TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 13 - 176 | 2.4e-54 | TIR domain |
| TIR_2 | PF13676 | 15 - 110 | 3.9e-16 | TIR domain |
| NB-ARC | PF00931 | 193 - 360 | 2.1e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 428 - 496 | 1.1e-14 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 752 - 804 | 4.3e-10 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 799 - 877 | 1.1e-15 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 875 - 949 | 1.3e-09 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 902 - 1090 | 6e-11 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 987 - 1069 | 6.9e-06 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 3861 |
| AatII | GACGTC | 1 cut(s) | 997 |
| Acc36I | ACCTGC | 2 cut(s) | 1378, 3861 |
| Acc65I | GGTACC | 1 cut(s) | 1628 |
| AccB1I | GGYRCC | 3 cut(s) | 746, 1628, 2850 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1030 |
| AccI | GTMKAC | 2 cut(s) | 1084, 2827 |
| AccII | CGCG | 2 cut(s) | 2357, 3906 |
| AciI | CCGC | 5 cut(s) | 434, 1363, 2075, 2798, 3388 |
| AclI | AACGTT | 1 cut(s) | 2252 |
| AclWI | GGATC | 9 cut(s) | 262, 320, 580, 838, 1041, 2472, 2541, 3879, 3885 |
| AcoI | YGGCCR | 2 cut(s) | 546, 816 |
| AcuI | CTGAAG | 1 cut(s) | 257 |
| AcyI | GRCGYC | 1 cut(s) | 994 |
| AfaI | GTAC | 5 cut(s) | 532, 554, 1590, 1630, 4005 |
| AfeI | AGCGCT | 1 cut(s) | 103 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 243, 1030, 1976, 2860, 3334 |
| AflII | CTTAAG | 1 cut(s) | 2410 |
| AflIII | ACRYGT | 4 cut(s) | 601, 2355, 2559, 3743 |
| AhdI | GACNNNNNGTC | 3 cut(s) | 2151, 3052, 3343 |
| AjnI | CCWGG | 4 cut(s) | 1023, 1421, 1498, 1801 |
| AleI | CACNNNNGTG | 1 cut(s) | 3485 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 603, 635, 3432, 3464 |
| Alw21I | GWGCWC | 1 cut(s) | 2121 |
| Alw26I | GTCTC | 9 cut(s) | 985, 2024, 2336, 2364, 3028, 3061, 3104, 3162, 3437 |
| Alw44I | GTGCAC | 1 cut(s) | 2117 |
| AlwI | GGATC | 9 cut(s) | 262, 320, 580, 838, 1041, 2472, 2541, 3879, 3885 |
| Ama87I | CYCGRG | 2 cut(s) | 3436, 3799 |
| Aor51HI | AGCGCT | 1 cut(s) | 103 |
| AoxI | GGCC | 7 cut(s) | 88, 546, 642, 816, 1138, 1404, 1733 |
| ApaLI | GTGCAC | 1 cut(s) | 2117 |
| ApeKI | GCWGC | 4 cut(s) | 419, 1205, 2016, 3959 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1290 |
| Asp718I | GGTACC | 1 cut(s) | 1628 |
| AspA2I | CCTAGG | 1 cut(s) | 3542 |
| AspLEI | GCGC | 1 cut(s) | 104 |
| AspS9I | GGNCC | 5 cut(s) | 403, 642, 1021, 1405, 3847 |
| AsuC2I | CCSGG | 4 cut(s) | 848, 3276, 3437, 3438 |
