TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 215 |
| AgsI | TTSAA | 3 cut(s) | 210, 220, 308 |
| AluBI | AGCT | 6 cut(s) | 16, 47, 122, 186, 258, 316 |
| AluI | AGCT | 6 cut(s) | 16, 47, 122, 186, 258, 316 |
| AoxI | GGCC | 1 cut(s) | 150 |
| ApeKI | GCWGC | 4 cut(s) | 122, 125, 313, 316 |
| BaeGI | GKGCMC | 1 cut(s) | 74 |
| BbvI | GCAGC | 3 cut(s) | 109, 137, 303 |
| BclI | TGATCA | 1 cut(s) | 7 |
| BfaI | CTAG | 2 cut(s) | 51, 104 |
| BfmI | CTRYAG | 1 cut(s) | 123 |
| BisI | GCNGC | 4 cut(s) | 123, 126, 314, 317 |
| BlsI | GCNGC | 4 cut(s) | 124, 127, 315, 318 |
| BmcAI | AGTACT | 1 cut(s) | 215 |
| BmsI | GCATC | 3 cut(s) | 46, 98, 125 |
| BpmI | CTGGAG | 1 cut(s) | 132 |
| BseSI | GKGCMC | 1 cut(s) | 74 |
| BseXI | GCAGC | 3 cut(s) | 109, 137, 303 |
| BshFI | GGCC | 1 cut(s) | 152 |
| BsnI | GGCC | 1 cut(s) | 152 |
| Bsp1286I | GDGCHC | 1 cut(s) | 74 |
| Bsp143I | GATC | 1 cut(s) | 7 |
| BspANI | GGCC | 1 cut(s) | 152 |
| BspHI | TCATGA | 1 cut(s) | 10 |
| BspMAI | CTGCAG | 1 cut(s) | 127 |
| BssMI | GATC | 1 cut(s) | 7 |
| Bst6I | CTCTTC | 1 cut(s) | 20 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 122 |
| BstKTI | GATC | 1 cut(s) | 10 |
| BstMBI | GATC | 1 cut(s) | 7 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 122 |
| BstSFI | CTRYAG | 1 cut(s) | 123 |
| BstSLI | GKGCMC | 1 cut(s) | 74 |
| BstV1I | GCAGC | 3 cut(s) | 109, 137, 303 |
| BsuRI | GGCC | 1 cut(s) | 152 |
| BtsIMutI | CAGTG | 1 cut(s) | 177 |
| CciI | TCATGA | 1 cut(s) | 10 |
| Csp6I | GTAC | 1 cut(s) | 214 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 48, 63, 83, 98 |
| CviAII | CATG | 1 cut(s) | 11 |
| CviQI | GTAC | 1 cut(s) | 214 |
| DpnI | GATC | 1 cut(s) | 9 |
| DpnII | GATC | 1 cut(s) | 7 |
| DraI | TTTAAA | 1 cut(s) | 241 |
| Eam1104I | CTCTTC | 1 cut(s) | 20 |
| EarI | CTCTTC | 1 cut(s) | 20 |
| FaeI | CATG | 1 cut(s) | 14 |
| FaiI | YATR | 3 cut(s) | 12, 158, 173 |
| FatI | CATG | 1 cut(s) | 10 |
| FbaI | TGATCA | 1 cut(s) | 7 |
| Fnu4HI | GCNGC | 4 cut(s) | 123, 126, 314, 317 |
| Fsp4HI | GCNGC | 4 cut(s) | 123, 126, 314, 317 |
| FspBI | CTAG | 2 cut(s) | 51, 104 |
| GluI | GCNGC | 4 cut(s) | 123, 126, 314, 317 |
| GsuI | CTGGAG | 1 cut(s) | 132 |
| HaeIII | GGCC | 1 cut(s) | 152 |
| Hin1II | CATG | 1 cut(s) | 14 |
| HindIII | AAGCTT | 2 cut(s) | 184, 256 |
