TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 124 |
| AcuI | CTGAAG | 2 cut(s) | 166, 366 |
| AfaI | GTAC | 2 cut(s) | 149, 390 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 115, 294 |
| AgsI | TTSAA | 2 cut(s) | 258, 326 |
| AluBI | AGCT | 4 cut(s) | 196, 226, 359, 473 |
| AluI | AGCT | 4 cut(s) | 196, 226, 359, 473 |
| Alw21I | GWGCWC | 1 cut(s) | 228 |
| AoxI | GGCC | 1 cut(s) | 343 |
| ApeKI | GCWGC | 4 cut(s) | 23, 26, 470, 485 |
| AspLEI | GCGC | 1 cut(s) | 126 |
| AsuHPI | GGTGA | 2 cut(s) | 62, 425 |
| BanII | GRGCYC | 1 cut(s) | 228 |
| BbsI | GAAGAC | 3 cut(s) | 88, 216, 259 |
| Bbv12I | GWGCWC | 1 cut(s) | 228 |
| BbvI | GCAGC | 4 cut(s) | 35, 38, 482, 497 |
| BccI | CCATC | 1 cut(s) | 495 |
| BciVI | GTATCC | 1 cut(s) | 112 |
| BclI | TGATCA | 3 cut(s) | 12, 67, 433 |
| BfuI | GTATCC | 1 cut(s) | 112 |
| BisI | GCNGC | 4 cut(s) | 24, 27, 471, 486 |
| BlpI | GCTNAGC | 1 cut(s) | 197 |
| BlsI | GCNGC | 4 cut(s) | 25, 28, 472, 487 |
| BmiI | GGNNCC | 1 cut(s) | 378 |
| BpiI | GAAGAC | 3 cut(s) | 88, 216, 259 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 197 |
| BpuEI | CTTGAG | 2 cut(s) | 274, 461 |
| BsaJI | CCNNGG | 1 cut(s) | 109 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 210, 240 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 115, 294 |
| Bse1I | ACTGG | 2 cut(s) | 30, 315 |
| BseDI | CCNNGG | 1 cut(s) | 109 |
| BseGI | GGATG | 1 cut(s) | 506 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 115, 294 |
| BseMII | CTCAG | 2 cut(s) | 92, 155 |
| BseNI | ACTGG | 2 cut(s) | 30, 315 |
| BseRI | GAGGAG | 2 cut(s) | 218, 219 |
| BseXI | GCAGC | 4 cut(s) | 35, 38, 482, 497 |
| Bsh1236I | CGCG | 1 cut(s) | 124 |
| BshFI | GGCC | 1 cut(s) | 345 |
| BsiHKAI | GWGCWC | 1 cut(s) | 228 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 115, 294 |
| BsmI | GAATGC | 1 cut(s) | 332 |
| BsnI | GGCC | 1 cut(s) | 345 |
| Bsp1286I | GDGCHC | 1 cut(s) | 228 |
| Bsp1407I | TGTACA | 1 cut(s) | 147 |
| Bsp143I | GATC | 4 cut(s) | 12, 67, 139, 433 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 197 |
| BspANI | GGCC | 1 cut(s) | 345 |
| BspCNI | CTCAG | 2 cut(s) | 93, 156 |
| BspFNI | CGCG | 1 cut(s) | 124 |
| BspLI | GGNNCC | 1 cut(s) | 378 |
| BsrGI | TGTACA | 1 cut(s) | 147 |
| BsrI | ACTGG | 2 cut(s) | 30, 315 |
| BssECI | CCNNGG | 1 cut(s) | 109 |
| BssMI | GATC | 4 cut(s) | 12, 67, 139, 433 |
| BstAUI | TGTACA | 1 cut(s) | 147 |
| BstDEI | CTNAG | 4 cut(s) | 101, 164, 197, 301 |
| BstF5I | GGATG | 1 cut(s) | 506 |
| BstFNI | CGCG | 1 cut(s) | 124 |
| BstHHI | GCGC | 1 cut(s) | 126 |
| BstKTI | GATC | 4 cut(s) | 15, 70, 142, 436 |
| BstMBI | GATC | 4 cut(s) | 12, 67, 139, 433 |
| BstUI | CGCG | 1 cut(s) | 124 |
| BstV1I | GCAGC | 4 cut(s) | 35, 38, 482, 497 |
| BstV2I | GAAGAC | 3 cut(s) | 88, 216, 259 |
| BsuI | GTATCC | 1 cut(s) | 112 |
| BsuRI | GGCC | 1 cut(s) | 345 |
| BtsCI | GGATG | 1 cut(s) | 506 |
| CfoI | GCGC | 1 cut(s) | 126 |
| CseI | GACGC | 1 cut(s) | 425 |
| Csp6I | GTAC | 2 cut(s) | 148, 389 |
| CviAII | CATG | 1 cut(s) | 454 |
| CviJI | RGCY | 8 cut(s) | 5, 29, 196, 226, 345, 359, 377, 473 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 29, 196, 226, 345, 359, 377, 473 |
| CviQI | GTAC | 2 cut(s) | 148, 389 |
| DdeI | CTNAG | 4 cut(s) | 101, 164, 197, 301 |
| DpnI | GATC | 4 cut(s) | 14, 69, 141, 435 |
| DpnII | GATC | 4 cut(s) | 12, 67, 139, 433 |