| AsuHPI | GGTGA | 9 cut(s) | 16, 74, 938, 1331, 2893, 3482, 3626, 3693, 3902 |
| AvaI | CYCGRG | 2 cut(s) | 3436, 3799 |
| AvaII | GGWCC | 3 cut(s) | 403, 1021, 3847 |
| AvrII | CCTAGG | 1 cut(s) | 3542 |
| BaeGI | GKGCMC | 2 cut(s) | 2121, 2855 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1825, 1858 |
| BalI | TGGCCA | 2 cut(s) | 548, 818 |
| BanI | GGYRCC | 3 cut(s) | 746, 1628, 2850 |
| BauI | CACGAG | 1 cut(s) | 573 |
| BbsI | GAAGAC | 4 cut(s) | 2000, 2744, 3900, 4068 |
| Bbv12I | GWGCWC | 1 cut(s) | 2121 |
| BbvI | GCAGC | 4 cut(s) | 431, 1192, 2003, 3971 |
| BciT130I | CCWGG | 4 cut(s) | 1025, 1423, 1500, 1803 |
| BciVI | GTATCC | 3 cut(s) | 61, 1826, 3232 |
| BclI | TGATCA | 7 cut(s) | 6, 139, 904, 2953, 3721, 3931, 4012 |
| BcnI | CCSGG | 4 cut(s) | 848, 3276, 3437, 3438 |
| BcoDI | GTCTC | 9 cut(s) | 985, 2024, 2336, 2364, 3028, 3061, 3104, 3162, 3437 |
| BfaI | CTAG | 7 cut(s) | 828, 1374, 1451, 1937, 2837, 2901, 3543 |
| BfmI | CTRYAG | 3 cut(s) | 931, 3764, 3963 |
| BfoI | RGCGCY | 1 cut(s) | 105 |
| BfrI | CTTAAG | 1 cut(s) | 2410 |
| BfuAI | ACCTGC | 2 cut(s) | 1378, 3861 |
| BfuI | GTATCC | 3 cut(s) | 61, 1826, 3232 |
| BisI | GCNGC | 7 cut(s) | 420, 435, 1206, 1363, 2017, 2798, 3960 |
| BlnI | CCTAGG | 1 cut(s) | 3542 |
| BlsI | GCNGC | 7 cut(s) | 421, 436, 1207, 1364, 2018, 2799, 3961 |
| Bme1390I | CCNGG | 8 cut(s) | 848, 1025, 1423, 1500, 1803, 3276, 3437, 3438 |
| Bme18I | GGWCC | 3 cut(s) | 403, 1021, 3847 |
| BmeRI | GACNNNNNGTC | 3 cut(s) | 2151, 3052, 3343 |
| BmeT110I | CYCGRG | 2 cut(s) | 3436, 3799 |
| BmgT120I | GGNCC | 5 cut(s) | 403, 642, 1021, 1405, 3847 |
| BmiI | GGNNCC | 9 cut(s) | 643, 748, 1630, 2069, 2079, 2852, 2928, 3848, 4035 |
| BmrFI | CCNGG | 8 cut(s) | 848, 1025, 1423, 1500, 1803, 3276, 3437, 3438 |
| BmrI | ACTGGG | 1 cut(s) | 551 |
| BmuI | ACTGGG | 1 cut(s) | 551 |
| BpiI | GAAGAC | 4 cut(s) | 2000, 2744, 3900, 4068 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1230, 1262 |
| BpmI | CTGGAG | 1 cut(s) | 1710 |
| BpuEI | CTTGAG | 4 cut(s) | 1034, 1738, 2048, 2117 |
| BpuMI | CCSGG | 4 cut(s) | 848, 3276, 3437, 3438 |
| Bsa29I | ATCGAT | 1 cut(s) | 2987 |
| BsaAI | YACGTR | 2 cut(s) | 602, 785 |
| BsaBI | GATNNNNATC | 5 cut(s) | 903, 2449, 3536, 3876, 4014 |
| BsaHI | GRCGYC | 1 cut(s) | 994 |
| BsaI | GGTCTC | 1 cut(s) | 3028 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 243, 1030, 1976, 2860, 3334 |
| Bse118I | RCCGGY | 1 cut(s) | 644 |
| Bse1I | ACTGG | 5 cut(s) | 308, 480, 557, 2865, 3261 |
| Bse3DI | GCAATG | 3 cut(s) | 1186, 1299, 4101 |
| Bse8I | GATNNNNATC | 5 cut(s) | 903, 2449, 3536, 3876, 4014 |
