TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 509 |
| AccI | GTMKAC | 1 cut(s) | 1547 |
| AciI | CCGC | 4 cut(s) | 558, 654, 693, 1423 |
| AclWI | GGATC | 4 cut(s) | 158, 232, 356, 369 |
| AcsI | RAATTY | 3 cut(s) | 527, 1135, 1491 |
| AcuI | CTGAAG | 1 cut(s) | 1090 |
| AdeI | CACNNNGTG | 1 cut(s) | 73 |
| AfaI | GTAC | 3 cut(s) | 391, 666, 1482 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 273 |
| AhlI | ACTAGT | 1 cut(s) | 289 |
| Alw21I | GWGCWC | 1 cut(s) | 1104 |
| Alw26I | GTCTC | 1 cut(s) | 901 |
| AlwI | GGATC | 4 cut(s) | 158, 232, 356, 369 |
| Ama87I | CYCGRG | 3 cut(s) | 505, 618, 1433 |
| AoxI | GGCC | 1 cut(s) | 341 |
| ApeKI | GCWGC | 4 cut(s) | 464, 479, 759, 999 |
| ApoI | RAATTY | 3 cut(s) | 527, 1135, 1491 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 204, 291 |
| AspA2I | CCTAGG | 1 cut(s) | 1286 |
| AspLEI | GCGC | 1 cut(s) | 423 |
| AspS9I | GGNCC | 1 cut(s) | 952 |
| AsuC2I | CCSGG | 2 cut(s) | 514, 1557 |
| AsuHPI | GGTGA | 2 cut(s) | 410, 1571 |
| AvaI | CYCGRG | 3 cut(s) | 505, 618, 1433 |
| AvaII | GGWCC | 1 cut(s) | 952 |
| AvrII | CCTAGG | 1 cut(s) | 1286 |
| BaeGI | GKGCMC | 1 cut(s) | 512 |
| BamHI | GGATCC | 1 cut(s) | 361 |
| BanI | GGYRCC | 1 cut(s) | 509 |
| BanII | GRGCYC | 1 cut(s) | 1104 |
| BbsI | GAAGAC | 2 cut(s) | 238, 710 |
| Bbv12I | GWGCWC | 1 cut(s) | 1104 |
| BbvI | GCAGC | 4 cut(s) | 476, 491, 746, 1011 |
| BccI | CCATC | 3 cut(s) | 746, 1259, 1513 |
| BceAI | ACGGC | 1 cut(s) | 1012 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 242, 276 |
| BciVI | GTATCC | 1 cut(s) | 91 |
| BclI | TGATCA | 1 cut(s) | 169 |
| BcnI | CCSGG | 2 cut(s) | 514, 1557 |
| BcoDI | GTCTC | 1 cut(s) | 901 |
| BcuI | ACTAGT | 1 cut(s) | 289 |
| BfaI | CTAG | 5 cut(s) | 290, 611, 834, 1079, 1287 |
| BfuI | GTATCC | 1 cut(s) | 91 |
| BisI | GCNGC | 4 cut(s) | 465, 480, 760, 1000 |
| BlnI | CCTAGG | 1 cut(s) | 1286 |
| BlsI | GCNGC | 4 cut(s) | 466, 481, 761, 1001 |
| Bme1390I | CCNGG | 2 cut(s) | 514, 1557 |
| Bme18I | GGWCC | 1 cut(s) | 952 |
| BmeT110I | CYCGRG | 3 cut(s) | 505, 618, 1433 |
| BmgT120I | GGNCC | 1 cut(s) | 952 |
| BmiI | GGNNCC | 2 cut(s) | 363, 511 |
| BmrFI | CCNGG | 2 cut(s) | 514, 1557 |
| BmsI | GCATC | 2 cut(s) | 272, 1588 |
| BpiI | GAAGAC | 2 cut(s) | 238, 710 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 451, 483 |
| BpuEI | CTTGAG | 1 cut(s) | 1170 |
| BpuMI | CCSGG | 2 cut(s) | 514, 1557 |
