TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 19 - 187 | 4.6e-51 | TIR domain |
| TIR_2 | PF13676 | 21 - 117 | 1.1e-15 | TIR domain |
| NB-ARC | PF00931 | 210 - 372 | 2.1e-18 | NB-ARC domain |
| ATPase_2 | PF01637 | 210 - 317 | 2.7e-06 | ATPase domain predominantly from Archaea |
| NACHT | PF05729 | 219 - 364 | 8.5e-07 | NACHT domain |
| WHD_ROQ1 | PF23282 | 445 - 511 | 8.9e-12 | Disease resistance protein Roq1-like, winged-helix domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 717 |
| Acc16I | TGCGCA | 1 cut(s) | 1589 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 124 |
| AccBSI | CCGCTC | 1 cut(s) | 943 |
| AciI | CCGC | 3 cut(s) | 526, 943, 1558 |
| AclWI | GGATC | 2 cut(s) | 341, 354 |
| AcoI | YGGCCR | 3 cut(s) | 3, 326, 579 |
| AcsI | RAATTY | 2 cut(s) | 222, 1535 |
| AcuI | CTGAAG | 1 cut(s) | 16 |
| AdeI | CACNNNGTG | 1 cut(s) | 1151 |
| AfaI | GTAC | 6 cut(s) | 40, 285, 838, 1253, 1422, 1443 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 124, 430, 1180 |
| AflIII | ACRYGT | 1 cut(s) | 1386 |
| AjiI | CACGTC | 2 cut(s) | 928, 1151 |
| AjnI | CCWGG | 2 cut(s) | 753, 1549 |
| AluBI | AGCT | 9 cut(s) | 72, 280, 405, 452, 512, 628, 1087, 1238, 1330 |
| AluI | AGCT | 9 cut(s) | 72, 280, 405, 452, 512, 628, 1087, 1238, 1330 |
| Alw21I | GWGCWC | 1 cut(s) | 282 |
| Alw26I | GTCTC | 1 cut(s) | 307 |
| AlwI | GGATC | 2 cut(s) | 341, 354 |
| Ama87I | CYCGRG | 1 cut(s) | 217 |
| AoxI | GGCC | 4 cut(s) | 3, 326, 579, 1171 |
| ApeKI | GCWGC | 4 cut(s) | 386, 405, 464, 1330 |
| ApoI | RAATTY | 2 cut(s) | 222, 1535 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1103, 1536 |
| AspLEI | GCGC | 1 cut(s) | 1590 |
| AspS9I | GGNCC | 1 cut(s) | 127 |
| AsuC2I | CCSGG | 1 cut(s) | 425 |
| AsuHPI | GGTGA | 2 cut(s) | 180, 989 |
| AvaI | CYCGRG | 1 cut(s) | 217 |
| AvaII | GGWCC | 1 cut(s) | 127 |
| BalI | TGGCCA | 3 cut(s) | 5, 328, 581 |
| BamHI | GGATCC | 1 cut(s) | 346 |
| BanII | GRGCYC | 1 cut(s) | 282 |
| Bbv12I | GWGCWC | 1 cut(s) | 282 |
| BbvI | GCAGC | 4 cut(s) | 373, 392, 476, 1317 |
| BccI | CCATC | 4 cut(s) | 258, 358, 435, 1466 |
| BciT130I | CCWGG | 2 cut(s) | 755, 1551 |
| BciVI | GTATCC | 1 cut(s) | 79 |
| BclI | TGATCA | 1 cut(s) | 993 |
| BcnI | CCSGG | 1 cut(s) | 425 |
| BcoDI | GTCTC | 1 cut(s) | 307 |
| BfaI | CTAG | 2 cut(s) | 402, 1502 |
