Tether containing UBX domain for
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 558 |
| AciI | CCGC | 1 cut(s) | 558 |
| AclWI | GGATC | 2 cut(s) | 511, 730 |
| AcoI | YGGCCR | 1 cut(s) | 661 |
| AcsI | RAATTY | 2 cut(s) | 20, 683 |
| AcuI | CTGAAG | 1 cut(s) | 680 |
| AfaI | GTAC | 2 cut(s) | 329, 562 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 166, 167, 273, 294 |
| AgeI | ACCGGT | 1 cut(s) | 65 |
| AgsI | TTSAA | 5 cut(s) | 20, 118, 394, 491, 617 |
| AjnI | CCWGG | 2 cut(s) | 30, 377 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 284, 316, 483, 515 |
| AluBI | AGCT | 9 cut(s) | 16, 37, 73, 317, 353, 389, 403, 604, 818 |
| AluI | AGCT | 9 cut(s) | 16, 37, 73, 317, 353, 389, 403, 604, 818 |
| Alw26I | GTCTC | 2 cut(s) | 116, 186 |
| AlwI | GGATC | 2 cut(s) | 511, 730 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 403 |
| Ama87I | CYCGRG | 3 cut(s) | 166, 348, 813 |
| AoxI | GGCC | 4 cut(s) | 169, 296, 438, 661 |
| ApaI | GGGCCC | 1 cut(s) | 173 |
| ApeKI | GCWGC | 5 cut(s) | 353, 400, 818, 821, 824 |
| ApoI | RAATTY | 2 cut(s) | 20, 683 |
| AsiGI | ACCGGT | 1 cut(s) | 65 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 101, 318 |
| AspS9I | GGNCC | 2 cut(s) | 169, 170 |
| AsuC2I | CCSGG | 2 cut(s) | 332, 534 |
| AsuHPI | GGTGA | 3 cut(s) | 80, 119, 538 |
| AsuII | TTCGAA | 1 cut(s) | 26 |
| AvaI | CYCGRG | 3 cut(s) | 166, 348, 813 |
| BaeGI | GKGCMC | 1 cut(s) | 173 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 552, 585 |
| BalI | TGGCCA | 1 cut(s) | 663 |
| BanII | GRGCYC | 2 cut(s) | 173, 814 |
| BbvI | GCAGC | 3 cut(s) | 340, 412, 805 |
| BccI | CCATC | 3 cut(s) | 623, 638, 710 |
| BciT130I | CCWGG | 2 cut(s) | 32, 379 |
| BclI | TGATCA | 1 cut(s) | 598 |
| BcnI | CCSGG | 2 cut(s) | 332, 534 |
| BcoDI | GTCTC | 2 cut(s) | 116, 186 |
| BfmI | CTRYAG | 2 cut(s) | 539, 819 |
| BisI | GCNGC | 5 cut(s) | 354, 401, 819, 822, 825 |
| BlsI | GCNGC | 5 cut(s) | 355, 402, 820, 823, 826 |
| Bme1390I | CCNGG | 4 cut(s) | 32, 332, 379, 534 |
| BmeT110I | CYCGRG | 3 cut(s) | 166, 348, 813 |
| BmgT120I | GGNCC | 2 cut(s) | 169, 170 |
| BmiI | GGNNCC | 1 cut(s) | 171 |
| BmrFI | CCNGG | 4 cut(s) | 32, 332, 379, 534 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 269, 301 |
| Bpu14I | TTCGAA | 1 cut(s) | 26 |
| BpuEI | CTTGAG | 1 cut(s) | 440 |
| BpuMI | CCSGG | 2 cut(s) | 332, 534 |
