TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 37 - 183 | 1.7e-47 | TIR domain |
| TIR_2 | PF13676 | 39 - 131 | 4.5e-14 | TIR domain |
| NB-ARC | PF00931 | 189 - 269 | 2.7e-09 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 339 - 409 | 1.7e-16 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 564 - 695 | 3.1e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 666 - 750 | 1e-05 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 688 - 768 | 1.6e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 737 - 908 | 4e-20 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 757 - 904 | 3.5e-07 | Leucine-rich repeat region |
| LRR_4 | PF12799 | 868 - 910 | 6.5e-06 | Leucine Rich repeats (2 copies) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 569 |
| AccBSI | CCGCTC | 1 cut(s) | 2611 |
| AccI | GTMKAC | 1 cut(s) | 1275 |
| AccII | CGCG | 2 cut(s) | 145, 2875 |
| AccIII | TCCGGA | 1 cut(s) | 2719 |
| AciI | CCGC | 6 cut(s) | 48, 2611, 2677, 2868, 2873, 2875 |
| AclI | AACGTT | 2 cut(s) | 706, 2736 |
| AclWI | GGATC | 1 cut(s) | 1611 |
| AcuI | CTGAAG | 1 cut(s) | 187 |
| AcyI | GRCGYC | 2 cut(s) | 2827, 2865 |
| AfaI | GTAC | 4 cut(s) | 411, 1303, 1891, 2542 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 136, 315, 2130, 2443, 2874 |
| AflIII | ACRYGT | 2 cut(s) | 841, 1592 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2796 |
| AjiI | CACGTC | 1 cut(s) | 616 |
| AjnI | CCWGG | 1 cut(s) | 1331 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2334, 2366 |
| Alw21I | GWGCWC | 1 cut(s) | 249 |
| Alw26I | GTCTC | 4 cut(s) | 693, 1200, 2284, 2698 |
| AlwI | GGATC | 1 cut(s) | 1611 |
| Ama87I | CYCGRG | 2 cut(s) | 670, 1238 |
| Aor13HI | TCCGGA | 1 cut(s) | 2719 |
| AoxI | GGCC | 3 cut(s) | 364, 667, 862 |
| ApeKI | GCWGC | 5 cut(s) | 44, 509, 1061, 1248, 2406 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1023 |
| AspLEI | GCGC | 1 cut(s) | 147 |
| AspS9I | GGNCC | 3 cut(s) | 668, 953, 1327 |
| AsuC2I | CCSGG | 4 cut(s) | 671, 672, 1239, 1240 |
| AsuHPI | GGTGA | 7 cut(s) | 83, 446, 1123, 1218, 2459, 2650, 2879 |
| AvaI | CYCGRG | 2 cut(s) | 670, 1238 |
| AvaII | GGWCC | 2 cut(s) | 953, 1327 |
| AxyI | CCTNAGG | 1 cut(s) | 957 |
| BanII | GRGCYC | 1 cut(s) | 249 |
| BbsI | GAAGAC | 4 cut(s) | 237, 280, 2636, 2837 |
| Bbv12I | GWGCWC | 1 cut(s) | 249 |
| BbvCI | CCTCAGC | 1 cut(s) | 185 |
| BbvI | GCAGC | 5 cut(s) | 56, 521, 1073, 1260, 2418 |
| BceAI | ACGGC | 1 cut(s) | 2173 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1487, 1521 |
