TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 24 - 192 | 6.4e-51 | TIR domain |
| TIR_2 | PF13676 | 26 - 120 | 2.3e-13 | TIR domain |
| NB-ARC | PF00931 | 203 - 373 | 3.3e-20 | NB-ARC domain |
| ATPase_2 | PF01637 | 206 - 322 | 2.6e-06 | ATPase domain predominantly from Archaea |
| NACHT | PF05729 | 223 - 367 | 8.1e-06 | NACHT domain |
| WHD_ROQ1 | PF23282 | 445 - 513 | 9.7e-22 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 630 - 742 | 2.4e-08 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 659 - 743 | 2.8e-12 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 859, 2681 |
| Acc36I | ACCTGC | 2 cut(s) | 859, 2681 |
| AccII | CGCG | 1 cut(s) | 106 |
| AciI | CCGC | 4 cut(s) | 98, 133, 854, 2981 |
| AclWI | GGATC | 7 cut(s) | 12, 650, 1216, 1319, 2004, 2076, 2515 |
| AcoI | YGGCCR | 2 cut(s) | 121, 2523 |
| AcsI | RAATTY | 9 cut(s) | 520, 817, 1710, 1819, 2337, 2345, 2400, 2624, 2790 |
| AcuI | CTGAAG | 1 cut(s) | 73 |
| AfaI | GTAC | 3 cut(s) | 2169, 2315, 2634 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 23, 139, 910, 1774, 3049 |
| AflII | CTTAAG | 1 cut(s) | 2018 |
| AflIII | ACRYGT | 2 cut(s) | 2904, 2919 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 2050, 2386 |
| AjiI | CACGTC | 1 cut(s) | 2905 |
| AjnI | CCWGG | 4 cut(s) | 387, 759, 988, 1549 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 961, 993, 2622, 2654 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1780, 1812, 2499, 2531 |
| Alw21I | GWGCWC | 2 cut(s) | 888, 2653 |
| Alw26I | GTCTC | 4 cut(s) | 1921, 2037, 2072, 2142 |
| AlwI | GGATC | 7 cut(s) | 12, 650, 1216, 1319, 2004, 2076, 2515 |
| AoxI | GGCC | 6 cut(s) | 121, 491, 1233, 1859, 2122, 2523 |
| ApaI | GGGCCC | 1 cut(s) | 1863 |
| ApeKI | GCWGC | 5 cut(s) | 458, 473, 1846, 1948, 3119 |
| ApoI | RAATTY | 9 cut(s) | 520, 817, 1710, 1819, 2337, 2345, 2400, 2624, 2790 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1341, 1524, 2262 |
| AspLEI | GCGC | 1 cut(s) | 108 |
| AspS9I | GGNCC | 6 cut(s) | 492, 937, 986, 1777, 1859, 1860 |
| AsuHPI | GGTGA | 6 cut(s) | 407, 868, 1075, 1661, 1924, 2662 |
| AvaII | GGWCC | 3 cut(s) | 937, 986, 1777 |
| BaeGI | GKGCMC | 1 cut(s) | 1863 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2151, 2184 |
| BalI | TGGCCA | 2 cut(s) | 123, 2525 |
| BanII | GRGCYC | 1 cut(s) | 1863 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1114, 1146 |
| BauI | CACGAG | 3 cut(s) | 612, 2352, 2496 |
