TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 24 - 187 | 4.2e-55 | TIR domain |
| TIR_2 | PF13676 | 26 - 122 | 1.2e-14 | TIR domain |
| NB-ARC | PF00931 | 200 - 368 | 1.9e-18 | NB-ARC domain |
| ATPase_2 | PF01637 | 201 - 312 | 3.5e-06 | ATPase domain predominantly from Archaea |
| WHD_ROQ1 | PF23282 | 439 - 507 | 8.6e-20 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 642 - 728 | 5.9e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 709 - 794 | 8.2e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 732 - 789 | 7.7e-06 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 1543 |
| AccII | CGCG | 2 cut(s) | 106, 108 |
| AccIII | TCCGGA | 1 cut(s) | 1111 |
| AciI | CCGC | 4 cut(s) | 675, 1659, 2162, 2555 |
| AclWI | GGATC | 7 cut(s) | 12, 235, 353, 549, 942, 2154, 2361 |
| AcoI | YGGCCR | 3 cut(s) | 2050, 2457, 2499 |
| AcsI | RAATTY | 9 cut(s) | 466, 1012, 1275, 1633, 1689, 1837, 1965, 2447, 2489 |
| AcuI | CTGAAG | 3 cut(s) | 73, 801, 896 |
| AfaI | GTAC | 1 cut(s) | 1380 |
| AfeI | AGCGCT | 1 cut(s) | 2660 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 23, 898, 1529, 1792, 2048, 2429 |
| AflIII | ACRYGT | 1 cut(s) | 568 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2197 |
| AjnI | CCWGG | 4 cut(s) | 210, 387, 747, 1395 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 936, 968 |
| AleI | CACNNNNGTG | 1 cut(s) | 1806 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1798, 1830 |
| Alw21I | GWGCWC | 2 cut(s) | 210, 400 |
| Alw26I | GTCTC | 4 cut(s) | 1524, 2060, 2071, 2184 |
| AlwI | GGATC | 7 cut(s) | 12, 235, 353, 549, 942, 2154, 2361 |
| Ama87I | CYCGRG | 1 cut(s) | 1403 |
| Aor13HI | TCCGGA | 1 cut(s) | 1111 |
| Aor51HI | AGCGCT | 1 cut(s) | 2660 |
| AoxI | GGCC | 9 cut(s) | 121, 385, 1434, 1877, 2050, 2269, 2457, 2499, 2633 |
| ApaI | GGGCCC | 1 cut(s) | 1881 |
| ApeKI | GCWGC | 4 cut(s) | 446, 461, 1229, 1828 |
| ApoI | RAATTY | 9 cut(s) | 466, 1012, 1275, 1633, 1689, 1837, 1965, 2447, 2489 |
| AseI | ATTAAT | 1 cut(s) | 1715 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 1323, 1683, 2409, 2448, 2490 |
| AspA2I | CCTAGG | 1 cut(s) | 2636 |
| AspLEI | GCGC | 3 cut(s) | 108, 1947, 2661 |
| AspS9I | GGNCC | 7 cut(s) | 385, 1573, 1795, 1877, 1878, 2005, 2432 |
| AsuHPI | GGTGA | 5 cut(s) | 107, 392, 1629, 2128, 2659 |
| AvaI | CYCGRG | 1 cut(s) | 1403 |
| AvaII | GGWCC | 4 cut(s) | 1573, 1795, 2005, 2432 |
| AvrII | CCTAGG | 1 cut(s) | 2636 |
| BaeGI | GKGCMC | 1 cut(s) | 1881 |
| BalI | TGGCCA | 2 cut(s) | 2459, 2501 |
| BanII | GRGCYC | 2 cut(s) | 210, 1881 |
| BauI | CACGAG | 1 cut(s) | 600 |
| Bbv12I | GWGCWC | 2 cut(s) | 210, 400 |
| BbvI | GCAGC | 4 cut(s) | 458, 473, 1216, 1815 |
| BceAI | ACGGC | 3 cut(s) | 1672, 1902, 2037 |
