TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| CDC50 | PF03381 | 67 - 331 | 1.1e-80 | LEM3 (ligand-effect modulator 3) family / CDC50 family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 662 |
| AccI | GTMKAC | 1 cut(s) | 336 |
| AciI | CCGC | 1 cut(s) | 736 |
| AfaI | GTAC | 2 cut(s) | 326, 452 |
| AgsI | TTSAA | 7 cut(s) | 224, 331, 649, 782, 793, 876, 939 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 407 |
| AjnI | CCWGG | 1 cut(s) | 989 |
| AluBI | AGCT | 7 cut(s) | 80, 353, 376, 433, 685, 743, 865 |
| AluI | AGCT | 7 cut(s) | 80, 353, 376, 433, 685, 743, 865 |
| Alw21I | GWGCWC | 1 cut(s) | 46 |
| Alw26I | GTCTC | 1 cut(s) | 110 |
| ApeKI | GCWGC | 2 cut(s) | 743, 970 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 905 |
| AspS9I | GGNCC | 1 cut(s) | 232 |
| AsuHPI | GGTGA | 1 cut(s) | 154 |
| AvaII | GGWCC | 1 cut(s) | 232 |
| AxyI | CCTNAGG | 1 cut(s) | 477 |
| BanI | GGYRCC | 1 cut(s) | 662 |
| BbsI | GAAGAC | 2 cut(s) | 488, 955 |
| Bbv12I | GWGCWC | 1 cut(s) | 46 |
| BbvI | GCAGC | 2 cut(s) | 730, 957 |
| BccI | CCATC | 3 cut(s) | 5, 157, 664 |
| BceAI | ACGGC | 1 cut(s) | 676 |
| BciT130I | CCWGG | 1 cut(s) | 991 |
| BclI | TGATCA | 2 cut(s) | 616, 709 |
| BcoDI | GTCTC | 1 cut(s) | 110 |
| BfaI | CTAG | 1 cut(s) | 36 |
| BglII | AGATCT | 1 cut(s) | 718 |
| BisI | GCNGC | 2 cut(s) | 744, 971 |
| BlsI | GCNGC | 2 cut(s) | 745, 972 |
| Bme1390I | CCNGG | 1 cut(s) | 991 |
| Bme18I | GGWCC | 1 cut(s) | 232 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 407 |
| BmgT120I | GGNCC | 1 cut(s) | 232 |
| BmiI | GGNNCC | 2 cut(s) | 466, 664 |
| BmrFI | CCNGG | 1 cut(s) | 991 |
| BmrI | ACTGGG | 1 cut(s) | 747 |
| BmsI | GCATC | 1 cut(s) | 723 |
| BmuI | ACTGGG | 1 cut(s) | 747 |
| BpiI | GAAGAC | 2 cut(s) | 488, 955 |
| BsaJI | CCNNGG | 2 cut(s) | 910, 989 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 449, 479 |
| Bse1I | ACTGG | 1 cut(s) | 753 |
| Bse21I | CCTNAGG | 1 cut(s) | 477 |
| BseBI | CCWGG | 1 cut(s) | 991 |
| BseDI | CCNNGG | 2 cut(s) | 910, 989 |
| BseGI | GGATG | 2 cut(s) | 16, 738 |
| BseMII | CTCAG | 3 cut(s) | 110, 201, 468 |
| BseNI | ACTGG | 1 cut(s) | 753 |
| BseRI | GAGGAG | 1 cut(s) | 494 |
| BseXI | GCAGC | 2 cut(s) | 730, 957 |
| BsgI | GTGCAG | 2 cut(s) | 729, 907 |
| BshNI | GGYRCC | 1 cut(s) | 662 |
| BsiHKAI | GWGCWC | 1 cut(s) | 46 |
| BslFI | GGGAC | 1 cut(s) | 239 |
| BsmAI | GTCTC | 1 cut(s) | 110 |
| BsmFI | GGGAC | 1 cut(s) | 239 |
| BsmI | GAATGC | 2 cut(s) | 263, 799 |
| Bsp1286I | GDGCHC | 1 cut(s) | 46 |
| Bsp143I | GATC | 5 cut(s) | 424, 566, 616, 709, 718 |
| BspACI | CCGC | 1 cut(s) | 736 |
| BspCNI | CTCAG | 3 cut(s) | 109, 202, 469 |
| BspLI | GGNNCC | 2 cut(s) | 466, 664 |
| BspT107I | GGYRCC | 1 cut(s) | 662 |
| BsrI | ACTGG | 1 cut(s) | 753 |
| BssECI | CCNNGG | 2 cut(s) | 910, 989 |
| BssMI | GATC | 5 cut(s) | 424, 566, 616, 709, 718 |
| BssT1I | CCWWGG | 1 cut(s) | 910 |