| BciT130I | CCWGG | 1 cut(s) | 1333 |
| BciVI | GTATCC | 3 cut(s) | 133, 1765, 1834 |
| BclI | TGATCA | 4 cut(s) | 88, 454, 550, 1165 |
| BcnI | CCSGG | 4 cut(s) | 671, 672, 1239, 1240 |
| BcoDI | GTCTC | 4 cut(s) | 693, 1200, 2284, 2698 |
| BfaI | CTAG | 7 cut(s) | 627, 827, 1001, 1082, 2216, 2270, 2625 |
| BfmI | CTRYAG | 2 cut(s) | 349, 2528 |
| BfuI | GTATCC | 3 cut(s) | 133, 1765, 1834 |
| BisI | GCNGC | 8 cut(s) | 45, 48, 510, 1062, 1249, 2407, 2612, 2868 |
| BlpI | GCTNAGC | 1 cut(s) | 218 |
| BlsI | GCNGC | 8 cut(s) | 46, 49, 511, 1063, 1250, 2408, 2613, 2869 |
| Bme1390I | CCNGG | 5 cut(s) | 671, 672, 1239, 1240, 1333 |
| Bme18I | GGWCC | 2 cut(s) | 953, 1327 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2796 |
| BmeT110I | CYCGRG | 2 cut(s) | 670, 1238 |
| BmgBI | CACGTC | 1 cut(s) | 616 |
| BmgT120I | GGNCC | 3 cut(s) | 668, 953, 1327 |
| BmiI | GGNNCC | 5 cut(s) | 399, 892, 1329, 1908, 2924 |
| BmrFI | CCNGG | 5 cut(s) | 671, 672, 1239, 1240, 1333 |
| BmsI | GCATC | 7 cut(s) | 486, 985, 1167, 2076, 2125, 2228, 2540 |
| BoxI | GACNNNNGTC | 2 cut(s) | 618, 1779 |
| BpiI | GAAGAC | 4 cut(s) | 237, 280, 2636, 2837 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 481, 513 |
| BpmI | CTGGAG | 2 cut(s) | 1443, 2789 |
| Bpu10I | CCTNAGC | 1 cut(s) | 185 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 218 |
| BpuEI | CTTGAG | 6 cut(s) | 295, 521, 1660, 1729, 1798, 2308 |
| BpuMI | CCSGG | 4 cut(s) | 671, 672, 1239, 1240 |
| BsaHI | GRCGYC | 2 cut(s) | 2827, 2865 |
| BsaJI | CCNNGG | 6 cut(s) | 130, 670, 859, 1238, 1331, 2873 |
| BsaWI | WCCGGW | 1 cut(s) | 2719 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 231, 261 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 136, 315, 2130, 2443, 2874 |
| Bse118I | RCCGGY | 1 cut(s) | 2889 |
| Bse1I | ACTGG | 6 cut(s) | 51, 336, 1447, 2232, 2253, 2772 |
| Bse21I | CCTNAGG | 1 cut(s) | 957 |
| Bse3DI | GCAATG | 1 cut(s) | 1490 |
| BseAI | TCCGGA | 1 cut(s) | 2719 |
| BseBI | CCWGG | 1 cut(s) | 1333 |
| BseDI | CCNNGG | 6 cut(s) | 130, 670, 859, 1238, 1331, 2873 |
| BseGI | GGATG | 9 cut(s) | 498, 530, 650, 1182, 1493, 2116, 2243, 2335, 2555 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 136, 315, 2130, 2443, 2874 |
| BseMI | GCAATG | 1 cut(s) | 1490 |
| BseMII | CTCAG | 6 cut(s) | 113, 176, 265, 417, 971, 2885 |
| BseNI | ACTGG | 6 cut(s) | 51, 336, 1447, 2232, 2253, 2772 |
| BseRI | GAGGAG | 6 cut(s) | 239, 240, 278, 551, 932, 2786 |
