s) | 1484 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2108 |
| BspACI | CCGC | 6 cut(s) | 111, 704, 1826, 2341, 3241, 3523 |
| BspANI | GGCC | 6 cut(s) | 238, 528, 723, 923, 1339, 1916 |
| BspCNI | CTCAG | 3 cut(s) | 829, 1244, 3543 |
| BspEI | TCCGGA | 2 cut(s) | 2383, 3283 |
| BspHI | TCATGA | 2 cut(s) | 481, 3370 |
| BspLI | GGNNCC | 5 cut(s) | 237, 751, 1572, 3245, 3545 |
| BspMAI | CTGCAG | 1 cut(s) | 1418 |
| BspPI | GGATC | 6 cut(s) | 1548, 2040, 2514, 2727, 2940, 3394 |
| BsrDI | GCAATG | 2 cut(s) | 1361, 1621 |
| BsrFI | RCCGGY | 1 cut(s) | 66 |
| BsrGI | TGTACA | 1 cut(s) | 1484 |
| BssAI | RCCGGY | 1 cut(s) | 66 |
| BssECI | CCNNGG | 8 cut(s) | 513, 718, 1097, 1098, 1454, 2374, 3274, 3315 |
| BssNAI | GTATAC | 1 cut(s) | 598 |
| BssT1I | CCWWGG | 2 cut(s) | 718, 1454 |
| Bst1107I | GTATAC | 1 cut(s) | 598 |
| Bst2UI | CCWGG | 3 cut(s) | 240, 686, 3316 |
| Bst4CI | ACNGT | 9 cut(s) | 1320, 1732, 1832, 2067, 2450, 2541, 2754, 3174, 3425 |
| Bst6I | CTCTTC | 3 cut(s) | 1719, 2493, 2706 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 701 |
| BstAUI | TGTACA | 1 cut(s) | 1484 |
| BstC8I | GCNNGC | 6 cut(s) | 898, 949, 2317, 3217, 3431, 3440 |
| BstDEI | CTNAG | 9 cut(s) | 816, 845, 1231, 1247, 2036, 2108, 2411, 2510, 3551 |
| BstMAI | GTCTC | 9 cut(s) | 352, 372, 1290, 1721, 2362, 2422, 2635, 2848, 3262 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 701, 1336, 1804, 3435, 3439, 3496 |
| BstNI | CCWGG | 3 cut(s) | 240, 686, 3316 |
| BstNSI | RCATGY | 2 cut(s) | 680, 1467 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 364, 477 |
| BstSCI | CCNGG | 7 cut(s) | 238, 513, 684, 1096, 1097, 2702, 3314 |
| BstSFI | CTRYAG | 4 cut(s) | 304, 1414, 1668, 2192 |
| BstV2I | GAAGAC | 2 cut(s) | 69, 2300 |
| BstX2I | RGATCY | 5 cut(s) | 1540, 2032, 2506, 2719, 2932 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 3315, 3425 |
| BstYI | RGATCY | 5 cut(s) | 1540, 2032, 2506, 2719, 2932 |
| BstZ17I | GTATAC | 1 cut(s) | 598 |
| Bsu36I | CCTNAGG | 2 cut(s) | 816, 2411 |
| BsuRI | GGCC | 6 cut(s) | 238, 528, 723, 923, 1339, 1916 |
| BtrI | CACGTC | 1 cut(s) | 475 |
| BtsI | GCAGTG | 3 cut(s) | 1847, 1981, 2881 |
| Cac8I | GCNNGC | 6 cut(s) | 898, 949, 2317, 3217, 3431, 3440 |
| CciI | TCATGA | 2 cut(s) | 481, 3370 |
| Cfr10I | RCCGGY | 1 cut(s) | 66 |
| Cfr13I | GGNCC | 7 cut(s) | 69, 236, 527, 812, 1819, 3244, 3358 |
| Cfr9I | CCCGGG | 1 cut(s) | 1097 |
| CpoI | CGGWCCG | 1 cut(s) | 69 |
| Csp6I | GTAC | 2 cut(s) | 1485, 1554 |
| CspAI | ACCGGT | 1 cut(s) | 66 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1172, 1207 |
| CspI | CGGWCCG | 1 cut(s) | 69 |