| Bst2UI | CCWGG | 1 cut(s) | 991 |
| Bst4CI | ACNGT | 3 cut(s) | 317, 405, 614 |
| Bst6I | CTCTTC | 4 cut(s) | 204, 599, 626, 777 |
| BstC8I | GCNNGC | 2 cut(s) | 918, 922 |
| BstDEI | CTNAG | 4 cut(s) | 96, 210, 477, 704 |
| BstF5I | GGATG | 2 cut(s) | 16, 738 |
| BstKTI | GATC | 5 cut(s) | 427, 569, 619, 712, 721 |
| BstMAI | GTCTC | 1 cut(s) | 110 |
| BstMBI | GATC | 5 cut(s) | 424, 566, 616, 709, 718 |
| BstNI | CCWGG | 1 cut(s) | 991 |
| BstSCI | CCNGG | 1 cut(s) | 989 |
| BstV1I | GCAGC | 2 cut(s) | 730, 957 |
| BstV2I | GAAGAC | 2 cut(s) | 488, 955 |
| BstX2I | RGATCY | 1 cut(s) | 718 |
| BstYI | RGATCY | 1 cut(s) | 718 |
| Bsu36I | CCTNAGG | 1 cut(s) | 477 |
| BtsCI | GGATG | 2 cut(s) | 16, 738 |
| Cac8I | GCNNGC | 2 cut(s) | 918, 922 |
| Cfr13I | GGNCC | 1 cut(s) | 232 |
| Csp6I | GTAC | 2 cut(s) | 325, 451 |
| CviAII | CATG | 6 cut(s) | 138, 203, 440, 525, 600, 979 |
| CviQI | GTAC | 2 cut(s) | 325, 451 |
| DdeI | CTNAG | 4 cut(s) | 96, 210, 477, 704 |
| DpnI | GATC | 5 cut(s) | 426, 568, 618, 711, 720 |
| DpnII | GATC | 5 cut(s) | 424, 566, 616, 709, 718 |
| DriI | GACNNNNNGTC | 1 cut(s) | 407 |
| Eam1104I | CTCTTC | 4 cut(s) | 204, 599, 626, 777 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 407 |
| EarI | CTCTTC | 4 cut(s) | 204, 599, 626, 777 |
| Eco130I | CCWWGG | 1 cut(s) | 910 |
| Eco47I | GGWCC | 1 cut(s) | 232 |
| Eco81I | CCTNAGG | 1 cut(s) | 477 |
| EcoRII | CCWGG | 1 cut(s) | 989 |
| EcoT14I | CCWWGG | 1 cut(s) | 910 |
| ErhI | CCWWGG | 1 cut(s) | 910 |
| FaeI | CATG | 6 cut(s) | 141, 206, 443, 528, 603, 982 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 705, 737, 890, 922 |
| FaqI | GGGAC | 1 cut(s) | 239 |
| FatI | CATG | 6 cut(s) | 137, 202, 439, 524, 599, 978 |
| FauNDI | CATATG | 1 cut(s) | 345 |
| FbaI | TGATCA | 2 cut(s) | 616, 709 |
| FblI | GTMKAC | 1 cut(s) | 336 |
| Fnu4HI | GCNGC | 2 cut(s) | 744, 971 |
| FokI | GGATG | 2 cut(s) | 23, 745 |
| Fsp4HI | GCNGC | 2 cut(s) | 744, 971 |
| FspBI | CTAG | 1 cut(s) | 36 |
| GluI | GCNGC | 2 cut(s) | 744, 971 |
| Hin1II | CATG | 6 cut(s) | 141, 206, 443, 528, 603, 982 |
| HincII | GTYRAC | 1 cut(s) | 583 |
| HindII | GTYRAC | 1 cut(s) | 583 |
| HindIII | AAGCTT | 2 cut(s) | 78, 863 |
| HinfI | GANTC | 6 cut(s) | 21, 103, 304, 482, 696, 994 |
| HphI | GGTGA | 1 cut(s) | 154 |
| Hpy166II | GTNNAC | 5 cut(s) | 119, 232, 337, 473, 583 |
| Hpy188I | TCNGA | 5 cut(s) | 211, 269, 393, 571, 657 |
| Hpy188III | TCNNGA | 2 cut(s) | 66, 713 |
| Hpy8I | GTNNAC | 5 cut(s) | 119, 232, 337, 473, 583 |
| HpyAV | CCTTC | 2 cut(s) | 325, 655 |
| HpyCH4III | ACNGT | 3 cut(s) | 317, 405, 614 |
| HpyCH4V | TGCA | 3 cut(s) | 746, 797, 924 |
| HpyF3I | CTNAG | 4 cut(s) | 96, 210, 477, 704 |
| Hsp92II | CATG | 6 cut(s) | 141, 206, 443, 528, 603, 982 |
| Ksp22I | TGATCA | 2 cut(s) | 616, 709 |
| Kzo9I | GATC | 5 cut(s) | 424, 566, 616, 709, 718 |
| LmnI | GCTCC | 3 cut(s) | 358, 470, 978 |