| BfuI | GTATCC | 1 cut(s) | 79 |
| BisI | GCNGC | 4 cut(s) | 387, 406, 465, 1331 |
| BlsI | GCNGC | 4 cut(s) | 388, 407, 466, 1332 |
| BmcAI | AGTACT | 2 cut(s) | 40, 1443 |
| Bme1390I | CCNGG | 3 cut(s) | 425, 755, 1551 |
| Bme18I | GGWCC | 1 cut(s) | 127 |
| BmeT110I | CYCGRG | 1 cut(s) | 217 |
| BmgBI | CACGTC | 2 cut(s) | 928, 1151 |
| BmgT120I | GGNCC | 1 cut(s) | 127 |
| BmiI | GGNNCC | 1 cut(s) | 348 |
| BmrFI | CCNGG | 3 cut(s) | 425, 755, 1551 |
| BmrI | ACTGGG | 2 cut(s) | 584, 964 |
| BmsI | GCATC | 5 cut(s) | 263, 373, 537, 1303, 1479 |
| BmuI | ACTGGG | 2 cut(s) | 584, 964 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 436, 468, 471, 503 |
| BpmI | CTGGAG | 1 cut(s) | 1107 |
| BpuEI | CTTGAG | 2 cut(s) | 1103, 1152 |
| BpuMI | CCSGG | 1 cut(s) | 425 |
| BsaAI | YACGTR | 2 cut(s) | 833, 1387 |
| BsaBI | GATNNNNATC | 1 cut(s) | 545 |
| BsaJI | CCNNGG | 1 cut(s) | 123 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 124, 430, 1180 |
| Bse1I | ACTGG | 2 cut(s) | 590, 959 |
| Bse3DI | GCAATG | 2 cut(s) | 1350, 1597 |
| Bse8I | GATNNNNATC | 1 cut(s) | 545 |
| BseBI | CCWGG | 2 cut(s) | 755, 1551 |
| BseDI | CCNNGG | 1 cut(s) | 123 |
| BseGI | GGATG | 3 cut(s) | 26, 361, 446 |
| BseJI | GATNNNNATC | 1 cut(s) | 545 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 124, 430, 1180 |
| BseMI | GCAATG | 2 cut(s) | 1350, 1597 |
| BseNI | ACTGG | 2 cut(s) | 590, 959 |
| BseRI | GAGGAG | 2 cut(s) | 93, 551 |
| BseXI | GCAGC | 4 cut(s) | 373, 392, 476, 1317 |
| BsgI | GTGCAG | 2 cut(s) | 127, 1193 |
| BshFI | GGCC | 4 cut(s) | 5, 328, 581, 1173 |
| BsiHKAI | GWGCWC | 1 cut(s) | 282 |
| BsiHKCI | CYCGRG | 1 cut(s) | 217 |
| BsiSI | CCGG | 1 cut(s) | 425 |
| BslFI | GGGAC | 2 cut(s) | 2, 688 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 124, 430, 1180 |
| BsmAI | GTCTC | 1 cut(s) | 307 |
| BsmFI | GGGAC | 2 cut(s) | 2, 688 |
| BsmI | GAATGC | 1 cut(s) | 1105 |
| BsnI | GGCC | 4 cut(s) | 5, 328, 581, 1173 |
| BsoBI | CYCGRG | 1 cut(s) | 217 |
| Bsp1286I | GDGCHC | 1 cut(s) | 282 |
| Bsp143I | GATC | 3 cut(s) | 346, 649, 993 |
| BspACI | CCGC | 3 cut(s) | 526, 943, 1558 |
| BspANI | GGCC | 4 cut(s) | 5, 328, 581, 1173 |
| BspHI | TCATGA | 1 cut(s) | 1576 |
| BspLI | GGNNCC | 1 cut(s) | 348 |
| BspPI | GGATC | 2 cut(s) | 341, 354 |
| BspQI | GCTCTTC | 1 cut(s) | 618 |
| BsrBI | CCGCTC | 1 cut(s) | 943 |
