DNA repair
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 258, 273, 1253 |
| AccBSI | CCGCTC | 1 cut(s) | 1096 |
| AccI | GTMKAC | 1 cut(s) | 1471 |
| AccIII | TCCGGA | 1 cut(s) | 1542 |
| AciI | CCGC | 2 cut(s) | 107, 1096 |
| AclWI | GGATC | 4 cut(s) | 76, 185, 1341, 1354 |
| AcsI | RAATTY | 5 cut(s) | 9, 1245, 1499, 1515, 1528 |
| AdeI | CACNNNGTG | 1 cut(s) | 689 |
| AfaI | GTAC | 5 cut(s) | 43, 96, 128, 760, 1127 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 404, 818 |
| AjiI | CACGTC | 1 cut(s) | 689 |
| AjnI | CCWGG | 3 cut(s) | 294, 854, 1087 |
| AluBI | AGCT | 4 cut(s) | 53, 169, 625, 1221 |
| AluI | AGCT | 4 cut(s) | 53, 169, 625, 1221 |
| Alw21I | GWGCWC | 1 cut(s) | 627 |
| AlwI | GGATC | 4 cut(s) | 76, 185, 1341, 1354 |
| Aor13HI | TCCGGA | 1 cut(s) | 1542 |
| AoxI | GGCC | 3 cut(s) | 103, 331, 709 |
| ApeKI | GCWGC | 1 cut(s) | 4 |
| ApoI | RAATTY | 5 cut(s) | 9, 1245, 1499, 1515, 1528 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1528 |
| AspS9I | GGNCC | 3 cut(s) | 104, 374, 592 |
| AsuHPI | GGTGA | 6 cut(s) | 172, 392, 482, 527, 1068, 1189 |
| AsuII | TTCGAA | 1 cut(s) | 838 |
| AvaII | GGWCC | 2 cut(s) | 374, 592 |
| AxyI | CCTNAGG | 1 cut(s) | 1557 |
| BamHI | GGATCC | 1 cut(s) | 1346 |
| BanII | GRGCYC | 1 cut(s) | 627 |
| BbsI | GAAGAC | 1 cut(s) | 612 |
| Bbv12I | GWGCWC | 1 cut(s) | 627 |
| BbvI | GCAGC | 1 cut(s) | 16 |
| BccI | CCATC | 3 cut(s) | 720, 1004, 1225 |
| BceAI | ACGGC | 1 cut(s) | 1177 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 625, 659 |
| BciT130I | CCWGG | 3 cut(s) | 296, 856, 1089 |
| BclI | TGATCA | 1 cut(s) | 531 |
| BfaI | CTAG | 3 cut(s) | 86, 1040, 1572 |
| BisI | GCNGC | 1 cut(s) | 5 |
| BlsI | GCNGC | 1 cut(s) | 6 |
| Bme1390I | CCNGG | 3 cut(s) | 296, 856, 1089 |
| Bme18I | GGWCC | 2 cut(s) | 374, 592 |
| BmgBI | CACGTC | 1 cut(s) | 689 |
| BmgT120I | GGNCC | 3 cut(s) | 104, 374, 592 |
| BmiI | GGNNCC | 2 cut(s) | 1348, 1511 |
| BmrFI | CCNGG | 3 cut(s) | 296, 856, 1089 |
| BmsI | GCATC | 4 cut(s) | 227, 841, 1120, 1268 |
| BpiI | GAAGAC | 1 cut(s) | 612 |
| BpmI | CTGGAG | 2 cut(s) | 497, 948 |
| Bpu14I | TTCGAA | 1 cut(s) | 838 |
| BpuEI | CTTGAG | 2 cut(s) | 641, 690 |
| BsaAI | YACGTR | 1 cut(s) | 45 |
| BsaJI | CCNNGG | 2 cut(s) | 403, 855 |
| BsaWI | WCCGGW | 1 cut(s) | 1542 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 29, 59 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 404, 818 |
| Bse1I | ACTGG | 1 cut(s) | 480 |
| Bse21I | CCTNAGG | 1 cut(s) | 1557 |
| Bse3DI | GCAATG | 4 cut(s) | 329, 643, 888, 1489 |