| CviQI | GTAC | 2 cut(s) | 1485, 1554 |
| DdeI | CTNAG | 9 cut(s) | 816, 845, 1231, 1247, 2036, 2108, 2411, 2510, 3551 |
| DraIII | CACNNNGTG | 1 cut(s) | 701 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2436 |
| DriI | GACNNNNNGTC | 1 cut(s) | 185 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2436 |
| EaeI | YGGCCR | 2 cut(s) | 1337, 1914 |
| Eam1104I | CTCTTC | 3 cut(s) | 1719, 2493, 2706 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 185 |
| EarI | CTCTTC | 3 cut(s) | 1719, 2493, 2706 |
| EciI | GGCGGA | 1 cut(s) | 100 |
| Ecl136II | GAGCTC | 1 cut(s) | 1266 |
| Eco130I | CCWWGG | 2 cut(s) | 718, 1454 |
| Eco147I | AGGCCT | 1 cut(s) | 723 |
| Eco24I | GRGCYC | 1 cut(s) | 1268 |
| Eco32I | GATATC | 1 cut(s) | 1209 |
| Eco47I | GGWCC | 5 cut(s) | 69, 812, 1819, 3244, 3358 |
| Eco53kI | GAGCTC | 1 cut(s) | 1266 |
| Eco57I | CTGAAG | 1 cut(s) | 1495 |
| Eco81I | CCTNAGG | 2 cut(s) | 816, 2411 |
| Eco88I | CYCGRG | 2 cut(s) | 114, 1097 |
| EcoICRI | GAGCTC | 1 cut(s) | 1266 |
| EcoO109I | RGGNCCY | 3 cut(s) | 236, 812, 3244 |
| EcoRI | GAATTC | 3 cut(s) | 540, 2379, 3279 |
| EcoRII | CCWGG | 3 cut(s) | 238, 684, 3314 |
| EcoRV | GATATC | 1 cut(s) | 1209 |
| EcoT14I | CCWWGG | 2 cut(s) | 718, 1454 |
| EcoT22I | ATGCAT | 2 cut(s) | 655, 1041 |
| EcoT38I | GRGCYC | 1 cut(s) | 1268 |
| ErhI | CCWWGG | 2 cut(s) | 718, 1454 |
| Esp3I | CGTCTC | 3 cut(s) | 1290, 1721, 2422 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 345, 377 |
| FaqI | GGGAC | 4 cut(s) | 116, 395, 1452, 3257 |
| FauI | CCCGC | 1 cut(s) | 3234 |
| FauNDI | CATATG | 1 cut(s) | 133 |
| FbaI | TGATCA | 2 cut(s) | 409, 622 |
| FblI | GTMKAC | 2 cut(s) | 178, 597 |
| FriOI | GRGCYC | 1 cut(s) | 1268 |
| FspBI | CTAG | 9 cut(s) | 336, 341, 794, 860, 1493, 1823, 2270, 3026, 3092 |
| GsaI | CCCAGC | 2 cut(s) | 2263, 3163 |
| GsuI | CTGGAG | 3 cut(s) | 1314, 2386, 3353 |
| HaeIII | GGCC | 6 cut(s) | 238, 528, 723, 923, 1339, 1916 |
| HapII | CCGG | 6 cut(s) | 67, 515, 1098, 2384, 2703, 3284 |
| HincII | GTYRAC | 2 cut(s) | 1135, 2407 |
| HindII | GTYRAC | 2 cut(s) | 1135, 2407 |
| HindIII | AAGCTT | 5 cut(s) | 627, 945, 1225, 1244, 1697 |
| HpaII | CCGG | 6 cut(s) | 67, 515, 1098, 2384, 2703, 3284 |
| HphI | GGTGA | 7 cut(s) | 409, 923, 1077, 2314, 2692, 3023, 3214 |
| Hpy166II | GTNNAC | 6 cut(s) | 124, 179, 598, 1135, 1554, 2407 |
| Hpy8I | GTNNAC | 6 cut(s) | 124, 179, 598, 1135, 1554, 2407 |
| Hpy99I | CGWCG | 1 cut(s) | 1142 |
| HpyAV | CCTTC | 6 cut(s) | 734, 1429, 1601, 1964, 2350, 3218 |
| HpyCH4III | ACNGT | 9 cut(s) | 1320, 1732, 1832, 2067, 2450, 2541, 2754, 3174, 3425 |
