TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 2 - 149 | 2e-15 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 217 - 284 | 2e-18 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 457 - 572 | 6.9e-14 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 569 - 615 | 3.9e-08 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 606 - 660 | 4.5e-11 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 652 - 708 | 1.4e-09 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 698 - 756 | 4e-10 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 753 - 824 | 1.2e-07 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 859 - 943 | 9.6e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 866 - 964 | 2.4e-10 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 786 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3051 |
| AccB1I | GGYRCC | 1 cut(s) | 2475 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 397, 882, 2093 |
| AccI | GTMKAC | 1 cut(s) | 3606 |
| AccII | CGCG | 2 cut(s) | 1643, 2675 |
| AccIII | TCCGGA | 1 cut(s) | 1259 |
| AciI | CCGC | 5 cut(s) | 1512, 2182, 2422, 3285, 3362 |
| AclI | AACGTT | 1 cut(s) | 1279 |
| AclWI | GGATC | 4 cut(s) | 408, 645, 1293, 3378 |
| AcoI | YGGCCR | 1 cut(s) | 183 |
| AcuI | CTGAAG | 7 cut(s) | 138, 1409, 1416, 1727, 2003, 2319, 3291 |
| AcyI | GRCGYC | 1 cut(s) | 2098 |
| AdeI | CACNNNGTG | 1 cut(s) | 646 |
| AfaI | GTAC | 2 cut(s) | 994, 1089 |
| AfeI | AGCGCT | 1 cut(s) | 2512 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 397, 461, 882, 2006, 2093, 2485, 2685 |
| AflII | CTTAAG | 2 cut(s) | 985, 1379 |
| AflIII | ACRYGT | 3 cut(s) | 1641, 2262, 3338 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 2674, 2965 |
| AjiI | CACGTC | 1 cut(s) | 2263 |
| AjnI | CCWGG | 5 cut(s) | 862, 875, 2584, 3115, 3447 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2364, 2396 |
| AleI | CACNNNNGTG | 1 cut(s) | 3107 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3054, 3086 |
| Alw21I | GWGCWC | 2 cut(s) | 756, 1473 |
| Alw26I | GTCTC | 5 cut(s) | 1252, 2108, 2650, 2784, 3059 |
| Alw44I | GTGCAC | 1 cut(s) | 1469 |
| AlwI | GGATC | 4 cut(s) | 408, 645, 1293, 3378 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2648 |
| Ama87I | CYCGRG | 3 cut(s) | 416, 501, 3058 |
| Aor13HI | TCCGGA | 1 cut(s) | 1259 |
| Aor51HI | AGCGCT | 1 cut(s) | 2512 |
| AoxI | GGCC | 6 cut(s) | 183, 505, 765, 1097, 3020, 3099 |
| ApaLI | GTGCAC | 1 cut(s) | 1469 |
| ApeKI | GCWGC | 7 cut(s) | 572, 594, 729, 955, 1846, 2443, 3560 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2628, 2660 |