| BseBI | CCWGG | 4 cut(s) | 1025, 1423, 1500, 1803 |
| BseCI | ATCGAT | 1 cut(s) | 2987 |
| BseJI | GATNNNNATC | 5 cut(s) | 903, 2449, 3536, 3876, 4014 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 243, 1030, 1976, 2860, 3334 |
| BseMI | GCAATG | 3 cut(s) | 1186, 1299, 4101 |
| BseMII | CTCAG | 6 cut(s) | 41, 160, 474, 980, 3963, 4100 |
| BseNI | ACTGG | 5 cut(s) | 308, 480, 557, 2865, 3261 |
| BseRI | GAGGAG | 2 cut(s) | 168, 2904 |
| BseSI | GKGCMC | 2 cut(s) | 2121, 2855 |
| BseXI | GCAGC | 4 cut(s) | 431, 1192, 2003, 3971 |
| BseYI | CCCAGC | 2 cut(s) | 2979, 3103 |
| BsgI | GTGCAG | 1 cut(s) | 298 |
| Bsh1236I | CGCG | 2 cut(s) | 2357, 3906 |
| BshFI | GGCC | 7 cut(s) | 90, 548, 644, 818, 1140, 1406, 1735 |
| BshNI | GGYRCC | 3 cut(s) | 746, 1628, 2850 |
| BshVI | ATCGAT | 1 cut(s) | 2987 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2121 |
| BsiHKCI | CYCGRG | 2 cut(s) | 3436, 3799 |
| BsiSI | CCGG | 4 cut(s) | 645, 847, 3275, 3437 |
| BslFI | GGGAC | 2 cut(s) | 3291, 3640 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 243, 1030, 1976, 2860, 3334 |
| BsmAI | GTCTC | 9 cut(s) | 985, 2024, 2336, 2364, 3028, 3061, 3104, 3162, 3437 |
| BsmBI | CGTCTC | 2 cut(s) | 985, 2364 |
| BsmFI | GGGAC | 2 cut(s) | 3291, 3640 |
| BsmI | GAATGC | 3 cut(s) | 389, 1072, 2176 |
| BsnI | GGCC | 7 cut(s) | 90, 548, 644, 818, 1140, 1406, 1735 |
| Bso31I | GGTCTC | 1 cut(s) | 3028 |
| BsoBI | CYCGRG | 2 cut(s) | 3436, 3799 |
| Bsp1286I | GDGCHC | 2 cut(s) | 2121, 2855 |
| Bsp19I | CCATGG | 1 cut(s) | 29 |
| BspACI | CCGC | 5 cut(s) | 434, 1363, 2075, 2798, 3388 |
| BspANI | GGCC | 7 cut(s) | 90, 548, 644, 818, 1140, 1406, 1735 |
| BspCNI | CTCAG | 6 cut(s) | 42, 159, 473, 981, 3962, 4101 |
| BspDI | ATCGAT | 1 cut(s) | 2987 |
| BspFNI | CGCG | 2 cut(s) | 2357, 3906 |
| BspHI | TCATGA | 5 cut(s) | 379, 1039, 1525, 3718, 3880 |
| BspLI | GGNNCC | 9 cut(s) | 643, 748, 1630, 2069, 2079, 2852, 2928, 3848, 4035 |
| BspMI | ACCTGC | 2 cut(s) | 1378, 3861 |
| BspPI | GGATC | 9 cut(s) | 262, 320, 580, 838, 1041, 2472, 2541, 3879, 3885 |
| BspT107I | GGYRCC | 3 cut(s) | 746, 1628, 2850 |
| BspTI | CTTAAG | 1 cut(s) | 2410 |
| BspTNI | GGTCTC | 1 cut(s) | 3028 |
| BsrDI | GCAATG | 3 cut(s) | 1186, 1299, 4101 |
| BsrFI | RCCGGY | 1 cut(s) | 644 |
| BsrI | ACTGG | 5 cut(s) | 308, 480, 557, 2865, 3261 |
| BssAI | RCCGGY | 1 cut(s) | 644 |
| BssNI | GRCGYC | 1 cut(s) | 994 |
| BssSI | CACGAG | 1 cut(s) | 573 |
| BssT1I | CCWWGG | 9 cut(s) | 29, 1135, 2202, 2340, 2475, 2613, 3225, 3328, 3542 |