| HpyCH4IV | ACGT | 6 cut(s) | 474, 700, 1140, 1299, 1441, 3300 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 701, 1336, 1804, 3435, 3439, 3496 |
| HpyF3I | CTNAG | 9 cut(s) | 816, 845, 1231, 1247, 2036, 2108, 2411, 2510, 3551 |
| HpySE526I | ACGT | 6 cut(s) | 474, 700, 1140, 1299, 1441, 3300 |
| Kpn2I | TCCGGA | 2 cut(s) | 2383, 3283 |
| Ksp22I | TGATCA | 2 cut(s) | 409, 622 |
| LmnI | GCTCC | 4 cut(s) | 755, 1271, 2386, 3286 |
| MaeI | CTAG | 9 cut(s) | 336, 341, 794, 860, 1493, 1823, 2270, 3026, 3092 |
| MaeII | ACGT | 6 cut(s) | 474, 700, 1140, 1299, 1441, 3300 |
| MaeIII | GTNAC | 6 cut(s) | 1083, 1603, 1953, 1976, 2450, 2876 |
| MfeI | CAATTG | 7 cut(s) | 159, 261, 347, 2001, 2475, 2688, 2901 |
| MflI | RGATCY | 5 cut(s) | 1540, 2032, 2506, 2719, 2932 |
| MhlI | GDGCHC | 1 cut(s) | 1268 |
| MlsI | TGGCCA | 2 cut(s) | 1339, 1916 |
| MluNI | TGGCCA | 2 cut(s) | 1339, 1916 |
| MmeI | TCCRAC | 6 cut(s) | 1518, 1797, 2162, 2484, 2697, 3062 |
| Mox20I | TGGCCA | 2 cut(s) | 1339, 1916 |
| Mph1103I | ATGCAT | 2 cut(s) | 655, 1041 |
| MroI | TCCGGA | 2 cut(s) | 2383, 3283 |
| MroXI | GAANNNNTTC | 2 cut(s) | 653, 882 |
| MscI | TGGCCA | 2 cut(s) | 1339, 1916 |
| MslI | CAYNNNNRTG | 5 cut(s) | 132, 1034, 1429, 3172, 3423 |
| Msp20I | TGGCCA | 2 cut(s) | 1339, 1916 |
| MspA1I | CMGCKG | 2 cut(s) | 637, 1413 |
| MspI | CCGG | 6 cut(s) | 67, 515, 1098, 2384, 2703, 3284 |
| MspR9I | CCNGG | 7 cut(s) | 240, 515, 686, 1098, 1099, 2704, 3316 |
| MunI | CAATTG | 7 cut(s) | 159, 261, 347, 2001, 2475, 2688, 2901 |
| Mva1269I | GAATGC | 5 cut(s) | 444, 653, 655, 1179, 3020 |
| MvaI | CCWGG | 3 cut(s) | 240, 686, 3316 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 701, 1336, 1804, 3435, 3439, 3496 |
| NciI | CCSGG | 4 cut(s) | 515, 1098, 1099, 2704 |
| NdeI | CATATG | 1 cut(s) | 133 |
| NlaIV | GGNNCC | 5 cut(s) | 237, 751, 1572, 3245, 3545 |
| NmeAIII | GCCGAG | 1 cut(s) | 232 |
| NmuCI | GTSAC | 5 cut(s) | 1083, 1953, 1976, 2450, 2876 |
| NsiI | ATGCAT | 2 cut(s) | 655, 1041 |
| NspI | RCATGY | 2 cut(s) | 680, 1467 |
| PagI | TCATGA | 2 cut(s) | 481, 3370 |
| PceI | AGGCCT | 1 cut(s) | 723 |
| PciI | ACATGT | 1 cut(s) | 1463 |
| PctI | GAATGC | 5 cut(s) | 444, 653, 655, 1179, 3020 |
| PdmI | GAANNNNTTC | 2 cut(s) | 653, 882 |
| PflFI | GACNNNGTC | 1 cut(s) | 2436 |
| PinAI | ACCGGT | 1 cut(s) | 66 |
| PpuMI | RGGWCCY | 2 cut(s) | 812, 3244 |
| PscI | ACATGT | 1 cut(s) | 1463 |
| PshAI | GACNNNNGTC | 2 cut(s) | 364, 477 |
| Psp124BI | GAGCTC | 1 cut(s) | 1268 |
| Psp1406I | AACGTT | 1 cut(s) | 3300 |
| Psp5II | RGGWCCY | 2 cut(s) | 812, 3244 |
| Psp6I | CCWGG | 3 cut(s) | 238, 684, 3314 |
