TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 23 - 166 | 5.6e-51 | TIR domain |
| TIR_2 | PF13676 | 25 - 120 | 2e-15 | TIR domain |
| WHD_ROQ1 | PF23282 | 183 - 222 | 2e-07 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 422 - 505 | 7.9e-08 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 425 - 508 | 1.2e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 839 |
| AccB1I | GGYRCC | 1 cut(s) | 372 |
| AccI | GTMKAC | 1 cut(s) | 665 |
| AciI | CCGC | 2 cut(s) | 504, 538 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 5 cut(s) | 831, 868, 884, 1078, 1664 |
| AcuI | CTGAAG | 1 cut(s) | 1572 |
| AdeI | CACNNNGTG | 1 cut(s) | 73 |
| AfaI | GTAC | 2 cut(s) | 894, 1508 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 273, 925, 980, 1190, 1540 |
| AflIII | ACRYGT | 1 cut(s) | 1116 |
| AjnI | CCWGG | 2 cut(s) | 933, 1252 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 119, 151 |
| AluBI | AGCT | 7 cut(s) | 20, 461, 476, 997, 1141, 1155, 1207 |
| AluI | AGCT | 7 cut(s) | 20, 461, 476, 997, 1141, 1155, 1207 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1661 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApeKI | GCWGC | 3 cut(s) | 458, 473, 1467 |
| ApoI | RAATTY | 5 cut(s) | 831, 868, 884, 1078, 1664 |
| AseI | ATTAAT | 1 cut(s) | 1287 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 204, 291, 1557 |
| AspLEI | GCGC | 1 cut(s) | 583 |
| AsuC2I | CCSGG | 1 cut(s) | 675 |
| AsuHPI | GGTGA | 3 cut(s) | 440, 689, 1172 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BamHI | GGATCC | 3 cut(s) | 355, 983, 1193 |
| BanI | GGYRCC | 1 cut(s) | 372 |
| BanII | GRGCYC | 1 cut(s) | 675 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 771, 803 |
| BbvI | GCAGC | 3 cut(s) | 470, 485, 1479 |
| BccI | CCATC | 7 cut(s) | 367, 444, 590, 631, 754, 978, 1614 |
| BciT130I | CCWGG | 2 cut(s) | 935, 1254 |
| BciVI | GTATCC | 1 cut(s) | 91 |
| BcnI | CCSGG | 1 cut(s) | 675 |
| BfaI | CTAG | 3 cut(s) | 629, 1013, 1100 |
| BfmI | CTRYAG | 1 cut(s) | 666 |
| BfoI | RGCGCY | 1 cut(s) | 584 |
| BfuI | GTATCC | 1 cut(s) | 91 |
| BglII | AGATCT | 1 cut(s) | 1456 |
| BisI | GCNGC | 3 cut(s) | 459, 474, 1468 |
| BlsI | GCNGC | 3 cut(s) | 460, 475, 1469 |
| Bme1390I | CCNGG | 3 cut(s) | 675, 935, 1254 |
| BmiI | GGNNCC | 5 cut(s) | 357, 374, 985, 1195, 1647 |
| BmrFI | CCNGG | 3 cut(s) | 675, 935, 1254 |
| BmsI | GCATC | 5 cut(s) | 272, 706, 759, 1220, 1386 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1007, 1039 |
| BpmI | CTGGAG | 3 cut(s) | 1078, 1288, 1331 |
| BpuEI | CTTGAG | 1 cut(s) | 1378 |
| BpuMI | CCSGG | 1 cut(s) | 675 |
| BsaBI | GATNNNNATC | 1 cut(s) | 171 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 273, 925, 980, 1190, 1540 |
| Bse1I | ACTGG | 5 cut(s) | 294, 1011, 1061, 1271, 1378 |
| Bse3DI | GCAATG | 1 cut(s) | 1385 |
| Bse8I | GATNNNNATC | 1 cut(s) | 171 |
| BseBI | CCWGG | 2 cut(s) | 935, 1254 |
| BseGI | GGATG | 7 cut(s) | 263, 289, 712, 970, 1094, 1394, 1590 |
| BseJI | GATNNNNATC | 1 cut(s) | 171 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 273, 925, 980, 1190, 1540 |
| BseMI | GCAATG | 1 cut(s) | 1385 |