| BseXI | GCAGC | 5 cut(s) | 56, 521, 1073, 1260, 2418 |
| BseYI | CCCAGC | 1 cut(s) | 2595 |
| BsgI | GTGCAG | 2 cut(s) | 1080, 2425 |
| Bsh1236I | CGCG | 2 cut(s) | 145, 2875 |
| BshFI | GGCC | 3 cut(s) | 366, 669, 864 |
| BsiHKAI | GWGCWC | 1 cut(s) | 249 |
| BsiHKCI | CYCGRG | 2 cut(s) | 670, 1238 |
| BsiSI | CCGG | 5 cut(s) | 671, 1239, 2720, 2824, 2890 |
| BslFI | GGGAC | 3 cut(s) | 1313, 1581, 2177 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 136, 315, 2130, 2443, 2874 |
| BsmAI | GTCTC | 4 cut(s) | 693, 1200, 2284, 2698 |
| BsmFI | GGGAC | 3 cut(s) | 1313, 1581, 2177 |
| BsmI | GAATGC | 5 cut(s) | 585, 794, 1320, 1363, 2456 |
| BsnI | GGCC | 3 cut(s) | 366, 669, 864 |
| BsoBI | CYCGRG | 2 cut(s) | 670, 1238 |
| Bsp1286I | GDGCHC | 1 cut(s) | 249 |
| Bsp13I | TCCGGA | 1 cut(s) | 2719 |
| Bsp143I | GATC | 8 cut(s) | 88, 160, 454, 550, 760, 1165, 1616, 2440 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 218 |
| BspACI | CCGC | 6 cut(s) | 48, 2611, 2677, 2868, 2873, 2875 |
| BspANI | GGCC | 3 cut(s) | 366, 669, 864 |
| BspCNI | CTCAG | 6 cut(s) | 114, 177, 264, 416, 970, 2886 |
| BspEI | TCCGGA | 1 cut(s) | 2719 |
| BspFNI | CGCG | 2 cut(s) | 145, 2875 |
| BspHI | TCATGA | 1 cut(s) | 721 |
| BspLI | GGNNCC | 5 cut(s) | 399, 892, 1329, 1908, 2924 |
| BspMAI | CTGCAG | 1 cut(s) | 353 |
| BspPI | GGATC | 1 cut(s) | 1611 |
| BsrBI | CCGCTC | 1 cut(s) | 2611 |
| BsrDI | GCAATG | 1 cut(s) | 1490 |
| BsrFI | RCCGGY | 1 cut(s) | 2889 |
| BsrI | ACTGG | 6 cut(s) | 51, 336, 1447, 2232, 2253, 2772 |
| BssAI | RCCGGY | 1 cut(s) | 2889 |
| BssECI | CCNNGG | 6 cut(s) | 130, 670, 859, 1238, 1331, 2873 |
| BssMI | GATC | 8 cut(s) | 88, 160, 454, 550, 760, 1165, 1616, 2440 |
| BssNI | GRCGYC | 2 cut(s) | 2827, 2865 |
| BssT1I | CCWWGG | 1 cut(s) | 859 |
| Bst2UI | CCWGG | 1 cut(s) | 1333 |
| Bst4CI | ACNGT | 3 cut(s) | 1958, 2168, 2403 |
| Bst6I | CTCTTC | 1 cut(s) | 2055 |
| BstACI | GRCGYC | 2 cut(s) | 2827, 2865 |
| BstC8I | GCNNGC | 7 cut(s) | 14, 792, 1039, 1059, 1090, 1470, 2653 |
| BstDSI | CCRYGG | 1 cut(s) | 2873 |
| BstF5I | GGATG | 9 cut(s) | 498, 530, 650, 1182, 1493, 2116, 2243, 2335, 2555 |
| BstFNI | CGCG | 2 cut(s) | 145, 2875 |
| BstHHI | GCGC | 1 cut(s) | 147 |
| BstKTI | GATC | 8 cut(s) | 91, 163, 457, 553, 763, 1168, 1619, 2443 |
| BstMAI | GTCTC | 4 cut(s) | 693, 1200, 2284, 2698 |
| BstMBI | GATC | 8 cut(s) | 88, 160, 454, 550, 760, 1165, 1616, 2440 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 13, 1465, 2140, 2228 |
| BstNI | CCWGG | 1 cut(s) | 1333 |