| BbsI | GAAGAC | 2 cut(s) | 627, 1512 |
| Bbv12I | GWGCWC | 2 cut(s) | 888, 2653 |
| BbvI | GCAGC | 5 cut(s) | 470, 485, 1833, 1935, 3106 |
| BccI | CCATC | 6 cut(s) | 167, 503, 2019, 2093, 2179, 2357 |
| BceAI | ACGGC | 3 cut(s) | 1050, 2598, 2661 |
| BciT130I | CCWGG | 4 cut(s) | 389, 761, 990, 1551 |
| BciVI | GTATCC | 2 cut(s) | 94, 1725 |
| BcoDI | GTCTC | 4 cut(s) | 1921, 2037, 2072, 2142 |
| BfaI | CTAG | 3 cut(s) | 1502, 1877, 2216 |
| BfmI | CTRYAG | 2 cut(s) | 1949, 2619 |
| BfrI | CTTAAG | 1 cut(s) | 2018 |
| BfuAI | ACCTGC | 2 cut(s) | 859, 2681 |
| BfuI | GTATCC | 2 cut(s) | 94, 1725 |
| BglII | AGATCT | 1 cut(s) | 1213 |
| BisI | GCNGC | 6 cut(s) | 459, 474, 1847, 1949, 2981, 3120 |
| BlsI | GCNGC | 6 cut(s) | 460, 475, 1848, 1950, 2982, 3121 |
| Bme1390I | CCNGG | 4 cut(s) | 389, 761, 990, 1551 |
| Bme18I | GGWCC | 3 cut(s) | 937, 986, 1777 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 2050, 2386 |
| BmgBI | CACGTC | 1 cut(s) | 2905 |
| BmgT120I | GGNCC | 6 cut(s) | 492, 937, 986, 1777, 1859, 1860 |
| BmiI | GGNNCC | 3 cut(s) | 28, 1778, 1861 |
| BmrFI | CCNGG | 4 cut(s) | 389, 761, 990, 1551 |
| BmsI | GCATC | 5 cut(s) | 275, 388, 1479, 1641, 2967 |
| BpiI | GAAGAC | 2 cut(s) | 627, 1512 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 33 |
| BpmI | CTGGAG | 3 cut(s) | 813, 1807, 2222 |
| Bpu10I | CCTNAGC | 1 cut(s) | 413 |
| BpuEI | CTTGAG | 3 cut(s) | 872, 1757, 2231 |
| BsaJI | CCNNGG | 5 cut(s) | 387, 1829, 1881, 1983, 3166 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 23, 139, 910, 1774, 3049 |
| Bse1I | ACTGG | 5 cut(s) | 124, 1768, 1790, 2125, 3027 |
| Bse3DI | GCAATG | 4 cut(s) | 1316, 2189, 2201, 2233 |
| BseBI | CCWGG | 4 cut(s) | 389, 761, 990, 1551 |
| BseDI | CCNNGG | 5 cut(s) | 387, 1829, 1881, 1983, 3166 |
| BseGI | GGATG | 9 cut(s) | 292, 508, 1494, 2546, 2689, 2701, 2713, 2725, 2982 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 23, 139, 910, 1774, 3049 |
| BseMI | GCAATG | 4 cut(s) | 1316, 2189, 2201, 2233 |
| BseMII | CTCAG | 6 cut(s) | 74, 1149, 1449, 1933, 2118, 3117 |
| BseNI | ACTGG | 5 cut(s) | 124, 1768, 1790, 2125, 3027 |
| BseRI | GAGGAG | 1 cut(s) | 1907 |
| BseSI | GKGCMC | 1 cut(s) | 1863 |
| BseXI | GCAGC | 5 cut(s) | 470, 485, 1833, 1935, 3106 |
| BseYI | CCCAGC | 1 cut(s) | 3057 |
| BsgI | GTGCAG | 2 cut(s) | 1832, 1849 |
| Bsh1236I | CGCG | 1 cut(s) | 106 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1808 |