| Ecl136II | GAGCTC | 1 cut(s) | 226 |
| Eco24I | GRGCYC | 1 cut(s) | 228 |
| Eco53kI | GAGCTC | 1 cut(s) | 226 |
| Eco57I | CTGAAG | 2 cut(s) | 166, 366 |
| EcoICRI | GAGCTC | 1 cut(s) | 226 |
| EcoT38I | GRGCYC | 1 cut(s) | 228 |
| FaeI | CATG | 1 cut(s) | 457 |
| FaiI | YATR | 5 cut(s) | 88, 129, 215, 282, 455 |
| FatI | CATG | 1 cut(s) | 453 |
| FbaI | TGATCA | 3 cut(s) | 12, 67, 433 |
| Fnu4HI | GCNGC | 4 cut(s) | 24, 27, 471, 486 |
| FriOI | GRGCYC | 1 cut(s) | 228 |
| Fsp4HI | GCNGC | 4 cut(s) | 24, 27, 471, 486 |
| GlaI | GCGC | 1 cut(s) | 125 |
| GluI | GCNGC | 4 cut(s) | 24, 27, 471, 486 |
| HaeIII | GGCC | 1 cut(s) | 345 |
| HgaI | GACGC | 1 cut(s) | 425 |
| HhaI | GCGC | 1 cut(s) | 126 |
| Hin1II | CATG | 1 cut(s) | 457 |
| Hin6I | GCGC | 1 cut(s) | 124 |
| HinP1I | GCGC | 1 cut(s) | 124 |
| HindIII | AAGCTT | 1 cut(s) | 194 |
| HinfI | GANTC | 2 cut(s) | 245, 335 |
| HphI | GGTGA | 2 cut(s) | 62, 425 |
| Hpy188I | TCNGA | 5 cut(s) | 12, 110, 165, 185, 385 |
| Hpy188III | TCNNGA | 4 cut(s) | 100, 249, 316, 498 |
| Hpy99I | CGWCG | 1 cut(s) | 266 |
| HpyAV | CCTTC | 3 cut(s) | 190, 390, 460 |
| HpyCH4V | TGCA | 2 cut(s) | 330, 425 |
| HpyF3I | CTNAG | 4 cut(s) | 101, 164, 197, 301 |
| Hsp92II | CATG | 1 cut(s) | 457 |
| HspAI | GCGC | 1 cut(s) | 124 |
| Ksp22I | TGATCA | 3 cut(s) | 12, 67, 433 |
| Kzo9I | GATC | 4 cut(s) | 12, 67, 139, 433 |
| LmnI | GCTCC | 2 cut(s) | 231, 382 |
| LpnPI | CCDG | 6 cut(s) | 43, 113, 262, 296, 359, 483 |
| Lsp1109I | GCAGC | 4 cut(s) | 35, 38, 482, 497 |
| MaeIII | GTNAC | 1 cut(s) | 413 |
| MalI | GATC | 4 cut(s) | 14, 69, 141, 435 |
| MboI | GATC | 4 cut(s) | 12, 67, 139, 433 |
| MboII | GAAGA | 6 cut(s) | 27, 33, 51, 88, 221, 259 |
| MfeI | CAATTG | 1 cut(s) | 237 |
| MhlI | GDGCHC | 1 cut(s) | 228 |
| MluCI | AATT | 4 cut(s) | 171, 237, 277, 437 |
| MlyI | GAGTC | 1 cut(s) | 254 |
| MnlI | CCTC | 7 cut(s) | 85, 104, 109, 159, 197, 239, 298 |
| MseI | TTAA | 1 cut(s) | 174 |
| MunI | CAATTG | 1 cut(s) | 237 |
| Mva1269I | GAATGC | 1 cut(s) | 332 |
| MvnI | CGCG | 1 cut(s) | 124 |
| NdeII | GATC | 4 cut(s) | 12, 67, 139, 433 |
| NlaIII | CATG | 1 cut(s) | 457 |
| NlaIV | GGNNCC | 1 cut(s) | 378 |
| NmuCI | GTSAC | 1 cut(s) | 413 |
| PctI | GAATGC | 1 cut(s) | 332 |
| PfeI | GAWTC | 1 cut(s) | 335 |
| PkrI | GCNGC | 4 cut(s) | 25, 28, 472, 487 |
| PleI | GAGTC | 1 cut(s) | 253 |
| PpsI | GAGTC | 1 cut(s) | 253 |
| Psp124BI | GAGCTC | 1 cut(s) | 228 |
| PspN4I | GGNNCC | 1 cut(s) | 378 |
| RsaI | GTAC | 2 cut(s) | 149, 390 |
| RsaNI | GTAC | 2 cut(s) | 148, 389 |
| SacI | GAGCTC | 1 cut(s) | 228 |
| SaqAI | TTAA | 1 cut(s) | 174 |
| SatI | GCNGC | 4 cut(s) | 24, 27, 471, 486 |
| Sau3AI | GATC | 4 cut(s) | 12, 67, 139, 433 |
| SchI | GAGTC | 1 cut(s) | 254 |
| SduI | GDGCHC | 1 cut(s) | 228 |
| SetI | ASST | 9 cut(s) | 96, 182, 198, 228, 296, 361, 375, 406, 475 |
| SmlI | CTYRAG | 2 cut(s) | 289, 476 |
| SmoI | CTYRAG | 2 cut(s) | 289, 476 |
| Sse9I | AATT | 4 cut(s) | 171, 237, 277, 437 |
| SstI | GAGCTC | 1 cut(s) | 228 |
| TasI | AATT | 4 cut(s) | 171, 237, 277, 437 |
| TatI | WGTACW | 1 cut(s) | 147 |
| TfiI | GAWTC | 1 cut(s) | 335 |
| Tru1I | TTAA | 1 cut(s) | 174 |
| Tru9I | TTAA | 1 cut(s) | 174 |
| TseFI | GTSAC | 1 cut(s) | 413 |
| TseI | GCWGC | 4 cut(s) | 23, 26, 470, 485 |
| Tsp45I | GTSAC | 1 cut(s) | 413 |
| TspDTI | ATGAA | 2 cut(s) | 27, 321 |