TMV resistance protein N-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2129 |
| Acc16I | TGCGCA | 1 cut(s) | 2366 |
| AccB1I | GGYRCC | 1 cut(s) | 874 |
| AccBSI | CCGCTC | 1 cut(s) | 3065 |
| AccI | GTMKAC | 3 cut(s) | 655, 1074, 1398 |
| AccII | CGCG | 2 cut(s) | 145, 543 |
| AccIII | TCCGGA | 1 cut(s) | 2872 |
| AciI | CCGC | 7 cut(s) | 174, 766, 1678, 1906, 2969, 3058, 3065 |
| AclI | AACGTT | 3 cut(s) | 1042, 2106, 2889 |
| AclWI | GGATC | 7 cut(s) | 392, 405, 546, 2040, 2250, 2493, 2532 |
| AdeI | CACNNNGTG | 2 cut(s) | 1178, 1577 |
| AfaI | GTAC | 3 cut(s) | 411, 2047, 2846 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1784, 3064 |
| AflIII | ACRYGT | 2 cut(s) | 696, 1955 |
| AgeI | ACCGGT | 1 cut(s) | 379 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 662 |
| AhlI | ACTAGT | 1 cut(s) | 2617 |
| AjiI | CACGTC | 2 cut(s) | 952, 1618 |
| AjnI | CCWGG | 7 cut(s) | 715, 1006, 1573, 1582, 1668, 2048, 2950 |
| Alw21I | GWGCWC | 1 cut(s) | 219 |
| Alw26I | GTCTC | 5 cut(s) | 827, 852, 1782, 1924, 2440 |
| AlwI | GGATC | 7 cut(s) | 392, 405, 546, 2040, 2250, 2493, 2532 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1675 |
| Aor13HI | TCCGGA | 1 cut(s) | 2872 |
| AoxI | GGCC | 6 cut(s) | 527, 713, 1004, 1198, 1432, 1473 |
| ApeKI | GCWGC | 6 cut(s) | 47, 50, 494, 509, 2535, 2562 |
| AseI | ATTAAT | 2 cut(s) | 560, 2759 |
| AsiGI | ACCGGT | 1 cut(s) | 379 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1359 |
| AspLEI | GCGC | 2 cut(s) | 147, 2367 |
| AspS9I | GGNCC | 5 cut(s) | 713, 1145, 1289, 1621, 1672 |
| AsuHPI | GGTGA | 6 cut(s) | 146, 231, 446, 1400, 1563, 1589 |
| AvaII | GGWCC | 4 cut(s) | 1145, 1289, 1621, 1672 |
| BaeGI | GKGCMC | 1 cut(s) | 879 |
| BamHI | GGATCC | 1 cut(s) | 397 |
| BanI | GGYRCC | 1 cut(s) | 874 |
| BanII | GRGCYC | 1 cut(s) | 219 |
| BauI | CACGAG | 1 cut(s) | 2732 |
| BbsI | GAAGAC | 2 cut(s) | 280, 1620 |
| Bbv12I | GWGCWC | 1 cut(s) | 219 |
| BbvI | GCAGC | 6 cut(s) | 59, 62, 506, 521, 2522, 2574 |
| BccI | CCATC | 6 cut(s) | 519, 994, 1864, 2428, 2651, 3082 |
| BceAI | ACGGC | 3 cut(s) | 1447, 2329, 2962 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 3090 |
| BciT130I | CCWGG | 7 cut(s) | 717, 1008, 1575, 1584, 1670, 2050, 2952 |
| BciVI | GTATCC | 1 cut(s) | 133 |
| BclI | TGATCA | 1 cut(s) | 454 |
| BcoDI | GTCTC | 5 cut(s) | 827, 852, 1782, 1924, 2440 |