| BsaJI | CCNNGG | 1 cut(s) | 1286 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 792, 822 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 273 |
| Bse1I | ACTGG | 1 cut(s) | 955 |
| Bse3DI | GCAATG | 1 cut(s) | 1359 |
| BseDI | CCNNGG | 1 cut(s) | 1286 |
| BseGI | GGATG | 4 cut(s) | 6, 263, 289, 1594 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 273 |
| BseMI | GCAATG | 1 cut(s) | 1359 |
| BseMII | CTCAG | 2 cut(s) | 71, 381 |
| BseNI | ACTGG | 1 cut(s) | 955 |
| BseRI | GAGGAG | 1 cut(s) | 198 |
| BseSI | GKGCMC | 1 cut(s) | 512 |
| BseXI | GCAGC | 4 cut(s) | 476, 491, 746, 1011 |
| BseYI | CCCAGC | 1 cut(s) | 971 |
| BsgI | GTGCAG | 1 cut(s) | 1613 |
| BshFI | GGCC | 1 cut(s) | 343 |
| BshNI | GGYRCC | 1 cut(s) | 509 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1104 |
| BsiHKCI | CYCGRG | 3 cut(s) | 505, 618, 1433 |
| BsiSI | CCGG | 2 cut(s) | 513, 1557 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 273 |
| BsmAI | GTCTC | 1 cut(s) | 901 |
| BsmI | GAATGC | 2 cut(s) | 1118, 1191 |
| BsnI | GGCC | 1 cut(s) | 343 |
| BsoBI | CYCGRG | 3 cut(s) | 505, 618, 1433 |
| Bsp1286I | GDGCHC | 2 cut(s) | 512, 1104 |
| Bsp143I | GATC | 5 cut(s) | 150, 169, 224, 314, 361 |
| BspACI | CCGC | 4 cut(s) | 558, 654, 693, 1423 |
| BspANI | GGCC | 1 cut(s) | 343 |
| BspCNI | CTCAG | 2 cut(s) | 72, 380 |
| BspHI | TCATGA | 3 cut(s) | 874, 1072, 1096 |
| BspLI | GGNNCC | 2 cut(s) | 363, 511 |
| BspPI | GGATC | 4 cut(s) | 158, 232, 356, 369 |
| BspQI | GCTCTTC | 1 cut(s) | 1109 |
| BspT107I | GGYRCC | 1 cut(s) | 509 |
| BsrDI | GCAATG | 1 cut(s) | 1359 |
| BsrI | ACTGG | 1 cut(s) | 955 |
| BssECI | CCNNGG | 1 cut(s) | 1286 |
| BssMI | GATC | 5 cut(s) | 150, 169, 224, 314, 361 |
| BssT1I | CCWWGG | 1 cut(s) | 1286 |
| Bst4CI | ACNGT | 5 cut(s) | 110, 1158, 1171, 1339, 1575 |
| Bst6I | CTCTTC | 4 cut(s) | 40, 543, 1109, 1509 |
| BstC8I | GCNNGC | 2 cut(s) | 1254, 1499 |
| BstDEI | CTNAG | 2 cut(s) | 80, 367 |
| BstF5I | GGATG | 4 cut(s) | 6, 263, 289, 1594 |
| BstHHI | GCGC | 1 cut(s) | 423 |
| BstKTI | GATC | 5 cut(s) | 153, 172, 227, 317, 364 |
| BstMAI | GTCTC | 1 cut(s) | 901 |
| BstMBI | GATC | 5 cut(s) | 150, 169, 224, 314, 361 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1561 |
| BstNSI | RCATGY | 1 cut(s) | 1501 |
| BstSCI | CCNGG | 2 cut(s) | 512, 1555 |
| BstSLI | GKGCMC | 1 cut(s) | 512 |
| BstV1I | GCAGC | 4 cut(s) | 476, 491, 746, 1011 |