| AseI | ATTAAT | 4 cut(s) | 377, 747, 2159, 3264 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 93, 437, 657, 2538 |
| AspA2I | CCTAGG | 1 cut(s) | 3167 |
| AspLEI | GCGC | 2 cut(s) | 2513, 2675 |
| AspS9I | GGNCC | 5 cut(s) | 388, 452, 766, 3099, 3442 |
| AsuC2I | CCSGG | 4 cut(s) | 2898, 3059, 3060, 3598 |
| AsuII | TTCGAA | 1 cut(s) | 2908 |
| AsuNHI | GCTAGC | 2 cut(s) | 3358, 3527 |
| AvaI | CYCGRG | 3 cut(s) | 416, 501, 3058 |
| AvaII | GGWCC | 3 cut(s) | 388, 452, 3442 |
| AvrII | CCTAGG | 1 cut(s) | 3167 |
| BaeGI | GKGCMC | 2 cut(s) | 1473, 2480 |
| BalI | TGGCCA | 1 cut(s) | 185 |
| BanI | GGYRCC | 1 cut(s) | 2475 |
| BauI | CACGAG | 2 cut(s) | 3408, 3501 |
| BbsI | GAAGAC | 3 cut(s) | 2714, 3297, 3681 |
| Bbv12I | GWGCWC | 2 cut(s) | 756, 1473 |
| BbvI | GCAGC | 7 cut(s) | 559, 606, 741, 967, 1858, 2430, 3572 |
| BceAI | ACGGC | 1 cut(s) | 3025 |
| BciT130I | CCWGG | 5 cut(s) | 864, 877, 2586, 3117, 3449 |
| BciVI | GTATCC | 1 cut(s) | 1178 |
| BclI | TGATCA | 6 cut(s) | 210, 271, 2578, 3156, 3475, 3613 |
| BcnI | CCSGG | 4 cut(s) | 2898, 3059, 3060, 3598 |
| BcoDI | GTCTC | 5 cut(s) | 1252, 2108, 2650, 2784, 3059 |
| BfaI | CTAG | 7 cut(s) | 195, 530, 1374, 2453, 3168, 3359, 3528 |
| BfmI | CTRYAG | 3 cut(s) | 298, 1844, 3564 |
| BfoI | RGCGCY | 1 cut(s) | 2514 |
| BfrI | CTTAAG | 2 cut(s) | 985, 1379 |
| BfuI | GTATCC | 1 cut(s) | 1178 |
| BisI | GCNGC | 9 cut(s) | 573, 595, 730, 956, 1513, 1847, 2423, 2444, 3561 |
| BlnI | CCTAGG | 1 cut(s) | 3167 |
| BlsI | GCNGC | 9 cut(s) | 574, 596, 731, 957, 1514, 1848, 2424, 2445, 3562 |
| Bme1390I | CCNGG | 9 cut(s) | 864, 877, 2586, 2898, 3059, 3060, 3117, 3449, 3598 |
| Bme18I | GGWCC | 3 cut(s) | 388, 452, 3442 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 2674, 2965 |
| BmeT110I | CYCGRG | 3 cut(s) | 416, 501, 3058 |
| BmgBI | CACGTC | 1 cut(s) | 2263 |
| BmgT120I | GGNCC | 5 cut(s) | 388, 452, 766, 3099, 3442 |
| BmiI | GGNNCC | 5 cut(s) | 2477, 2590, 3100, 3443, 3648 |
| BmrFI | CCNGG | 9 cut(s) | 864, 877, 2586, 2898, 3059, 3060, 3117, 3449, 3598 |
| BmtI | GCTAGC | 2 cut(s) | 3362, 3531 |
| BpiI | GAAGAC | 3 cut(s) | 2714, 3297, 3681 |
| BpmI | CTGGAG | 1 cut(s) | 1074 |
| Bpu14I | TTCGAA | 1 cut(s) | 2908 |
| BpuEI | CTTGAG | 2 cut(s) | 1102, 1469 |
| BpuMI | CCSGG | 4 cut(s) | 2898, 3059, 3060, 3598 |
| Bsa29I | ATCGAT | 1 cut(s) | 1607 |
| BsaAI | YACGTR | 1 cut(s) | 703 |
| BsaBI | GATNNNNATC | 4 cut(s) | 270, 2014, 3474, 3615 |
| BsaHI | GRCGYC | 1 cut(s) | 2098 |
| BsaWI | WCCGGW | 1 cut(s) | 1259 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3408, 3438 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 397, 461, 882, 2006, 2093, 2485, 2685 |
