TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 26 - 186 | 6.9e-51 | TIR domain |
| TIR_2 | PF13676 | 28 - 122 | 2.1e-12 | TIR domain |
| NB-ARC | PF00931 | 212 - 370 | 1e-21 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 442 - 511 | 1.3e-15 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 717 - 897 | 9.9e-21 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 727 - 789 | 1.9e-07 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 2142 |
| AccI | GTMKAC | 3 cut(s) | 622, 1047, 1581 |
| AccII | CGCG | 2 cut(s) | 112, 2762 |
| AccIII | TCCGGA | 1 cut(s) | 2026 |
| AciI | CCGC | 8 cut(s) | 1869, 2074, 2140, 2596, 2633, 2717, 2760, 2762 |
| AclI | AACGTT | 2 cut(s) | 1015, 1284 |
| AclWI | GGATC | 4 cut(s) | 359, 372, 1256, 2280 |
| AcuI | CTGAAG | 1 cut(s) | 154 |
| AdeI | CACNNNGTG | 2 cut(s) | 1151, 1538 |
| AfaI | GTAC | 2 cut(s) | 515, 2815 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1444, 1636 |
| AflIII | ACRYGT | 1 cut(s) | 1916 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 629 |
| AhlI | ACTAGT | 1 cut(s) | 17 |
| AjiI | CACGTC | 1 cut(s) | 1151 |
| AjnI | CCWGG | 4 cut(s) | 688, 1534, 1629, 2698 |
| Alw26I | GTCTC | 4 cut(s) | 933, 1206, 1743, 2602 |
| AlwI | GGATC | 4 cut(s) | 359, 372, 1256, 2280 |
| Ama87I | CYCGRG | 2 cut(s) | 1544, 1635 |
| Aor13HI | TCCGGA | 1 cut(s) | 2026 |
| AoxI | GGCC | 7 cut(s) | 494, 686, 977, 1171, 1446, 1632, 2645 |
| ApeKI | GCWGC | 6 cut(s) | 461, 476, 593, 1554, 2076, 2310 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1563, 1595, 2063, 2095 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1103, 2853 |
| AspLEI | GCGC | 2 cut(s) | 114, 418 |
| AspS9I | GGNCC | 5 cut(s) | 686, 832, 977, 1118, 1633 |
| AsuC2I | CCSGG | 6 cut(s) | 981, 1545, 1546, 1636, 1637, 2818 |
| AsuHPI | GGTGA | 7 cut(s) | 50, 413, 731, 859, 1524, 1550, 2554 |
| AvaI | CYCGRG | 2 cut(s) | 1544, 1635 |
| AvaII | GGWCC | 2 cut(s) | 832, 1118 |
| BamHI | GGATCC | 1 cut(s) | 364 |
| BanII | GRGCYC | 2 cut(s) | 186, 1545 |
| BbsI | GAAGAC | 3 cut(s) | 247, 1633, 2540 |
| BbvI | GCAGC | 6 cut(s) | 473, 488, 580, 1566, 2063, 2322 |
| BccI | CCATC | 7 cut(s) | 173, 486, 500, 1720, 1773, 1825, 2399 |
| BceAI | ACGGC | 1 cut(s) | 1895 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1999, 2033 |
| BciT130I | CCWGG | 4 cut(s) | 690, 1536, 1631, 2700 |
| BciVI | GTATCC | 1 cut(s) | 100 |
