TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 23 - 186 | 1.4e-51 | TIR domain |
| TIR_2 | PF13676 | 25 - 120 | 2.4e-12 | TIR domain |
| NB-ARC | PF00931 | 203 - 374 | 3.9e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 445 - 511 | 1e-12 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 703 - 786 | 3.7e-14 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 720 - 786 | 1e-05 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 837 - 933 | 3.4e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1715, 3414 |
| Acc16I | TGCGCA | 1 cut(s) | 2137 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2726 |
| AccII | CGCG | 1 cut(s) | 2567 |
| AciI | CCGC | 8 cut(s) | 504, 549, 645, 684, 1414, 1768, 1858, 2967 |
| AclWI | GGATC | 5 cut(s) | 158, 232, 350, 363, 2100 |
| AcoI | YGGCCR | 3 cut(s) | 3, 335, 2728 |
| AcuI | CTGAAG | 2 cut(s) | 2004, 2345 |
| AcyI | GRCGYC | 1 cut(s) | 3302 |
| AdeI | CACNNNGTG | 1 cut(s) | 73 |
| AfaI | GTAC | 3 cut(s) | 657, 2342, 3156 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 273, 2024, 2374, 2726, 2966, 3447 |
| AflIII | ACRYGT | 1 cut(s) | 3181 |
| AhlI | ACTAGT | 2 cut(s) | 289, 2074 |
| AjiI | CACGTC | 1 cut(s) | 1387 |
| AjnI | CCWGG | 5 cut(s) | 1194, 1549, 2031, 2086, 2109 |
| Alw21I | GWGCWC | 3 cut(s) | 1997, 2715, 2895 |
| Alw26I | GTCTC | 2 cut(s) | 2443, 2836 |
| Alw44I | GTGCAC | 2 cut(s) | 1993, 2891 |
| AlwI | GGATC | 5 cut(s) | 158, 232, 350, 363, 2100 |
| Ama87I | CYCGRG | 3 cut(s) | 499, 609, 1424 |
| AoxI | GGCC | 4 cut(s) | 3, 335, 1781, 2728 |
| ApaLI | GTGCAC | 2 cut(s) | 1993, 2891 |
| ApeKI | GCWGC | 9 cut(s) | 458, 473, 750, 990, 1854, 2301, 2685, 3100, 3199 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 291, 2391, 2703 |
| AspA2I | CCTAGG | 1 cut(s) | 1277 |
| AspLEI | GCGC | 3 cut(s) | 417, 1284, 2138 |
| AspS9I | GGNCC | 2 cut(s) | 943, 3322 |
| AsuHPI | GGTGA | 5 cut(s) | 404, 1565, 2006, 3376, 3416 |
| AvaI | CYCGRG | 3 cut(s) | 499, 609, 1424 |
| AvaII | GGWCC | 2 cut(s) | 943, 3322 |
| AvrII | CCTAGG | 1 cut(s) | 1277 |
| BaeGI | GKGCMC | 3 cut(s) | 1997, 2351, 2895 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BamHI | GGATCC | 1 cut(s) | 355 |
| BanII | GRGCYC | 1 cut(s) | 2715 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1647, 1679 |
| BauI | CACGAG | 1 cut(s) | 2689 |
| BbsI | GAAGAC | 3 cut(s) | 238, 701, 3354 |
| Bbv12I | GWGCWC | 3 cut(s) | 1997, 2715, 2895 |
| BbvI | GCAGC | 9 cut(s) | 470, 485, 737, 1002, 1866, 2313, 2672, 3087, 3186 |
| BccI | CCATC | 9 cut(s) | 14, 367, 444, 737, 1250, 1307, 1507, 2815, 2860 |
| BceAI | ACGGC | 1 cut(s) | 1003 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 242, 276, 2677, 2711 |