| BstNSI | RCATGY | 4 cut(s) | 794, 845, 1476, 1596 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 618, 1779 |
| BstSCI | CCNGG | 5 cut(s) | 669, 670, 1237, 1238, 1331 |
| BstSFI | CTRYAG | 2 cut(s) | 349, 2528 |
| BstUI | CGCG | 2 cut(s) | 145, 2875 |
| BstV1I | GCAGC | 5 cut(s) | 56, 521, 1073, 1260, 2418 |
| BstV2I | GAAGAC | 4 cut(s) | 237, 280, 2636, 2837 |
| BstX2I | RGATCY | 1 cut(s) | 1616 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1450 |
| BstYI | RGATCY | 1 cut(s) | 1616 |
| Bsu36I | CCTNAGG | 1 cut(s) | 957 |
| BsuI | GTATCC | 3 cut(s) | 133, 1765, 1834 |
| BsuRI | GGCC | 3 cut(s) | 366, 669, 864 |
| BtgI | CCRYGG | 1 cut(s) | 2873 |
| BtrI | CACGTC | 1 cut(s) | 616 |
| BtsCI | GGATG | 9 cut(s) | 498, 530, 650, 1182, 1493, 2116, 2243, 2335, 2555 |
| BtsI | GCAGTG | 1 cut(s) | 2317 |
| BtsIMutI | CAGTG | 2 cut(s) | 2239, 2317 |
| Cac8I | GCNNGC | 7 cut(s) | 14, 792, 1039, 1059, 1090, 1470, 2653 |
| CciI | TCATGA | 1 cut(s) | 721 |
| CfoI | GCGC | 1 cut(s) | 147 |
| Cfr10I | RCCGGY | 1 cut(s) | 2889 |
| Cfr13I | GGNCC | 3 cut(s) | 668, 953, 1327 |
| Cfr42I | CCGCGG | 1 cut(s) | 2876 |
| Cfr9I | CCCGGG | 2 cut(s) | 670, 1238 |
| CseI | GACGC | 3 cut(s) | 446, 2816, 2873 |
| Csp6I | GTAC | 4 cut(s) | 410, 1302, 1890, 2541 |
| CviAII | CATG | 9 cut(s) | 722, 767, 791, 842, 1181, 1473, 1505, 1593, 2831 |
| CviQI | GTAC | 4 cut(s) | 410, 1302, 1890, 2541 |
| DpnI | GATC | 8 cut(s) | 90, 162, 456, 552, 762, 1167, 1618, 2442 |
| DpnII | GATC | 8 cut(s) | 88, 160, 454, 550, 760, 1165, 1616, 2440 |
| DraI | TTTAAA | 4 cut(s) | 1014, 1048, 1812, 2107 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2796 |
| Eam1104I | CTCTTC | 1 cut(s) | 2055 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2796 |
| EarI | CTCTTC | 1 cut(s) | 2055 |
| Ecl136II | GAGCTC | 1 cut(s) | 247 |
| Eco130I | CCWWGG | 1 cut(s) | 859 |
| Eco147I | AGGCCT | 1 cut(s) | 864 |
| Eco24I | GRGCYC | 1 cut(s) | 249 |
| Eco47I | GGWCC | 2 cut(s) | 953, 1327 |
| Eco53kI | GAGCTC | 1 cut(s) | 247 |
| Eco57I | CTGAAG | 1 cut(s) | 187 |
| Eco81I | CCTNAGG | 1 cut(s) | 957 |
| Eco88I | CYCGRG | 2 cut(s) | 670, 1238 |
| EcoICRI | GAGCTC | 1 cut(s) | 247 |
| EcoO109I | RGGNCCY | 2 cut(s) | 953, 1327 |
| EcoRII | CCWGG | 1 cut(s) | 1331 |
| EcoT14I | CCWWGG | 1 cut(s) | 859 |
| EcoT22I | ATGCAT | 2 cut(s) | 796, 1182 |
| EcoT38I | GRGCYC | 1 cut(s) | 249 |
| ErhI | CCWWGG | 1 cut(s) | 859 |
| FaeI | CATG | 9 cut(s) | 725, 770, 794, 845, 1184, 1476, 1508, 1596, 2834 |