| BsrDI | GCAATG | 2 cut(s) | 1350, 1597 |
| BsrI | ACTGG | 2 cut(s) | 590, 959 |
| BssECI | CCNNGG | 1 cut(s) | 123 |
| BssMI | GATC | 3 cut(s) | 346, 649, 993 |
| BssT1I | CCWWGG | 1 cut(s) | 123 |
| Bst2UI | CCWGG | 2 cut(s) | 755, 1551 |
| Bst4CI | ACNGT | 2 cut(s) | 1265, 1607 |
| Bst6I | CTCTTC | 3 cut(s) | 201, 618, 819 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1151, 1498 |
| BstBAI | YACGTR | 2 cut(s) | 833, 1387 |
| BstC8I | GCNNGC | 2 cut(s) | 1236, 1556 |
| BstDEI | CTNAG | 2 cut(s) | 271, 1091 |
| BstF5I | GGATG | 3 cut(s) | 26, 361, 446 |
| BstHHI | GCGC | 1 cut(s) | 1590 |
| BstKTI | GATC | 3 cut(s) | 349, 652, 996 |
| BstMAI | GTCTC | 1 cut(s) | 307 |
| BstMBI | GATC | 3 cut(s) | 346, 649, 993 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 392, 1151, 1498, 1560 |
| BstNI | CCWGG | 2 cut(s) | 755, 1551 |
| BstSCI | CCNGG | 3 cut(s) | 423, 753, 1549 |
| BstV1I | GCAGC | 4 cut(s) | 373, 392, 476, 1317 |
| BstX2I | RGATCY | 1 cut(s) | 346 |
| BstYI | RGATCY | 1 cut(s) | 346 |
| BsuI | GTATCC | 1 cut(s) | 79 |
| BsuRI | GGCC | 4 cut(s) | 5, 328, 581, 1173 |
| BtrI | CACGTC | 2 cut(s) | 928, 1151 |
| BtsCI | GGATG | 3 cut(s) | 26, 361, 446 |
| BtsIMutI | CAGTG | 1 cut(s) | 1270 |
| Cac8I | GCNNGC | 2 cut(s) | 1236, 1556 |
| CciI | TCATGA | 1 cut(s) | 1576 |
| CfoI | GCGC | 1 cut(s) | 1590 |
| Cfr13I | GGNCC | 1 cut(s) | 127 |
| CseI | GACGC | 1 cut(s) | 1420 |
| Csp6I | GTAC | 6 cut(s) | 39, 284, 837, 1252, 1421, 1442 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 600, 635 |
| CviAII | CATG | 8 cut(s) | 48, 119, 324, 785, 1163, 1317, 1493, 1577 |
| CviQI | GTAC | 6 cut(s) | 39, 284, 837, 1252, 1421, 1442 |
| DdeI | CTNAG | 2 cut(s) | 271, 1091 |
| DpnI | GATC | 3 cut(s) | 348, 651, 995 |
| DpnII | GATC | 3 cut(s) | 346, 649, 993 |
| DraIII | CACNNNGTG | 1 cut(s) | 1151 |
| EaeI | YGGCCR | 3 cut(s) | 3, 326, 579 |
| Eam1104I | CTCTTC | 3 cut(s) | 201, 618, 819 |
| EarI | CTCTTC | 3 cut(s) | 201, 618, 819 |
| Ecl136II | GAGCTC | 1 cut(s) | 280 |
| Eco130I | CCWWGG | 1 cut(s) | 123 |
| Eco147I | AGGCCT | 1 cut(s) | 1173 |
| Eco24I | GRGCYC | 1 cut(s) | 282 |
| Eco47I | GGWCC | 1 cut(s) | 127 |
| Eco53kI | GAGCTC | 1 cut(s) | 280 |
| Eco57I | CTGAAG | 1 cut(s) | 16 |
| Eco88I | CYCGRG | 1 cut(s) | 217 |
| EcoICRI | GAGCTC | 1 cut(s) | 280 |
| EcoRII | CCWGG | 2 cut(s) | 753, 1549 |