| BshFI | GGCC | 6 cut(s) | 123, 493, 1235, 1861, 2124, 2525 |
| BsiEI | CGRYCG | 1 cut(s) | 1808 |
| BsiHKAI | GWGCWC | 2 cut(s) | 888, 2653 |
| BslFI | GGGAC | 2 cut(s) | 1522, 2825 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 23, 139, 910, 1774, 3049 |
| BsmAI | GTCTC | 4 cut(s) | 1921, 2037, 2072, 2142 |
| BsmFI | GGGAC | 2 cut(s) | 1522, 2825 |
| BsnI | GGCC | 6 cut(s) | 123, 493, 1235, 1861, 2124, 2525 |
| Bsp120I | GGGCCC | 1 cut(s) | 1859 |
| Bsp1286I | GDGCHC | 3 cut(s) | 888, 1863, 2653 |
| BspACI | CCGC | 4 cut(s) | 98, 133, 854, 2981 |
| BspANI | GGCC | 6 cut(s) | 123, 493, 1235, 1861, 2124, 2525 |
| BspCNI | CTCAG | 6 cut(s) | 75, 1150, 1448, 1932, 2117, 3118 |
| BspFNI | CGCG | 1 cut(s) | 106 |
| BspLI | GGNNCC | 3 cut(s) | 28, 1778, 1861 |
| BspMAI | CTGCAG | 1 cut(s) | 1953 |
| BspMI | ACCTGC | 2 cut(s) | 859, 2681 |
| BspPI | GGATC | 7 cut(s) | 12, 650, 1216, 1319, 2004, 2076, 2515 |
| BspQI | GCTCTTC | 1 cut(s) | 1103 |
| BspTI | CTTAAG | 1 cut(s) | 2018 |
| BsrDI | GCAATG | 4 cut(s) | 1316, 2189, 2201, 2233 |
| BsrI | ACTGG | 5 cut(s) | 124, 1768, 1790, 2125, 3027 |
| BssECI | CCNNGG | 5 cut(s) | 387, 1829, 1881, 1983, 3166 |
| BssSI | CACGAG | 3 cut(s) | 612, 2352, 2496 |
| BssT1I | CCWWGG | 1 cut(s) | 1983 |
| Bst2BI | CACGAG | 3 cut(s) | 612, 2352, 2496 |
| Bst2UI | CCWGG | 4 cut(s) | 389, 761, 990, 1551 |
| Bst4CI | ACNGT | 8 cut(s) | 752, 883, 1409, 1671, 2318, 2384, 2637, 2950 |
| Bst6I | CTCTTC | 7 cut(s) | 37, 43, 49, 1103, 1639, 1886, 3012 |
| BstAFI | CTTAAG | 1 cut(s) | 2018 |
| BstC8I | GCNNGC | 1 cut(s) | 409 |
| BstEII | GGTNACC | 1 cut(s) | 856 |
| BstF5I | GGATG | 9 cut(s) | 292, 508, 1494, 2546, 2689, 2701, 2713, 2725, 2982 |
| BstFNI | CGCG | 1 cut(s) | 106 |
| BstHHI | GCGC | 1 cut(s) | 108 |
| BstMAI | GTCTC | 4 cut(s) | 1921, 2037, 2072, 2142 |
| BstMCI | CGRYCG | 1 cut(s) | 1808 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 263, 3116 |
| BstNI | CCWGG | 4 cut(s) | 389, 761, 990, 1551 |
| BstNSI | RCATGY | 1 cut(s) | 1359 |
| BstPI | GGTNACC | 1 cut(s) | 856 |
| BstSCI | CCNGG | 4 cut(s) | 387, 759, 988, 1549 |
| BstSFI | CTRYAG | 2 cut(s) | 1949, 2619 |
| BstSLI | GKGCMC | 1 cut(s) | 1863 |
| BstUI | CGCG | 1 cut(s) | 106 |
| BstV1I | GCAGC | 5 cut(s) | 470, 485, 1833, 1935, 3106 |
| BstV2I | GAAGAC | 2 cut(s) | 627, 1512 |
| BstX2I | RGATCY | 4 cut(s) | 4, 1213, 1996, 2068 |
| BstYI | RGATCY | 4 cut(s) | 4, 1213, 1996, 2068 |
| BsuI | GTATCC | 2 cut(s) | 94, 1725 |