| BcuI | ACTAGT | 1 cut(s) | 2617 |
| BfaI | CTAG | 5 cut(s) | 963, 1418, 2300, 2618, 2631 |
| BfmI | CTRYAG | 4 cut(s) | 1591, 2160, 2315, 2684 |
| BfuI | GTATCC | 1 cut(s) | 133 |
| BisI | GCNGC | 8 cut(s) | 48, 51, 495, 510, 1679, 1906, 2536, 2563 |
| BlsI | GCNGC | 8 cut(s) | 49, 52, 496, 511, 1680, 1907, 2537, 2564 |
| Bme1390I | CCNGG | 7 cut(s) | 717, 1008, 1575, 1584, 1670, 2050, 2952 |
| Bme18I | GGWCC | 4 cut(s) | 1145, 1289, 1621, 1672 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 662 |
| BmgBI | CACGTC | 2 cut(s) | 952, 1618 |
| BmgT120I | GGNCC | 5 cut(s) | 713, 1145, 1289, 1621, 1672 |
| BmiI | GGNNCC | 4 cut(s) | 399, 714, 876, 2064 |
| BmrFI | CCNGG | 7 cut(s) | 717, 1008, 1575, 1584, 1670, 2050, 2952 |
| BpiI | GAAGAC | 2 cut(s) | 280, 1620 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2918, 2950 |
| BpmI | CTGGAG | 2 cut(s) | 1806, 2942 |
| BpuEI | CTTGAG | 3 cut(s) | 2213, 2251, 2464 |
| BsaJI | CCNNGG | 4 cut(s) | 402, 549, 1195, 2074 |
| BsaWI | WCCGGW | 2 cut(s) | 379, 2872 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1495, 1525, 2963, 2993 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1784, 3064 |
| Bse118I | RCCGGY | 2 cut(s) | 241, 379 |
| Bse1I | ACTGG | 3 cut(s) | 54, 1810, 2925 |
| BseAI | TCCGGA | 1 cut(s) | 2872 |
| BseBI | CCWGG | 7 cut(s) | 717, 1008, 1575, 1584, 1670, 2050, 2952 |
| BseDI | CCNNGG | 4 cut(s) | 402, 549, 1195, 2074 |
| BseGI | GGATG | 9 cut(s) | 412, 530, 631, 754, 986, 1527, 1665, 2272, 2711 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1784, 3064 |
| BseMII | CTCAG | 4 cut(s) | 113, 232, 1307, 2625 |
| BseNI | ACTGG | 3 cut(s) | 54, 1810, 2925 |
| BseRI | GAGGAG | 5 cut(s) | 240, 278, 701, 1268, 2939 |
| BseSI | GKGCMC | 1 cut(s) | 879 |
| BseXI | GCAGC | 6 cut(s) | 59, 62, 506, 521, 2522, 2574 |
| BseYI | CCCAGC | 1 cut(s) | 2748 |
| BsgI | GTGCAG | 1 cut(s) | 2581 |
| Bsh1236I | CGCG | 2 cut(s) | 145, 543 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1850 |
| BshFI | GGCC | 6 cut(s) | 529, 715, 1006, 1200, 1434, 1475 |
| BshNI | GGYRCC | 1 cut(s) | 874 |
| BshTI | ACCGGT | 1 cut(s) | 379 |
| BsiEI | CGRYCG | 1 cut(s) | 1850 |
| BsiHKAI | GWGCWC | 1 cut(s) | 219 |
| BsiSI | CCGG | 3 cut(s) | 242, 380, 2873 |
| BslFI | GGGAC | 1 cut(s) | 2871 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1784, 3064 |