| Bst2BI | CACGAG | 1 cut(s) | 573 |
| Bst2UI | CCWGG | 4 cut(s) | 1025, 1423, 1500, 1803 |
| BstACI | GRCGYC | 1 cut(s) | 994 |
| BstAFI | CTTAAG | 1 cut(s) | 2410 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1447 |
| BstBAI | YACGTR | 2 cut(s) | 602, 785 |
| BstC8I | GCNNGC | 3 cut(s) | 3109, 3904, 4072 |
| BstDSI | CCRYGG | 1 cut(s) | 29 |
| BstFNI | CGCG | 2 cut(s) | 2357, 3906 |
| BstH2I | RGCGCY | 1 cut(s) | 105 |
| BstHHI | GCGC | 1 cut(s) | 104 |
| BstMAI | GTCTC | 9 cut(s) | 985, 2024, 2336, 2364, 3028, 3061, 3104, 3162, 3437 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 824, 1447, 3684, 3965, 4100 |
| BstNI | CCWGG | 4 cut(s) | 1025, 1423, 1500, 1803 |
| BstNSI | RCATGY | 3 cut(s) | 1308, 1648, 3747 |
| BstSCI | CCNGG | 8 cut(s) | 846, 1023, 1421, 1498, 1801, 3274, 3435, 3436 |
| BstSFI | CTRYAG | 3 cut(s) | 931, 3764, 3963 |
| BstSLI | GKGCMC | 2 cut(s) | 2121, 2855 |
| BstUI | CGCG | 2 cut(s) | 2357, 3906 |
| BstV1I | GCAGC | 4 cut(s) | 431, 1192, 2003, 3971 |
| BstV2I | GAAGAC | 4 cut(s) | 2000, 2744, 3900, 4068 |
| BstX2I | RGATCY | 4 cut(s) | 267, 585, 2464, 2533 |
| BstYI | RGATCY | 4 cut(s) | 267, 585, 2464, 2533 |
| Bsu15I | ATCGAT | 1 cut(s) | 2987 |
| BsuI | GTATCC | 3 cut(s) | 61, 1826, 3232 |
| BsuRI | GGCC | 7 cut(s) | 90, 548, 644, 818, 1140, 1406, 1735 |
| BsuTUI | ATCGAT | 1 cut(s) | 2987 |
| BtgI | CCRYGG | 1 cut(s) | 29 |
| BtsIMutI | CAGTG | 4 cut(s) | 281, 487, 1275, 3024 |
| BveI | ACCTGC | 2 cut(s) | 1378, 3861 |
| Cac8I | GCNNGC | 3 cut(s) | 3109, 3904, 4072 |
| CciI | TCATGA | 5 cut(s) | 379, 1039, 1525, 3718, 3880 |
| CfoI | GCGC | 1 cut(s) | 104 |
| Cfr10I | RCCGGY | 1 cut(s) | 644 |
| Cfr13I | GGNCC | 5 cut(s) | 403, 642, 1021, 1405, 3847 |
| Cfr9I | CCCGGG | 1 cut(s) | 3436 |
| ClaI | ATCGAT | 1 cut(s) | 2987 |
| CseI | GACGC | 5 cut(s) | 98, 1829, 2346, 2363, 2498 |
| Csp6I | GTAC | 5 cut(s) | 531, 553, 1589, 1629, 4004 |
| CviQI | GTAC | 5 cut(s) | 531, 553, 1589, 1629, 4004 |
| DraI | TTTAAA | 1 cut(s) | 1075 |
| DriI | GACNNNNNGTC | 3 cut(s) | 2151, 3052, 3343 |
| EaeI | YGGCCR | 2 cut(s) | 546, 816 |
| Eam1105I | GACNNNNNGTC | 3 cut(s) | 2151, 3052, 3343 |
| Eco130I | CCWWGG | 9 cut(s) | 29, 1135, 2202, 2340, 2475, 2613, 3225, 3328, 3542 |
| Eco147I | AGGCCT | 1 cut(s) | 1140 |
| Eco31I | GGTCTC | 1 cut(s) | 3028 |
| Eco32I | GATATC | 1 cut(s) | 3806 |
| Eco47I | GGWCC | 3 cut(s) | 403, 1021, 3847 |
| Eco47III | AGCGCT | 1 cut(s) | 103 |
| Eco57I | CTGAAG | 1 cut(s) | 257 |
| Eco88I | CYCGRG | 2 cut(s) | 3436, 3799 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1405 |