| BciT130I | CCWGG | 4 cut(s) | 212, 389, 749, 1397 |
| BciVI | GTATCC | 1 cut(s) | 94 |
| BclI | TGATCA | 2 cut(s) | 1306, 2118 |
| BcoDI | GTCTC | 4 cut(s) | 1524, 2060, 2071, 2184 |
| BfaI | CTAG | 2 cut(s) | 2363, 2637 |
| BfmI | CTRYAG | 2 cut(s) | 2296, 2734 |
| BfoI | RGCGCY | 2 cut(s) | 1948, 2662 |
| BfuI | GTATCC | 1 cut(s) | 94 |
| BglII | AGATCT | 1 cut(s) | 300 |
| BisI | GCNGC | 4 cut(s) | 447, 462, 1230, 1829 |
| BlnI | CCTAGG | 1 cut(s) | 2636 |
| BlsI | GCNGC | 4 cut(s) | 448, 463, 1231, 1830 |
| Bme1390I | CCNGG | 4 cut(s) | 212, 389, 749, 1397 |
| Bme18I | GGWCC | 4 cut(s) | 1573, 1795, 2005, 2432 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2197 |
| BmeT110I | CYCGRG | 1 cut(s) | 1403 |
| BmgT120I | GGNCC | 7 cut(s) | 385, 1573, 1795, 1877, 1878, 2005, 2432 |
| BmiI | GGNNCC | 4 cut(s) | 28, 1401, 1796, 1879 |
| BmrFI | CCNGG | 4 cut(s) | 212, 389, 749, 1397 |
| BmsI | GCATC | 4 cut(s) | 275, 1054, 1461, 1740 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 33 |
| BpmI | CTGGAG | 3 cut(s) | 1825, 2084, 2369 |
| Bpu10I | CCTNAGC | 1 cut(s) | 404 |
| BpuEI | CTTGAG | 2 cut(s) | 1598, 2186 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2358, 2717 |
| BsaJI | CCNNGG | 3 cut(s) | 1702, 1847, 2636 |
| BsaWI | WCCGGW | 2 cut(s) | 1111, 2513 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1752, 1782, 1798, 1828 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 23, 898, 1529, 1792, 2048, 2429 |
| Bse1I | ACTGG | 4 cut(s) | 1786, 1808, 2272, 2629 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2358, 2717 |
| BseAI | TCCGGA | 1 cut(s) | 1111 |
| BseBI | CCWGG | 4 cut(s) | 212, 389, 749, 1397 |
| BseDI | CCNNGG | 3 cut(s) | 1702, 1847, 2636 |
| BseGI | GGATG | 7 cut(s) | 292, 496, 580, 1120, 1222, 1309, 1476 |
| BseJI | GATNNNNATC | 2 cut(s) | 2358, 2717 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 23, 898, 1529, 1792, 2048, 2429 |
| BseMII | CTCAG | 4 cut(s) | 74, 1515, 2265, 2736 |
| BseNI | ACTGG | 4 cut(s) | 1786, 1808, 2272, 2629 |
| BseRI | GAGGAG | 2 cut(s) | 201, 2406 |
| BseSI | GKGCMC | 1 cut(s) | 1881 |
| BseXI | GCAGC | 4 cut(s) | 458, 473, 1216, 1815 |
| BseYI | CCCAGC | 1 cut(s) | 2655 |
| BsgI | GTGCAG | 1 cut(s) | 1867 |
| Bsh1236I | CGCG | 2 cut(s) | 106, 108 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1826 |
| BshFI | GGCC | 9 cut(s) | 123, 387, 1436, 1879, 2052, 2271, 2459, 2501, 2635 |
| BsiEI | CGRYCG | 1 cut(s) | 1826 |
| BsiHKAI | GWGCWC | 2 cut(s) | 210, 400 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1403 |
| BsiSI | CCGG | 2 cut(s) | 1112, 2514 |
| BslFI | GGGAC | 1 cut(s) | 2638 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 23, 898, 1529, 1792, 2048, 2429 |
| BsmAI | GTCTC | 4 cut(s) | 1524, 2060, 2071, 2184 |