| BstV2I | GAAGAC | 2 cut(s) | 238, 710 |
| BstX2I | RGATCY | 1 cut(s) | 361 |
| BstYI | RGATCY | 1 cut(s) | 361 |
| BsuI | GTATCC | 1 cut(s) | 91 |
| BsuRI | GGCC | 1 cut(s) | 343 |
| BtsCI | GGATG | 4 cut(s) | 6, 263, 289, 1594 |
| BtsIMutI | CAGTG | 2 cut(s) | 1202, 1344 |
| Cac8I | GCNNGC | 2 cut(s) | 1254, 1499 |
| CciI | TCATGA | 3 cut(s) | 874, 1072, 1096 |
| CfoI | GCGC | 1 cut(s) | 423 |
| Cfr13I | GGNCC | 1 cut(s) | 952 |
| Csp6I | GTAC | 3 cut(s) | 390, 665, 1481 |
| CviAII | CATG | 8 cut(s) | 416, 670, 797, 875, 1073, 1097, 1498, 1502 |
| CviQI | GTAC | 3 cut(s) | 390, 665, 1481 |
| DdeI | CTNAG | 2 cut(s) | 80, 367 |
| DpnI | GATC | 5 cut(s) | 152, 171, 226, 316, 363 |
| DpnII | GATC | 5 cut(s) | 150, 169, 224, 314, 361 |
| DraI | TTTAAA | 1 cut(s) | 1273 |
| DraIII | CACNNNGTG | 1 cut(s) | 73 |
| Eam1104I | CTCTTC | 4 cut(s) | 40, 543, 1109, 1509 |
| EarI | CTCTTC | 4 cut(s) | 40, 543, 1109, 1509 |
| EciI | GGCGGA | 2 cut(s) | 669, 708 |
| Ecl136II | GAGCTC | 1 cut(s) | 1102 |
| Eco130I | CCWWGG | 1 cut(s) | 1286 |
| Eco24I | GRGCYC | 1 cut(s) | 1104 |
| Eco47I | GGWCC | 1 cut(s) | 952 |
| Eco53kI | GAGCTC | 1 cut(s) | 1102 |
| Eco57I | CTGAAG | 1 cut(s) | 1090 |
| Eco88I | CYCGRG | 3 cut(s) | 505, 618, 1433 |
| EcoICRI | GAGCTC | 1 cut(s) | 1102 |
| EcoT14I | CCWWGG | 1 cut(s) | 1286 |
| EcoT22I | ATGCAT | 3 cut(s) | 265, 1120, 1503 |
| EcoT38I | GRGCYC | 1 cut(s) | 1104 |
| ErhI | CCWWGG | 1 cut(s) | 1286 |
| FaeI | CATG | 8 cut(s) | 419, 673, 800, 878, 1076, 1100, 1501, 1505 |
| FatI | CATG | 8 cut(s) | 415, 669, 796, 874, 1072, 1096, 1497, 1501 |
| FbaI | TGATCA | 1 cut(s) | 169 |
| FblI | GTMKAC | 1 cut(s) | 1547 |
| Fnu4HI | GCNGC | 4 cut(s) | 465, 480, 760, 1000 |
| FokI | GGATG | 3 cut(s) | 250, 296, 1601 |
| FriOI | GRGCYC | 1 cut(s) | 1104 |
| Fsp4HI | GCNGC | 4 cut(s) | 465, 480, 760, 1000 |
| FspBI | CTAG | 5 cut(s) | 290, 611, 834, 1079, 1287 |
| GlaI | GCGC | 1 cut(s) | 422 |
| GluI | GCNGC | 4 cut(s) | 465, 480, 760, 1000 |
| GsaI | CCCAGC | 1 cut(s) | 975 |
| HaeIII | GGCC | 1 cut(s) | 343 |
| HapII | CCGG | 2 cut(s) | 513, 1557 |
| HhaI | GCGC | 1 cut(s) | 423 |
| Hin1II | CATG | 8 cut(s) | 419, 673, 800, 878, 1076, 1100, 1501, 1505 |
| Hin6I | GCGC | 1 cut(s) | 421 |
| HinP1I | GCGC | 1 cut(s) | 421 |
| HincII | GTYRAC | 2 cut(s) | 811, 934 |
| HindII | GTYRAC | 2 cut(s) | 811, 934 |
| HinfI | GANTC | 7 cut(s) | 426, 614, 854, 882, 919, 1279, 1544 |