| BseAI | TCCGGA | 1 cut(s) | 1542 |
| BseBI | CCWGG | 3 cut(s) | 296, 856, 1089 |
| BseDI | CCNNGG | 2 cut(s) | 403, 855 |
| BseGI | GGATG | 2 cut(s) | 712, 1283 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 404, 818 |
| BseMI | GCAATG | 4 cut(s) | 329, 643, 888, 1489 |
| BseNI | ACTGG | 1 cut(s) | 480 |
| BseRI | GAGGAG | 1 cut(s) | 819 |
| BseXI | GCAGC | 1 cut(s) | 16 |
| BseYI | CCCAGC | 1 cut(s) | 1341 |
| BshFI | GGCC | 3 cut(s) | 105, 333, 711 |
| BsiHKAI | GWGCWC | 1 cut(s) | 627 |
| BsiSI | CCGG | 1 cut(s) | 1543 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 404, 818 |
| BsmI | GAATGC | 2 cut(s) | 1216, 1376 |
| BsnI | GGCC | 3 cut(s) | 105, 333, 711 |
| Bsp119I | TTCGAA | 1 cut(s) | 838 |
| Bsp1286I | GDGCHC | 1 cut(s) | 627 |
| Bsp13I | TCCGGA | 1 cut(s) | 1542 |
| Bsp143I | GATC | 5 cut(s) | 69, 81, 190, 531, 1346 |
| BspACI | CCGC | 2 cut(s) | 107, 1096 |
| BspANI | GGCC | 3 cut(s) | 105, 333, 711 |
| BspEI | TCCGGA | 1 cut(s) | 1542 |
| BspHI | TCATGA | 1 cut(s) | 1114 |
| BspLI | GGNNCC | 2 cut(s) | 1348, 1511 |
| BspPI | GGATC | 4 cut(s) | 76, 185, 1341, 1354 |
| BspT104I | TTCGAA | 1 cut(s) | 838 |
| BsrBI | CCGCTC | 1 cut(s) | 1096 |
| BsrDI | GCAATG | 4 cut(s) | 329, 643, 888, 1489 |
| BsrI | ACTGG | 1 cut(s) | 480 |
| BssECI | CCNNGG | 2 cut(s) | 403, 855 |
| BssMI | GATC | 5 cut(s) | 69, 81, 190, 531, 1346 |
| BssNAI | GTATAC | 1 cut(s) | 1472 |
| Bst1107I | GTATAC | 1 cut(s) | 1472 |
| Bst2UI | CCWGG | 3 cut(s) | 296, 856, 1089 |
| Bst4CI | ACNGT | 4 cut(s) | 253, 429, 1130, 1436 |
| Bst6I | CTCTTC | 1 cut(s) | 360 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 689 |
| BstBAI | YACGTR | 1 cut(s) | 45 |
| BstBI | TTCGAA | 1 cut(s) | 838 |
| BstC8I | GCNNGC | 4 cut(s) | 107, 774, 895, 1094 |
| BstDEI | CTNAG | 4 cut(s) | 359, 1403, 1520, 1557 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 402, 816 |
| BstF5I | GGATG | 2 cut(s) | 712, 1283 |
| BstKTI | GATC | 5 cut(s) | 72, 84, 193, 534, 1349 |
| BstMBI | GATC | 5 cut(s) | 69, 81, 190, 531, 1346 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 689 |
| BstNI | CCWGG | 3 cut(s) | 296, 856, 1089 |
| BstNSI | RCATGY | 3 cut(s) | 776, 897, 1412 |
| BstSCI | CCNGG | 3 cut(s) | 294, 854, 1087 |
| BstSNI | TACGTA | 1 cut(s) | 45 |
| BstV1I | GCAGC | 1 cut(s) | 16 |
| BstV2I | GAAGAC | 1 cut(s) | 612 |
| BstX2I | RGATCY | 2 cut(s) | 81, 1346 |
| BstYI | RGATCY | 2 cut(s) | 81, 1346 |
| BstZ17I | GTATAC | 1 cut(s) | 1472 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1557 |