| BsaJI | CCNNGG | 3 cut(s) | 90, 165, 664 |
| BsaWI | WCCGGW | 1 cut(s) | 65 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 166, 167, 273, 294 |
| Bse118I | RCCGGY | 2 cut(s) | 65, 523 |
| Bse3DI | GCAATG | 1 cut(s) | 601 |
| BseBI | CCWGG | 2 cut(s) | 32, 379 |
| BseDI | CCNNGG | 3 cut(s) | 90, 165, 664 |
| BseGI | GGATG | 4 cut(s) | 373, 631, 721, 746 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 166, 167, 273, 294 |
| BseMI | GCAATG | 1 cut(s) | 601 |
| BseSI | GKGCMC | 1 cut(s) | 173 |
| BseXI | GCAGC | 3 cut(s) | 340, 412, 805 |
| BshFI | GGCC | 4 cut(s) | 171, 298, 440, 663 |
| BshTI | ACCGGT | 1 cut(s) | 65 |
| BsiHKCI | CYCGRG | 3 cut(s) | 166, 348, 813 |
| BsiSI | CCGG | 4 cut(s) | 66, 331, 524, 533 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 166, 167, 273, 294 |
| BsmAI | GTCTC | 2 cut(s) | 116, 186 |
| BsmBI | CGTCTC | 1 cut(s) | 186 |
| BsmI | GAATGC | 1 cut(s) | 198 |
| BsnI | GGCC | 4 cut(s) | 171, 298, 440, 663 |
| BsoBI | CYCGRG | 3 cut(s) | 166, 348, 813 |
| Bsp119I | TTCGAA | 1 cut(s) | 26 |
| Bsp120I | GGGCCC | 1 cut(s) | 169 |
| Bsp1286I | GDGCHC | 2 cut(s) | 173, 814 |
| Bsp143I | GATC | 4 cut(s) | 503, 598, 722, 745 |
| Bsp19I | CCATGG | 1 cut(s) | 90 |
| BspACI | CCGC | 1 cut(s) | 558 |
| BspANI | GGCC | 4 cut(s) | 171, 298, 440, 663 |
| BspLI | GGNNCC | 1 cut(s) | 171 |
| BspMAI | CTGCAG | 2 cut(s) | 543, 823 |
| BspPI | GGATC | 2 cut(s) | 511, 730 |
| BspT104I | TTCGAA | 1 cut(s) | 26 |
| BsrBI | CCGCTC | 1 cut(s) | 558 |
| BsrDI | GCAATG | 1 cut(s) | 601 |
| BsrFI | RCCGGY | 2 cut(s) | 65, 523 |
| BssAI | RCCGGY | 2 cut(s) | 65, 523 |
| BssECI | CCNNGG | 3 cut(s) | 90, 165, 664 |
| BssMI | GATC | 4 cut(s) | 503, 598, 722, 745 |
| BssT1I | CCWWGG | 2 cut(s) | 90, 664 |
| Bst2UI | CCWGG | 2 cut(s) | 32, 379 |
| Bst6I | CTCTTC | 2 cut(s) | 404, 791 |
| BstBI | TTCGAA | 1 cut(s) | 26 |
| BstC8I | GCNNGC | 1 cut(s) | 136 |
| BstDEI | CTNAG | 1 cut(s) | 213 |
| BstDSI | CCRYGG | 1 cut(s) | 90 |
| BstEII | GGTNACC | 1 cut(s) | 373 |
| BstF5I | GGATG | 4 cut(s) | 373, 631, 721, 746 |
| BstKTI | GATC | 4 cut(s) | 506, 601, 725, 748 |
| BstMAI | GTCTC | 2 cut(s) | 116, 186 |
| BstMBI | GATC | 4 cut(s) | 503, 598, 722, 745 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 353, 437, 446, 818, 824 |
| BstNI | CCWGG | 2 cut(s) | 32, 379 |
| BstNSI | RCATGY | 1 cut(s) | 589 |