| Bse1I | ACTGG | 2 cut(s) | 2490, 2883 |
| Bse3DI | GCAATG | 4 cut(s) | 569, 2984, 3529, 3714 |
| Bse8I | GATNNNNATC | 4 cut(s) | 270, 2014, 3474, 3615 |
| BseAI | TCCGGA | 1 cut(s) | 1259 |
| BseBI | CCWGG | 5 cut(s) | 864, 877, 2586, 3117, 3449 |
| BseCI | ATCGAT | 1 cut(s) | 1607 |
| BseJI | GATNNNNATC | 4 cut(s) | 270, 2014, 3474, 3615 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 397, 461, 882, 2006, 2093, 2485, 2685 |
| BseMI | GCAATG | 4 cut(s) | 569, 2984, 3529, 3714 |
| BseMII | CTCAG | 2 cut(s) | 3123, 3713 |
| BseNI | ACTGG | 2 cut(s) | 2490, 2883 |
| BseSI | GKGCMC | 2 cut(s) | 1473, 2480 |
| BseXI | GCAGC | 7 cut(s) | 559, 606, 741, 967, 1858, 2430, 3572 |
| BsgI | GTGCAG | 2 cut(s) | 974, 2550 |
| Bsh1236I | CGCG | 2 cut(s) | 1643, 2675 |
| BshFI | GGCC | 6 cut(s) | 185, 507, 767, 1099, 3022, 3101 |
| BshNI | GGYRCC | 1 cut(s) | 2475 |
| BshVI | ATCGAT | 1 cut(s) | 1607 |
| BsiHKAI | GWGCWC | 2 cut(s) | 756, 1473 |
| BsiHKCI | CYCGRG | 3 cut(s) | 416, 501, 3058 |
| BsiSI | CCGG | 5 cut(s) | 1260, 2726, 2897, 3059, 3597 |
| BslFI | GGGAC | 2 cut(s) | 1638, 2913 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 397, 461, 882, 2006, 2093, 2485, 2685 |
| BsmAI | GTCTC | 5 cut(s) | 1252, 2108, 2650, 2784, 3059 |
| BsmFI | GGGAC | 2 cut(s) | 1638, 2913 |
| BsmI | GAATGC | 2 cut(s) | 439, 1528 |
| BsnI | GGCC | 6 cut(s) | 185, 507, 767, 1099, 3022, 3101 |
| BsoBI | CYCGRG | 3 cut(s) | 416, 501, 3058 |
| Bsp119I | TTCGAA | 1 cut(s) | 2908 |
| Bsp1286I | GDGCHC | 3 cut(s) | 756, 1473, 2480 |
| Bsp13I | TCCGGA | 1 cut(s) | 1259 |
| BspACI | CCGC | 5 cut(s) | 1512, 2182, 2422, 3285, 3362 |
| BspANI | GGCC | 6 cut(s) | 185, 507, 767, 1099, 3022, 3101 |
| BspCNI | CTCAG | 2 cut(s) | 3124, 3714 |
| BspDI | ATCGAT | 1 cut(s) | 1607 |
| BspEI | TCCGGA | 1 cut(s) | 1259 |
| BspFNI | CGCG | 2 cut(s) | 1643, 2675 |
| BspHI | TCATGA | 5 cut(s) | 406, 889, 3313, 3373, 3619 |
| BspLI | GGNNCC | 5 cut(s) | 2477, 2590, 3100, 3443, 3648 |
| BspMAI | CTGCAG | 1 cut(s) | 1848 |
| BspOI | GCTAGC | 2 cut(s) | 3362, 3531 |
| BspPI | GGATC | 4 cut(s) | 408, 645, 1293, 3378 |
| BspT104I | TTCGAA | 1 cut(s) | 2908 |
| BspT107I | GGYRCC | 1 cut(s) | 2475 |
| BspTI | CTTAAG | 2 cut(s) | 985, 1379 |
| BsrDI | GCAATG | 4 cut(s) | 569, 2984, 3529, 3714 |
| BsrI | ACTGG | 2 cut(s) | 2490, 2883 |
| BssNI | GRCGYC | 1 cut(s) | 2098 |
| BssSI | CACGAG | 2 cut(s) | 3408, 3501 |
| BssT1I | CCWWGG | 7 cut(s) | 933, 1626, 1764, 1902, 2040, 2109, 3167 |
| Bst2BI | CACGAG | 2 cut(s) | 3408, 3501 |
| Bst2UI | CCWGG | 5 cut(s) | 864, 877, 2586, 3117, 3449 |
| Bst6I | CTCTTC | 3 cut(s) | 1765, 1903, 2544 |