| BciT130I | CCWGG | 5 cut(s) | 1196, 1551, 2033, 2088, 2111 |
| BciVI | GTATCC | 2 cut(s) | 91, 2021 |
| BclI | TGATCA | 4 cut(s) | 1302, 2643, 3091, 3187 |
| BcoDI | GTCTC | 2 cut(s) | 2443, 2836 |
| BcuI | ACTAGT | 2 cut(s) | 289, 2074 |
| BfaI | CTAG | 8 cut(s) | 290, 602, 1070, 1278, 1505, 1796, 1979, 2075 |
| BfmI | CTRYAG | 1 cut(s) | 1542 |
| BfuI | GTATCC | 2 cut(s) | 91, 2021 |
| BglII | AGATCT | 1 cut(s) | 1981 |
| BlnI | CCTAGG | 1 cut(s) | 1277 |
| BmcAI | AGTACT | 1 cut(s) | 3156 |
| Bme1390I | CCNGG | 5 cut(s) | 1196, 1551, 2033, 2088, 2111 |
| Bme18I | GGWCC | 2 cut(s) | 943, 3322 |
| BmeT110I | CYCGRG | 3 cut(s) | 499, 609, 1424 |
| BmgBI | CACGTC | 1 cut(s) | 1387 |
| BmgT120I | GGNCC | 2 cut(s) | 943, 3322 |
| BmiI | GGNNCC | 3 cut(s) | 357, 2475, 3323 |
| BmrFI | CCNGG | 5 cut(s) | 1196, 1551, 2033, 2088, 2111 |
| BpiI | GAAGAC | 3 cut(s) | 238, 701, 3354 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 445, 477 |
| BpmI | CTGGAG | 3 cut(s) | 2122, 2165, 2860 |
| BpuEI | CTTGAG | 3 cut(s) | 1109, 1161, 1690 |
| BsaHI | GRCGYC | 1 cut(s) | 3302 |
| BsaJI | CCNNGG | 7 cut(s) | 301, 376, 1194, 1277, 2109, 2510, 2720 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 783, 813, 1731, 1761, 2833, 2863 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 273, 2024, 2374, 2726, 2966, 3447 |
| Bse118I | RCCGGY | 1 cut(s) | 2730 |
| Bse1I | ACTGG | 5 cut(s) | 946, 1615, 2105, 2212, 2954 |
| Bse3DI | GCAATG | 2 cut(s) | 1350, 3248 |
| BseBI | CCWGG | 5 cut(s) | 1196, 1551, 2033, 2088, 2111 |
| BseDI | CCNNGG | 7 cut(s) | 301, 376, 1194, 1277, 2109, 2510, 2720 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 273, 2024, 2374, 2726, 2966, 3447 |
| BseMI | GCAATG | 2 cut(s) | 1350, 3248 |
| BseMII | CTCAG | 3 cut(s) | 71, 2939, 3288 |
| BseNI | ACTGG | 5 cut(s) | 946, 1615, 2105, 2212, 2954 |
| BseRI | GAGGAG | 2 cut(s) | 198, 2831 |
| BseSI | GKGCMC | 3 cut(s) | 1997, 2351, 2895 |
| BseXI | GCAGC | 9 cut(s) | 470, 485, 737, 1002, 1866, 2313, 2672, 3087, 3186 |
| BseYI | CCCAGC | 1 cut(s) | 962 |
| BsgI | GTGCAG | 3 cut(s) | 1607, 2671, 3185 |
| Bsh1236I | CGCG | 1 cut(s) | 2567 |
| BshFI | GGCC | 4 cut(s) | 5, 337, 1783, 2730 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1997, 2715, 2895 |
| BsiHKCI | CYCGRG | 3 cut(s) | 499, 609, 1424 |
| BsiSI | CCGG | 1 cut(s) | 2731 |
| BslFI | GGGAC | 3 cut(s) | 220, 2554, 3071 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 273, 2024, 2374, 2726, 2966, 3447 |
| BsmAI | GTCTC | 2 cut(s) | 2443, 2836 |
| BsmBI | CGTCTC | 1 cut(s) | 2443 |
| BsmFI | GGGAC | 3 cut(s) | 220, 2554, 3071 |