| BseMII | CTCAG | 2 cut(s) | 71, 785 |
| BseNI | ACTGG | 5 cut(s) | 294, 1011, 1061, 1271, 1378 |
| BseRI | GAGGAG | 2 cut(s) | 198, 522 |
| BseXI | GCAGC | 3 cut(s) | 470, 485, 1479 |
| BsgI | GTGCAG | 2 cut(s) | 731, 1285 |
| Bsh1285I | CGRYCG | 1 cut(s) | 538 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BshNI | GGYRCC | 1 cut(s) | 372 |
| BsiEI | CGRYCG | 1 cut(s) | 538 |
| BsiSI | CCGG | 1 cut(s) | 675 |
| BsiWI | CGTACG | 1 cut(s) | 1506 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 273, 925, 980, 1190, 1540 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bsp1286I | GDGCHC | 1 cut(s) | 675 |
| BspACI | CCGC | 2 cut(s) | 504, 538 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspCNI | CTCAG | 2 cut(s) | 72, 786 |
| BspLI | GGNNCC | 5 cut(s) | 357, 374, 985, 1195, 1647 |
| BspT107I | GGYRCC | 1 cut(s) | 372 |
| BsrDI | GCAATG | 1 cut(s) | 1385 |
| BsrI | ACTGG | 5 cut(s) | 294, 1011, 1061, 1271, 1378 |
| Bst2UI | CCWGG | 2 cut(s) | 935, 1254 |
| Bst4CI | ACNGT | 4 cut(s) | 110, 442, 845, 1498 |
| Bst6I | CTCTTC | 3 cut(s) | 40, 175, 1416 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 625 |
| BstC8I | GCNNGC | 1 cut(s) | 617 |
| BstDEI | CTNAG | 7 cut(s) | 80, 176, 794, 889, 941, 1151, 1683 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 978 |
| BstF5I | GGATG | 7 cut(s) | 263, 289, 712, 970, 1094, 1394, 1590 |
| BstH2I | RGCGCY | 1 cut(s) | 584 |
| BstHHI | GCGC | 1 cut(s) | 583 |
| BstMCI | CGRYCG | 1 cut(s) | 538 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 625, 679 |
| BstNI | CCWGG | 2 cut(s) | 935, 1254 |
| BstNSI | RCATGY | 2 cut(s) | 619, 1120 |
| BstSCI | CCNGG | 3 cut(s) | 673, 933, 1252 |
| BstSFI | CTRYAG | 1 cut(s) | 666 |
| BstV1I | GCAGC | 3 cut(s) | 470, 485, 1479 |
| BstX2I | RGATCY | 9 cut(s) | 355, 937, 966, 983, 1009, 1061, 1193, 1271, 1456 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 998 |
| BstYI | RGATCY | 9 cut(s) | 355, 937, 966, 983, 1009, 1061, 1193, 1271, 1456 |
| BsuI | GTATCC | 1 cut(s) | 91 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtsCI | GGATG | 7 cut(s) | 263, 289, 712, 970, 1094, 1394, 1590 |
| BtsIMutI | CAGTG | 1 cut(s) | 1659 |
| Cac8I | GCNNGC | 1 cut(s) | 617 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1661 |
| CfoI | GCGC | 1 cut(s) | 583 |
| CseI | GACGC | 1 cut(s) | 1045 |
| Csp6I | GTAC | 2 cut(s) | 893, 1507 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1524, 1559 |
| CviAII | CATG | 8 cut(s) | 410, 524, 616, 620, 757, 1117, 1348, 1583 |
| CviQI | GTAC | 2 cut(s) | 893, 1507 |
| DdeI | CTNAG | 7 cut(s) | 80, 176, 794, 889, 941, 1151, 1683 |
| DraI | TTTAAA | 1 cut(s) | 960 |
| DraIII | CACNNNGTG | 1 cut(s) | 73 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 3 cut(s) | 40, 175, 1416 |
| EarI | CTCTTC | 3 cut(s) | 40, 175, 1416 |
| EciI | GGCGGA | 1 cut(s) | 519 |
| Eco24I | GRGCYC | 1 cut(s) | 675 |
| Eco32I | GATATC | 1 cut(s) | 1406 |
| Eco57I | CTGAAG | 1 cut(s) | 1572 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 978 |
| EcoRI | GAATTC | 1 cut(s) | 1664 |
| EcoRII | CCWGG | 2 cut(s) | 933, 1252 |