| BstACI | GRCGYC | 1 cut(s) | 2098 |
| BstAFI | CTTAAG | 2 cut(s) | 985, 1379 |
| BstBAI | YACGTR | 1 cut(s) | 703 |
| BstBI | TTCGAA | 1 cut(s) | 2908 |
| BstC8I | GCNNGC | 5 cut(s) | 2509, 2615, 2731, 3360, 3529 |
| BstDEI | CTNAG | 7 cut(s) | 244, 286, 1019, 1289, 2411, 3132, 3722 |
| BstFNI | CGCG | 2 cut(s) | 1643, 2675 |
| BstH2I | RGCGCY | 1 cut(s) | 2514 |
| BstHHI | GCGC | 2 cut(s) | 2513, 2675 |
| BstMAI | GTCTC | 5 cut(s) | 1252, 2108, 2650, 2784, 3059 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 191, 2614, 2995, 3528, 3566, 3713 |
| BstNI | CCWGG | 5 cut(s) | 864, 877, 2586, 3117, 3449 |
| BstNSI | RCATGY | 5 cut(s) | 675, 743, 1012, 2733, 3342 |
| BstSCI | CCNGG | 9 cut(s) | 862, 875, 2584, 2896, 3057, 3058, 3115, 3447, 3596 |
| BstSFI | CTRYAG | 3 cut(s) | 298, 1844, 3564 |
| BstSLI | GKGCMC | 2 cut(s) | 1473, 2480 |
| BstUI | CGCG | 2 cut(s) | 1643, 2675 |
| BstV1I | GCAGC | 7 cut(s) | 559, 606, 741, 967, 1858, 2430, 3572 |
| BstV2I | GAAGAC | 3 cut(s) | 2714, 3297, 3681 |
| BstX2I | RGATCY | 1 cut(s) | 1285 |
| BstYI | RGATCY | 1 cut(s) | 1285 |
| Bsu15I | ATCGAT | 1 cut(s) | 1607 |
| BsuI | GTATCC | 1 cut(s) | 1178 |
| BsuRI | GGCC | 6 cut(s) | 185, 507, 767, 1099, 3022, 3101 |
| BsuTUI | ATCGAT | 1 cut(s) | 1607 |
| BtgZI | GCGATG | 1 cut(s) | 652 |
| BtrI | CACGTC | 1 cut(s) | 2263 |
| BtsIMutI | CAGTG | 2 cut(s) | 2434, 2594 |
| Cac8I | GCNNGC | 5 cut(s) | 2509, 2615, 2731, 3360, 3529 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2648 |
| CciI | TCATGA | 5 cut(s) | 406, 889, 3313, 3373, 3619 |
| CfoI | GCGC | 2 cut(s) | 2513, 2675 |
| Cfr13I | GGNCC | 5 cut(s) | 388, 452, 766, 3099, 3442 |
| Cfr9I | CCCGGG | 1 cut(s) | 3058 |
| ClaI | ATCGAT | 1 cut(s) | 1607 |
| CseI | GACGC | 8 cut(s) | 1053, 1429, 1632, 1649, 1925, 2087, 2339, 2664 |
| CsiI | ACCWGGT | 1 cut(s) | 875 |
| Csp6I | GTAC | 2 cut(s) | 993, 1088 |
| CviQI | GTAC | 2 cut(s) | 993, 1088 |
| DdeI | CTNAG | 7 cut(s) | 244, 286, 1019, 1289, 2411, 3132, 3722 |
| DraI | TTTAAA | 2 cut(s) | 682, 2626 |
| DraIII | CACNNNGTG | 1 cut(s) | 646 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3051 |
| DriI | GACNNNNNGTC | 2 cut(s) | 2674, 2965 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3051 |
| EaeI | YGGCCR | 1 cut(s) | 183 |
| Eam1104I | CTCTTC | 3 cut(s) | 1765, 1903, 2544 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 2674, 2965 |
| EarI | CTCTTC | 3 cut(s) | 1765, 1903, 2544 |
| Eco130I | CCWWGG | 7 cut(s) | 933, 1626, 1764, 1902, 2040, 2109, 3167 |
| Eco147I | AGGCCT | 1 cut(s) | 507 |
| Eco47I | GGWCC | 3 cut(s) | 388, 452, 3442 |
| Eco47III | AGCGCT | 1 cut(s) | 2512 |