| BsmAI | GTCTC | 5 cut(s) | 827, 852, 1782, 1924, 2440 |
| BsmBI | CGTCTC | 1 cut(s) | 1924 |
| BsmFI | GGGAC | 1 cut(s) | 2871 |
| BsmI | GAATGC | 2 cut(s) | 353, 1130 |
| BsnI | GGCC | 6 cut(s) | 529, 715, 1006, 1200, 1434, 1475 |
| Bsp1286I | GDGCHC | 2 cut(s) | 219, 879 |
| Bsp13I | TCCGGA | 1 cut(s) | 2872 |
| Bsp68I | TCGCGA | 1 cut(s) | 543 |
| BspACI | CCGC | 7 cut(s) | 174, 766, 1678, 1906, 2969, 3058, 3065 |
| BspANI | GGCC | 6 cut(s) | 529, 715, 1006, 1200, 1434, 1475 |
| BspCNI | CTCAG | 4 cut(s) | 114, 231, 1306, 2624 |
| BspEI | TCCGGA | 1 cut(s) | 2872 |
| BspFNI | CGCG | 2 cut(s) | 145, 543 |
| BspHI | TCATGA | 1 cut(s) | 1057 |
| BspLI | GGNNCC | 4 cut(s) | 399, 714, 876, 2064 |
| BspMAI | CTGCAG | 1 cut(s) | 2164 |
| BspPI | GGATC | 7 cut(s) | 392, 405, 546, 2040, 2250, 2493, 2532 |
| BspQI | GCTCTTC | 1 cut(s) | 252 |
| BspT107I | GGYRCC | 1 cut(s) | 874 |
| BsrBI | CCGCTC | 1 cut(s) | 3065 |
| BsrFI | RCCGGY | 2 cut(s) | 241, 379 |
| BsrI | ACTGG | 3 cut(s) | 54, 1810, 2925 |
| BssAI | RCCGGY | 2 cut(s) | 241, 379 |
| BssECI | CCNNGG | 4 cut(s) | 402, 549, 1195, 2074 |
| BssNAI | GTATAC | 1 cut(s) | 1075 |
| BssSI | CACGAG | 1 cut(s) | 2732 |
| BssT1I | CCWWGG | 1 cut(s) | 1195 |
| Bst1107I | GTATAC | 1 cut(s) | 1075 |
| Bst2BI | CACGAG | 1 cut(s) | 2732 |
| Bst2UI | CCWGG | 7 cut(s) | 717, 1008, 1575, 1584, 1670, 2050, 2952 |
| Bst4CI | ACNGT | 8 cut(s) | 1403, 1592, 1657, 1838, 2170, 2324, 2559, 2849 |
| Bst6I | CTCTTC | 6 cut(s) | 78, 217, 252, 1601, 2298, 2997 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1178 |
| BstC8I | GCNNGC | 6 cut(s) | 17, 1124, 1128, 1375, 1426, 2806 |
| BstF5I | GGATG | 9 cut(s) | 412, 530, 631, 754, 986, 1527, 1665, 2272, 2711 |
| BstFNI | CGCG | 2 cut(s) | 145, 543 |
| BstHHI | GCGC | 2 cut(s) | 147, 2367 |
| BstMAI | GTCTC | 5 cut(s) | 827, 852, 1782, 1924, 2440 |
| BstMCI | CGRYCG | 1 cut(s) | 1850 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 963, 1178, 1340, 1828, 2689 |
| BstNI | CCWGG | 7 cut(s) | 717, 1008, 1575, 1584, 1670, 2050, 2952 |
| BstNSI | RCATGY | 3 cut(s) | 700, 1130, 1959 |
| BstSCI | CCNGG | 7 cut(s) | 715, 1006, 1573, 1582, 1668, 2048, 2950 |
| BstSFI | CTRYAG | 4 cut(s) | 1591, 2160, 2315, 2684 |
| BstSLI | GKGCMC | 1 cut(s) | 879 |
| BstUI | CGCG | 2 cut(s) | 145, 543 |
| BstV1I | GCAGC | 6 cut(s) | 59, 62, 506, 521, 2522, 2574 |