| BsuRI | GGCC | 3 cut(s) | 105, 333, 711 |
| BtrI | CACGTC | 1 cut(s) | 689 |
| BtsCI | GGATG | 2 cut(s) | 712, 1283 |
| BtsIMutI | CAGTG | 1 cut(s) | 1441 |
| Cac8I | GCNNGC | 4 cut(s) | 107, 774, 895, 1094 |
| CciI | TCATGA | 1 cut(s) | 1114 |
| Cfr13I | GGNCC | 3 cut(s) | 104, 374, 592 |
| Csp6I | GTAC | 5 cut(s) | 42, 95, 127, 759, 1126 |
| CviAII | CATG | 5 cut(s) | 773, 894, 1031, 1115, 1409 |
| CviQI | GTAC | 5 cut(s) | 42, 95, 127, 759, 1126 |
| DdeI | CTNAG | 4 cut(s) | 359, 1403, 1520, 1557 |
| DpnI | GATC | 5 cut(s) | 71, 83, 192, 533, 1348 |
| DpnII | GATC | 5 cut(s) | 69, 81, 190, 531, 1346 |
| DraIII | CACNNNGTG | 1 cut(s) | 689 |
| Eam1104I | CTCTTC | 1 cut(s) | 360 |
| EarI | CTCTTC | 1 cut(s) | 360 |
| Ecl136II | GAGCTC | 1 cut(s) | 625 |
| Eco105I | TACGTA | 1 cut(s) | 45 |
| Eco147I | AGGCCT | 1 cut(s) | 333 |
| Eco24I | GRGCYC | 1 cut(s) | 627 |
| Eco47I | GGWCC | 2 cut(s) | 374, 592 |
| Eco53kI | GAGCTC | 1 cut(s) | 625 |
| Eco81I | CCTNAGG | 1 cut(s) | 1557 |
| EcoICRI | GAGCTC | 1 cut(s) | 625 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 402, 816 |
| EcoRI | GAATTC | 1 cut(s) | 1515 |
| EcoRII | CCWGG | 3 cut(s) | 294, 854, 1087 |
| EcoT22I | ATGCAT | 2 cut(s) | 1032, 1283 |
| EcoT38I | GRGCYC | 1 cut(s) | 627 |
| FaeI | CATG | 5 cut(s) | 776, 897, 1034, 1118, 1412 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 434, 466 |
| FatI | CATG | 5 cut(s) | 772, 893, 1030, 1114, 1408 |
| FauI | CCCGC | 1 cut(s) | 114 |
| FauNDI | CATATG | 1 cut(s) | 700 |
| FbaI | TGATCA | 1 cut(s) | 531 |
| FblI | GTMKAC | 1 cut(s) | 1471 |
| Fnu4HI | GCNGC | 1 cut(s) | 5 |
| FokI | GGATG | 2 cut(s) | 699, 1290 |
| FriOI | GRGCYC | 1 cut(s) | 627 |
| Fsp4HI | GCNGC | 1 cut(s) | 5 |
| FspBI | CTAG | 3 cut(s) | 86, 1040, 1572 |
| GluI | GCNGC | 1 cut(s) | 5 |
| GsaI | CCCAGC | 1 cut(s) | 1345 |
| GsuI | CTGGAG | 2 cut(s) | 497, 948 |
| HaeIII | GGCC | 3 cut(s) | 105, 333, 711 |
| HapII | CCGG | 1 cut(s) | 1543 |
| Hin1II | CATG | 5 cut(s) | 776, 897, 1034, 1118, 1412 |
| HincII | GTYRAC | 1 cut(s) | 391 |
| HindII | GTYRAC | 1 cut(s) | 391 |
| HindIII | AAGCTT | 2 cut(s) | 167, 1219 |
| HinfI | GANTC | 9 cut(s) | 143, 225, 352, 445, 794, 949, 1073, 1333, 1568 |
| HpaII | CCGG | 1 cut(s) | 1543 |
| HphI | GGTGA | 6 cut(s) | 172, 392, 482, 527, 1068, 1189 |
| Hpy166II | GTNNAC | 5 cut(s) | 76, 391, 473, 1126, 1472 |
| Hpy188I | TCNGA | 3 cut(s) | 69, 647, 1514 |
| Hpy8I | GTNNAC | 5 cut(s) | 76, 391, 473, 1126, 1472 |
| Hpy99I | CGWCG | 1 cut(s) | 690 |
| HpyAV | CCTTC | 5 cut(s) | 275, 323, 652, 669, 1447 |