| FaqI | GGGAC | 3 cut(s) | 1313, 1581, 2177 |
| FatI | CATG | 9 cut(s) | 721, 766, 790, 841, 1180, 1472, 1504, 1592, 2830 |
| FauI | CCCGC | 1 cut(s) | 2670 |
| FbaI | TGATCA | 4 cut(s) | 88, 454, 550, 1165 |
| FblI | GTMKAC | 1 cut(s) | 1275 |
| Fnu4HI | GCNGC | 8 cut(s) | 45, 48, 510, 1062, 1249, 2407, 2612, 2868 |
| FokI | GGATG | 9 cut(s) | 505, 537, 637, 1189, 1480, 2103, 2250, 2342, 2562 |
| FriOI | GRGCYC | 1 cut(s) | 249 |
| Fsp4HI | GCNGC | 8 cut(s) | 45, 48, 510, 1062, 1249, 2407, 2612, 2868 |
| FspBI | CTAG | 7 cut(s) | 627, 827, 1001, 1082, 2216, 2270, 2625 |
| GlaI | GCGC | 1 cut(s) | 146 |
| GluI | GCNGC | 8 cut(s) | 45, 48, 510, 1062, 1249, 2407, 2612, 2868 |
| GsaI | CCCAGC | 1 cut(s) | 2599 |
| GsuI | CTGGAG | 2 cut(s) | 1443, 2789 |
| HaeIII | GGCC | 3 cut(s) | 366, 669, 864 |
| HapII | CCGG | 5 cut(s) | 671, 1239, 2720, 2824, 2890 |
| HgaI | GACGC | 3 cut(s) | 446, 2816, 2873 |
| HhaI | GCGC | 1 cut(s) | 147 |
| Hin1I | GRCGYC | 2 cut(s) | 2827, 2865 |
| Hin1II | CATG | 9 cut(s) | 725, 770, 794, 845, 1184, 1476, 1508, 1596, 2834 |
| Hin6I | GCGC | 1 cut(s) | 145 |
| HinP1I | GCGC | 1 cut(s) | 145 |
| HincII | GTYRAC | 1 cut(s) | 1954 |
| HindII | GTYRAC | 1 cut(s) | 1954 |
| HindIII | AAGCTT | 3 cut(s) | 215, 1086, 1366 |
| HpaII | CCGG | 5 cut(s) | 671, 1239, 2720, 2824, 2890 |
| HphI | GGTGA | 7 cut(s) | 83, 446, 1123, 1218, 2459, 2650, 2879 |
| Hpy166II | GTNNAC | 2 cut(s) | 1276, 1954 |
| Hpy8I | GTNNAC | 2 cut(s) | 1276, 1954 |
| Hpy99I | CGWCG | 2 cut(s) | 287, 2867 |
| HpyAV | CCTTC | 4 cut(s) | 211, 875, 1937, 2300 |
| HpyCH4III | ACNGT | 3 cut(s) | 1958, 2168, 2403 |
| HpyCH4IV | ACGT | 5 cut(s) | 615, 706, 1281, 1570, 2736 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 13, 1465, 2140, 2228 |
| HpySE526I | ACGT | 5 cut(s) | 615, 706, 1281, 1570, 2736 |
| Hsp92I | GRCGYC | 2 cut(s) | 2827, 2865 |
| Hsp92II | CATG | 9 cut(s) | 725, 770, 794, 845, 1184, 1476, 1508, 1596, 2834 |
| HspAI | GCGC | 1 cut(s) | 145 |
| Kpn2I | TCCGGA | 1 cut(s) | 2719 |
| Ksp22I | TGATCA | 4 cut(s) | 88, 454, 550, 1165 |
| KspI | CCGCGG | 1 cut(s) | 2876 |
| Kzo9I | GATC | 8 cut(s) | 88, 160, 454, 550, 760, 1165, 1616, 2440 |
| LmnI | GCTCC | 6 cut(s) | 4, 252, 403, 896, 2680, 2722 |
| Lsp1109I | GCAGC | 5 cut(s) | 56, 521, 1073, 1260, 2418 |
| LweI | GCATC | 7 cut(s) | 486, 985, 1167, 2076, 2125, 2228, 2540 |
| MaeI | CTAG | 7 cut(s) | 627, 827, 1001, 1082, 2216, 2270, 2625 |
| MaeII | ACGT | 5 cut(s) | 615, 706, 1281, 1570, 2736 |
