TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 887 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 826 |
| AatII | GACGTC | 1 cut(s) | 93 |
| AccII | CGCG | 1 cut(s) | 121 |
| AciI | CCGC | 2 cut(s) | 20, 567 |
| AclI | AACGTT | 1 cut(s) | 1024 |
| AclWI | GGATC | 2 cut(s) | 368, 381 |
| AcoI | YGGCCR | 1 cut(s) | 1028 |
| AcsI | RAATTY | 3 cut(s) | 493, 536, 999 |
| AcuI | CTGAAG | 1 cut(s) | 163 |
| AcyI | GRCGYC | 1 cut(s) | 90 |
| AfaI | GTAC | 3 cut(s) | 146, 387, 634 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 291 |
| AflIII | ACRYGT | 1 cut(s) | 382 |
| AgsI | TTSAA | 5 cut(s) | 60, 255, 437, 747, 764 |
| AluBI | AGCT | 5 cut(s) | 193, 223, 476, 533, 734 |
| AluI | AGCT | 5 cut(s) | 193, 223, 476, 533, 734 |
| Alw26I | GTCTC | 2 cut(s) | 167, 812 |
| AlwI | GGATC | 2 cut(s) | 368, 381 |
| Ama87I | CYCGRG | 1 cut(s) | 570 |
| AoxI | GGCC | 1 cut(s) | 1028 |
| ApeKI | GCWGC | 1 cut(s) | 488 |
| ApoI | RAATTY | 3 cut(s) | 493, 536, 999 |
| AseI | ATTAAT | 1 cut(s) | 15 |
| AspLEI | GCGC | 1 cut(s) | 123 |
| AsuHPI | GGTGA | 2 cut(s) | 59, 868 |
| AvaI | CYCGRG | 1 cut(s) | 570 |
| BalI | TGGCCA | 1 cut(s) | 1030 |
| BamHI | GGATCC | 1 cut(s) | 373 |
| BbsI | GAAGAC | 4 cut(s) | 85, 213, 256, 525 |
| BbvI | GCAGC | 1 cut(s) | 500 |
| BccI | CCATC | 1 cut(s) | 498 |
| BciVI | GTATCC | 1 cut(s) | 109 |
| BclI | TGATCA | 2 cut(s) | 64, 868 |
| BcoDI | GTCTC | 2 cut(s) | 167, 812 |
| BfaI | CTAG | 1 cut(s) | 803 |
| BfuI | GTATCC | 1 cut(s) | 109 |
| BisI | GCNGC | 1 cut(s) | 489 |
| BlsI | GCNGC | 1 cut(s) | 490 |
| BmeT110I | CYCGRG | 1 cut(s) | 570 |
| BmiI | GGNNCC | 1 cut(s) | 375 |
| BmsI | GCATC | 2 cut(s) | 475, 888 |
| BpiI | GAAGAC | 4 cut(s) | 85, 213, 256, 525 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 460, 492 |
| BpuEI | CTTGAG | 2 cut(s) | 271, 449 |
| BsaHI | GRCGYC | 1 cut(s) | 90 |
| BsaI | GGTCTC | 1 cut(s) | 167 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 291 |
| Bse1I | ACTGG | 4 cut(s) | 27, 356, 523, 706 |
| Bse3DI | GCAATG | 1 cut(s) | 868 |
| BseGI | GGATG | 6 cut(s) | 35, 307, 509, 604, 610, 903 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 291 |
| BseMI | GCAATG | 1 cut(s) | 868 |
| BseNI | ACTGG | 4 cut(s) | 27, 356, 523, 706 |
| BseRI | GAGGAG | 2 cut(s) | 216, 254 |
| BseXI | GCAGC | 1 cut(s) | 500 |
| BseYI | CCCAGC | 1 cut(s) | 988 |