| BstV2I | GAAGAC | 2 cut(s) | 280, 1620 |
| BstX2I | RGATCY | 4 cut(s) | 397, 2032, 2242, 2524 |
| BstYI | RGATCY | 4 cut(s) | 397, 2032, 2242, 2524 |
| BstZ17I | GTATAC | 1 cut(s) | 1075 |
| BsuI | GTATCC | 1 cut(s) | 133 |
| BsuRI | GGCC | 6 cut(s) | 529, 715, 1006, 1200, 1434, 1475 |
| BtrI | CACGTC | 2 cut(s) | 952, 1618 |
| BtsCI | GGATG | 9 cut(s) | 412, 530, 631, 754, 986, 1527, 1665, 2272, 2711 |
| BtsI | GCAGTG | 2 cut(s) | 2113, 2473 |
| BtsIMutI | CAGTG | 4 cut(s) | 1449, 2113, 2473, 3090 |
| BtuMI | TCGCGA | 1 cut(s) | 543 |
| Cac8I | GCNNGC | 6 cut(s) | 17, 1124, 1128, 1375, 1426, 2806 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1675 |
| CciI | TCATGA | 1 cut(s) | 1057 |
| CfoI | GCGC | 2 cut(s) | 147, 2367 |
| Cfr10I | RCCGGY | 2 cut(s) | 241, 379 |
| Cfr13I | GGNCC | 5 cut(s) | 713, 1145, 1289, 1621, 1672 |
| CseI | GACGC | 3 cut(s) | 446, 2599, 2698 |
| CsiI | ACCWGGT | 2 cut(s) | 1573, 2048 |
| Csp6I | GTAC | 3 cut(s) | 410, 2046, 2845 |
| CspAI | ACCGGT | 1 cut(s) | 379 |
| CviQI | GTAC | 3 cut(s) | 410, 2046, 2845 |
| DraI | TTTAAA | 3 cut(s) | 1350, 1384, 2155 |
| DraIII | CACNNNGTG | 2 cut(s) | 1178, 1577 |
| DriI | GACNNNNNGTC | 1 cut(s) | 662 |
| Eam1104I | CTCTTC | 6 cut(s) | 78, 217, 252, 1601, 2298, 2997 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 662 |
| EarI | CTCTTC | 6 cut(s) | 78, 217, 252, 1601, 2298, 2997 |
| EciI | GGCGGA | 2 cut(s) | 755, 2984 |
| Ecl136II | GAGCTC | 1 cut(s) | 217 |
| Eco130I | CCWWGG | 1 cut(s) | 1195 |
| Eco147I | AGGCCT | 2 cut(s) | 1200, 1475 |
| Eco24I | GRGCYC | 1 cut(s) | 219 |
| Eco32I | GATATC | 1 cut(s) | 1369 |
| Eco47I | GGWCC | 4 cut(s) | 1145, 1289, 1621, 1672 |
| Eco53kI | GAGCTC | 1 cut(s) | 217 |
| EcoICRI | GAGCTC | 1 cut(s) | 217 |
| EcoO109I | RGGNCCY | 3 cut(s) | 713, 1289, 1672 |
| EcoRI | GAATTC | 1 cut(s) | 1017 |
| EcoRII | CCWGG | 7 cut(s) | 715, 1006, 1573, 1582, 1668, 2048, 2950 |
| EcoRV | GATATC | 1 cut(s) | 1369 |
| EcoT14I | CCWWGG | 1 cut(s) | 1195 |
| EcoT22I | ATGCAT | 3 cut(s) | 1132, 1527, 3113 |
| EcoT38I | GRGCYC | 1 cut(s) | 219 |
| ErhI | CCWWGG | 1 cut(s) | 1195 |
| Esp3I | CGTCTC | 1 cut(s) | 1924 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 822, 854, 1299, 1331 |
| FaqI | GGGAC | 1 cut(s) | 2871 |
| FauNDI | CATATG | 2 cut(s) | 707, 3113 |
| FbaI | TGATCA | 1 cut(s) | 454 |