| BclI | TGATCA | 4 cut(s) | 55, 421, 859, 1072 |
| BcnI | CCSGG | 6 cut(s) | 981, 1545, 1546, 1636, 1637, 2818 |
| BcoDI | GTCTC | 4 cut(s) | 933, 1206, 1743, 2602 |
| BcuI | ACTAGT | 1 cut(s) | 17 |
| BfaI | CTAG | 3 cut(s) | 18, 1391, 2789 |
| BfmI | CTRYAG | 2 cut(s) | 316, 2432 |
| BfuI | GTATCC | 1 cut(s) | 100 |
| BglII | AGATCT | 1 cut(s) | 2436 |
| BisI | GCNGC | 7 cut(s) | 462, 477, 594, 1555, 1870, 2077, 2311 |
| BlsI | GCNGC | 7 cut(s) | 463, 478, 595, 1556, 1871, 2078, 2312 |
| Bme18I | GGWCC | 2 cut(s) | 832, 1118 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 629 |
| BmeT110I | CYCGRG | 2 cut(s) | 1544, 1635 |
| BmgBI | CACGTC | 1 cut(s) | 1151 |
| BmgT120I | GGNCC | 5 cut(s) | 686, 832, 977, 1118, 1633 |
| BmiI | GGNNCC | 6 cut(s) | 366, 687, 833, 834, 2025, 2781 |
| BmsI | GCATC | 8 cut(s) | 879, 1294, 1473, 1635, 1881, 2444, 2568, 2834 |
| BpiI | GAAGAC | 3 cut(s) | 247, 1633, 2540 |
| BpmI | CTGGAG | 3 cut(s) | 1767, 2645, 2721 |
| BpuEI | CTTGAG | 3 cut(s) | 452, 2174, 2212 |
| BpuMI | CCSGG | 6 cut(s) | 981, 1545, 1546, 1636, 1637, 2818 |
| Bsa29I | ATCGAT | 1 cut(s) | 347 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1071 |
| BsaI | GGTCTC | 1 cut(s) | 1206 |
| BsaJI | CCNNGG | 6 cut(s) | 651, 1168, 1544, 1545, 1635, 2760 |
| BsaWI | WCCGGW | 1 cut(s) | 2026 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1444, 1636 |
| Bse1I | ACTGG | 2 cut(s) | 303, 2117 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1071 |
| BseAI | TCCGGA | 1 cut(s) | 2026 |
| BseBI | CCWGG | 4 cut(s) | 690, 1536, 1631, 2700 |
| BseCI | ATCGAT | 1 cut(s) | 347 |
| BseDI | CCNNGG | 6 cut(s) | 651, 1168, 1544, 1545, 1635, 2760 |
| BseGI | GGATG | 7 cut(s) | 497, 511, 1488, 1626, 1695, 2239, 2459 |
| BseJI | GATNNNNATC | 1 cut(s) | 1071 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1444, 1636 |
| BseMII | CTCAG | 5 cut(s) | 80, 199, 384, 1698, 2663 |
| BseNI | ACTGG | 2 cut(s) | 303, 2117 |
| BseRI | GAGGAG | 4 cut(s) | 207, 1241, 2689, 2849 |
| BseXI | GCAGC | 6 cut(s) | 473, 488, 580, 1566, 2063, 2322 |
| BseYI | CCCAGC | 2 cut(s) | 835, 2499 |
| BsgI | GTGCAG | 2 cut(s) | 2329, 2740 |
| Bsh1236I | CGCG | 2 cut(s) | 112, 2762 |
| BshFI | GGCC | 7 cut(s) | 496, 688, 979, 1173, 1448, 1634, 2647 |
| BshVI | ATCGAT | 1 cut(s) | 347 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1544, 1635 |
| BsiSI | CCGG | 5 cut(s) | 980, 1545, 1636, 2027, 2817 |