| BsmBI | CGTCTC | 1 cut(s) | 2060 |
| BsmFI | GGGAC | 1 cut(s) | 2638 |
| BsmI | GAATGC | 1 cut(s) | 2162 |
| BsnI | GGCC | 9 cut(s) | 123, 387, 1436, 1879, 2052, 2271, 2459, 2501, 2635 |
| BsoBI | CYCGRG | 1 cut(s) | 1403 |
| Bsp120I | GGGCCC | 1 cut(s) | 1877 |
| Bsp1286I | GDGCHC | 3 cut(s) | 210, 400, 1881 |
| Bsp13I | TCCGGA | 1 cut(s) | 1111 |
| Bsp19I | CCATGG | 1 cut(s) | 1702 |
| BspACI | CCGC | 4 cut(s) | 675, 1659, 2162, 2555 |
| BspANI | GGCC | 9 cut(s) | 123, 387, 1436, 1879, 2052, 2271, 2459, 2501, 2635 |
| BspCNI | CTCAG | 4 cut(s) | 75, 1516, 2264, 2735 |
| BspEI | TCCGGA | 1 cut(s) | 1111 |
| BspFNI | CGCG | 2 cut(s) | 106, 108 |
| BspHI | TCATGA | 2 cut(s) | 1057, 1555 |
| BspLI | GGNNCC | 4 cut(s) | 28, 1401, 1796, 1879 |
| BspPI | GGATC | 7 cut(s) | 12, 235, 353, 549, 942, 2154, 2361 |
| BspQI | GCTCTTC | 2 cut(s) | 1082, 1896 |
| BsrI | ACTGG | 4 cut(s) | 1786, 1808, 2272, 2629 |
| BssECI | CCNNGG | 3 cut(s) | 1702, 1847, 2636 |
| BssSI | CACGAG | 1 cut(s) | 600 |
| BssT1I | CCWWGG | 2 cut(s) | 1702, 2636 |
| Bst2BI | CACGAG | 1 cut(s) | 600 |
| Bst2UI | CCWGG | 4 cut(s) | 212, 389, 749, 1397 |
| Bst4CI | ACNGT | 4 cut(s) | 1548, 1650, 2018, 2297 |
| Bst6I | CTCTTC | 9 cut(s) | 37, 43, 49, 1082, 1896, 2523, 2589, 2595, 2604 |
| BstC8I | GCNNGC | 2 cut(s) | 1862, 2162 |
| BstDSI | CCRYGG | 1 cut(s) | 1702 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1527 |
| BstF5I | GGATG | 7 cut(s) | 292, 496, 580, 1120, 1222, 1309, 1476 |
| BstFNI | CGCG | 2 cut(s) | 106, 108 |
| BstH2I | RGCGCY | 2 cut(s) | 1948, 2662 |
| BstHHI | GCGC | 3 cut(s) | 108, 1947, 2661 |
| BstMAI | GTCTC | 4 cut(s) | 1524, 2060, 2071, 2184 |
| BstMCI | CGRYCG | 1 cut(s) | 1826 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 263 |
| BstNI | CCWGG | 4 cut(s) | 212, 389, 749, 1397 |
| BstNSI | RCATGY | 4 cut(s) | 572, 1341, 1864, 1992 |
| BstSCI | CCNGG | 4 cut(s) | 210, 387, 747, 1395 |
| BstSFI | CTRYAG | 2 cut(s) | 2296, 2734 |
| BstSLI | GKGCMC | 1 cut(s) | 1881 |
| BstUI | CGCG | 2 cut(s) | 106, 108 |
| BstV1I | GCAGC | 4 cut(s) | 458, 473, 1216, 1815 |
| BstX2I | RGATCY | 6 cut(s) | 4, 300, 358, 554, 2146, 2353 |
| BstYI | RGATCY | 6 cut(s) | 4, 300, 358, 554, 2146, 2353 |
| BsuI | GTATCC | 1 cut(s) | 94 |
| BsuRI | GGCC | 9 cut(s) | 123, 387, 1436, 1879, 2052, 2271, 2459, 2501, 2635 |
| BtgI | CCRYGG | 1 cut(s) | 1702 |
| BtsCI | GGATG | 7 cut(s) | 292, 496, 580, 1120, 1222, 1309, 1476 |
| BtsIMutI | CAGTG | 4 cut(s) | 1801, 2265, 2293, 2636 |
| Cac8I | GCNNGC | 2 cut(s) | 1862, 2162 |
| CciI | TCATGA | 2 cut(s) | 1057, 1555 |
| CfoI | GCGC | 3 cut(s) | 108, 1947, 2661 |
| Cfr13I | GGNCC | 7 cut(s) | 385, 1573, 1795, 1877, 1878, 2005, 2432 |
| CseI | GACGC | 1 cut(s) | 1929 |