| Eco57I | CTGAAG | 7 cut(s) | 138, 1409, 1416, 1727, 2003, 2319, 3291 |
| Eco88I | CYCGRG | 3 cut(s) | 416, 501, 3058 |
| EcoO109I | RGGNCCY | 1 cut(s) | 766 |
| EcoRII | CCWGG | 5 cut(s) | 862, 875, 2584, 3115, 3447 |
| EcoT14I | CCWWGG | 7 cut(s) | 933, 1626, 1764, 1902, 2040, 2109, 3167 |
| EcoT22I | ATGCAT | 3 cut(s) | 807, 1783, 2735 |
| ErhI | CCWWGG | 7 cut(s) | 933, 1626, 1764, 1902, 2040, 2109, 3167 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 645, 677, 2973, 3005 |
| FaqI | GGGAC | 2 cut(s) | 1638, 2913 |
| FauI | CCCGC | 1 cut(s) | 2175 |
| FbaI | TGATCA | 6 cut(s) | 210, 271, 2578, 3156, 3475, 3613 |
| FblI | GTMKAC | 1 cut(s) | 3606 |
| Fnu4HI | GCNGC | 9 cut(s) | 573, 595, 730, 956, 1513, 1847, 2423, 2444, 3561 |
| Fsp4HI | GCNGC | 9 cut(s) | 573, 595, 730, 956, 1513, 1847, 2423, 2444, 3561 |
| FspBI | CTAG | 7 cut(s) | 195, 530, 1374, 2453, 3168, 3359, 3528 |
| GlaI | GCGC | 2 cut(s) | 2512, 2674 |
| GluI | GCNGC | 9 cut(s) | 573, 595, 730, 956, 1513, 1847, 2423, 2444, 3561 |
| GsuI | CTGGAG | 1 cut(s) | 1074 |
| HaeII | RGCGCY | 1 cut(s) | 2514 |
| HaeIII | GGCC | 6 cut(s) | 185, 507, 767, 1099, 3022, 3101 |
| HapII | CCGG | 5 cut(s) | 1260, 2726, 2897, 3059, 3597 |
| HgaI | GACGC | 8 cut(s) | 1053, 1429, 1632, 1649, 1925, 2087, 2339, 2664 |
| HhaI | GCGC | 2 cut(s) | 2513, 2675 |
| Hin1I | GRCGYC | 1 cut(s) | 2098 |
| Hin6I | GCGC | 2 cut(s) | 2511, 2673 |
| HinP1I | GCGC | 2 cut(s) | 2511, 2673 |
| HincII | GTYRAC | 1 cut(s) | 357 |
| HindII | GTYRAC | 1 cut(s) | 357 |
| HindIII | AAGCTT | 4 cut(s) | 654, 720, 1560, 2237 |
| HpaII | CCGG | 5 cut(s) | 1260, 2726, 2897, 3059, 3597 |
| Hpy166II | GTNNAC | 9 cut(s) | 357, 841, 901, 1471, 2434, 2679, 3028, 3445, 3607 |
| Hpy8I | GTNNAC | 9 cut(s) | 357, 841, 901, 1471, 2434, 2679, 3028, 3445, 3607 |
| HpyCH4IV | ACGT | 7 cut(s) | 484, 702, 1279, 1543, 1553, 2055, 2262 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 191, 2614, 2995, 3528, 3566, 3713 |
| HpyF3I | CTNAG | 7 cut(s) | 244, 286, 1019, 1289, 2411, 3132, 3722 |
| HpySE526I | ACGT | 7 cut(s) | 484, 702, 1279, 1543, 1553, 2055, 2262 |
| Hsp92I | GRCGYC | 1 cut(s) | 2098 |
| HspAI | GCGC | 2 cut(s) | 2511, 2673 |
| Kpn2I | TCCGGA | 1 cut(s) | 1259 |
| Ksp22I | TGATCA | 6 cut(s) | 210, 271, 2578, 3156, 3475, 3613 |
| LmnI | GCTCC | 3 cut(s) | 963, 3355, 3429 |
| Lsp1109I | GCAGC | 7 cut(s) | 559, 606, 741, 967, 1858, 2430, 3572 |
| MabI | ACCWGGT | 1 cut(s) | 875 |
| MaeI | CTAG | 7 cut(s) | 195, 530, 1374, 2453, 3168, 3359, 3528 |
| MaeII | ACGT | 7 cut(s) | 484, 702, 1279, 1543, 1553, 2055, 2262 |
| MaeIII | GTNAC | 9 cut(s) | 293, 623, 849, 1106, 1292, 2488, 3005, 3250, 3385 |