| EcoRII | CCWGG | 4 cut(s) | 1023, 1421, 1498, 1801 |
| EcoRV | GATATC | 1 cut(s) | 3806 |
| EcoT14I | CCWWGG | 9 cut(s) | 29, 1135, 2202, 2340, 2475, 2613, 3225, 3328, 3542 |
| EcoT22I | ATGCAT | 2 cut(s) | 235, 1443 |
| ErhI | CCWWGG | 9 cut(s) | 29, 1135, 2202, 2340, 2475, 2613, 3225, 3328, 3542 |
| Esp3I | CGTCTC | 2 cut(s) | 985, 2364 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 233, 265, 1072, 1104 |
| FaqI | GGGAC | 2 cut(s) | 3291, 3640 |
| FbaI | TGATCA | 7 cut(s) | 6, 139, 904, 2953, 3721, 3931, 4012 |
| FblI | GTMKAC | 2 cut(s) | 1084, 2827 |
| Fnu4HI | GCNGC | 7 cut(s) | 420, 435, 1206, 1363, 2017, 2798, 3960 |
| Fsp4HI | GCNGC | 7 cut(s) | 420, 435, 1206, 1363, 2017, 2798, 3960 |
| FspBI | CTAG | 7 cut(s) | 828, 1374, 1451, 1937, 2837, 2901, 3543 |
| GlaI | GCGC | 1 cut(s) | 103 |
| GluI | GCNGC | 7 cut(s) | 420, 435, 1206, 1363, 2017, 2798, 3960 |
| GsaI | CCCAGC | 2 cut(s) | 2983, 3107 |
| GsuI | CTGGAG | 1 cut(s) | 1710 |
| HaeII | RGCGCY | 1 cut(s) | 105 |
| HaeIII | GGCC | 7 cut(s) | 90, 548, 644, 818, 1140, 1406, 1735 |
| HapII | CCGG | 4 cut(s) | 645, 847, 3275, 3437 |
| HgaI | GACGC | 5 cut(s) | 98, 1829, 2346, 2363, 2498 |
| HhaI | GCGC | 1 cut(s) | 104 |
| Hin1I | GRCGYC | 1 cut(s) | 994 |
| Hin6I | GCGC | 1 cut(s) | 102 |
| HinP1I | GCGC | 1 cut(s) | 102 |
| HincII | GTYRAC | 1 cut(s) | 1085 |
| HindII | GTYRAC | 1 cut(s) | 1085 |
| HindIII | AAGCTT | 3 cut(s) | 593, 1052, 1353 |
| HpaII | CCGG | 4 cut(s) | 645, 847, 3275, 3437 |
| HphI | GGTGA | 9 cut(s) | 16, 74, 938, 1331, 2893, 3482, 3626, 3693, 3902 |
| Hpy99I | CGWCG | 1 cut(s) | 2579 |
| HpyCH4IV | ACGT | 8 cut(s) | 601, 784, 994, 1117, 1389, 2252, 2559, 2824 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 824, 1447, 3684, 3965, 4100 |
| HpySE526I | ACGT | 8 cut(s) | 601, 784, 994, 1117, 1389, 2252, 2559, 2824 |
| Hsp92I | GRCGYC | 1 cut(s) | 994 |
| HspAI | GCGC | 1 cut(s) | 102 |
| KpnI | GGTACC | 1 cut(s) | 1632 |
| Ksp22I | TGATCA | 7 cut(s) | 6, 139, 904, 2953, 3721, 3931, 4012 |
| LmnI | GCTCC | 4 cut(s) | 2013, 2419, 3760, 3834 |
| Lsp1109I | GCAGC | 4 cut(s) | 431, 1192, 2003, 3971 |
| MaeI | CTAG | 7 cut(s) | 828, 1374, 1451, 1937, 2837, 2901, 3543 |
| MaeII | ACGT | 8 cut(s) | 601, 784, 994, 1117, 1389, 2252, 2559, 2824 |
| MaeIII | GTNAC | 4 cut(s) | 926, 1256, 2863, 3634 |
| MfeI | CAATTG | 9 cut(s) | 296, 666, 690, 983, 2457, 2526, 2595, 2664, 2733 |
| MflI | RGATCY | 4 cut(s) | 267, 585, 2464, 2533 |
| MhlI | GDGCHC | 2 cut(s) | 2121, 2855 |
| MlsI | TGGCCA | 2 cut(s) | 548, 818 |