| PspFI | CCCAGC | 2 cut(s) | 2259, 3159 |
| PspGI | CCWGG | 3 cut(s) | 238, 684, 3314 |
| PspN4I | GGNNCC | 5 cut(s) | 237, 751, 1572, 3245, 3545 |
| PspPI | GGNCC | 7 cut(s) | 69, 236, 527, 812, 1819, 3244, 3358 |
| PspPPI | RGGWCCY | 2 cut(s) | 812, 3244 |
| PstI | CTGCAG | 1 cut(s) | 1418 |
| PsuI | RGATCY | 5 cut(s) | 1540, 2032, 2506, 2719, 2932 |
| PsyI | GACNNNGTC | 1 cut(s) | 2436 |
| PvuII | CAGCTG | 2 cut(s) | 637, 1413 |
| RsaI | GTAC | 2 cut(s) | 1486, 1555 |
| RsaNI | GTAC | 2 cut(s) | 1485, 1554 |
| RseI | CAYNNNNRTG | 5 cut(s) | 132, 1034, 1429, 3172, 3423 |
| Rsr2I | CGGWCCG | 1 cut(s) | 69 |
| RsrII | CGGWCCG | 1 cut(s) | 69 |
| SacI | GAGCTC | 1 cut(s) | 1268 |
| Sau96I | GGNCC | 7 cut(s) | 69, 236, 527, 812, 1819, 3244, 3358 |
| ScrFI | CCNGG | 7 cut(s) | 240, 515, 686, 1098, 1099, 2704, 3316 |
| SduI | GDGCHC | 1 cut(s) | 1268 |
| SfcI | CTRYAG | 4 cut(s) | 304, 1414, 1668, 2192 |
| SinI | GGWCC | 5 cut(s) | 69, 812, 1819, 3244, 3358 |
| SmaI | CCCGGG | 1 cut(s) | 1099 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 132, 1034, 1429, 3172, 3423 |
| SmlI | CTYRAG | 4 cut(s) | 1700, 1738, 2638, 2851 |
| SmoI | CTYRAG | 4 cut(s) | 1700, 1738, 2638, 2851 |
| SpeI | ACTAGT | 2 cut(s) | 335, 3025 |
| SseBI | AGGCCT | 1 cut(s) | 723 |
| SsiI | CCGC | 6 cut(s) | 111, 704, 1826, 2341, 3241, 3523 |
| SspI | AATATT | 4 cut(s) | 454, 1402, 1861, 2927 |
| SspMI | CTAG | 9 cut(s) | 336, 341, 794, 860, 1493, 1823, 2270, 3026, 3092 |
| SstI | GAGCTC | 1 cut(s) | 1268 |
| StuI | AGGCCT | 1 cut(s) | 723 |
| StyD4I | CCNGG | 7 cut(s) | 238, 513, 684, 1096, 1097, 2702, 3314 |
| StyI | CCWWGG | 2 cut(s) | 718, 1454 |
| TaaI | ACNGT | 9 cut(s) | 1320, 1732, 1832, 2067, 2450, 2541, 2754, 3174, 3425 |
| TaiI | ACGT | 6 cut(s) | 477, 703, 1143, 1302, 1444, 3303 |
| TaqI | TCGA | 7 cut(s) | 332, 1566, 1585, 2120, 2253, 3063, 3347 |
| TatI | WGTACW | 1 cut(s) | 1484 |
| TseFI | GTSAC | 5 cut(s) | 1083, 1953, 1976, 2450, 2876 |
| Tsp45I | GTSAC | 5 cut(s) | 1083, 1953, 1976, 2450, 2876 |
| TspDTI | ATGAA | 9 cut(s) | 120, 606, 681, 1107, 1322, 1484, 1583, 3111, 3387 |
| TspGWI | ACGGA | 2 cut(s) | 1338, 1773 |
| TspMI | CCCGGG | 1 cut(s) | 1097 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2436 |
| VpaK11BI | GGWCC | 5 cut(s) | 69, 812, 1819, 3244, 3358 |
| XbaI | TCTAGA | 1 cut(s) | 859 |
| XceI | RCATGY | 2 cut(s) | 680, 1467 |
| XmaI | CCCGGG | 1 cut(s) | 1097 |
| XmiI | GTMKAC | 2 cut(s) | 178, 597 |
| XmnI | GAANNNNTTC | 2 cut(s) | 653, 882 |
| XspI | CTAG | 9 cut(s) | 336, 341, 794, 860, 1493, 1823, 2270, 3026, 3092 |
| Zsp2I | ATGCAT | 2 cut(s) | 655, 1041 |