| HpaII | CCGG | 2 cut(s) | 513, 1557 |
| HphI | GGTGA | 2 cut(s) | 410, 1571 |
| Hpy166II | GTNNAC | 4 cut(s) | 727, 811, 934, 1548 |
| Hpy188I | TCNGA | 7 cut(s) | 81, 199, 212, 253, 370, 475, 790 |
| Hpy188III | TCNNGA | 5 cut(s) | 875, 1073, 1097, 1298, 1454 |
| Hpy8I | GTNNAC | 4 cut(s) | 727, 811, 934, 1548 |
| HpyAV | CCTTC | 5 cut(s) | 169, 215, 776, 872, 1406 |
| HpyCH4III | ACNGT | 5 cut(s) | 110, 1158, 1171, 1339, 1575 |
| HpyCH4IV | ACGT | 2 cut(s) | 372, 1599 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1561 |
| HpyF3I | CTNAG | 2 cut(s) | 80, 367 |
| HpySE526I | ACGT | 2 cut(s) | 372, 1599 |
| Hsp92II | CATG | 8 cut(s) | 419, 673, 800, 878, 1076, 1100, 1501, 1505 |
| HspAI | GCGC | 1 cut(s) | 421 |
| Ksp22I | TGATCA | 1 cut(s) | 169 |
| Kzo9I | GATC | 5 cut(s) | 150, 169, 224, 314, 361 |
| LguI | GCTCTTC | 1 cut(s) | 1109 |
| LpnPI | CCDG | 9 cut(s) | 73, 102, 115, 477, 526, 957, 968, 1570, 1580 |
| Lsp1109I | GCAGC | 4 cut(s) | 476, 491, 746, 1011 |
| LweI | GCATC | 2 cut(s) | 272, 1588 |
| MaeI | CTAG | 5 cut(s) | 290, 611, 834, 1079, 1287 |
| MaeII | ACGT | 2 cut(s) | 372, 1599 |
| MaeIII | GTNAC | 3 cut(s) | 992, 1082, 1162 |
| MalI | GATC | 5 cut(s) | 152, 171, 226, 316, 363 |
| MboI | GATC | 5 cut(s) | 150, 169, 224, 314, 361 |
| MfeI | CAATTG | 4 cut(s) | 11, 405, 711, 735 |
| MflI | RGATCY | 1 cut(s) | 361 |
| MhlI | GDGCHC | 2 cut(s) | 512, 1104 |
| MlyI | GAGTC | 2 cut(s) | 608, 1553 |
| MmeI | TCCRAC | 2 cut(s) | 1361, 1491 |
| Mph1103I | ATGCAT | 3 cut(s) | 265, 1120, 1503 |
| MroXI | GAANNNNTTC | 2 cut(s) | 204, 291 |
| MseI | TTAA | 5 cut(s) | 452, 926, 1272, 1428, 1446 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1225, 1587 |
| MspI | CCGG | 2 cut(s) | 513, 1557 |
| MspR9I | CCNGG | 2 cut(s) | 514, 1557 |
| MunI | CAATTG | 4 cut(s) | 11, 405, 711, 735 |
| Mva1269I | GAATGC | 2 cut(s) | 1118, 1191 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1561 |
| NciI | CCSGG | 2 cut(s) | 514, 1557 |
| NdeII | GATC | 5 cut(s) | 150, 169, 224, 314, 361 |
| NlaIII | CATG | 8 cut(s) | 419, 673, 800, 878, 1076, 1100, 1501, 1505 |
| NlaIV | GGNNCC | 2 cut(s) | 363, 511 |
| NmuCI | GTSAC | 2 cut(s) | 992, 1082 |
| NsiI | ATGCAT | 3 cut(s) | 265, 1120, 1503 |
| NspI | RCATGY | 1 cut(s) | 1501 |
| PaeI | GCATGC | 1 cut(s) | 1501 |
| PagI | TCATGA | 3 cut(s) | 874, 1072, 1096 |
| PciSI | GCTCTTC | 1 cut(s) | 1109 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 249 |