| FblI | GTMKAC | 3 cut(s) | 655, 1074, 1398 |
| Fnu4HI | GCNGC | 8 cut(s) | 48, 51, 495, 510, 1679, 1906, 2536, 2563 |
| FokI | GGATG | 9 cut(s) | 419, 537, 618, 761, 973, 1534, 1652, 2259, 2718 |
| FriOI | GRGCYC | 1 cut(s) | 219 |
| Fsp4HI | GCNGC | 8 cut(s) | 48, 51, 495, 510, 1679, 1906, 2536, 2563 |
| FspBI | CTAG | 5 cut(s) | 963, 1418, 2300, 2618, 2631 |
| FspI | TGCGCA | 1 cut(s) | 2366 |
| GlaI | GCGC | 2 cut(s) | 146, 2366 |
| GluI | GCNGC | 8 cut(s) | 48, 51, 495, 510, 1679, 1906, 2536, 2563 |
| GsaI | CCCAGC | 1 cut(s) | 2752 |
| GsuI | CTGGAG | 2 cut(s) | 1806, 2942 |
| HaeIII | GGCC | 6 cut(s) | 529, 715, 1006, 1200, 1434, 1475 |
| HapII | CCGG | 3 cut(s) | 242, 380, 2873 |
| HgaI | GACGC | 3 cut(s) | 446, 2599, 2698 |
| HhaI | GCGC | 2 cut(s) | 147, 2367 |
| Hin6I | GCGC | 2 cut(s) | 145, 2365 |
| HinP1I | GCGC | 2 cut(s) | 145, 2365 |
| HincII | GTYRAC | 2 cut(s) | 2110, 2824 |
| HindII | GTYRAC | 2 cut(s) | 2110, 2824 |
| HindIII | AAGCTT | 2 cut(s) | 1422, 1717 |
| HpaII | CCGG | 3 cut(s) | 242, 380, 2873 |
| HphI | GGTGA | 6 cut(s) | 146, 231, 446, 1400, 1563, 1589 |
| Hpy166II | GTNNAC | 9 cut(s) | 656, 1075, 1399, 1621, 2046, 2110, 2189, 2824, 2893 |
| Hpy8I | GTNNAC | 9 cut(s) | 656, 1075, 1399, 1621, 2046, 2110, 2189, 2824, 2893 |
| Hpy99I | CGWCG | 1 cut(s) | 3019 |
| HpyAV | CCTTC | 8 cut(s) | 211, 484, 615, 739, 773, 865, 1211, 2807 |
| HpyCH4III | ACNGT | 8 cut(s) | 1403, 1592, 1657, 1838, 2170, 2324, 2559, 2849 |
| HpyCH4IV | ACGT | 8 cut(s) | 621, 951, 1042, 1177, 1617, 1933, 2106, 2889 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 963, 1178, 1340, 1828, 2689 |
| HpySE526I | ACGT | 8 cut(s) | 621, 951, 1042, 1177, 1617, 1933, 2106, 2889 |
| HspAI | GCGC | 2 cut(s) | 145, 2365 |
| Kpn2I | TCCGGA | 1 cut(s) | 2872 |
| Ksp22I | TGATCA | 1 cut(s) | 454 |
| LguI | GCTCTTC | 1 cut(s) | 252 |
| LmnI | GCTCC | 4 cut(s) | 4, 1340, 2875, 3016 |
| Lsp1109I | GCAGC | 6 cut(s) | 59, 62, 506, 521, 2522, 2574 |
| MabI | ACCWGGT | 2 cut(s) | 1573, 2048 |
| MaeI | CTAG | 5 cut(s) | 963, 1418, 2300, 2618, 2631 |
| MaeII | ACGT | 8 cut(s) | 621, 951, 1042, 1177, 1617, 1933, 2106, 2889 |
| MaeIII | GTNAC | 4 cut(s) | 434, 1569, 2095, 2734 |
| MbiI | CCGCTC | 1 cut(s) | 3065 |
| MfeI | CAATTG | 4 cut(s) | 258, 636, 738, 2493 |
| MflI | RGATCY | 4 cut(s) | 397, 2032, 2242, 2524 |
| MhlI | GDGCHC | 2 cut(s) | 219, 879 |