| EcoT14I | CCWWGG | 1 cut(s) | 123 |
| EcoT22I | ATGCAT | 3 cut(s) | 256, 1318, 1494 |
| EcoT38I | GRGCYC | 1 cut(s) | 282 |
| ErhI | CCWWGG | 1 cut(s) | 123 |
| FaeI | CATG | 8 cut(s) | 51, 122, 327, 788, 1166, 1320, 1496, 1580 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 896, 928 |
| FaqI | GGGAC | 2 cut(s) | 2, 688 |
| FatI | CATG | 8 cut(s) | 47, 118, 323, 784, 1162, 1316, 1492, 1576 |
| FbaI | TGATCA | 1 cut(s) | 993 |
| Fnu4HI | GCNGC | 4 cut(s) | 387, 406, 465, 1331 |
| FokI | GGATG | 3 cut(s) | 13, 368, 453 |
| FriOI | GRGCYC | 1 cut(s) | 282 |
| Fsp4HI | GCNGC | 4 cut(s) | 387, 406, 465, 1331 |
| FspBI | CTAG | 2 cut(s) | 402, 1502 |
| FspI | TGCGCA | 1 cut(s) | 1589 |
| GlaI | GCGC | 1 cut(s) | 1589 |
| GluI | GCNGC | 4 cut(s) | 387, 406, 465, 1331 |
| GsuI | CTGGAG | 1 cut(s) | 1107 |
| HaeIII | GGCC | 4 cut(s) | 5, 328, 581, 1173 |
| HapII | CCGG | 1 cut(s) | 425 |
| HgaI | GACGC | 1 cut(s) | 1420 |
| HhaI | GCGC | 1 cut(s) | 1590 |
| Hin1II | CATG | 8 cut(s) | 51, 122, 327, 788, 1166, 1320, 1496, 1580 |
| Hin6I | GCGC | 1 cut(s) | 1588 |
| HinP1I | GCGC | 1 cut(s) | 1588 |
| HinfI | GANTC | 8 cut(s) | 138, 585, 602, 870, 886, 907, 1025, 1256 |
| HpaII | CCGG | 1 cut(s) | 425 |
| HphI | GGTGA | 2 cut(s) | 180, 989 |
| Hpy166II | GTNNAC | 2 cut(s) | 164, 1528 |
| Hpy188I | TCNGA | 6 cut(s) | 244, 355, 362, 474, 1058, 1482 |
| Hpy188III | TCNNGA | 8 cut(s) | 219, 261, 488, 681, 920, 1124, 1427, 1577 |
| Hpy8I | GTNNAC | 2 cut(s) | 164, 1528 |
| Hpy99I | CGWCG | 4 cut(s) | 494, 657, 1152, 1414 |
| HpyCH4III | ACNGT | 2 cut(s) | 1265, 1607 |
| HpyCH4IV | ACGT | 5 cut(s) | 832, 927, 1150, 1386, 1423 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 392, 1151, 1498, 1560 |
| HpyF3I | CTNAG | 2 cut(s) | 271, 1091 |
| HpySE526I | ACGT | 5 cut(s) | 832, 927, 1150, 1386, 1423 |
| Hsp92II | CATG | 8 cut(s) | 51, 122, 327, 788, 1166, 1320, 1496, 1580 |
| HspAI | GCGC | 1 cut(s) | 1588 |
| Ksp22I | TGATCA | 1 cut(s) | 993 |
| Kzo9I | GATC | 3 cut(s) | 346, 649, 993 |
| LguI | GCTCTTC | 1 cut(s) | 618 |
| LmnI | GCTCC | 2 cut(s) | 940, 1560 |
| Lsp1109I | GCAGC | 4 cut(s) | 373, 392, 476, 1317 |
| LweI | GCATC | 5 cut(s) | 263, 373, 537, 1303, 1479 |
| MaeI | CTAG | 2 cut(s) | 402, 1502 |
| MaeII | ACGT | 5 cut(s) | 832, 927, 1150, 1386, 1423 |
| MaeIII | GTNAC | 2 cut(s) | 131, 1389 |