| BsgI | GTGCAG | 1 cut(s) | 346 |
| Bsh1236I | CGCG | 1 cut(s) | 121 |
| BshFI | GGCC | 1 cut(s) | 1030 |
| BsiHKCI | CYCGRG | 1 cut(s) | 570 |
| BslFI | GGGAC | 1 cut(s) | 572 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 291 |
| BsmAI | GTCTC | 2 cut(s) | 167, 812 |
| BsmFI | GGGAC | 1 cut(s) | 572 |
| BsnI | GGCC | 1 cut(s) | 1030 |
| Bso31I | GGTCTC | 1 cut(s) | 167 |
| BsoBI | CYCGRG | 1 cut(s) | 570 |
| Bsp1407I | TGTACA | 2 cut(s) | 144, 632 |
| Bsp143I | GATC | 6 cut(s) | 64, 136, 315, 373, 791, 868 |
| BspACI | CCGC | 2 cut(s) | 20, 567 |
| BspANI | GGCC | 1 cut(s) | 1030 |
| BspFNI | CGCG | 1 cut(s) | 121 |
| BspLI | GGNNCC | 1 cut(s) | 375 |
| BspPI | GGATC | 2 cut(s) | 368, 381 |
| BspTNI | GGTCTC | 1 cut(s) | 167 |
| BsrDI | GCAATG | 1 cut(s) | 868 |
| BsrGI | TGTACA | 2 cut(s) | 144, 632 |
| BsrI | ACTGG | 4 cut(s) | 27, 356, 523, 706 |
| BssMI | GATC | 6 cut(s) | 64, 136, 315, 373, 791, 868 |
| BssNI | GRCGYC | 1 cut(s) | 90 |
| Bst4CI | ACNGT | 1 cut(s) | 784 |
| Bst6I | CTCTTC | 2 cut(s) | 46, 589 |
| BstACI | GRCGYC | 1 cut(s) | 90 |
| BstAUI | TGTACA | 2 cut(s) | 144, 632 |
| BstDEI | CTNAG | 1 cut(s) | 98 |
| BstF5I | GGATG | 6 cut(s) | 35, 307, 509, 604, 610, 903 |
| BstFNI | CGCG | 1 cut(s) | 121 |
| BstHHI | GCGC | 1 cut(s) | 123 |
| BstKTI | GATC | 6 cut(s) | 67, 139, 318, 376, 794, 871 |
| BstMAI | GTCTC | 2 cut(s) | 167, 812 |
| BstMBI | GATC | 6 cut(s) | 64, 136, 315, 373, 791, 868 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 687 |
| BstNSI | RCATGY | 1 cut(s) | 386 |
| BstUI | CGCG | 1 cut(s) | 121 |
| BstV1I | GCAGC | 1 cut(s) | 500 |
| BstV2I | GAAGAC | 4 cut(s) | 85, 213, 256, 525 |
| BstX2I | RGATCY | 1 cut(s) | 373 |
| BstYI | RGATCY | 1 cut(s) | 373 |
| BsuI | GTATCC | 1 cut(s) | 109 |
| BsuRI | GGCC | 1 cut(s) | 1030 |
| BtsCI | GGATG | 6 cut(s) | 35, 307, 509, 604, 610, 903 |
| BtsIMutI | CAGTG | 1 cut(s) | 167 |
| CfoI | GCGC | 1 cut(s) | 123 |
| CseI | GACGC | 1 cut(s) | 422 |
| Csp6I | GTAC | 3 cut(s) | 145, 386, 633 |
| CviAII | CATG | 4 cut(s) | 383, 424, 682, 1032 |
| CviQI | GTAC | 3 cut(s) | 145, 386, 633 |
| DdeI | CTNAG | 1 cut(s) | 98 |
| DpnI | GATC | 6 cut(s) | 66, 138, 317, 375, 793, 870 |
| DpnII | GATC | 6 cut(s) | 64, 136, 315, 373, 791, 868 |
| DraI | TTTAAA | 2 cut(s) | 657, 840 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 826 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 826 |