| MlyI | GAGTC | 8 cut(s) | 275, 656, 854, 1577, 2731, 2853, 2981, 3014 |
| MmeI | TCCRAC | 4 cut(s) | 1830, 2010, 2463, 2502 |
| Mph1103I | ATGCAT | 3 cut(s) | 1132, 1527, 3113 |
| MroI | TCCGGA | 1 cut(s) | 2872 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1359 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1921 |
| MspI | CCGG | 3 cut(s) | 242, 380, 2873 |
| MspR9I | CCNGG | 7 cut(s) | 717, 1008, 1575, 1584, 1670, 2050, 2952 |
| MunI | CAATTG | 4 cut(s) | 258, 636, 738, 2493 |
| Mva1269I | GAATGC | 2 cut(s) | 353, 1130 |
| MvaI | CCWGG | 7 cut(s) | 717, 1008, 1575, 1584, 1670, 2050, 2952 |
| MvnI | CGCG | 2 cut(s) | 145, 543 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 963, 1178, 1340, 1828, 2689 |
| NdeI | CATATG | 2 cut(s) | 707, 3113 |
| NlaIV | GGNNCC | 4 cut(s) | 399, 714, 876, 2064 |
| NmuCI | GTSAC | 3 cut(s) | 434, 1569, 2734 |
| NruI | TCGCGA | 1 cut(s) | 543 |
| NsbI | TGCGCA | 1 cut(s) | 2366 |
| NsiI | ATGCAT | 3 cut(s) | 1132, 1527, 3113 |
| NspI | RCATGY | 3 cut(s) | 700, 1130, 1959 |
| PaeI | GCATGC | 1 cut(s) | 1130 |
| PagI | TCATGA | 1 cut(s) | 1057 |
| PceI | AGGCCT | 2 cut(s) | 1200, 1475 |
| PciI | ACATGT | 2 cut(s) | 696, 1955 |
| PciSI | GCTCTTC | 1 cut(s) | 252 |
| PctI | GAATGC | 2 cut(s) | 353, 1130 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1359 |
| PinAI | ACCGGT | 1 cut(s) | 379 |
| PkrI | GCNGC | 8 cut(s) | 49, 52, 496, 511, 1680, 1907, 2537, 2564 |
| Ple19I | CGATCG | 1 cut(s) | 1850 |
| PleI | GAGTC | 8 cut(s) | 274, 655, 854, 1576, 2731, 2853, 2980, 3013 |
| PpsI | GAGTC | 8 cut(s) | 274, 655, 854, 1576, 2731, 2853, 2980, 3013 |
| PpuMI | RGGWCCY | 2 cut(s) | 1289, 1672 |
| PscI | ACATGT | 2 cut(s) | 696, 1955 |
| PshBI | ATTAAT | 2 cut(s) | 560, 2759 |
| PsiI | TTATAA | 1 cut(s) | 2129 |
| Psp124BI | GAGCTC | 1 cut(s) | 219 |
| Psp1406I | AACGTT | 3 cut(s) | 1042, 2106, 2889 |
| Psp5II | RGGWCCY | 2 cut(s) | 1289, 1672 |
| Psp6I | CCWGG | 7 cut(s) | 715, 1006, 1573, 1582, 1668, 2048, 2950 |
| PspFI | CCCAGC | 1 cut(s) | 2748 |
| PspGI | CCWGG | 7 cut(s) | 715, 1006, 1573, 1582, 1668, 2048, 2950 |
| PspN4I | GGNNCC | 4 cut(s) | 399, 714, 876, 2064 |
| PspPI | GGNCC | 5 cut(s) | 713, 1145, 1289, 1621, 1672 |
| PspPPI | RGGWCCY | 2 cut(s) | 1289, 1672 |
| PstI | CTGCAG | 1 cut(s) | 2164 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1675 |