| Csp6I | GTAC | 1 cut(s) | 1379 |
| CviQI | GTAC | 1 cut(s) | 1379 |
| DraI | TTTAAA | 2 cut(s) | 1348, 2619 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2197 |
| EaeI | YGGCCR | 3 cut(s) | 2050, 2457, 2499 |
| Eam1104I | CTCTTC | 9 cut(s) | 37, 43, 49, 1082, 1896, 2523, 2589, 2595, 2604 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2197 |
| EarI | CTCTTC | 9 cut(s) | 37, 43, 49, 1082, 1896, 2523, 2589, 2595, 2604 |
| EciI | GGCGGA | 3 cut(s) | 690, 1674, 2570 |
| Ecl136II | GAGCTC | 1 cut(s) | 208 |
| Eco130I | CCWWGG | 2 cut(s) | 1702, 2636 |
| Eco147I | AGGCCT | 1 cut(s) | 1436 |
| Eco24I | GRGCYC | 2 cut(s) | 210, 1881 |
| Eco32I | GATATC | 1 cut(s) | 537 |
| Eco47I | GGWCC | 4 cut(s) | 1573, 1795, 2005, 2432 |
| Eco47III | AGCGCT | 1 cut(s) | 2660 |
| Eco53kI | GAGCTC | 1 cut(s) | 208 |
| Eco57I | CTGAAG | 3 cut(s) | 73, 801, 896 |
| Eco88I | CYCGRG | 1 cut(s) | 1403 |
| EcoICRI | GAGCTC | 1 cut(s) | 208 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1527 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1573, 1795, 1878 |
| EcoRI | GAATTC | 2 cut(s) | 1633, 1965 |
| EcoRII | CCWGG | 4 cut(s) | 210, 387, 747, 1395 |
| EcoRV | GATATC | 1 cut(s) | 537 |
| EcoT14I | CCWWGG | 2 cut(s) | 1702, 2636 |
| EcoT22I | ATGCAT | 2 cut(s) | 268, 1476 |
| EcoT38I | GRGCYC | 2 cut(s) | 210, 1881 |
| ErhI | CCWWGG | 2 cut(s) | 1702, 2636 |
| Esp3I | CGTCTC | 1 cut(s) | 2060 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 266, 298, 1311, 1343 |
| FaqI | GGGAC | 1 cut(s) | 2638 |
| FauI | CCCGC | 1 cut(s) | 2169 |
| FauNDI | CATATG | 1 cut(s) | 1036 |
| FbaI | TGATCA | 2 cut(s) | 1306, 2118 |
| FblI | GTMKAC | 1 cut(s) | 1543 |
| Fnu4HI | GCNGC | 4 cut(s) | 447, 462, 1230, 1829 |
| FokI | GGATG | 7 cut(s) | 299, 503, 567, 1127, 1229, 1316, 1483 |
| FriOI | GRGCYC | 2 cut(s) | 210, 1881 |
| Fsp4HI | GCNGC | 4 cut(s) | 447, 462, 1230, 1829 |
| FspBI | CTAG | 2 cut(s) | 2363, 2637 |
| GlaI | GCGC | 3 cut(s) | 107, 1946, 2660 |
| GluI | GCNGC | 4 cut(s) | 447, 462, 1230, 1829 |
| GsaI | CCCAGC | 1 cut(s) | 2659 |
| GsuI | CTGGAG | 3 cut(s) | 1825, 2084, 2369 |
| HaeII | RGCGCY | 2 cut(s) | 1948, 2662 |
| HaeIII | GGCC | 9 cut(s) | 123, 387, 1436, 1879, 2052, 2271, 2459, 2501, 2635 |
| HapII | CCGG | 2 cut(s) | 1112, 2514 |
| HgaI | GACGC | 1 cut(s) | 1929 |
| HhaI | GCGC | 3 cut(s) | 108, 1947, 2661 |
| Hin6I | GCGC | 3 cut(s) | 106, 1945, 2659 |
| HinP1I | GCGC | 3 cut(s) | 106, 1945, 2659 |
| HincII | GTYRAC | 2 cut(s) | 690, 2038 |
| HindII | GTYRAC | 2 cut(s) | 690, 2038 |
| HindIII | AAGCTT | 1 cut(s) | 1663 |
| HpaII | CCGG | 2 cut(s) | 1112, 2514 |
| HphI | GGTGA | 5 cut(s) | 107, 392, 1629, 2128, 2659 |
| Hpy166II | GTNNAC | 6 cut(s) | 337, 690, 709, 925, 1544, 2038 |