| MflI | RGATCY | 1 cut(s) | 1285 |
| MhlI | GDGCHC | 3 cut(s) | 756, 1473, 2480 |
| MlsI | TGGCCA | 1 cut(s) | 185 |
| MluI | ACGCGT | 1 cut(s) | 1641 |
| MluNI | TGGCCA | 1 cut(s) | 185 |
| MlyI | GAGTC | 1 cut(s) | 1490 |
| Mox20I | TGGCCA | 1 cut(s) | 185 |
| Mph1103I | ATGCAT | 3 cut(s) | 807, 1783, 2735 |
| MroI | TCCGGA | 1 cut(s) | 1259 |
| MroXI | GAANNNNTTC | 4 cut(s) | 93, 437, 657, 2538 |
| MscI | TGGCCA | 1 cut(s) | 185 |
| MslI | CAYNNNNRTG | 7 cut(s) | 800, 894, 950, 2960, 3107, 3318, 3621 |
| Msp20I | TGGCCA | 1 cut(s) | 185 |
| MspA1I | CMGCKG | 3 cut(s) | 1849, 2998, 3563 |
| MspCI | CTTAAG | 2 cut(s) | 985, 1379 |
| MspI | CCGG | 5 cut(s) | 1260, 2726, 2897, 3059, 3597 |
| MspR9I | CCNGG | 9 cut(s) | 864, 877, 2586, 2898, 3059, 3060, 3117, 3449, 3598 |
| Mva1269I | GAATGC | 2 cut(s) | 439, 1528 |
| MvaI | CCWGG | 5 cut(s) | 864, 877, 2586, 3117, 3449 |
| MvnI | CGCG | 2 cut(s) | 1643, 2675 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 191, 2614, 2995, 3528, 3566, 3713 |
| NciI | CCSGG | 4 cut(s) | 2898, 3059, 3060, 3598 |
| NheI | GCTAGC | 2 cut(s) | 3358, 3527 |
| NlaIV | GGNNCC | 5 cut(s) | 2477, 2590, 3100, 3443, 3648 |
| NmeAIII | GCCGAG | 1 cut(s) | 3476 |
| NmuCI | GTSAC | 7 cut(s) | 293, 849, 1106, 2488, 3005, 3250, 3385 |
| NsiI | ATGCAT | 3 cut(s) | 807, 1783, 2735 |
| NspI | RCATGY | 5 cut(s) | 675, 743, 1012, 2733, 3342 |
| NspV | TTCGAA | 1 cut(s) | 2908 |
| OliI | CACNNNNGTG | 1 cut(s) | 3107 |
| PaeI | GCATGC | 1 cut(s) | 2733 |
| PaeR7I | CTCGAG | 2 cut(s) | 416, 501 |
| PagI | TCATGA | 5 cut(s) | 406, 889, 3313, 3373, 3619 |
| PceI | AGGCCT | 1 cut(s) | 507 |
| PciI | ACATGT | 1 cut(s) | 3338 |
| PctI | GAATGC | 2 cut(s) | 439, 1528 |
| PdmI | GAANNNNTTC | 4 cut(s) | 93, 437, 657, 2538 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 397, 882, 2093 |
| PfoI | TCCNGGA | 1 cut(s) | 2896 |
| PkrI | GCNGC | 9 cut(s) | 574, 596, 731, 957, 1514, 1848, 2424, 2445, 3562 |
| PleI | GAGTC | 1 cut(s) | 1489 |
| PpsI | GAGTC | 1 cut(s) | 1489 |
| Ppu21I | YACGTR | 1 cut(s) | 703 |
| PscI | ACATGT | 1 cut(s) | 3338 |
| PshBI | ATTAAT | 4 cut(s) | 377, 747, 2159, 3264 |
| PsiI | TTATAA | 1 cut(s) | 786 |
| Psp1406I | AACGTT | 1 cut(s) | 1279 |
| Psp6I | CCWGG | 5 cut(s) | 862, 875, 2584, 3115, 3447 |
| PspGI | CCWGG | 5 cut(s) | 862, 875, 2584, 3115, 3447 |
| PspN4I | GGNNCC | 5 cut(s) | 2477, 2590, 3100, 3443, 3648 |
| PspPI | GGNCC | 5 cut(s) | 388, 452, 766, 3099, 3442 |
| PspXI | VCTCGAGB | 1 cut(s) | 501 |
| PstI | CTGCAG | 1 cut(s) | 1848 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2648 |
| PsuI | RGATCY | 1 cut(s) | 1285 |