| BstPI | GGTNACC | 1 cut(s) | 373 |
| BstSCI | CCNGG | 4 cut(s) | 30, 330, 377, 532 |
| BstSFI | CTRYAG | 2 cut(s) | 539, 819 |
| BstSLI | GKGCMC | 1 cut(s) | 173 |
| BstV1I | GCAGC | 3 cut(s) | 340, 412, 805 |
| BstX2I | RGATCY | 1 cut(s) | 503 |
| BstYI | RGATCY | 1 cut(s) | 503 |
| BsuRI | GGCC | 4 cut(s) | 171, 298, 440, 663 |
| BtgI | CCRYGG | 1 cut(s) | 90 |
| BtsCI | GGATG | 4 cut(s) | 373, 631, 721, 746 |
| BtsI | GCAGTG | 1 cut(s) | 596 |
| BtsIMutI | CAGTG | 2 cut(s) | 596, 704 |
| Cac8I | GCNNGC | 1 cut(s) | 136 |
| CaiI | CAGNNNCTG | 1 cut(s) | 403 |
| Cfr10I | RCCGGY | 2 cut(s) | 65, 523 |
| Cfr13I | GGNCC | 2 cut(s) | 169, 170 |
| CsiI | ACCWGGT | 1 cut(s) | 377 |
| Csp6I | GTAC | 2 cut(s) | 328, 561 |
| CspAI | ACCGGT | 1 cut(s) | 65 |
| CviAII | CATG | 6 cut(s) | 61, 91, 203, 553, 579, 586 |
| CviQI | GTAC | 2 cut(s) | 328, 561 |
| DdeI | CTNAG | 1 cut(s) | 213 |
| DpnI | GATC | 4 cut(s) | 505, 600, 724, 747 |
| DpnII | GATC | 4 cut(s) | 503, 598, 722, 745 |
| EaeI | YGGCCR | 1 cut(s) | 661 |
| Eam1104I | CTCTTC | 2 cut(s) | 404, 791 |
| EarI | CTCTTC | 2 cut(s) | 404, 791 |
| Eco130I | CCWWGG | 2 cut(s) | 90, 664 |
| Eco147I | AGGCCT | 1 cut(s) | 298 |
| Eco24I | GRGCYC | 2 cut(s) | 173, 814 |
| Eco57I | CTGAAG | 1 cut(s) | 680 |
| Eco88I | CYCGRG | 3 cut(s) | 166, 348, 813 |
| Eco91I | GGTNACC | 1 cut(s) | 373 |
| EcoO109I | RGGNCCY | 1 cut(s) | 170 |
| EcoO65I | GGTNACC | 1 cut(s) | 373 |
| EcoRII | CCWGG | 2 cut(s) | 30, 377 |
| EcoT14I | CCWWGG | 2 cut(s) | 90, 664 |
| EcoT38I | GRGCYC | 2 cut(s) | 173, 814 |
| ErhI | CCWWGG | 2 cut(s) | 90, 664 |
| Esp3I | CGTCTC | 1 cut(s) | 186 |
| FaeI | CATG | 6 cut(s) | 64, 94, 206, 556, 582, 589 |
| FaiI | YATR | 8 cut(s) | 62, 92, 186, 204, 554, 567, 580, 587 |
| FatI | CATG | 6 cut(s) | 60, 90, 202, 552, 578, 585 |
| FbaI | TGATCA | 1 cut(s) | 598 |
| Fnu4HI | GCNGC | 5 cut(s) | 354, 401, 819, 822, 825 |
| FokI | GGATG | 4 cut(s) | 380, 638, 728, 753 |
| FriOI | GRGCYC | 2 cut(s) | 173, 814 |
| Fsp4HI | GCNGC | 5 cut(s) | 354, 401, 819, 822, 825 |
| GluI | GCNGC | 5 cut(s) | 354, 401, 819, 822, 825 |
| HaeIII | GGCC | 4 cut(s) | 171, 298, 440, 663 |
| HapII | CCGG | 4 cut(s) | 66, 331, 524, 533 |
| Hin1II | CATG | 6 cut(s) | 64, 94, 206, 556, 582, 589 |
| HinfI | GANTC | 9 cut(s) | 52, 176, 269, 394, 529, 544, 574, 691, 767 |
| HpaII | CCGG | 4 cut(s) | 66, 331, 524, 533 |