| BslFI | GGGAC | 2 cut(s) | 845, 1905 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1444, 1636 |
| BsmAI | GTCTC | 4 cut(s) | 933, 1206, 1743, 2602 |
| BsmFI | GGGAC | 2 cut(s) | 845, 1905 |
| BsmI | GAATGC | 3 cut(s) | 1103, 1105, 1675 |
| BsnI | GGCC | 7 cut(s) | 496, 688, 979, 1173, 1448, 1634, 2647 |
| Bso31I | GGTCTC | 1 cut(s) | 1206 |
| BsoBI | CYCGRG | 2 cut(s) | 1544, 1635 |
| Bsp1286I | GDGCHC | 2 cut(s) | 186, 1545 |
| Bsp13I | TCCGGA | 1 cut(s) | 2026 |
| BspACI | CCGC | 8 cut(s) | 1869, 2074, 2140, 2596, 2633, 2717, 2760, 2762 |
| BspANI | GGCC | 7 cut(s) | 496, 688, 979, 1173, 1448, 1634, 2647 |
| BspCNI | CTCAG | 5 cut(s) | 81, 198, 383, 1697, 2664 |
| BspDI | ATCGAT | 1 cut(s) | 347 |
| BspEI | TCCGGA | 1 cut(s) | 2026 |
| BspFNI | CGCG | 2 cut(s) | 112, 2762 |
| BspHI | TCATGA | 1 cut(s) | 2845 |
| BspLI | GGNNCC | 6 cut(s) | 366, 687, 833, 834, 2025, 2781 |
| BspMAI | CTGCAG | 1 cut(s) | 320 |
| BspPI | GGATC | 4 cut(s) | 359, 372, 1256, 2280 |
| BspQI | GCTCTTC | 1 cut(s) | 219 |
| BspTNI | GGTCTC | 1 cut(s) | 1206 |
| BsrBI | CCGCTC | 1 cut(s) | 2142 |
| BsrI | ACTGG | 2 cut(s) | 303, 2117 |
| BssECI | CCNNGG | 6 cut(s) | 651, 1168, 1544, 1545, 1635, 2760 |
| BssNAI | GTATAC | 1 cut(s) | 1048 |
| BssT1I | CCWWGG | 1 cut(s) | 1168 |
| Bst1107I | GTATAC | 1 cut(s) | 1048 |
| Bst2UI | CCWGG | 4 cut(s) | 690, 1536, 1631, 2700 |
| Bst4CI | ACNGT | 1 cut(s) | 2307 |
| Bst6I | CTCTTC | 3 cut(s) | 184, 219, 2760 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 413, 1151 |
| BstC8I | GCNNGC | 4 cut(s) | 1399, 2150, 2557, 2823 |
| BstDEI | CTNAG | 7 cut(s) | 89, 185, 289, 370, 1684, 1700, 2672 |
| BstDSI | CCRYGG | 1 cut(s) | 2760 |
| BstF5I | GGATG | 7 cut(s) | 497, 511, 1488, 1626, 1695, 2239, 2459 |
| BstFNI | CGCG | 2 cut(s) | 112, 2762 |
| BstHHI | GCGC | 2 cut(s) | 114, 418 |
| BstMAI | GTCTC | 4 cut(s) | 933, 1206, 1743, 2602 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 413, 675, 808, 1151, 2593 |
| BstNI | CCWGG | 4 cut(s) | 690, 1536, 1631, 2700 |
| BstNSI | RCATGY | 1 cut(s) | 1920 |
| BstSFI | CTRYAG | 2 cut(s) | 316, 2432 |
| BstUI | CGCG | 2 cut(s) | 112, 2762 |
| BstV1I | GCAGC | 6 cut(s) | 473, 488, 580, 1566, 2063, 2322 |
| BstV2I | GAAGAC | 3 cut(s) | 247, 1633, 2540 |
| BstX2I | RGATCY | 4 cut(s) | 364, 1261, 2272, 2436 |
| BstYI | RGATCY | 4 cut(s) | 364, 1261, 2272, 2436 |