| Hpy8I | GTNNAC | 6 cut(s) | 337, 690, 709, 925, 1544, 2038 |
| Hpy99I | CGWCG | 2 cut(s) | 367, 1923 |
| HpyCH4III | ACNGT | 4 cut(s) | 1548, 1650, 2018, 2297 |
| HpyCH4IV | ACGT | 2 cut(s) | 1537, 2344 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 263 |
| HpySE526I | ACGT | 2 cut(s) | 1537, 2344 |
| HspAI | GCGC | 3 cut(s) | 106, 1945, 2659 |
| Kpn2I | TCCGGA | 1 cut(s) | 1111 |
| Ksp22I | TGATCA | 2 cut(s) | 1306, 2118 |
| LguI | GCTCTTC | 2 cut(s) | 1082, 1896 |
| LmnI | GCTCC | 5 cut(s) | 26, 205, 213, 1999, 2103 |
| Lsp1109I | GCAGC | 4 cut(s) | 458, 473, 1216, 1815 |
| LweI | GCATC | 4 cut(s) | 275, 1054, 1461, 1740 |
| MaeI | CTAG | 2 cut(s) | 2363, 2637 |
| MaeII | ACGT | 2 cut(s) | 1537, 2344 |
| MaeIII | GTNAC | 5 cut(s) | 844, 1289, 1391, 2241, 2383 |
| MfeI | CAATTG | 3 cut(s) | 1081, 1459, 1503 |
| MflI | RGATCY | 6 cut(s) | 4, 300, 358, 554, 2146, 2353 |
| MhlI | GDGCHC | 3 cut(s) | 210, 400, 1881 |
| MlsI | TGGCCA | 2 cut(s) | 2459, 2501 |
| MluNI | TGGCCA | 2 cut(s) | 2459, 2501 |
| MlyI | GAGTC | 3 cut(s) | 1526, 2073, 2660 |
| MmeI | TCCRAC | 6 cut(s) | 345, 419, 568, 934, 1656, 2417 |
| Mox20I | TGGCCA | 2 cut(s) | 2459, 2501 |
| Mph1103I | ATGCAT | 2 cut(s) | 268, 1476 |
| MroI | TCCGGA | 1 cut(s) | 1111 |
| MroXI | GAANNNNTTC | 5 cut(s) | 1323, 1683, 2409, 2448, 2490 |
| MscI | TGGCCA | 2 cut(s) | 2459, 2501 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1062, 1707, 1806 |
| Msp20I | TGGCCA | 2 cut(s) | 2459, 2501 |
| MspI | CCGG | 2 cut(s) | 1112, 2514 |
| MspR9I | CCNGG | 4 cut(s) | 212, 389, 749, 1397 |
| MunI | CAATTG | 3 cut(s) | 1081, 1459, 1503 |
| Mva1269I | GAATGC | 1 cut(s) | 2162 |
| MvaI | CCWGG | 4 cut(s) | 212, 389, 749, 1397 |
| MvnI | CGCG | 2 cut(s) | 106, 108 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 263 |
| NcoI | CCATGG | 1 cut(s) | 1702 |
| NdeI | CATATG | 1 cut(s) | 1036 |
| NlaIV | GGNNCC | 4 cut(s) | 28, 1401, 1796, 1879 |
| NmuCI | GTSAC | 2 cut(s) | 844, 1391 |
| NsiI | ATGCAT | 2 cut(s) | 268, 1476 |
| NspI | RCATGY | 4 cut(s) | 572, 1341, 1864, 1992 |
| OliI | CACNNNNGTG | 1 cut(s) | 1806 |
| PaeI | GCATGC | 1 cut(s) | 1864 |
| PagI | TCATGA | 2 cut(s) | 1057, 1555 |
| PceI | AGGCCT | 1 cut(s) | 1436 |
| PciI | ACATGT | 1 cut(s) | 568 |
| PciSI | GCTCTTC | 2 cut(s) | 1082, 1896 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 1566, 1832, 2064 |
| PctI | GAATGC | 1 cut(s) | 2162 |
| PdmI | GAANNNNTTC | 5 cut(s) | 1323, 1683, 2409, 2448, 2490 |
| PfoI | TCCNGGA | 1 cut(s) | 210 |
| PkrI | GCNGC | 4 cut(s) | 448, 463, 1231, 1830 |
| Ple19I | CGATCG | 1 cut(s) | 1826 |
| PleI | GAGTC | 3 cut(s) | 1525, 2073, 2659 |
| PpsI | GAGTC | 3 cut(s) | 1525, 2073, 2659 |
| PpuMI | RGGWCCY | 2 cut(s) | 1573, 1795 |