| PctI | GAATGC | 2 cut(s) | 1118, 1191 |
| PdmI | GAANNNNTTC | 2 cut(s) | 204, 291 |
| PfeI | GAWTC | 5 cut(s) | 426, 854, 882, 919, 1279 |
| PkrI | GCNGC | 4 cut(s) | 466, 481, 761, 1001 |
| PleI | GAGTC | 2 cut(s) | 608, 1552 |
| PpsI | GAGTC | 2 cut(s) | 608, 1552 |
| Psp124BI | GAGCTC | 1 cut(s) | 1104 |
| PspFI | CCCAGC | 1 cut(s) | 971 |
| PspN4I | GGNNCC | 2 cut(s) | 363, 511 |
| PspPI | GGNCC | 1 cut(s) | 952 |
| PsuI | RGATCY | 1 cut(s) | 361 |
| RsaI | GTAC | 3 cut(s) | 391, 666, 1482 |
| RsaNI | GTAC | 3 cut(s) | 390, 665, 1481 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1225, 1587 |
| SacI | GAGCTC | 1 cut(s) | 1104 |
| SapI | GCTCTTC | 1 cut(s) | 1109 |
| SaqAI | TTAA | 5 cut(s) | 452, 926, 1272, 1428, 1446 |
| SatI | GCNGC | 4 cut(s) | 465, 480, 760, 1000 |
| Sau3AI | GATC | 5 cut(s) | 150, 169, 224, 314, 361 |
| Sau96I | GGNCC | 1 cut(s) | 952 |
| SchI | GAGTC | 2 cut(s) | 608, 1553 |
| ScrFI | CCNGG | 2 cut(s) | 514, 1557 |
| SduI | GDGCHC | 2 cut(s) | 512, 1104 |
| SfaNI | GCATC | 2 cut(s) | 272, 1588 |
| SinI | GGWCC | 1 cut(s) | 952 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1225, 1587 |
| SmlI | CTYRAG | 1 cut(s) | 1185 |
| SmoI | CTYRAG | 1 cut(s) | 1185 |
| SpeI | ACTAGT | 1 cut(s) | 289 |
| SphI | GCATGC | 1 cut(s) | 1501 |
| SsiI | CCGC | 4 cut(s) | 558, 654, 693, 1423 |
| SspI | AATATT | 1 cut(s) | 823 |
| SspMI | CTAG | 5 cut(s) | 290, 611, 834, 1079, 1287 |
| SstI | GAGCTC | 1 cut(s) | 1104 |
| StyD4I | CCNGG | 2 cut(s) | 512, 1555 |
| StyI | CCWWGG | 1 cut(s) | 1286 |
| TaaI | ACNGT | 5 cut(s) | 110, 1158, 1171, 1339, 1575 |
| TaiI | ACGT | 2 cut(s) | 375, 1602 |
| TaqI | TCGA | 1 cut(s) | 1356 |
| TfiI | GAWTC | 5 cut(s) | 426, 854, 882, 919, 1279 |
| Tru1I | TTAA | 5 cut(s) | 452, 926, 1272, 1428, 1446 |
| Tru9I | TTAA | 5 cut(s) | 452, 926, 1272, 1428, 1446 |
| TscAI | CASTG | 2 cut(s) | 1209, 1344 |
| TseFI | GTSAC | 2 cut(s) | 992, 1082 |
| TseI | GCWGC | 4 cut(s) | 464, 479, 759, 999 |
| Tsp45I | GTSAC | 2 cut(s) | 992, 1082 |
| TspRI | CASTG | 2 cut(s) | 1209, 1344 |
| VpaK11BI | GGWCC | 1 cut(s) | 952 |
| XapI | RAATTY | 3 cut(s) | 527, 1135, 1491 |
| XceI | RCATGY | 1 cut(s) | 1501 |
| XmaJI | CCTAGG | 1 cut(s) | 1286 |
| XmiI | GTMKAC | 1 cut(s) | 1547 |
| XmnI | GAANNNNTTC | 2 cut(s) | 204, 291 |
| XspI | CTAG | 5 cut(s) | 290, 611, 834, 1079, 1287 |
| Zsp2I | ATGCAT | 3 cut(s) | 265, 1120, 1503 |