| BstZ17I | GTATAC | 1 cut(s) | 1048 |
| Bsu15I | ATCGAT | 1 cut(s) | 347 |
| BsuI | GTATCC | 1 cut(s) | 100 |
| BsuRI | GGCC | 7 cut(s) | 496, 688, 979, 1173, 1448, 1634, 2647 |
| BsuTUI | ATCGAT | 1 cut(s) | 347 |
| BtgI | CCRYGG | 1 cut(s) | 2760 |
| BtrI | CACGTC | 1 cut(s) | 1151 |
| BtsCI | GGATG | 7 cut(s) | 497, 511, 1488, 1626, 1695, 2239, 2459 |
| BtsI | GCAGTG | 2 cut(s) | 138, 2752 |
| BtsIMutI | CAGTG | 4 cut(s) | 138, 1422, 2669, 2752 |
| Cac8I | GCNNGC | 4 cut(s) | 1399, 2150, 2557, 2823 |
| CciI | TCATGA | 1 cut(s) | 2845 |
| CfoI | GCGC | 2 cut(s) | 114, 418 |
| Cfr13I | GGNCC | 5 cut(s) | 686, 832, 977, 1118, 1633 |
| Cfr42I | CCGCGG | 1 cut(s) | 2763 |
| Cfr9I | CCCGGG | 2 cut(s) | 1544, 1635 |
| ClaI | ATCGAT | 1 cut(s) | 347 |
| CsiI | ACCWGGT | 1 cut(s) | 1534 |
| Csp6I | GTAC | 2 cut(s) | 514, 2814 |
| CviQI | GTAC | 2 cut(s) | 514, 2814 |
| DdeI | CTNAG | 7 cut(s) | 89, 185, 289, 370, 1684, 1700, 2672 |
| DraI | TTTAAA | 2 cut(s) | 1357, 2334 |
| DraIII | CACNNNGTG | 2 cut(s) | 1151, 1538 |
| DriI | GACNNNNNGTC | 1 cut(s) | 629 |
| Eam1104I | CTCTTC | 3 cut(s) | 184, 219, 2760 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 629 |
| EarI | CTCTTC | 3 cut(s) | 184, 219, 2760 |
| EciI | GGCGGA | 2 cut(s) | 2622, 2732 |
| Eco130I | CCWWGG | 1 cut(s) | 1168 |
| Eco147I | AGGCCT | 2 cut(s) | 1173, 1448 |
| Eco24I | GRGCYC | 2 cut(s) | 186, 1545 |
| Eco31I | GGTCTC | 1 cut(s) | 1206 |
| Eco32I | GATATC | 2 cut(s) | 1662, 2446 |
| Eco47I | GGWCC | 2 cut(s) | 832, 1118 |
| Eco57I | CTGAAG | 1 cut(s) | 154 |
| Eco88I | CYCGRG | 2 cut(s) | 1544, 1635 |
| EcoO109I | RGGNCCY | 2 cut(s) | 686, 832 |
| EcoRI | GAATTC | 2 cut(s) | 990, 1736 |
| EcoRII | CCWGG | 4 cut(s) | 688, 1534, 1629, 2698 |
| EcoRV | GATATC | 2 cut(s) | 1662, 2446 |
| EcoT14I | CCWWGG | 1 cut(s) | 1168 |
| EcoT22I | ATGCAT | 3 cut(s) | 1105, 1368, 1488 |
| EcoT38I | GRGCYC | 2 cut(s) | 186, 1545 |
| ErhI | CCWWGG | 1 cut(s) | 1168 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 379, 411, 795, 827 |
| FaqI | GGGAC | 2 cut(s) | 845, 1905 |
| FauI | CCCGC | 1 cut(s) | 2589 |
| FauNDI | CATATG | 1 cut(s) | 680 |
| FbaI | TGATCA | 4 cut(s) | 55, 421, 859, 1072 |
| FblI | GTMKAC | 3 cut(s) | 622, 1047, 1581 |
| Fnu4HI | GCNGC | 7 cut(s) | 462, 477, 594, 1555, 1870, 2077, 2311 |
| FokI | GGATG | 7 cut(s) | 504, 518, 1495, 1613, 1702, 2246, 2466 |