| MalI | GATC | 3 cut(s) | 348, 651, 995 |
| MbiI | CCGCTC | 1 cut(s) | 943 |
| MboI | GATC | 3 cut(s) | 346, 649, 993 |
| MfeI | CAATTG | 3 cut(s) | 207, 699, 723 |
| MflI | RGATCY | 1 cut(s) | 346 |
| MhlI | GDGCHC | 1 cut(s) | 282 |
| MlsI | TGGCCA | 3 cut(s) | 5, 328, 581 |
| MluNI | TGGCCA | 3 cut(s) | 5, 328, 581 |
| MlyI | GAGTC | 1 cut(s) | 611 |
| MmeI | TCCRAC | 4 cut(s) | 194, 385, 574, 1076 |
| MnlI | CCTC | 9 cut(s) | 71, 76, 438, 529, 610, 703, 1007, 1131, 1151 |
| Mox20I | TGGCCA | 3 cut(s) | 5, 328, 581 |
| Mph1103I | ATGCAT | 3 cut(s) | 256, 1318, 1494 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1103, 1536 |
| MscI | TGGCCA | 3 cut(s) | 5, 328, 581 |
| MseI | TTAA | 8 cut(s) | 294, 522, 882, 914, 947, 1188, 1298, 1632 |
| MslI | CAYNNNNRTG | 2 cut(s) | 573, 1581 |
| Msp20I | TGGCCA | 3 cut(s) | 5, 328, 581 |
| MspI | CCGG | 1 cut(s) | 425 |
| MspR9I | CCNGG | 3 cut(s) | 425, 755, 1551 |
| MunI | CAATTG | 3 cut(s) | 207, 699, 723 |
| Mva1269I | GAATGC | 1 cut(s) | 1105 |
| MvaI | CCWGG | 2 cut(s) | 755, 1551 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 392, 1151, 1498, 1560 |
| NciI | CCSGG | 1 cut(s) | 425 |
| NdeII | GATC | 3 cut(s) | 346, 649, 993 |
| NlaIII | CATG | 8 cut(s) | 51, 122, 327, 788, 1166, 1320, 1496, 1580 |
| NlaIV | GGNNCC | 1 cut(s) | 348 |
| NmuCI | GTSAC | 1 cut(s) | 131 |
| NsbI | TGCGCA | 1 cut(s) | 1589 |
| NsiI | ATGCAT | 3 cut(s) | 256, 1318, 1494 |
| PaeR7I | CTCGAG | 1 cut(s) | 217 |
| PagI | TCATGA | 1 cut(s) | 1576 |
| PceI | AGGCCT | 1 cut(s) | 1173 |
| PciSI | GCTCTTC | 1 cut(s) | 618 |
| PctI | GAATGC | 1 cut(s) | 1105 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1103, 1536 |
| PfeI | GAWTC | 7 cut(s) | 138, 585, 870, 886, 907, 1025, 1256 |
| PflFI | GACNNNGTC | 1 cut(s) | 956 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 124 |
| PkrI | GCNGC | 4 cut(s) | 388, 407, 466, 1332 |
| PleI | GAGTC | 1 cut(s) | 610 |
| PpsI | GAGTC | 1 cut(s) | 610 |
| Ppu21I | YACGTR | 2 cut(s) | 833, 1387 |
| PsiI | TTATAA | 1 cut(s) | 717 |
| Psp124BI | GAGCTC | 1 cut(s) | 282 |
| Psp6I | CCWGG | 2 cut(s) | 753, 1549 |
| PspGI | CCWGG | 2 cut(s) | 753, 1549 |
| PspN4I | GGNNCC | 1 cut(s) | 348 |
| PspPI | GGNCC | 1 cut(s) | 127 |
| PsuI | RGATCY | 1 cut(s) | 346 |
| PsyI | GACNNNGTC | 1 cut(s) | 956 |