| BsuRI | GGCC | 6 cut(s) | 123, 493, 1235, 1861, 2124, 2525 |
| BtrI | CACGTC | 1 cut(s) | 2905 |
| BtsCI | GGATG | 9 cut(s) | 292, 508, 1494, 2546, 2689, 2701, 2713, 2725, 2982 |
| BtsIMutI | CAGTG | 5 cut(s) | 117, 879, 2118, 3034, 3123 |
| BveI | ACCTGC | 2 cut(s) | 859, 2681 |
| Cac8I | GCNNGC | 1 cut(s) | 409 |
| CfoI | GCGC | 1 cut(s) | 108 |
| Cfr13I | GGNCC | 6 cut(s) | 492, 937, 986, 1777, 1859, 1860 |
| CseI | GACGC | 1 cut(s) | 351 |
| Csp6I | GTAC | 3 cut(s) | 2168, 2314, 2633 |
| CviQI | GTAC | 3 cut(s) | 2168, 2314, 2633 |
| DraI | TTTAAA | 2 cut(s) | 579, 1366 |
| DriI | GACNNNNNGTC | 2 cut(s) | 2050, 2386 |
| EaeI | YGGCCR | 2 cut(s) | 121, 2523 |
| Eam1104I | CTCTTC | 7 cut(s) | 37, 43, 49, 1103, 1639, 1886, 3012 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 2050, 2386 |
| EarI | CTCTTC | 7 cut(s) | 37, 43, 49, 1103, 1639, 1886, 3012 |
| Eco130I | CCWWGG | 1 cut(s) | 1983 |
| Eco24I | GRGCYC | 1 cut(s) | 1863 |
| Eco32I | GATATC | 2 cut(s) | 549, 1271 |
| Eco47I | GGWCC | 3 cut(s) | 937, 986, 1777 |
| Eco57I | CTGAAG | 1 cut(s) | 73 |
| Eco91I | GGTNACC | 1 cut(s) | 856 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1777, 1859, 1860 |
| EcoO65I | GGTNACC | 1 cut(s) | 856 |
| EcoRI | GAATTC | 1 cut(s) | 2624 |
| EcoRII | CCWGG | 4 cut(s) | 387, 759, 988, 1549 |
| EcoRV | GATATC | 2 cut(s) | 549, 1271 |
| EcoT14I | CCWWGG | 1 cut(s) | 1983 |
| EcoT22I | ATGCAT | 4 cut(s) | 268, 1252, 1494, 2191 |
| EcoT38I | GRGCYC | 1 cut(s) | 1863 |
| ErhI | CCWWGG | 1 cut(s) | 1983 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 266, 298, 416, 448, 612, 644, 1329, 1361 |
| FaqI | GGGAC | 2 cut(s) | 1522, 2825 |
| Fnu4HI | GCNGC | 6 cut(s) | 459, 474, 1847, 1949, 2981, 3120 |
| FokI | GGATG | 9 cut(s) | 299, 515, 1501, 2533, 2696, 2708, 2720, 2732, 2989 |
| FriOI | GRGCYC | 1 cut(s) | 1863 |
| Fsp4HI | GCNGC | 6 cut(s) | 459, 474, 1847, 1949, 2981, 3120 |
| FspBI | CTAG | 3 cut(s) | 1502, 1877, 2216 |
| GlaI | GCGC | 1 cut(s) | 107 |
| GluI | GCNGC | 6 cut(s) | 459, 474, 1847, 1949, 2981, 3120 |
| GsaI | CCCAGC | 1 cut(s) | 3061 |
| GsuI | CTGGAG | 3 cut(s) | 813, 1807, 2222 |
| HaeIII | GGCC | 6 cut(s) | 123, 493, 1235, 1861, 2124, 2525 |
| HgaI | GACGC | 1 cut(s) | 351 |
| HhaI | GCGC | 1 cut(s) | 108 |
| Hin6I | GCGC | 1 cut(s) | 106 |
| HinP1I | GCGC | 1 cut(s) | 106 |
| HincII | GTYRAC | 2 cut(s) | 2415, 2592 |
| HindII | GTYRAC | 2 cut(s) | 2415, 2592 |