| EaeI | YGGCCR | 1 cut(s) | 1028 |
| Eam1104I | CTCTTC | 2 cut(s) | 46, 589 |
| EarI | CTCTTC | 2 cut(s) | 46, 589 |
| EciI | GGCGGA | 1 cut(s) | 556 |
| Eco31I | GGTCTC | 1 cut(s) | 167 |
| Eco57I | CTGAAG | 1 cut(s) | 163 |
| Eco88I | CYCGRG | 1 cut(s) | 570 |
| EcoRI | GAATTC | 1 cut(s) | 999 |
| FaeI | CATG | 4 cut(s) | 386, 427, 685, 1035 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 807, 839 |
| FaqI | GGGAC | 1 cut(s) | 572 |
| FatI | CATG | 4 cut(s) | 382, 423, 681, 1031 |
| FauNDI | CATATG | 2 cut(s) | 589, 692 |
| FbaI | TGATCA | 2 cut(s) | 64, 868 |
| Fnu4HI | GCNGC | 1 cut(s) | 489 |
| FokI | GGATG | 6 cut(s) | 22, 314, 516, 597, 611, 910 |
| Fsp4HI | GCNGC | 1 cut(s) | 489 |
| FspBI | CTAG | 1 cut(s) | 803 |
| GlaI | GCGC | 1 cut(s) | 122 |
| GluI | GCNGC | 1 cut(s) | 489 |
| GsaI | CCCAGC | 1 cut(s) | 992 |
| HaeIII | GGCC | 1 cut(s) | 1030 |
| HgaI | GACGC | 1 cut(s) | 422 |
| HhaI | GCGC | 1 cut(s) | 123 |
| Hin1I | GRCGYC | 1 cut(s) | 90 |
| Hin1II | CATG | 4 cut(s) | 386, 427, 685, 1035 |
| Hin6I | GCGC | 1 cut(s) | 121 |
| HinP1I | GCGC | 1 cut(s) | 121 |
| HinfI | GANTC | 4 cut(s) | 242, 433, 626, 876 |
| HphI | GGTGA | 2 cut(s) | 59, 868 |
| Hpy166II | GTNNAC | 2 cut(s) | 580, 635 |
| Hpy188I | TCNGA | 5 cut(s) | 12, 182, 484, 529, 832 |
| Hpy188III | TCNNGA | 5 cut(s) | 246, 313, 501, 544, 778 |
| Hpy8I | GTNNAC | 2 cut(s) | 580, 635 |
| Hpy99I | CGWCG | 1 cut(s) | 92 |
| HpyAV | CCTTC | 1 cut(s) | 187 |
| HpyCH4III | ACNGT | 1 cut(s) | 784 |
| HpyCH4IV | ACGT | 3 cut(s) | 52, 90, 1024 |
| HpyCH4V | TGCA | 4 cut(s) | 233, 327, 488, 814 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 687 |
| HpyF3I | CTNAG | 1 cut(s) | 98 |
| HpySE526I | ACGT | 3 cut(s) | 52, 90, 1024 |
| Hsp92I | GRCGYC | 1 cut(s) | 90 |
| Hsp92II | CATG | 4 cut(s) | 386, 427, 685, 1035 |
| HspAI | GCGC | 1 cut(s) | 121 |
| Ksp22I | TGATCA | 2 cut(s) | 64, 868 |
| Kzo9I | GATC | 6 cut(s) | 64, 136, 315, 373, 791, 868 |
| Lsp1109I | GCAGC | 1 cut(s) | 500 |
| LweI | GCATC | 2 cut(s) | 475, 888 |
| MaeI | CTAG | 1 cut(s) | 803 |
| MaeII | ACGT | 3 cut(s) | 52, 90, 1024 |
| MalI | GATC | 6 cut(s) | 66, 138, 317, 375, 793, 870 |
| MboI | GATC | 6 cut(s) | 64, 136, 315, 373, 791, 868 |
| MboII | GAAGA | 8 cut(s) | 24, 33, 48, 85, 218, 256, 530, 576 |
| MfeI | CAATTG | 3 cut(s) | 234, 615, 723 |