| HphI | GGTGA | 3 cut(s) | 80, 119, 538 |
| Hpy166II | GTNNAC | 2 cut(s) | 208, 472 |
| Hpy188I | TCNGA | 3 cut(s) | 78, 426, 519 |
| Hpy188III | TCNNGA | 3 cut(s) | 311, 713, 738 |
| Hpy8I | GTNNAC | 2 cut(s) | 208, 472 |
| Hpy99I | CGWCG | 1 cut(s) | 11 |
| HpyAV | CCTTC | 4 cut(s) | 337, 477, 485, 623 |
| HpyCH4IV | ACGT | 1 cut(s) | 637 |
| HpyCH4V | TGCA | 9 cut(s) | 138, 156, 198, 418, 431, 541, 589, 594, 821 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 353, 437, 446, 818, 824 |
| HpyF3I | CTNAG | 1 cut(s) | 213 |
| HpySE526I | ACGT | 1 cut(s) | 637 |
| Hsp92II | CATG | 6 cut(s) | 64, 94, 206, 556, 582, 589 |
| Ksp22I | TGATCA | 1 cut(s) | 598 |
| Kzo9I | GATC | 4 cut(s) | 503, 598, 722, 745 |
| LmnI | GCTCC | 2 cut(s) | 34, 92 |
| Lsp1109I | GCAGC | 3 cut(s) | 340, 412, 805 |
| MabI | ACCWGGT | 1 cut(s) | 377 |
| MaeII | ACGT | 1 cut(s) | 637 |
| MaeIII | GTNAC | 4 cut(s) | 107, 373, 545, 581 |
| MalI | GATC | 4 cut(s) | 505, 600, 724, 747 |
| MbiI | CCGCTC | 1 cut(s) | 558 |
| MboI | GATC | 4 cut(s) | 503, 598, 722, 745 |
| MboII | GAAGA | 7 cut(s) | 106, 292, 349, 352, 421, 686, 808 |
| MflI | RGATCY | 1 cut(s) | 503 |
| MhlI | GDGCHC | 2 cut(s) | 173, 814 |
| MlsI | TGGCCA | 1 cut(s) | 663 |
| MluCI | AATT | 4 cut(s) | 20, 498, 683, 829 |
| MluNI | TGGCCA | 1 cut(s) | 663 |
| MlyI | GAGTC | 3 cut(s) | 170, 278, 553 |
| MmeI | TCCRAC | 1 cut(s) | 342 |
| Mox20I | TGGCCA | 1 cut(s) | 663 |
| MroXI | GAANNNNTTC | 2 cut(s) | 101, 318 |
| MscI | TGGCCA | 1 cut(s) | 663 |
| Msp20I | TGGCCA | 1 cut(s) | 663 |
| MspA1I | CMGCKG | 1 cut(s) | 403 |
| MspI | CCGG | 4 cut(s) | 66, 331, 524, 533 |
| MspR9I | CCNGG | 4 cut(s) | 32, 332, 379, 534 |
| Mva1269I | GAATGC | 1 cut(s) | 198 |
| MvaI | CCWGG | 2 cut(s) | 32, 379 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 353, 437, 446, 818, 824 |
| NciI | CCSGG | 2 cut(s) | 332, 534 |
| NcoI | CCATGG | 1 cut(s) | 90 |
| NdeII | GATC | 4 cut(s) | 503, 598, 722, 745 |
| NlaIII | CATG | 6 cut(s) | 64, 94, 206, 556, 582, 589 |
| NlaIV | GGNNCC | 1 cut(s) | 171 |
| NmeAIII | GCCGAG | 2 cut(s) | 292, 466 |
| NmuCI | GTSAC | 2 cut(s) | 107, 545 |
| NspI | RCATGY | 1 cut(s) | 589 |
| NspV | TTCGAA | 1 cut(s) | 26 |
| PaeR7I | CTCGAG | 2 cut(s) | 348, 813 |
| PceI | AGGCCT | 1 cut(s) | 298 |
| PctI | GAATGC | 1 cut(s) | 198 |
| PdmI | GAANNNNTTC | 2 cut(s) | 101, 318 |