| HindIII | AAGCTT | 3 cut(s) | 1086, 1684, 2327 |
| HphI | GGTGA | 6 cut(s) | 407, 868, 1075, 1661, 1924, 2662 |
| Hpy99I | CGWCG | 2 cut(s) | 245, 367 |
| HpyCH4III | ACNGT | 8 cut(s) | 752, 883, 1409, 1671, 2318, 2384, 2637, 2950 |
| HpyCH4IV | ACGT | 4 cut(s) | 1168, 1424, 2904, 2919 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 263, 3116 |
| HpySE526I | ACGT | 4 cut(s) | 1168, 1424, 2904, 2919 |
| HspAI | GCGC | 1 cut(s) | 106 |
| LguI | GCTCTTC | 1 cut(s) | 1103 |
| LmnI | GCTCC | 3 cut(s) | 26, 1902, 2656 |
| Lsp1109I | GCAGC | 5 cut(s) | 470, 485, 1833, 1935, 3106 |
| LweI | GCATC | 5 cut(s) | 275, 388, 1479, 1641, 2967 |
| MaeI | CTAG | 3 cut(s) | 1502, 1877, 2216 |
| MaeII | ACGT | 4 cut(s) | 1168, 1424, 2904, 2919 |
| MfeI | CAATTG | 2 cut(s) | 402, 2806 |
| MflI | RGATCY | 4 cut(s) | 4, 1213, 1996, 2068 |
| MhlI | GDGCHC | 3 cut(s) | 888, 1863, 2653 |
| MlsI | TGGCCA | 2 cut(s) | 123, 2525 |
| MluNI | TGGCCA | 2 cut(s) | 123, 2525 |
| MlyI | GAGTC | 5 cut(s) | 1544, 1864, 1923, 2587, 3072 |
| MmeI | TCCRAC | 7 cut(s) | 345, 431, 580, 1709, 2089, 2270, 2436 |
| Mox20I | TGGCCA | 2 cut(s) | 123, 2525 |
| Mph1103I | ATGCAT | 4 cut(s) | 268, 1252, 1494, 2191 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1341, 1524, 2262 |
| MscI | TGGCCA | 2 cut(s) | 123, 2525 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1487, 2194 |
| Msp20I | TGGCCA | 2 cut(s) | 123, 2525 |
| MspCI | CTTAAG | 1 cut(s) | 2018 |
| MspR9I | CCNGG | 4 cut(s) | 389, 761, 990, 1551 |
| MunI | CAATTG | 2 cut(s) | 402, 2806 |
| MvaI | CCWGG | 4 cut(s) | 389, 761, 990, 1551 |
| MvnI | CGCG | 1 cut(s) | 106 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 263, 3116 |
| NlaIV | GGNNCC | 3 cut(s) | 28, 1778, 1861 |
| NmeAIII | GCCGAG | 2 cut(s) | 1261, 1906 |
| NmuCI | GTSAC | 3 cut(s) | 856, 1409, 1649 |
| NsiI | ATGCAT | 4 cut(s) | 268, 1252, 1494, 2191 |
| NspI | RCATGY | 1 cut(s) | 1359 |
| PaqCI | CACCTGC | 2 cut(s) | 859, 2681 |
| PciSI | GCTCTTC | 1 cut(s) | 1103 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1814 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1341, 1524, 2262 |
| PfoI | TCCNGGA | 1 cut(s) | 988 |
| PkrI | GCNGC | 6 cut(s) | 460, 475, 1848, 1950, 2982, 3121 |
| Ple19I | CGATCG | 1 cut(s) | 1808 |
| PleI | GAGTC | 5 cut(s) | 1543, 1864, 1923, 2587, 3071 |
| PpsI | GAGTC | 5 cut(s) | 1543, 1864, 1923, 2587, 3071 |
| PpuMI | RGGWCCY | 1 cut(s) | 1777 |
| Psp5II | RGGWCCY | 1 cut(s) | 1777 |