| HpyCH4III | ACNGT | 4 cut(s) | 253, 429, 1130, 1436 |
| HpyCH4IV | ACGT | 4 cut(s) | 44, 573, 688, 1418 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 689 |
| HpyF3I | CTNAG | 4 cut(s) | 359, 1403, 1520, 1557 |
| HpySE526I | ACGT | 4 cut(s) | 44, 573, 688, 1418 |
| Hsp92II | CATG | 5 cut(s) | 776, 897, 1034, 1118, 1412 |
| Kpn2I | TCCGGA | 1 cut(s) | 1542 |
| Ksp22I | TGATCA | 1 cut(s) | 531 |
| Kzo9I | GATC | 5 cut(s) | 69, 81, 190, 531, 1346 |
| LmnI | GCTCC | 1 cut(s) | 478 |
| Lsp1109I | GCAGC | 1 cut(s) | 16 |
| LweI | GCATC | 4 cut(s) | 227, 841, 1120, 1268 |
| MaeI | CTAG | 3 cut(s) | 86, 1040, 1572 |
| MaeII | ACGT | 4 cut(s) | 44, 573, 688, 1418 |
| MaeIII | GTNAC | 3 cut(s) | 927, 1414, 1436 |
| MalI | GATC | 5 cut(s) | 71, 83, 192, 533, 1348 |
| MbiI | CCGCTC | 1 cut(s) | 1096 |
| MboI | GATC | 5 cut(s) | 69, 81, 190, 531, 1346 |
| MboII | GAAGA | 9 cut(s) | 347, 454, 617, 892, 989, 1022, 1082, 1130, 1349 |
| MfeI | CAATTG | 3 cut(s) | 264, 1393, 1448 |
| MflI | RGATCY | 2 cut(s) | 81, 1346 |
| MhlI | GDGCHC | 1 cut(s) | 627 |
| MlyI | GAGTC | 2 cut(s) | 152, 346 |
| MmeI | TCCRAC | 3 cut(s) | 115, 364, 762 |
| Mph1103I | ATGCAT | 2 cut(s) | 1032, 1283 |
| MroI | TCCGGA | 1 cut(s) | 1542 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1528 |
| MseI | TTAA | 8 cut(s) | 452, 485, 629, 726, 938, 1025, 1164, 1503 |
| MslI | CAYNNNNRTG | 3 cut(s) | 114, 1119, 1175 |
| MspI | CCGG | 1 cut(s) | 1543 |
| MspR9I | CCNGG | 3 cut(s) | 296, 856, 1089 |
| MunI | CAATTG | 3 cut(s) | 264, 1393, 1448 |
| Mva1269I | GAATGC | 2 cut(s) | 1216, 1376 |
| MvaI | CCWGG | 3 cut(s) | 296, 856, 1089 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 689 |
| NdeI | CATATG | 1 cut(s) | 700 |
| NdeII | GATC | 5 cut(s) | 69, 81, 190, 531, 1346 |
| NlaIII | CATG | 5 cut(s) | 776, 897, 1034, 1118, 1412 |
| NlaIV | GGNNCC | 2 cut(s) | 1348, 1511 |
| NmuCI | GTSAC | 2 cut(s) | 1414, 1436 |
| NsiI | ATGCAT | 2 cut(s) | 1032, 1283 |
| NspI | RCATGY | 3 cut(s) | 776, 897, 1412 |
| NspV | TTCGAA | 1 cut(s) | 838 |
| PaeI | GCATGC | 2 cut(s) | 776, 897 |
| PagI | TCATGA | 1 cut(s) | 1114 |
| PceI | AGGCCT | 1 cut(s) | 333 |
| PctI | GAATGC | 2 cut(s) | 1216, 1376 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1528 |
| PfeI | GAWTC | 7 cut(s) | 225, 445, 794, 949, 1073, 1333, 1568 |
| PkrI | GCNGC | 1 cut(s) | 6 |
| PleI | GAGTC | 2 cut(s) | 151, 346 |
| PpsI | GAGTC | 2 cut(s) | 151, 346 |
| Ppu21I | YACGTR | 1 cut(s) | 45 |
| PsiI | TTATAA | 3 cut(s) | 258, 273, 1253 |