| MflI | RGATCY | 1 cut(s) | 373 |
| MlsI | TGGCCA | 1 cut(s) | 1030 |
| MluNI | TGGCCA | 1 cut(s) | 1030 |
| MlyI | GAGTC | 3 cut(s) | 251, 635, 885 |
| Mox20I | TGGCCA | 1 cut(s) | 1030 |
| MscI | TGGCCA | 1 cut(s) | 1030 |
| MseI | TTAA | 5 cut(s) | 15, 656, 741, 839, 920 |
| Msp20I | TGGCCA | 1 cut(s) | 1030 |
| MunI | CAATTG | 3 cut(s) | 234, 615, 723 |
| MvnI | CGCG | 1 cut(s) | 121 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 687 |
| NdeI | CATATG | 2 cut(s) | 589, 692 |
| NdeII | GATC | 6 cut(s) | 64, 136, 315, 373, 791, 868 |
| NlaIII | CATG | 4 cut(s) | 386, 427, 685, 1035 |
| NlaIV | GGNNCC | 1 cut(s) | 375 |
| NspI | RCATGY | 1 cut(s) | 386 |
| PciI | ACATGT | 1 cut(s) | 382 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 315 |
| PfeI | GAWTC | 1 cut(s) | 433 |
| PkrI | GCNGC | 1 cut(s) | 490 |
| PleI | GAGTC | 3 cut(s) | 250, 634, 884 |
| PpsI | GAGTC | 3 cut(s) | 250, 634, 884 |
| PscI | ACATGT | 1 cut(s) | 382 |
| PshBI | ATTAAT | 1 cut(s) | 15 |
| PsiI | TTATAA | 1 cut(s) | 887 |
| Psp1406I | AACGTT | 1 cut(s) | 1024 |
| PspFI | CCCAGC | 1 cut(s) | 988 |
| PspN4I | GGNNCC | 1 cut(s) | 375 |
| PsuI | RGATCY | 1 cut(s) | 373 |
| RsaI | GTAC | 3 cut(s) | 146, 387, 634 |
| RsaNI | GTAC | 3 cut(s) | 145, 386, 633 |
| SaqAI | TTAA | 5 cut(s) | 15, 656, 741, 839, 920 |
| SatI | GCNGC | 1 cut(s) | 489 |
| Sau3AI | GATC | 6 cut(s) | 64, 136, 315, 373, 791, 868 |
| SchI | GAGTC | 3 cut(s) | 251, 635, 885 |
| SfaNI | GCATC | 2 cut(s) | 475, 888 |
| SmlI | CTYRAG | 2 cut(s) | 286, 428 |
| SmoI | CTYRAG | 2 cut(s) | 286, 428 |
| SsiI | CCGC | 2 cut(s) | 20, 567 |
| SspI | AATATT | 1 cut(s) | 673 |
| SspMI | CTAG | 1 cut(s) | 803 |
| TaaI | ACNGT | 1 cut(s) | 784 |
| TaiI | ACGT | 3 cut(s) | 55, 93, 1027 |
| TaqI | TCGA | 2 cut(s) | 106, 663 |
| TatI | WGTACW | 2 cut(s) | 144, 632 |
| TfiI | GAWTC | 1 cut(s) | 433 |
| Tru1I | TTAA | 5 cut(s) | 15, 656, 741, 839, 920 |
| Tru9I | TTAA | 5 cut(s) | 15, 656, 741, 839, 920 |
| TscAI | CASTG | 1 cut(s) | 167 |
| TseI | GCWGC | 1 cut(s) | 488 |
| TspDTI | ATGAA | 3 cut(s) | 24, 318, 576 |
| TspRI | CASTG | 1 cut(s) | 167 |
| VspI | ATTAAT | 1 cut(s) | 15 |
| XapI | RAATTY | 3 cut(s) | 493, 536, 999 |
| XceI | RCATGY | 1 cut(s) | 386 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 551 |
| XspI | CTAG | 1 cut(s) | 803 |
| ZraI | GACGTC | 1 cut(s) | 91 |