| MluI | ACGCGT | 1 cut(s) | 2355 |
| MluNI | TGGCCA | 2 cut(s) | 548, 818 |
| MlyI | GAGTC | 8 cut(s) | 448, 1493, 1816, 2014, 2138, 2140, 3716, 3941 |
| MmeI | TCCRAC | 4 cut(s) | 1957, 2033, 2673, 4070 |
| Mox20I | TGGCCA | 2 cut(s) | 548, 818 |
| Mph1103I | ATGCAT | 2 cut(s) | 235, 1443 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1290 |
| MscI | TGGCCA | 2 cut(s) | 548, 818 |
| MslI | CAYNNNNRTG | 7 cut(s) | 131, 1436, 3338, 3485, 3723, 3885, 4020 |
| Msp20I | TGGCCA | 2 cut(s) | 548, 818 |
| MspA1I | CMGCKG | 1 cut(s) | 3962 |
| MspCI | CTTAAG | 1 cut(s) | 2410 |
| MspI | CCGG | 4 cut(s) | 645, 847, 3275, 3437 |
| MspR9I | CCNGG | 8 cut(s) | 848, 1025, 1423, 1500, 1803, 3276, 3437, 3438 |
| MunI | CAATTG | 9 cut(s) | 296, 666, 690, 983, 2457, 2526, 2595, 2664, 2733 |
| Mva1269I | GAATGC | 3 cut(s) | 389, 1072, 2176 |
| MvaI | CCWGG | 4 cut(s) | 1025, 1423, 1500, 1803 |
| MvnI | CGCG | 2 cut(s) | 2357, 3906 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 824, 1447, 3684, 3965, 4100 |
| NciI | CCSGG | 4 cut(s) | 848, 3276, 3437, 3438 |
| NcoI | CCATGG | 1 cut(s) | 29 |
| NlaIV | GGNNCC | 9 cut(s) | 643, 748, 1630, 2069, 2079, 2852, 2928, 3848, 4035 |
| NmuCI | GTSAC | 2 cut(s) | 926, 3634 |
| NsiI | ATGCAT | 2 cut(s) | 235, 1443 |
| NspI | RCATGY | 3 cut(s) | 1308, 1648, 3747 |
| OliI | CACNNNNGTG | 1 cut(s) | 3485 |
| PaeR7I | CTCGAG | 1 cut(s) | 3799 |
| PagI | TCATGA | 5 cut(s) | 379, 1039, 1525, 3718, 3880 |
| PaqCI | CACCTGC | 1 cut(s) | 3861 |
| PceI | AGGCCT | 1 cut(s) | 1140 |
| PciI | ACATGT | 1 cut(s) | 3743 |
| PctI | GAATGC | 3 cut(s) | 389, 1072, 2176 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1290 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1030 |
| PfoI | TCCNGGA | 3 cut(s) | 846, 1023, 3274 |
| PkrI | GCNGC | 7 cut(s) | 421, 436, 1207, 1364, 2018, 2799, 3961 |
| PleI | GAGTC | 8 cut(s) | 448, 1492, 1815, 2013, 2137, 2140, 3715, 3941 |
| PpsI | GAGTC | 8 cut(s) | 448, 1492, 1815, 2013, 2137, 2140, 3715, 3941 |
| Ppu21I | YACGTR | 2 cut(s) | 602, 785 |
| PscI | ACATGT | 1 cut(s) | 3743 |
| Psp1406I | AACGTT | 1 cut(s) | 2252 |
| Psp6I | CCWGG | 4 cut(s) | 1023, 1421, 1498, 1801 |
| PspFI | CCCAGC | 2 cut(s) | 2979, 3103 |
| PspGI | CCWGG | 4 cut(s) | 1023, 1421, 1498, 1801 |
| PspN4I | GGNNCC | 9 cut(s) | 643, 748, 1630, 2069, 2079, 2852, 2928, 3848, 4035 |
| PspPI | GGNCC | 5 cut(s) | 403, 642, 1021, 1405, 3847 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 1107, 1139, 1773, 1805 |
| PsuI | RGATCY | 4 cut(s) | 267, 585, 2464, 2533 |