| Psp124BI | GAGCTC | 1 cut(s) | 627 |
| Psp6I | CCWGG | 3 cut(s) | 294, 854, 1087 |
| PspFI | CCCAGC | 1 cut(s) | 1341 |
| PspGI | CCWGG | 3 cut(s) | 294, 854, 1087 |
| PspN4I | GGNNCC | 2 cut(s) | 1348, 1511 |
| PspPI | GGNCC | 3 cut(s) | 104, 374, 592 |
| PsuI | RGATCY | 2 cut(s) | 81, 1346 |
| RsaI | GTAC | 5 cut(s) | 43, 96, 128, 760, 1127 |
| RsaNI | GTAC | 5 cut(s) | 42, 95, 127, 759, 1126 |
| RseI | CAYNNNNRTG | 3 cut(s) | 114, 1119, 1175 |
| SacI | GAGCTC | 1 cut(s) | 627 |
| SaqAI | TTAA | 8 cut(s) | 452, 485, 629, 726, 938, 1025, 1164, 1503 |
| SatI | GCNGC | 1 cut(s) | 5 |
| Sau3AI | GATC | 5 cut(s) | 69, 81, 190, 531, 1346 |
| Sau96I | GGNCC | 3 cut(s) | 104, 374, 592 |
| SchI | GAGTC | 2 cut(s) | 152, 346 |
| ScrFI | CCNGG | 3 cut(s) | 296, 856, 1089 |
| SduI | GDGCHC | 1 cut(s) | 627 |
| SfaNI | GCATC | 4 cut(s) | 227, 841, 1120, 1268 |
| SfuI | TTCGAA | 1 cut(s) | 838 |
| SinI | GGWCC | 2 cut(s) | 374, 592 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 114, 1119, 1175 |
| SmlI | CTYRAG | 2 cut(s) | 620, 705 |
| SmoI | CTYRAG | 2 cut(s) | 620, 705 |
| SnaBI | TACGTA | 1 cut(s) | 45 |
| SphI | GCATGC | 2 cut(s) | 776, 897 |
| SseBI | AGGCCT | 1 cut(s) | 333 |
| SsiI | CCGC | 2 cut(s) | 107, 1096 |
| SspI | AATATT | 2 cut(s) | 936, 1354 |
| SspMI | CTAG | 3 cut(s) | 86, 1040, 1572 |
| SstI | GAGCTC | 1 cut(s) | 627 |
| StuI | AGGCCT | 1 cut(s) | 333 |
| StyD4I | CCNGG | 3 cut(s) | 294, 854, 1087 |
| TaaI | ACNGT | 4 cut(s) | 253, 429, 1130, 1436 |
| TaiI | ACGT | 4 cut(s) | 47, 576, 691, 1421 |
| TaqI | TCGA | 4 cut(s) | 307, 838, 885, 1227 |
| TatI | WGTACW | 2 cut(s) | 94, 758 |
| TfiI | GAWTC | 7 cut(s) | 225, 445, 794, 949, 1073, 1333, 1568 |
| Tru1I | TTAA | 8 cut(s) | 452, 485, 629, 726, 938, 1025, 1164, 1503 |
| Tru9I | TTAA | 8 cut(s) | 452, 485, 629, 726, 938, 1025, 1164, 1503 |
| TscAI | CASTG | 1 cut(s) | 1441 |
| TseFI | GTSAC | 2 cut(s) | 1414, 1436 |
| TseI | GCWGC | 1 cut(s) | 4 |
| Tsp45I | GTSAC | 2 cut(s) | 1414, 1436 |
| TspDTI | ATGAA | 5 cut(s) | 63, 786, 1083, 1098, 1131 |
| TspGWI | ACGGA | 3 cut(s) | 183, 705, 816 |
| TspRI | CASTG | 1 cut(s) | 1441 |
| VpaK11BI | GGWCC | 2 cut(s) | 374, 592 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 402, 816 |
| XapI | RAATTY | 5 cut(s) | 9, 1245, 1499, 1515, 1528 |
| XbaI | TCTAGA | 1 cut(s) | 1571 |
| XceI | RCATGY | 3 cut(s) | 776, 897, 1412 |
| XmiI | GTMKAC | 1 cut(s) | 1471 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1528 |
| XspI | CTAG | 3 cut(s) | 86, 1040, 1572 |
| Zsp2I | ATGCAT | 2 cut(s) | 1032, 1283 |