| BsmI | GAATGC | 2 cut(s) | 1284, 2642 |
| BsnI | GGCC | 4 cut(s) | 5, 337, 1783, 2730 |
| BsoBI | CYCGRG | 3 cut(s) | 499, 609, 1424 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1997, 2351, 2715, 2895 |
| BspACI | CCGC | 8 cut(s) | 504, 549, 645, 684, 1414, 1768, 1858, 2967 |
| BspANI | GGCC | 4 cut(s) | 5, 337, 1783, 2730 |
| BspCNI | CTCAG | 3 cut(s) | 72, 2938, 3289 |
| BspFNI | CGCG | 1 cut(s) | 2567 |
| BspHI | TCATGA | 3 cut(s) | 865, 1063, 1299 |
| BspLI | GGNNCC | 3 cut(s) | 357, 2475, 3323 |
| BspPI | GGATC | 5 cut(s) | 158, 232, 350, 363, 2100 |
| BspQI | GCTCTTC | 1 cut(s) | 2321 |
| BsrDI | GCAATG | 2 cut(s) | 1350, 3248 |
| BsrFI | RCCGGY | 1 cut(s) | 2730 |
| BsrI | ACTGG | 5 cut(s) | 946, 1615, 2105, 2212, 2954 |
| BssAI | RCCGGY | 1 cut(s) | 2730 |
| BssECI | CCNNGG | 7 cut(s) | 301, 376, 1194, 1277, 2109, 2510, 2720 |
| BssNI | GRCGYC | 1 cut(s) | 3302 |
| BssSI | CACGAG | 1 cut(s) | 2689 |
| BssT1I | CCWWGG | 5 cut(s) | 301, 376, 1277, 2510, 2720 |
| Bst2BI | CACGAG | 1 cut(s) | 2689 |
| Bst2UI | CCWGG | 5 cut(s) | 1196, 1551, 2033, 2088, 2111 |
| Bst4CI | ACNGT | 8 cut(s) | 1149, 1162, 1330, 1339, 1731, 1974, 2426, 3018 |
| Bst6I | CTCTTC | 6 cut(s) | 40, 534, 1503, 2250, 2321, 2909 |
| BstACI | GRCGYC | 1 cut(s) | 3302 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1501, 1851 |
| BstC8I | GCNNGC | 5 cut(s) | 1245, 1493, 1847, 2461, 2895 |
| BstDEI | CTNAG | 6 cut(s) | 80, 825, 1933, 1985, 2925, 3297 |
| BstFNI | CGCG | 1 cut(s) | 2567 |
| BstHHI | GCGC | 3 cut(s) | 417, 1284, 2138 |
| BstMAI | GTCTC | 2 cut(s) | 2443, 2836 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1501, 1555, 1851, 3250 |
| BstNI | CCWGG | 5 cut(s) | 1196, 1551, 2033, 2088, 2111 |
| BstNSI | RCATGY | 4 cut(s) | 1359, 1495, 1849, 3185 |
| BstSCI | CCNGG | 5 cut(s) | 1194, 1549, 2031, 2086, 2109 |
| BstSFI | CTRYAG | 1 cut(s) | 1542 |
| BstSLI | GKGCMC | 3 cut(s) | 1997, 2351, 2895 |
| BstUI | CGCG | 1 cut(s) | 2567 |
| BstV1I | GCAGC | 9 cut(s) | 470, 485, 737, 1002, 1866, 2313, 2672, 3087, 3186 |
| BstV2I | GAAGAC | 3 cut(s) | 238, 701, 3354 |
| BstX2I | RGATCY | 3 cut(s) | 355, 1981, 2105 |
| BstYI | RGATCY | 3 cut(s) | 355, 1981, 2105 |
| BsuI | GTATCC | 2 cut(s) | 91, 2021 |
| BsuRI | GGCC | 4 cut(s) | 5, 337, 1783, 2730 |
| BtrI | CACGTC | 1 cut(s) | 1387 |
| BtsIMutI | CAGTG | 3 cut(s) | 1335, 1608, 2205 |
| Cac8I | GCNNGC | 5 cut(s) | 1245, 1493, 1847, 2461, 2895 |
| CciI | TCATGA | 3 cut(s) | 865, 1063, 1299 |
| CfoI | GCGC | 3 cut(s) | 417, 1284, 2138 |
| Cfr10I | RCCGGY | 1 cut(s) | 2730 |
| Cfr13I | GGNCC | 2 cut(s) | 943, 3322 |
| CseI | GACGC | 3 cut(s) | 2556, 3233, 3291 |