| PscI | ACATGT | 1 cut(s) | 568 |
| PshBI | ATTAAT | 1 cut(s) | 1715 |
| Psp124BI | GAGCTC | 1 cut(s) | 210 |
| Psp5II | RGGWCCY | 2 cut(s) | 1573, 1795 |
| Psp6I | CCWGG | 4 cut(s) | 210, 387, 747, 1395 |
| PspFI | CCCAGC | 1 cut(s) | 2655 |
| PspGI | CCWGG | 4 cut(s) | 210, 387, 747, 1395 |
| PspN4I | GGNNCC | 4 cut(s) | 28, 1401, 1796, 1879 |
| PspOMI | GGGCCC | 1 cut(s) | 1877 |
| PspPI | GGNCC | 7 cut(s) | 385, 1573, 1795, 1877, 1878, 2005, 2432 |
| PspPPI | RGGWCCY | 2 cut(s) | 1573, 1795 |
| PsuI | RGATCY | 6 cut(s) | 4, 300, 358, 554, 2146, 2353 |
| PvuI | CGATCG | 1 cut(s) | 1826 |
| RsaI | GTAC | 1 cut(s) | 1380 |
| RsaNI | GTAC | 1 cut(s) | 1379 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1062, 1707, 1806 |
| SacI | GAGCTC | 1 cut(s) | 210 |
| SapI | GCTCTTC | 2 cut(s) | 1082, 1896 |
| SatI | GCNGC | 4 cut(s) | 447, 462, 1230, 1829 |
| Sau96I | GGNCC | 7 cut(s) | 385, 1573, 1795, 1877, 1878, 2005, 2432 |
| SchI | GAGTC | 3 cut(s) | 1526, 2073, 2660 |
| ScrFI | CCNGG | 4 cut(s) | 212, 389, 749, 1397 |
| SduI | GDGCHC | 3 cut(s) | 210, 400, 1881 |
| SfaNI | GCATC | 4 cut(s) | 275, 1054, 1461, 1740 |
| SfcI | CTRYAG | 2 cut(s) | 2296, 2734 |
| SinI | GGWCC | 4 cut(s) | 1573, 1795, 2005, 2432 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1062, 1707, 1806 |
| SmlI | CTYRAG | 2 cut(s) | 1577, 2165 |
| SmoI | CTYRAG | 2 cut(s) | 1577, 2165 |
| SphI | GCATGC | 1 cut(s) | 1864 |
| SseBI | AGGCCT | 1 cut(s) | 1436 |
| SsiI | CCGC | 4 cut(s) | 675, 1659, 2162, 2555 |
| SspI | AATATT | 2 cut(s) | 345, 2549 |
| SspMI | CTAG | 2 cut(s) | 2363, 2637 |
| SstI | GAGCTC | 1 cut(s) | 210 |
| StuI | AGGCCT | 1 cut(s) | 1436 |
| StyD4I | CCNGG | 4 cut(s) | 210, 387, 747, 1395 |
| StyI | CCWWGG | 2 cut(s) | 1702, 2636 |
| TaaI | ACNGT | 4 cut(s) | 1548, 1650, 2018, 2297 |
| TaiI | ACGT | 2 cut(s) | 1540, 2347 |
| TaqI | TCGA | 3 cut(s) | 976, 2058, 2321 |
| TatI | WGTACW | 1 cut(s) | 1378 |
| TscAI | CASTG | 4 cut(s) | 1808, 2272, 2300, 2636 |
| TseFI | GTSAC | 2 cut(s) | 844, 1391 |
| TseI | GCWGC | 4 cut(s) | 446, 461, 1229, 1828 |
| Tsp45I | GTSAC | 2 cut(s) | 844, 1391 |
| TspGWI | ACGGA | 3 cut(s) | 351, 1155, 1610 |
| TspRI | CASTG | 4 cut(s) | 1808, 2272, 2300, 2636 |
| VpaK11BI | GGWCC | 4 cut(s) | 1573, 1795, 2005, 2432 |
| VspI | ATTAAT | 1 cut(s) | 1715 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1527 |
| XapI | RAATTY | 9 cut(s) | 466, 1012, 1275, 1633, 1689, 1837, 1965, 2447, 2489 |
| XceI | RCATGY | 4 cut(s) | 572, 1341, 1864, 1992 |
| XmaJI | CCTAGG | 1 cut(s) | 2636 |
| XmiI | GTMKAC | 1 cut(s) | 1543 |
| XmnI | GAANNNNTTC | 5 cut(s) | 1323, 1683, 2409, 2448, 2490 |
| XspI | CTAG | 2 cut(s) | 2363, 2637 |
| Zsp2I | ATGCAT | 2 cut(s) | 268, 1476 |