| MaeIII | GTNAC | 5 cut(s) | 434, 1224, 1541, 1939, 2312 |
| MalI | GATC | 8 cut(s) | 90, 162, 456, 552, 762, 1167, 1618, 2442 |
| MbiI | CCGCTC | 1 cut(s) | 2611 |
| MboI | GATC | 8 cut(s) | 88, 160, 454, 550, 760, 1165, 1616, 2440 |
| MfeI | CAATTG | 2 cut(s) | 258, 2337 |
| MflI | RGATCY | 1 cut(s) | 1616 |
| MhlI | GDGCHC | 1 cut(s) | 249 |
| MlyI | GAGTC | 9 cut(s) | 275, 567, 628, 1232, 1549, 1789, 2342, 2578, 2700 |
| MmeI | TCCRAC | 4 cut(s) | 1467, 1716, 1854, 2498 |
| Mph1103I | ATGCAT | 2 cut(s) | 796, 1182 |
| MroI | TCCGGA | 1 cut(s) | 2719 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1023 |
| MspA1I | CMGCKG | 1 cut(s) | 2875 |
| MspI | CCGG | 5 cut(s) | 671, 1239, 2720, 2824, 2890 |
| MspR9I | CCNGG | 5 cut(s) | 671, 672, 1239, 1240, 1333 |
| MunI | CAATTG | 2 cut(s) | 258, 2337 |
| Mva1269I | GAATGC | 5 cut(s) | 585, 794, 1320, 1363, 2456 |
| MvaI | CCWGG | 1 cut(s) | 1333 |
| MvnI | CGCG | 2 cut(s) | 145, 2875 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 13, 1465, 2140, 2228 |
| NciI | CCSGG | 4 cut(s) | 671, 672, 1239, 1240 |
| NdeII | GATC | 8 cut(s) | 88, 160, 454, 550, 760, 1165, 1616, 2440 |
| NlaIII | CATG | 9 cut(s) | 725, 770, 794, 845, 1184, 1476, 1508, 1596, 2834 |
| NlaIV | GGNNCC | 5 cut(s) | 399, 892, 1329, 1908, 2924 |
| NmuCI | GTSAC | 4 cut(s) | 434, 1224, 1541, 2312 |
| NsiI | ATGCAT | 2 cut(s) | 796, 1182 |
| NspI | RCATGY | 4 cut(s) | 794, 845, 1476, 1596 |
| PaeI | GCATGC | 1 cut(s) | 794 |
| PagI | TCATGA | 1 cut(s) | 721 |
| PceI | AGGCCT | 1 cut(s) | 864 |
| PciI | ACATGT | 2 cut(s) | 841, 1592 |
| PctI | GAATGC | 5 cut(s) | 585, 794, 1320, 1363, 2456 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1023 |
| PkrI | GCNGC | 8 cut(s) | 46, 49, 511, 1063, 1250, 2408, 2613, 2869 |
| PleI | GAGTC | 9 cut(s) | 274, 566, 627, 1231, 1548, 1788, 2341, 2578, 2700 |
| PpsI | GAGTC | 9 cut(s) | 274, 566, 627, 1231, 1548, 1788, 2341, 2578, 2700 |
| PpuMI | RGGWCCY | 2 cut(s) | 953, 1327 |
| PscI | ACATGT | 2 cut(s) | 841, 1592 |
| PshAI | GACNNNNGTC | 2 cut(s) | 618, 1779 |
| PsiI | TTATAA | 1 cut(s) | 569 |
| Psp124BI | GAGCTC | 1 cut(s) | 249 |
| Psp1406I | AACGTT | 2 cut(s) | 706, 2736 |
| Psp5II | RGGWCCY | 2 cut(s) | 953, 1327 |
| Psp6I | CCWGG | 1 cut(s) | 1331 |
| PspFI | CCCAGC | 1 cut(s) | 2595 |
| PspGI | CCWGG | 1 cut(s) | 1331 |
| PspN4I | GGNNCC | 5 cut(s) | 399, 892, 1329, 1908, 2924 |
| PspPI | GGNCC | 3 cut(s) | 668, 953, 1327 |
| PspPPI | RGGWCCY | 2 cut(s) | 953, 1327 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1266, 1298 |