| PfeI | GAWTC | 6 cut(s) | 52, 394, 529, 574, 691, 767 |
| PinAI | ACCGGT | 1 cut(s) | 65 |
| PkrI | GCNGC | 5 cut(s) | 355, 402, 820, 823, 826 |
| PleI | GAGTC | 3 cut(s) | 170, 277, 552 |
| PpsI | GAGTC | 3 cut(s) | 170, 277, 552 |
| Psp6I | CCWGG | 2 cut(s) | 30, 377 |
| PspEI | GGTNACC | 1 cut(s) | 373 |
| PspGI | CCWGG | 2 cut(s) | 30, 377 |
| PspN4I | GGNNCC | 1 cut(s) | 171 |
| PspOMI | GGGCCC | 1 cut(s) | 169 |
| PspPI | GGNCC | 2 cut(s) | 169, 170 |
| PspXI | VCTCGAGB | 2 cut(s) | 348, 813 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 244, 276 |
| PstI | CTGCAG | 2 cut(s) | 543, 823 |
| PstNI | CAGNNNCTG | 1 cut(s) | 403 |
| PsuI | RGATCY | 1 cut(s) | 503 |
| PvuII | CAGCTG | 1 cut(s) | 403 |
| RsaI | GTAC | 2 cut(s) | 329, 562 |
| RsaNI | GTAC | 2 cut(s) | 328, 561 |
| SatI | GCNGC | 5 cut(s) | 354, 401, 819, 822, 825 |
| Sau3AI | GATC | 4 cut(s) | 503, 598, 722, 745 |
| Sau96I | GGNCC | 2 cut(s) | 169, 170 |
| SchI | GAGTC | 3 cut(s) | 170, 278, 553 |
| ScrFI | CCNGG | 4 cut(s) | 32, 332, 379, 534 |
| SduI | GDGCHC | 2 cut(s) | 173, 814 |
| SexAI | ACCWGGT | 1 cut(s) | 377 |
| SfcI | CTRYAG | 2 cut(s) | 539, 819 |
| Sfr274I | CTCGAG | 2 cut(s) | 348, 813 |
| SfuI | TTCGAA | 1 cut(s) | 26 |
| SlaI | CTCGAG | 2 cut(s) | 348, 813 |
| SmlI | CTYRAG | 3 cut(s) | 348, 455, 813 |
| SmoI | CTYRAG | 3 cut(s) | 348, 455, 813 |
| Sse9I | AATT | 4 cut(s) | 20, 498, 683, 829 |
| SseBI | AGGCCT | 1 cut(s) | 298 |
| SsiI | CCGC | 1 cut(s) | 558 |
| SspI | AATATT | 1 cut(s) | 100 |
| StuI | AGGCCT | 1 cut(s) | 298 |
| StyD4I | CCNGG | 4 cut(s) | 30, 330, 377, 532 |
| StyI | CCWWGG | 2 cut(s) | 90, 664 |
| TaiI | ACGT | 1 cut(s) | 640 |
| TaqI | TCGA | 4 cut(s) | 26, 50, 349, 814 |
| TasI | AATT | 4 cut(s) | 20, 498, 683, 829 |
| TfiI | GAWTC | 6 cut(s) | 52, 394, 529, 574, 691, 767 |
| TscAI | CASTG | 2 cut(s) | 596, 704 |
| TseFI | GTSAC | 2 cut(s) | 107, 545 |
| TseI | GCWGC | 5 cut(s) | 353, 400, 818, 821, 824 |
| Tsp45I | GTSAC | 2 cut(s) | 107, 545 |
| TspDTI | ATGAA | 4 cut(s) | 191, 422, 587, 671 |
| TspGWI | ACGGA | 2 cut(s) | 24, 501 |
| TspRI | CASTG | 2 cut(s) | 596, 704 |
| XapI | RAATTY | 2 cut(s) | 20, 683 |
| XceI | RCATGY | 1 cut(s) | 589 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 671 |
| XhoI | CTCGAG | 2 cut(s) | 348, 813 |
| XmnI | GAANNNNTTC | 2 cut(s) | 101, 318 |