| PvuII | CAGCTG | 1 cut(s) | 3962 |
| RsaI | GTAC | 5 cut(s) | 532, 554, 1590, 1630, 4005 |
| RsaNI | GTAC | 5 cut(s) | 531, 553, 1589, 1629, 4004 |
| RseI | CAYNNNNRTG | 7 cut(s) | 131, 1436, 3338, 3485, 3723, 3885, 4020 |
| SalI | GTCGAC | 1 cut(s) | 1083 |
| SatI | GCNGC | 7 cut(s) | 420, 435, 1206, 1363, 2017, 2798, 3960 |
| Sau96I | GGNCC | 5 cut(s) | 403, 642, 1021, 1405, 3847 |
| SchI | GAGTC | 8 cut(s) | 448, 1493, 1816, 2014, 2138, 2140, 3716, 3941 |
| ScrFI | CCNGG | 8 cut(s) | 848, 1025, 1423, 1500, 1803, 3276, 3437, 3438 |
| SduI | GDGCHC | 2 cut(s) | 2121, 2855 |
| SfcI | CTRYAG | 3 cut(s) | 931, 3764, 3963 |
| Sfr274I | CTCGAG | 1 cut(s) | 3799 |
| SinI | GGWCC | 3 cut(s) | 403, 1021, 3847 |
| SlaI | CTCGAG | 1 cut(s) | 3799 |
| SmaI | CCCGGG | 1 cut(s) | 3438 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 131, 1436, 3338, 3485, 3723, 3885, 4020 |
| SmlI | CTYRAG | 6 cut(s) | 1049, 1717, 2027, 2096, 2410, 3799 |
| SmoI | CTYRAG | 6 cut(s) | 1049, 1717, 2027, 2096, 2410, 3799 |
| SseBI | AGGCCT | 1 cut(s) | 1140 |
| SsiI | CCGC | 5 cut(s) | 434, 1363, 2075, 2798, 3388 |
| SspI | AATATT | 1 cut(s) | 1558 |
| SspMI | CTAG | 7 cut(s) | 828, 1374, 1451, 1937, 2837, 2901, 3543 |
| StuI | AGGCCT | 1 cut(s) | 1140 |
| StyD4I | CCNGG | 8 cut(s) | 846, 1023, 1421, 1498, 1801, 3274, 3435, 3436 |
| StyI | CCWWGG | 9 cut(s) | 29, 1135, 2202, 2340, 2475, 2613, 3225, 3328, 3542 |
| TaiI | ACGT | 8 cut(s) | 604, 787, 997, 1120, 1392, 2255, 2562, 2827 |
| TatI | WGTACW | 2 cut(s) | 530, 4003 |
| TauI | GCSGC | 3 cut(s) | 437, 1365, 2800 |
| TscAI | CASTG | 4 cut(s) | 281, 487, 1282, 3024 |
| TseFI | GTSAC | 2 cut(s) | 926, 3634 |
| TseI | GCWGC | 4 cut(s) | 419, 1205, 2016, 3959 |
| Tsp45I | GTSAC | 2 cut(s) | 926, 3634 |
| TspGWI | ACGGA | 1 cut(s) | 2826 |
| TspMI | CCCGGG | 1 cut(s) | 3436 |
| TspRI | CASTG | 4 cut(s) | 281, 487, 1282, 3024 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1030 |
| Vha464I | CTTAAG | 1 cut(s) | 2410 |
| VneI | GTGCAC | 1 cut(s) | 2117 |
| VpaK11BI | GGWCC | 3 cut(s) | 403, 1021, 3847 |
| XbaI | TCTAGA | 2 cut(s) | 1936, 2836 |
| XceI | RCATGY | 3 cut(s) | 1308, 1648, 3747 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 247, 3608 |
| XhoI | CTCGAG | 1 cut(s) | 3799 |
| XmaI | CCCGGG | 1 cut(s) | 3436 |
| XmaJI | CCTAGG | 1 cut(s) | 3542 |
| XmiI | GTMKAC | 2 cut(s) | 1084, 2827 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1290 |
| XspI | CTAG | 7 cut(s) | 828, 1374, 1451, 1937, 2837, 2901, 3543 |
| ZraI | GACGTC | 1 cut(s) | 995 |
| Zsp2I | ATGCAT | 2 cut(s) | 235, 1443 |