| EcoRV | GATATC | 1 cut(s) | 1406 |
| EcoT22I | ATGCAT | 2 cut(s) | 265, 621 |
| EcoT38I | GRGCYC | 1 cut(s) | 675 |
| FaeI | CATG | 8 cut(s) | 413, 527, 619, 623, 760, 1120, 1351, 1586 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 447, 479 |
| FatI | CATG | 8 cut(s) | 409, 523, 615, 619, 756, 1116, 1347, 1582 |
| FblI | GTMKAC | 1 cut(s) | 665 |
| Fnu4HI | GCNGC | 3 cut(s) | 459, 474, 1468 |
| FokI | GGATG | 7 cut(s) | 250, 296, 719, 957, 1101, 1381, 1577 |
| FriOI | GRGCYC | 1 cut(s) | 675 |
| Fsp4HI | GCNGC | 3 cut(s) | 459, 474, 1468 |
| FspBI | CTAG | 3 cut(s) | 629, 1013, 1100 |
| GlaI | GCGC | 1 cut(s) | 582 |
| GluI | GCNGC | 3 cut(s) | 459, 474, 1468 |
| GsuI | CTGGAG | 3 cut(s) | 1078, 1288, 1331 |
| HaeII | RGCGCY | 1 cut(s) | 584 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HapII | CCGG | 1 cut(s) | 675 |
| HgaI | GACGC | 1 cut(s) | 1045 |
| HhaI | GCGC | 1 cut(s) | 583 |
| Hin1II | CATG | 8 cut(s) | 413, 527, 619, 623, 760, 1120, 1351, 1586 |
| Hin6I | GCGC | 1 cut(s) | 581 |
| HinP1I | GCGC | 1 cut(s) | 581 |
| HincII | GTYRAC | 3 cut(s) | 1054, 1213, 1264 |
| HindII | GTYRAC | 3 cut(s) | 1054, 1213, 1264 |
| HindIII | AAGCTT | 2 cut(s) | 995, 1205 |
| HinfI | GANTC | 8 cut(s) | 420, 662, 796, 1147, 1219, 1530, 1547, 1598 |
| HpaII | CCGG | 1 cut(s) | 675 |
| HphI | GGTGA | 3 cut(s) | 440, 689, 1172 |
| Hpy166II | GTNNAC | 7 cut(s) | 666, 1004, 1054, 1094, 1180, 1213, 1264 |
| Hpy188III | TCNNGA | 6 cut(s) | 569, 912, 1013, 1122, 1144, 1223 |
| Hpy8I | GTNNAC | 7 cut(s) | 666, 1004, 1054, 1094, 1180, 1213, 1264 |
| HpyAV | CCTTC | 6 cut(s) | 215, 746, 984, 1194, 1401, 1625 |
| HpyCH4III | ACNGT | 4 cut(s) | 110, 442, 845, 1498 |
| HpyCH4IV | ACGT | 1 cut(s) | 366 |
| HpyCH4V | TGCA | 8 cut(s) | 263, 404, 615, 619, 712, 1302, 1467, 1483 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 625, 679 |
| HpyF3I | CTNAG | 7 cut(s) | 80, 176, 794, 889, 941, 1151, 1683 |
| HpySE526I | ACGT | 1 cut(s) | 366 |
| Hsp92II | CATG | 8 cut(s) | 413, 527, 619, 623, 760, 1120, 1351, 1586 |
| HspAI | GCGC | 1 cut(s) | 581 |
| LmnI | GCTCC | 1 cut(s) | 1146 |
| Lsp1109I | GCAGC | 3 cut(s) | 470, 485, 1479 |
| LweI | GCATC | 5 cut(s) | 272, 706, 759, 1220, 1386 |
| MaeI | CTAG | 3 cut(s) | 629, 1013, 1100 |
| MaeII | ACGT | 1 cut(s) | 366 |
| MaeIII | GTNAC | 2 cut(s) | 1033, 1595 |
| MboII | GAAGA | 9 cut(s) | 15, 27, 192, 200, 324, 584, 791, 976, 1433 |
| MfeI | CAATTG | 1 cut(s) | 11 |
| MflI | RGATCY | 9 cut(s) | 355, 937, 966, 983, 1009, 1061, 1193, 1271, 1456 |
| MhlI | GDGCHC | 1 cut(s) | 675 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 4 cut(s) | 671, 805, 1556, 1592 |
| MmeI | TCCRAC | 2 cut(s) | 1171, 1586 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| Mph1103I | ATGCAT | 2 cut(s) | 265, 621 |
| MroXI | GAANNNNTTC | 3 cut(s) | 204, 291, 1557 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 9 cut(s) | 446, 828, 866, 959, 1076, 1287, 1413, 1433, 1490 |
| MslI | CAYNNNNRTG | 1 cut(s) | 705 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspI | CCGG | 1 cut(s) | 675 |
| MspR9I | CCNGG | 3 cut(s) | 675, 935, 1254 |