| Csp6I | GTAC | 3 cut(s) | 656, 2341, 3155 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1986, 2021, 2358, 2393 |
| CviQI | GTAC | 3 cut(s) | 656, 2341, 3155 |
| DdeI | CTNAG | 6 cut(s) | 80, 825, 1933, 1985, 2925, 3297 |
| DraI | TTTAAA | 2 cut(s) | 1264, 2592 |
| DraIII | CACNNNGTG | 1 cut(s) | 73 |
| EaeI | YGGCCR | 3 cut(s) | 3, 335, 2728 |
| Eam1104I | CTCTTC | 6 cut(s) | 40, 534, 1503, 2250, 2321, 2909 |
| EarI | CTCTTC | 6 cut(s) | 40, 534, 1503, 2250, 2321, 2909 |
| EciI | GGCGGA | 2 cut(s) | 660, 699 |
| Ecl136II | GAGCTC | 1 cut(s) | 2713 |
| Eco130I | CCWWGG | 5 cut(s) | 301, 376, 1277, 2510, 2720 |
| Eco24I | GRGCYC | 1 cut(s) | 2715 |
| Eco32I | GATATC | 1 cut(s) | 2240 |
| Eco47I | GGWCC | 2 cut(s) | 943, 3322 |
| Eco53kI | GAGCTC | 1 cut(s) | 2713 |
| Eco57I | CTGAAG | 2 cut(s) | 2004, 2345 |
| Eco88I | CYCGRG | 3 cut(s) | 499, 609, 1424 |
| EcoICRI | GAGCTC | 1 cut(s) | 2713 |
| EcoRI | GAATTC | 1 cut(s) | 1928 |
| EcoRII | CCWGG | 5 cut(s) | 1194, 1549, 2031, 2086, 2109 |
| EcoRV | GATATC | 1 cut(s) | 2240 |
| EcoT14I | CCWWGG | 5 cut(s) | 301, 376, 1277, 2510, 2720 |
| EcoT22I | ATGCAT | 3 cut(s) | 265, 1497, 2642 |
| EcoT38I | GRGCYC | 1 cut(s) | 2715 |
| ErhI | CCWWGG | 5 cut(s) | 301, 376, 1277, 2510, 2720 |
| Esp3I | CGTCTC | 1 cut(s) | 2443 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 263, 295, 2366, 2398 |
| FaqI | GGGAC | 3 cut(s) | 220, 2554, 3071 |
| FauI | CCCGC | 2 cut(s) | 497, 2960 |
| FbaI | TGATCA | 4 cut(s) | 1302, 2643, 3091, 3187 |
| FriOI | GRGCYC | 1 cut(s) | 2715 |
| FspBI | CTAG | 8 cut(s) | 290, 602, 1070, 1278, 1505, 1796, 1979, 2075 |
| FspI | TGCGCA | 1 cut(s) | 2137 |
| GlaI | GCGC | 3 cut(s) | 416, 1283, 2137 |
| GsaI | CCCAGC | 1 cut(s) | 966 |
| GsuI | CTGGAG | 3 cut(s) | 2122, 2165, 2860 |
| HaeIII | GGCC | 4 cut(s) | 5, 337, 1783, 2730 |
| HapII | CCGG | 1 cut(s) | 2731 |
| HgaI | GACGC | 3 cut(s) | 2556, 3233, 3291 |
| HhaI | GCGC | 3 cut(s) | 417, 1284, 2138 |
| Hin1I | GRCGYC | 1 cut(s) | 3302 |
| Hin6I | GCGC | 3 cut(s) | 415, 1282, 2136 |
| HinP1I | GCGC | 3 cut(s) | 415, 1282, 2136 |
| HincII | GTYRAC | 5 cut(s) | 802, 925, 2047, 2098, 2659 |
| HindII | GTYRAC | 5 cut(s) | 802, 925, 2047, 2098, 2659 |
| HpaI | GTTAAC | 2 cut(s) | 802, 2047 |
| HpaII | CCGG | 1 cut(s) | 2731 |
| HphI | GGTGA | 5 cut(s) | 404, 1565, 2006, 3376, 3416 |
| Hpy99I | CGWCG | 1 cut(s) | 3018 |
| HpyAV | CCTTC | 9 cut(s) | 169, 215, 863, 1120, 1397, 1912, 2028, 2054, 2235 |
| HpyCH4III | ACNGT | 8 cut(s) | 1149, 1162, 1330, 1339, 1731, 1974, 2426, 3018 |
| HpyCH4IV | ACGT | 3 cut(s) | 366, 1386, 1593 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1501, 1555, 1851, 3250 |