| PstI | CTGCAG | 1 cut(s) | 353 |
| PsuI | RGATCY | 1 cut(s) | 1616 |
| RsaI | GTAC | 4 cut(s) | 411, 1303, 1891, 2542 |
| RsaNI | GTAC | 4 cut(s) | 410, 1302, 1890, 2541 |
| SacI | GAGCTC | 1 cut(s) | 249 |
| SacII | CCGCGG | 1 cut(s) | 2876 |
| SatI | GCNGC | 8 cut(s) | 45, 48, 510, 1062, 1249, 2407, 2612, 2868 |
| Sau3AI | GATC | 8 cut(s) | 88, 160, 454, 550, 760, 1165, 1616, 2440 |
| Sau96I | GGNCC | 3 cut(s) | 668, 953, 1327 |
| SchI | GAGTC | 9 cut(s) | 275, 567, 628, 1232, 1549, 1789, 2342, 2578, 2700 |
| ScrFI | CCNGG | 5 cut(s) | 671, 672, 1239, 1240, 1333 |
| SduI | GDGCHC | 1 cut(s) | 249 |
| SfaNI | GCATC | 7 cut(s) | 486, 985, 1167, 2076, 2125, 2228, 2540 |
| SfcI | CTRYAG | 2 cut(s) | 349, 2528 |
| Sfr303I | CCGCGG | 1 cut(s) | 2876 |
| SgrBI | CCGCGG | 1 cut(s) | 2876 |
| SinI | GGWCC | 2 cut(s) | 953, 1327 |
| SmaI | CCCGGG | 2 cut(s) | 672, 1240 |
| SmiI | ATTTAAAT | 1 cut(s) | 1812 |
| SmlI | CTYRAG | 6 cut(s) | 310, 500, 1639, 1708, 1777, 2287 |
| SmoI | CTYRAG | 6 cut(s) | 310, 500, 1639, 1708, 1777, 2287 |
| SphI | GCATGC | 1 cut(s) | 794 |
| SrfI | GCCCGGGC | 1 cut(s) | 672 |
| SseBI | AGGCCT | 1 cut(s) | 864 |
| SsiI | CCGC | 6 cut(s) | 48, 2611, 2677, 2868, 2873, 2875 |
| SspI | AATATT | 4 cut(s) | 1413, 2150, 2197, 2363 |
| SspMI | CTAG | 7 cut(s) | 627, 827, 1001, 1082, 2216, 2270, 2625 |
| SstI | GAGCTC | 1 cut(s) | 249 |
| StuI | AGGCCT | 1 cut(s) | 864 |
| StyD4I | CCNGG | 5 cut(s) | 669, 670, 1237, 1238, 1331 |
| StyI | CCWWGG | 1 cut(s) | 859 |
| SwaI | ATTTAAAT | 1 cut(s) | 1812 |
| TaaI | ACNGT | 3 cut(s) | 1958, 2168, 2403 |
| TaiI | ACGT | 5 cut(s) | 618, 709, 1284, 1573, 2739 |
| TaqI | TCGA | 6 cut(s) | 534, 774, 1461, 1783, 1921, 2499 |
| TauI | GCSGC | 3 cut(s) | 50, 2614, 2870 |
| TscAI | CASTG | 2 cut(s) | 2239, 2317 |
| TseFI | GTSAC | 4 cut(s) | 434, 1224, 1541, 2312 |
| TseI | GCWGC | 5 cut(s) | 44, 509, 1061, 1248, 2406 |
| Tsp45I | GTSAC | 4 cut(s) | 434, 1224, 1541, 2312 |
| TspGWI | ACGGA | 3 cut(s) | 1467, 2109, 2935 |
| TspMI | CCCGGG | 2 cut(s) | 670, 1238 |
| TspRI | CASTG | 2 cut(s) | 2239, 2317 |
| VpaK11BI | GGWCC | 2 cut(s) | 953, 1327 |
| XbaI | TCTAGA | 3 cut(s) | 826, 2215, 2624 |
| XceI | RCATGY | 4 cut(s) | 794, 845, 1476, 1596 |
| XmaI | CCCGGG | 2 cut(s) | 670, 1238 |
| XmiI | GTMKAC | 1 cut(s) | 1275 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1023 |
| XspI | CTAG | 7 cut(s) | 627, 827, 1001, 1082, 2216, 2270, 2625 |
| Zsp2I | ATGCAT | 2 cut(s) | 796, 1182 |