| Lsp1109I | GCAGC | 2 cut(s) | 730, 957 |
| LweI | GCATC | 1 cut(s) | 723 |
| MaeI | CTAG | 1 cut(s) | 36 |
| MaeIII | GTNAC | 2 cut(s) | 608, 820 |
| MalI | GATC | 5 cut(s) | 426, 568, 618, 711, 720 |
| MboI | GATC | 5 cut(s) | 424, 566, 616, 709, 718 |
| MfeI | CAATTG | 1 cut(s) | 501 |
| MflI | RGATCY | 1 cut(s) | 718 |
| MhlI | GDGCHC | 1 cut(s) | 46 |
| MluCI | AATT | 4 cut(s) | 89, 501, 649, 777 |
| MlyI | GAGTC | 2 cut(s) | 112, 491 |
| MmeI | TCCRAC | 1 cut(s) | 510 |
| MnlI | CCTC | 8 cut(s) | 8, 137, 217, 472, 711, 778, 845, 887 |
| MroXI | GAANNNNTTC | 1 cut(s) | 905 |
| MseI | TTAA | 4 cut(s) | 26, 518, 537, 575 |
| MslI | CAYNNNNRTG | 2 cut(s) | 136, 668 |
| MspA1I | CMGCKG | 1 cut(s) | 743 |
| MspR9I | CCNGG | 1 cut(s) | 991 |
| MunI | CAATTG | 1 cut(s) | 501 |
| Mva1269I | GAATGC | 2 cut(s) | 263, 799 |
| MvaI | CCWGG | 1 cut(s) | 991 |
| NdeI | CATATG | 1 cut(s) | 345 |
| NdeII | GATC | 5 cut(s) | 424, 566, 616, 709, 718 |
| NlaIII | CATG | 6 cut(s) | 141, 206, 443, 528, 603, 982 |
| NlaIV | GGNNCC | 2 cut(s) | 466, 664 |
| NmuCI | GTSAC | 1 cut(s) | 608 |
| PctI | GAATGC | 2 cut(s) | 263, 799 |
| PdmI | GAANNNNTTC | 1 cut(s) | 905 |
| PfeI | GAWTC | 4 cut(s) | 21, 304, 696, 994 |
| PkrI | GCNGC | 2 cut(s) | 745, 972 |
| PleI | GAGTC | 2 cut(s) | 111, 490 |
| PpsI | GAGTC | 2 cut(s) | 111, 490 |
| Psp6I | CCWGG | 1 cut(s) | 989 |
| PspGI | CCWGG | 1 cut(s) | 989 |
| PspN4I | GGNNCC | 2 cut(s) | 466, 664 |
| PspPI | GGNCC | 1 cut(s) | 232 |
| PsuI | RGATCY | 1 cut(s) | 718 |
| PvuII | CAGCTG | 1 cut(s) | 743 |
| RsaI | GTAC | 2 cut(s) | 326, 452 |
| RsaNI | GTAC | 2 cut(s) | 325, 451 |
| RseI | CAYNNNNRTG | 2 cut(s) | 136, 668 |
| SaqAI | TTAA | 4 cut(s) | 26, 518, 537, 575 |
| SatI | GCNGC | 2 cut(s) | 744, 971 |
| Sau3AI | GATC | 5 cut(s) | 424, 566, 616, 709, 718 |
| Sau96I | GGNCC | 1 cut(s) | 232 |
| SchI | GAGTC | 2 cut(s) | 112, 491 |
| ScrFI | CCNGG | 1 cut(s) | 991 |
| SduI | GDGCHC | 1 cut(s) | 46 |
| SfaNI | GCATC | 1 cut(s) | 723 |
| SinI | GGWCC | 1 cut(s) | 232 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 136, 668 |
| Sse9I | AATT | 4 cut(s) | 89, 501, 649, 777 |
| SsiI | CCGC | 1 cut(s) | 736 |
| SspMI | CTAG | 1 cut(s) | 36 |
| StyD4I | CCNGG | 1 cut(s) | 989 |
| StyI | CCWWGG | 1 cut(s) | 910 |
| TaaI | ACNGT | 3 cut(s) | 317, 405, 614 |
| TaqI | TCGA | 2 cut(s) | 302, 427 |
| TaqII | GACCGA | 1 cut(s) | 249 |
| TasI | AATT | 4 cut(s) | 89, 501, 649, 777 |
| TfiI | GAWTC | 4 cut(s) | 21, 304, 696, 994 |
| Tru1I | TTAA | 4 cut(s) | 26, 518, 537, 575 |
| Tru9I | TTAA | 4 cut(s) | 26, 518, 537, 575 |
| TseFI | GTSAC | 1 cut(s) | 608 |
| TseI | GCWGC | 2 cut(s) | 743, 970 |
| Tsp45I | GTSAC | 1 cut(s) | 608 |
| TspDTI | ATGAA | 5 cut(s) | 166, 191, 362, 940, 995 |
| TspGWI | ACGGA | 1 cut(s) | 749 |
| VpaK11BI | GGWCC | 1 cut(s) | 232 |
| XmiI | GTMKAC | 1 cut(s) | 336 |
| XmnI | GAANNNNTTC | 1 cut(s) | 905 |
| XspI | CTAG | 1 cut(s) | 36 |