| HinfI | GANTC | 3 cut(s) | 19, 31, 200 |
| Hpy188I | TCNGA | 2 cut(s) | 24, 94 |
| Hpy188III | TCNNGA | 1 cut(s) | 11 |
| HpyAV | CCTTC | 2 cut(s) | 142, 258 |
| HpyCH4V | TGCA | 3 cut(s) | 59, 125, 233 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 122 |
| Hsp92II | CATG | 1 cut(s) | 14 |
| Ksp22I | TGATCA | 1 cut(s) | 7 |
| Kzo9I | GATC | 1 cut(s) | 7 |
| LmnI | GCTCC | 2 cut(s) | 52, 113 |
| LpnPI | CCDG | 1 cut(s) | 96 |
| Lsp1109I | GCAGC | 3 cut(s) | 109, 137, 303 |
| LweI | GCATC | 3 cut(s) | 46, 98, 125 |
| MaeI | CTAG | 2 cut(s) | 51, 104 |
| MalI | GATC | 1 cut(s) | 9 |
| MboI | GATC | 1 cut(s) | 7 |
| MboII | GAAGA | 2 cut(s) | 37, 184 |
| MhlI | GDGCHC | 1 cut(s) | 74 |
| MluCI | AATT | 2 cut(s) | 291, 297 |
| MlyI | GAGTC | 2 cut(s) | 25, 194 |
| MnlI | CCTC | 4 cut(s) | 21, 72, 245, 267 |
| MseI | TTAA | 1 cut(s) | 240 |
| MspA1I | CMGCKG | 2 cut(s) | 122, 316 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 122 |
| NdeII | GATC | 1 cut(s) | 7 |
| NlaIII | CATG | 1 cut(s) | 14 |
| PagI | TCATGA | 1 cut(s) | 10 |
| PfeI | GAWTC | 1 cut(s) | 19 |
| PkrI | GCNGC | 4 cut(s) | 124, 127, 315, 318 |
| PleI | GAGTC | 2 cut(s) | 25, 194 |
| PpsI | GAGTC | 2 cut(s) | 25, 194 |
| PstI | CTGCAG | 1 cut(s) | 127 |
| PvuII | CAGCTG | 2 cut(s) | 122, 316 |
| RsaI | GTAC | 1 cut(s) | 215 |
| RsaNI | GTAC | 1 cut(s) | 214 |
| SaqAI | TTAA | 1 cut(s) | 240 |
| SatI | GCNGC | 4 cut(s) | 123, 126, 314, 317 |
| Sau3AI | GATC | 1 cut(s) | 7 |
| ScaI | AGTACT | 1 cut(s) | 215 |
| SchI | GAGTC | 2 cut(s) | 25, 194 |
| SduI | GDGCHC | 1 cut(s) | 74 |
| SetI | ASST | 8 cut(s) | 18, 49, 109, 124, 134, 188, 260, 318 |
| SfaNI | GCATC | 3 cut(s) | 46, 98, 125 |
| SfcI | CTRYAG | 1 cut(s) | 123 |
| SgeI | CNNG | 9 cut(s) | 23, 63, 116, 123, 155, 160, 229, 239, 290 |
| Sse9I | AATT | 2 cut(s) | 291, 297 |
| SspMI | CTAG | 2 cut(s) | 51, 104 |
| TasI | AATT | 2 cut(s) | 291, 297 |
| TatI | WGTACW | 1 cut(s) | 213 |
| TfiI | GAWTC | 1 cut(s) | 19 |
| Tru1I | TTAA | 1 cut(s) | 240 |
| Tru9I | TTAA | 1 cut(s) | 240 |
| TscAI | CASTG | 1 cut(s) | 184 |
| TseI | GCWGC | 4 cut(s) | 122, 125, 313, 316 |
| TspDTI | ATGAA | 3 cut(s) | 178, 184, 260 |
| TspRI | CASTG | 1 cut(s) | 184 |
| XspI | CTAG | 2 cut(s) | 51, 104 |
| ZrmI | AGTACT | 1 cut(s) | 215 |