| Psp6I | CCWGG | 4 cut(s) | 387, 759, 988, 1549 |
| PspEI | GGTNACC | 1 cut(s) | 856 |
| PspFI | CCCAGC | 1 cut(s) | 3057 |
| PspGI | CCWGG | 4 cut(s) | 387, 759, 988, 1549 |
| PspN4I | GGNNCC | 3 cut(s) | 28, 1778, 1861 |
| PspOMI | GGGCCC | 1 cut(s) | 1859 |
| PspPI | GGNCC | 6 cut(s) | 492, 937, 986, 1777, 1859, 1860 |
| PspPPI | RGGWCCY | 1 cut(s) | 1777 |
| PstI | CTGCAG | 1 cut(s) | 1953 |
| PsuI | RGATCY | 4 cut(s) | 4, 1213, 1996, 2068 |
| PvuI | CGATCG | 1 cut(s) | 1808 |
| RsaI | GTAC | 3 cut(s) | 2169, 2315, 2634 |
| RsaNI | GTAC | 3 cut(s) | 2168, 2314, 2633 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1487, 2194 |
| SapI | GCTCTTC | 1 cut(s) | 1103 |
| SatI | GCNGC | 6 cut(s) | 459, 474, 1847, 1949, 2981, 3120 |
| Sau96I | GGNCC | 6 cut(s) | 492, 937, 986, 1777, 1859, 1860 |
| SchI | GAGTC | 5 cut(s) | 1544, 1864, 1923, 2587, 3072 |
| ScrFI | CCNGG | 4 cut(s) | 389, 761, 990, 1551 |
| SduI | GDGCHC | 3 cut(s) | 888, 1863, 2653 |
| SfaNI | GCATC | 5 cut(s) | 275, 388, 1479, 1641, 2967 |
| SfcI | CTRYAG | 2 cut(s) | 1949, 2619 |
| SinI | GGWCC | 3 cut(s) | 937, 986, 1777 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1487, 2194 |
| SmlI | CTYRAG | 4 cut(s) | 887, 1736, 2018, 2210 |
| SmoI | CTYRAG | 4 cut(s) | 887, 1736, 2018, 2210 |
| SsiI | CCGC | 4 cut(s) | 98, 133, 854, 2981 |
| SspMI | CTAG | 3 cut(s) | 1502, 1877, 2216 |
| StyD4I | CCNGG | 4 cut(s) | 387, 759, 988, 1549 |
| StyI | CCWWGG | 1 cut(s) | 1983 |
| TaaI | ACNGT | 8 cut(s) | 752, 883, 1409, 1671, 2318, 2384, 2637, 2950 |
| TaiI | ACGT | 4 cut(s) | 1171, 1427, 2907, 2922 |
| TaqI | TCGA | 5 cut(s) | 213, 1722, 2174, 2998, 3075 |
| TatI | WGTACW | 1 cut(s) | 2632 |
| TauI | GCSGC | 1 cut(s) | 2983 |
| TscAI | CASTG | 5 cut(s) | 124, 886, 2125, 3034, 3130 |
| TseFI | GTSAC | 3 cut(s) | 856, 1409, 1649 |
| TseI | GCWGC | 5 cut(s) | 458, 473, 1846, 1948, 3119 |
| Tsp45I | GTSAC | 3 cut(s) | 856, 1409, 1649 |
| TspGWI | ACGGA | 5 cut(s) | 229, 1176, 1631, 1695, 2539 |
| TspRI | CASTG | 5 cut(s) | 124, 886, 2125, 3034, 3130 |
| Vha464I | CTTAAG | 1 cut(s) | 2018 |
| VpaK11BI | GGWCC | 3 cut(s) | 937, 986, 1777 |
| XapI | RAATTY | 9 cut(s) | 520, 817, 1710, 1819, 2337, 2345, 2400, 2624, 2790 |
| XbaI | TCTAGA | 1 cut(s) | 1501 |
| XceI | RCATGY | 1 cut(s) | 1359 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1341, 1524, 2262 |
| XspI | CTAG | 3 cut(s) | 1502, 1877, 2216 |
| Zsp2I | ATGCAT | 4 cut(s) | 268, 1252, 1494, 2191 |