| HpyF3I | CTNAG | 6 cut(s) | 80, 825, 1933, 1985, 2925, 3297 |
| HpySE526I | ACGT | 3 cut(s) | 366, 1386, 1593 |
| Hsp92I | GRCGYC | 1 cut(s) | 3302 |
| HspAI | GCGC | 3 cut(s) | 415, 1282, 2136 |
| Ksp22I | TGATCA | 4 cut(s) | 1302, 2643, 3091, 3187 |
| KspAI | GTTAAC | 2 cut(s) | 802, 2047 |
| LguI | GCTCTTC | 1 cut(s) | 2321 |
| LmnI | GCTCC | 3 cut(s) | 2473, 2718, 2791 |
| Lsp1109I | GCAGC | 9 cut(s) | 470, 485, 737, 1002, 1866, 2313, 2672, 3087, 3186 |
| MaeI | CTAG | 8 cut(s) | 290, 602, 1070, 1278, 1505, 1796, 1979, 2075 |
| MaeII | ACGT | 3 cut(s) | 366, 1386, 1593 |
| MaeIII | GTNAC | 6 cut(s) | 983, 1153, 1409, 2426, 2530, 3290 |
| MfeI | CAATTG | 3 cut(s) | 702, 726, 1763 |
| MflI | RGATCY | 3 cut(s) | 355, 1981, 2105 |
| MhlI | GDGCHC | 4 cut(s) | 1997, 2351, 2715, 2895 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 7 cut(s) | 599, 1547, 1681, 2527, 2838, 2907, 3279 |
| MmeI | TCCRAC | 2 cut(s) | 2005, 2420 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| Mph1103I | ATGCAT | 3 cut(s) | 265, 1497, 2642 |
| MroXI | GAANNNNTTC | 3 cut(s) | 291, 2391, 2703 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1216, 1581, 3147, 3356 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspA1I | CMGCKG | 1 cut(s) | 2988 |
| MspI | CCGG | 1 cut(s) | 2731 |
| MspR9I | CCNGG | 5 cut(s) | 1196, 1551, 2033, 2088, 2111 |
| MunI | CAATTG | 3 cut(s) | 702, 726, 1763 |
| Mva1269I | GAATGC | 2 cut(s) | 1284, 2642 |
| MvaI | CCWGG | 5 cut(s) | 1196, 1551, 2033, 2088, 2111 |
| MvnI | CGCG | 1 cut(s) | 2567 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1501, 1555, 1851, 3250 |
| NlaIV | GGNNCC | 3 cut(s) | 357, 2475, 3323 |
| NmuCI | GTSAC | 4 cut(s) | 983, 1409, 2530, 3290 |
| NsbI | TGCGCA | 1 cut(s) | 2137 |
| NsiI | ATGCAT | 3 cut(s) | 265, 1497, 2642 |
| NspI | RCATGY | 4 cut(s) | 1359, 1495, 1849, 3185 |
| PaeI | GCATGC | 2 cut(s) | 1495, 1849 |
| PagI | TCATGA | 3 cut(s) | 865, 1063, 1299 |
| PciI | ACATGT | 1 cut(s) | 3181 |
| PciSI | GCTCTTC | 1 cut(s) | 2321 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 249 |
| PctI | GAATGC | 2 cut(s) | 1284, 2642 |
| PdmI | GAANNNNTTC | 3 cut(s) | 291, 2391, 2703 |
| PflFI | GACNNNGTC | 1 cut(s) | 2847 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2726 |
| PfoI | TCCNGGA | 1 cut(s) | 2086 |
| PleI | GAGTC | 7 cut(s) | 599, 1546, 1680, 2527, 2838, 2907, 3278 |
| PpsI | GAGTC | 7 cut(s) | 599, 1546, 1680, 2527, 2838, 2907, 3278 |
| PscI | ACATGT | 1 cut(s) | 3181 |
| PsiI | TTATAA | 2 cut(s) | 1715, 3414 |
| Psp124BI | GAGCTC | 1 cut(s) | 2715 |