| RsaI | GTAC | 6 cut(s) | 40, 285, 838, 1253, 1422, 1443 |
| RsaNI | GTAC | 6 cut(s) | 39, 284, 837, 1252, 1421, 1442 |
| RseI | CAYNNNNRTG | 2 cut(s) | 573, 1581 |
| SacI | GAGCTC | 1 cut(s) | 282 |
| SapI | GCTCTTC | 1 cut(s) | 618 |
| SaqAI | TTAA | 8 cut(s) | 294, 522, 882, 914, 947, 1188, 1298, 1632 |
| SatI | GCNGC | 4 cut(s) | 387, 406, 465, 1331 |
| Sau3AI | GATC | 3 cut(s) | 346, 649, 993 |
| Sau96I | GGNCC | 1 cut(s) | 127 |
| ScaI | AGTACT | 2 cut(s) | 40, 1443 |
| SchI | GAGTC | 1 cut(s) | 611 |
| ScrFI | CCNGG | 3 cut(s) | 425, 755, 1551 |
| SduI | GDGCHC | 1 cut(s) | 282 |
| SfaNI | GCATC | 5 cut(s) | 263, 373, 537, 1303, 1479 |
| Sfr274I | CTCGAG | 1 cut(s) | 217 |
| SinI | GGWCC | 1 cut(s) | 127 |
| SlaI | CTCGAG | 1 cut(s) | 217 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 573, 1581 |
| SmlI | CTYRAG | 3 cut(s) | 217, 1082, 1167 |
| SmoI | CTYRAG | 3 cut(s) | 217, 1082, 1167 |
| SseBI | AGGCCT | 1 cut(s) | 1173 |
| SsiI | CCGC | 3 cut(s) | 526, 943, 1558 |
| SspI | AATATT | 2 cut(s) | 1192, 1398 |
| SspMI | CTAG | 2 cut(s) | 402, 1502 |
| SstI | GAGCTC | 1 cut(s) | 282 |
| StuI | AGGCCT | 1 cut(s) | 1173 |
| StyD4I | CCNGG | 3 cut(s) | 423, 753, 1549 |
| StyI | CCWWGG | 1 cut(s) | 123 |
| TaaI | ACNGT | 2 cut(s) | 1265, 1607 |
| TaiI | ACGT | 5 cut(s) | 835, 930, 1153, 1389, 1426 |
| TaqI | TCGA | 6 cut(s) | 218, 489, 960, 966, 1409, 1416 |
| TatI | WGTACW | 2 cut(s) | 38, 1441 |
| TfiI | GAWTC | 7 cut(s) | 138, 585, 870, 886, 907, 1025, 1256 |
| Tru1I | TTAA | 8 cut(s) | 294, 522, 882, 914, 947, 1188, 1298, 1632 |
| Tru9I | TTAA | 8 cut(s) | 294, 522, 882, 914, 947, 1188, 1298, 1632 |
| TscAI | CASTG | 1 cut(s) | 1270 |
| TseFI | GTSAC | 1 cut(s) | 131 |
| TseI | GCWGC | 4 cut(s) | 386, 405, 464, 1330 |
| Tsp45I | GTSAC | 1 cut(s) | 131 |
| TspDTI | ATGAA | 9 cut(s) | 15, 36, 522, 801, 851, 1047, 1065, 1560, 1593 |
| TspGWI | ACGGA | 3 cut(s) | 119, 150, 882 |
| TspRI | CASTG | 1 cut(s) | 1270 |
| Tth111I | GACNNNGTC | 1 cut(s) | 956 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 124 |
| VpaK11BI | GGWCC | 1 cut(s) | 127 |
| XapI | RAATTY | 2 cut(s) | 222, 1535 |
| XhoI | CTCGAG | 1 cut(s) | 217 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1103, 1536 |
| XspI | CTAG | 2 cut(s) | 402, 1502 |
| ZrmI | AGTACT | 2 cut(s) | 40, 1443 |
| Zsp2I | ATGCAT | 3 cut(s) | 256, 1318, 1494 |