| PvuII | CAGCTG | 3 cut(s) | 1849, 2998, 3563 |
| RsaI | GTAC | 2 cut(s) | 994, 1089 |
| RsaNI | GTAC | 2 cut(s) | 993, 1088 |
| RseI | CAYNNNNRTG | 7 cut(s) | 800, 894, 950, 2960, 3107, 3318, 3621 |
| SatI | GCNGC | 9 cut(s) | 573, 595, 730, 956, 1513, 1847, 2423, 2444, 3561 |
| Sau96I | GGNCC | 5 cut(s) | 388, 452, 766, 3099, 3442 |
| SchI | GAGTC | 1 cut(s) | 1490 |
| ScrFI | CCNGG | 9 cut(s) | 864, 877, 2586, 2898, 3059, 3060, 3117, 3449, 3598 |
| SduI | GDGCHC | 3 cut(s) | 756, 1473, 2480 |
| SexAI | ACCWGGT | 1 cut(s) | 875 |
| SfcI | CTRYAG | 3 cut(s) | 298, 1844, 3564 |
| Sfr274I | CTCGAG | 2 cut(s) | 416, 501 |
| SfuI | TTCGAA | 1 cut(s) | 2908 |
| SinI | GGWCC | 3 cut(s) | 388, 452, 3442 |
| SlaI | CTCGAG | 2 cut(s) | 416, 501 |
| SmaI | CCCGGG | 1 cut(s) | 3060 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 800, 894, 950, 2960, 3107, 3318, 3621 |
| SmlI | CTYRAG | 6 cut(s) | 416, 501, 985, 1081, 1379, 1448 |
| SmoI | CTYRAG | 6 cut(s) | 416, 501, 985, 1081, 1379, 1448 |
| SphI | GCATGC | 1 cut(s) | 2733 |
| SseBI | AGGCCT | 1 cut(s) | 507 |
| SsiI | CCGC | 5 cut(s) | 1512, 2182, 2422, 3285, 3362 |
| SspI | AATATT | 2 cut(s) | 714, 922 |
| SspMI | CTAG | 7 cut(s) | 195, 530, 1374, 2453, 3168, 3359, 3528 |
| StuI | AGGCCT | 1 cut(s) | 507 |
| StyD4I | CCNGG | 9 cut(s) | 862, 875, 2584, 2896, 3057, 3058, 3115, 3447, 3596 |
| StyI | CCWWGG | 7 cut(s) | 933, 1626, 1764, 1902, 2040, 2109, 3167 |
| TaiI | ACGT | 7 cut(s) | 487, 705, 1282, 1546, 1556, 2058, 2265 |
| TauI | GCSGC | 2 cut(s) | 1515, 2425 |
| TscAI | CASTG | 2 cut(s) | 2434, 2601 |
| TseFI | GTSAC | 7 cut(s) | 293, 849, 1106, 2488, 3005, 3250, 3385 |
| TseI | GCWGC | 7 cut(s) | 572, 594, 729, 955, 1846, 2443, 3560 |
| Tsp45I | GTSAC | 7 cut(s) | 293, 849, 1106, 2488, 3005, 3250, 3385 |
| TspGWI | ACGGA | 3 cut(s) | 465, 2451, 2701 |
| TspMI | CCCGGG | 1 cut(s) | 3058 |
| TspRI | CASTG | 2 cut(s) | 2434, 2601 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 397, 882, 2093 |
| Vha464I | CTTAAG | 2 cut(s) | 985, 1379 |
| VneI | GTGCAC | 1 cut(s) | 1469 |
| VpaK11BI | GGWCC | 3 cut(s) | 388, 452, 3442 |
| VspI | ATTAAT | 4 cut(s) | 377, 747, 2159, 3264 |
| XbaI | TCTAGA | 1 cut(s) | 2452 |
| XceI | RCATGY | 5 cut(s) | 675, 743, 1012, 2733, 3342 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3233 |
| XhoI | CTCGAG | 2 cut(s) | 416, 501 |
| XmaI | CCCGGG | 1 cut(s) | 3058 |
| XmaJI | CCTAGG | 1 cut(s) | 3167 |
| XmiI | GTMKAC | 1 cut(s) | 3606 |
| XmnI | GAANNNNTTC | 4 cut(s) | 93, 437, 657, 2538 |
| XspI | CTAG | 7 cut(s) | 195, 530, 1374, 2453, 3168, 3359, 3528 |
| Zsp2I | ATGCAT | 3 cut(s) | 807, 1783, 2735 |