| MunI | CAATTG | 1 cut(s) | 11 |
| MvaI | CCWGG | 2 cut(s) | 935, 1254 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 625, 679 |
| NciI | CCSGG | 1 cut(s) | 675 |
| NlaIII | CATG | 8 cut(s) | 413, 527, 619, 623, 760, 1120, 1351, 1586 |
| NlaIV | GGNNCC | 5 cut(s) | 357, 374, 985, 1195, 1647 |
| NmuCI | GTSAC | 2 cut(s) | 1033, 1595 |
| NsiI | ATGCAT | 2 cut(s) | 265, 621 |
| NspI | RCATGY | 2 cut(s) | 619, 1120 |
| PaeI | GCATGC | 1 cut(s) | 619 |
| PciI | ACATGT | 1 cut(s) | 1116 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1502 |
| PdmI | GAANNNNTTC | 3 cut(s) | 204, 291, 1557 |
| PfeI | GAWTC | 4 cut(s) | 420, 1147, 1219, 1530 |
| Pfl23II | CGTACG | 1 cut(s) | 1506 |
| PfoI | TCCNGGA | 1 cut(s) | 933 |
| PkrI | GCNGC | 3 cut(s) | 460, 475, 1469 |
| PleI | GAGTC | 4 cut(s) | 670, 804, 1555, 1592 |
| PpsI | GAGTC | 4 cut(s) | 670, 804, 1555, 1592 |
| PscI | ACATGT | 1 cut(s) | 1116 |
| PshBI | ATTAAT | 1 cut(s) | 1287 |
| PsiI | TTATAA | 1 cut(s) | 839 |
| Psp6I | CCWGG | 2 cut(s) | 933, 1252 |
| PspGI | CCWGG | 2 cut(s) | 933, 1252 |
| PspLI | CGTACG | 1 cut(s) | 1506 |
| PspN4I | GGNNCC | 5 cut(s) | 357, 374, 985, 1195, 1647 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1661 |
| PsuI | RGATCY | 9 cut(s) | 355, 937, 966, 983, 1009, 1061, 1193, 1271, 1456 |
| RsaI | GTAC | 2 cut(s) | 894, 1508 |
| RsaNI | GTAC | 2 cut(s) | 893, 1507 |
| RseI | CAYNNNNRTG | 1 cut(s) | 705 |
| SaqAI | TTAA | 9 cut(s) | 446, 828, 866, 959, 1076, 1287, 1413, 1433, 1490 |
| SatI | GCNGC | 3 cut(s) | 459, 474, 1468 |
| SchI | GAGTC | 4 cut(s) | 671, 805, 1556, 1592 |
| ScrFI | CCNGG | 3 cut(s) | 675, 935, 1254 |
| SduI | GDGCHC | 1 cut(s) | 675 |
| SfaNI | GCATC | 5 cut(s) | 272, 706, 759, 1220, 1386 |
| SfcI | CTRYAG | 1 cut(s) | 666 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 705 |
| SmlI | CTYRAG | 1 cut(s) | 1357 |
| SmoI | CTYRAG | 1 cut(s) | 1357 |
| SphI | GCATGC | 1 cut(s) | 619 |
| SsiI | CCGC | 2 cut(s) | 504, 538 |
| SspMI | CTAG | 3 cut(s) | 629, 1013, 1100 |
| StyD4I | CCNGG | 3 cut(s) | 673, 933, 1252 |
| TaaI | ACNGT | 4 cut(s) | 110, 442, 845, 1498 |
| TaiI | ACGT | 1 cut(s) | 369 |
| TaqI | TCGA | 2 cut(s) | 977, 1607 |
| TatI | WGTACW | 1 cut(s) | 892 |
| TfiI | GAWTC | 4 cut(s) | 420, 1147, 1219, 1530 |
| Tru1I | TTAA | 9 cut(s) | 446, 828, 866, 959, 1076, 1287, 1413, 1433, 1490 |
| Tru9I | TTAA | 9 cut(s) | 446, 828, 866, 959, 1076, 1287, 1413, 1433, 1490 |
| TscAI | CASTG | 1 cut(s) | 1666 |
| TseFI | GTSAC | 2 cut(s) | 1033, 1595 |
| TseI | GCWGC | 3 cut(s) | 458, 473, 1467 |
| Tsp45I | GTSAC | 2 cut(s) | 1033, 1595 |
| TspGWI | ACGGA | 1 cut(s) | 1583 |
| TspRI | CASTG | 1 cut(s) | 1666 |
| VspI | ATTAAT | 1 cut(s) | 1287 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 978 |
| XapI | RAATTY | 5 cut(s) | 831, 868, 884, 1078, 1664 |
| XbaI | TCTAGA | 1 cut(s) | 1012 |
| XceI | RCATGY | 2 cut(s) | 619, 1120 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 277 |
| XmiI | GTMKAC | 1 cut(s) | 665 |
| XmnI | GAANNNNTTC | 3 cut(s) | 204, 291, 1557 |
| XspI | CTAG | 3 cut(s) | 629, 1013, 1100 |
| Zsp2I | ATGCAT | 2 cut(s) | 265, 621 |