| Psp6I | CCWGG | 5 cut(s) | 1194, 1549, 2031, 2086, 2109 |
| PspFI | CCCAGC | 1 cut(s) | 962 |
| PspGI | CCWGG | 5 cut(s) | 1194, 1549, 2031, 2086, 2109 |
| PspN4I | GGNNCC | 3 cut(s) | 357, 2475, 3323 |
| PspPI | GGNCC | 2 cut(s) | 943, 3322 |
| PsuI | RGATCY | 3 cut(s) | 355, 1981, 2105 |
| PsyI | GACNNNGTC | 1 cut(s) | 2847 |
| PvuII | CAGCTG | 1 cut(s) | 2988 |
| RsaI | GTAC | 3 cut(s) | 657, 2342, 3156 |
| RsaNI | GTAC | 3 cut(s) | 656, 2341, 3155 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1216, 1581, 3147, 3356 |
| SacI | GAGCTC | 1 cut(s) | 2715 |
| SapI | GCTCTTC | 1 cut(s) | 2321 |
| Sau96I | GGNCC | 2 cut(s) | 943, 3322 |
| ScaI | AGTACT | 1 cut(s) | 3156 |
| SchI | GAGTC | 7 cut(s) | 599, 1547, 1681, 2527, 2838, 2907, 3279 |
| ScrFI | CCNGG | 5 cut(s) | 1196, 1551, 2033, 2088, 2111 |
| SduI | GDGCHC | 4 cut(s) | 1997, 2351, 2715, 2895 |
| SfcI | CTRYAG | 1 cut(s) | 1542 |
| SinI | GGWCC | 2 cut(s) | 943, 3322 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1216, 1581, 3147, 3356 |
| SmlI | CTYRAG | 3 cut(s) | 1088, 1176, 1669 |
| SmoI | CTYRAG | 3 cut(s) | 1088, 1176, 1669 |
| SpeI | ACTAGT | 2 cut(s) | 289, 2074 |
| SphI | GCATGC | 2 cut(s) | 1495, 1849 |
| SsiI | CCGC | 8 cut(s) | 504, 549, 645, 684, 1414, 1768, 1858, 2967 |
| SspI | AATATT | 3 cut(s) | 814, 1802, 2554 |
| SspMI | CTAG | 8 cut(s) | 290, 602, 1070, 1278, 1505, 1796, 1979, 2075 |
| SstI | GAGCTC | 1 cut(s) | 2715 |
| StyD4I | CCNGG | 5 cut(s) | 1194, 1549, 2031, 2086, 2109 |
| StyI | CCWWGG | 5 cut(s) | 301, 376, 1277, 2510, 2720 |
| TaaI | ACNGT | 8 cut(s) | 1149, 1162, 1330, 1339, 1731, 1974, 2426, 3018 |
| TaiI | ACGT | 3 cut(s) | 369, 1389, 1596 |
| TaqI | TCGA | 8 cut(s) | 14, 1446, 2127, 2278, 2697, 2911, 3013, 3268 |
| TatI | WGTACW | 1 cut(s) | 3154 |
| TauI | GCSGC | 1 cut(s) | 1860 |
| TscAI | CASTG | 3 cut(s) | 1335, 1615, 2212 |
| TseFI | GTSAC | 4 cut(s) | 983, 1409, 2530, 3290 |
| TseI | GCWGC | 9 cut(s) | 458, 473, 750, 990, 1854, 2301, 2685, 3100, 3199 |
| Tsp45I | GTSAC | 4 cut(s) | 983, 1409, 2530, 3290 |
| TspRI | CASTG | 3 cut(s) | 1335, 1615, 2212 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2847 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2726 |
| VneI | GTGCAC | 2 cut(s) | 1993, 2891 |
| VpaK11BI | GGWCC | 2 cut(s) | 943, 3322 |
| XceI | RCATGY | 4 cut(s) | 1359, 1495, 1849, 3185 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 740 |
| XmaJI | CCTAGG | 1 cut(s) | 1277 |
| XmnI | GAANNNNTTC | 3 cut(s) | 291, 2391, 2703 |
| XspI | CTAG | 8 cut(s) | 290, 602, 1070, 1278, 1505, 1796, 1979, 2075 |
| ZrmI | AGTACT | 1 cut(s) | 3156 |
| Zsp2I | ATGCAT | 3 cut(s) | 265, 1497, 2642 |