| PsuI | RGATCY | 4 cut(s) | 397, 2032, 2242, 2524 |
| PvuI | CGATCG | 1 cut(s) | 1850 |
| RruI | TCGCGA | 1 cut(s) | 543 |
| RsaI | GTAC | 3 cut(s) | 411, 2047, 2846 |
| RsaNI | GTAC | 3 cut(s) | 410, 2046, 2845 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1921 |
| SacI | GAGCTC | 1 cut(s) | 219 |
| SapI | GCTCTTC | 1 cut(s) | 252 |
| SatI | GCNGC | 8 cut(s) | 48, 51, 495, 510, 1679, 1906, 2536, 2563 |
| Sau96I | GGNCC | 5 cut(s) | 713, 1145, 1289, 1621, 1672 |
| SchI | GAGTC | 8 cut(s) | 275, 656, 854, 1577, 2731, 2853, 2981, 3014 |
| ScrFI | CCNGG | 7 cut(s) | 717, 1008, 1575, 1584, 1670, 2050, 2952 |
| SduI | GDGCHC | 2 cut(s) | 219, 879 |
| SexAI | ACCWGGT | 2 cut(s) | 1573, 2048 |
| SfcI | CTRYAG | 4 cut(s) | 1591, 2160, 2315, 2684 |
| SinI | GGWCC | 4 cut(s) | 1145, 1289, 1621, 1672 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1921 |
| SmlI | CTYRAG | 3 cut(s) | 2192, 2230, 2443 |
| SmoI | CTYRAG | 3 cut(s) | 2192, 2230, 2443 |
| SpeI | ACTAGT | 1 cut(s) | 2617 |
| SphI | GCATGC | 1 cut(s) | 1130 |
| SseBI | AGGCCT | 2 cut(s) | 1200, 1475 |
| SsiI | CCGC | 7 cut(s) | 174, 766, 1678, 1906, 2969, 3058, 3065 |
| SspI | AATATT | 2 cut(s) | 1894, 2353 |
| SspMI | CTAG | 5 cut(s) | 963, 1418, 2300, 2618, 2631 |
| SstI | GAGCTC | 1 cut(s) | 219 |
| StuI | AGGCCT | 2 cut(s) | 1200, 1475 |
| StyD4I | CCNGG | 7 cut(s) | 715, 1006, 1573, 1582, 1668, 2048, 2950 |
| StyI | CCWWGG | 1 cut(s) | 1195 |
| TaaI | ACNGT | 8 cut(s) | 1403, 1592, 1657, 1838, 2170, 2324, 2559, 2849 |
| TaiI | ACGT | 8 cut(s) | 624, 954, 1045, 1180, 1620, 1936, 2109, 2892 |
| TaqI | TCGA | 5 cut(s) | 130, 684, 1464, 2655, 2936 |
| TauI | GCSGC | 2 cut(s) | 1681, 1908 |
| TscAI | CASTG | 4 cut(s) | 1449, 2120, 2473, 3090 |
| TseFI | GTSAC | 3 cut(s) | 434, 1569, 2734 |
| TseI | GCWGC | 6 cut(s) | 47, 50, 494, 509, 2535, 2562 |
| Tsp45I | GTSAC | 3 cut(s) | 434, 1569, 2734 |
| TspGWI | ACGGA | 5 cut(s) | 1313, 1830, 2265, 3003, 3028 |
| TspRI | CASTG | 4 cut(s) | 1449, 2120, 2473, 3090 |
| VpaK11BI | GGWCC | 4 cut(s) | 1145, 1289, 1621, 1672 |
| VspI | ATTAAT | 2 cut(s) | 560, 2759 |
| XceI | RCATGY | 3 cut(s) | 700, 1130, 1959 |
| XmiI | GTMKAC | 3 cut(s) | 655, 1074, 1398 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1359 |
| XspI | CTAG | 5 cut(s) | 963, 1418, 2300, 2618, 2631 |
| Zsp2I | ATGCAT | 3 cut(s) | 1132, 1527, 3113 |