| FriOI | GRGCYC | 2 cut(s) | 186, 1545 |
| Fsp4HI | GCNGC | 7 cut(s) | 462, 477, 594, 1555, 1870, 2077, 2311 |
| FspBI | CTAG | 3 cut(s) | 18, 1391, 2789 |
| GlaI | GCGC | 2 cut(s) | 113, 417 |
| GluI | GCNGC | 7 cut(s) | 462, 477, 594, 1555, 1870, 2077, 2311 |
| GsaI | CCCAGC | 2 cut(s) | 839, 2503 |
| GsuI | CTGGAG | 3 cut(s) | 1767, 2645, 2721 |
| HaeIII | GGCC | 7 cut(s) | 496, 688, 979, 1173, 1448, 1634, 2647 |
| HapII | CCGG | 5 cut(s) | 980, 1545, 1636, 2027, 2817 |
| HhaI | GCGC | 2 cut(s) | 114, 418 |
| Hin6I | GCGC | 2 cut(s) | 112, 416 |
| HinP1I | GCGC | 2 cut(s) | 112, 416 |
| HincII | GTYRAC | 3 cut(s) | 1582, 2071, 2575 |
| HindII | GTYRAC | 3 cut(s) | 1582, 2071, 2575 |
| HindIII | AAGCTT | 4 cut(s) | 1077, 1395, 1678, 2150 |
| HpaII | CCGG | 5 cut(s) | 980, 1545, 1636, 2027, 2817 |
| HphI | GGTGA | 7 cut(s) | 50, 413, 731, 859, 1524, 1550, 2554 |
| Hpy166II | GTNNAC | 5 cut(s) | 623, 1048, 1582, 2071, 2575 |
| Hpy8I | GTNNAC | 5 cut(s) | 623, 1048, 1582, 2071, 2575 |
| Hpy99I | CGWCG | 1 cut(s) | 1152 |
| HpyAV | CCTTC | 6 cut(s) | 451, 582, 838, 1184, 1978, 2054 |
| HpyCH4III | ACNGT | 1 cut(s) | 2307 |
| HpyCH4IV | ACGT | 7 cut(s) | 1015, 1150, 1284, 1587, 1894, 2640, 2812 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 413, 675, 808, 1151, 2593 |
| HpyF3I | CTNAG | 7 cut(s) | 89, 185, 289, 370, 1684, 1700, 2672 |
| HpySE526I | ACGT | 7 cut(s) | 1015, 1150, 1284, 1587, 1894, 2640, 2812 |
| HspAI | GCGC | 2 cut(s) | 112, 416 |
| KflI | GGGWCCC | 1 cut(s) | 832 |
| Kpn2I | TCCGGA | 1 cut(s) | 2026 |
| Ksp22I | TGATCA | 4 cut(s) | 55, 421, 859, 1072 |
| KspI | CCGCGG | 1 cut(s) | 2763 |
| LguI | GCTCTTC | 1 cut(s) | 219 |
| LmnI | GCTCC | 3 cut(s) | 1566, 2626, 2702 |
| Lsp1109I | GCAGC | 6 cut(s) | 473, 488, 580, 1566, 2063, 2322 |
| LweI | GCATC | 8 cut(s) | 879, 1294, 1473, 1635, 1881, 2444, 2568, 2834 |
| MabI | ACCWGGT | 1 cut(s) | 1534 |
| MaeI | CTAG | 3 cut(s) | 18, 1391, 2789 |
| MaeII | ACGT | 7 cut(s) | 1015, 1150, 1284, 1587, 1894, 2640, 2812 |
| MaeIII | GTNAC | 1 cut(s) | 1530 |
| MbiI | CCGCTC | 1 cut(s) | 2142 |
| MfeI | CAATTG | 6 cut(s) | 225, 711, 797, 941, 1772, 2241 |
| MflI | RGATCY | 4 cut(s) | 364, 1261, 2272, 2436 |
| MhlI | GDGCHC | 2 cut(s) | 186, 1545 |
| MlyI | GAGTC | 7 cut(s) | 527, 876, 1538, 2246, 2482, 2604, 2729 |
| MmeI | TCCRAC | 7 cut(s) | 403, 960, 1791, 2017, 2152, 2250, 2402 |
| Mph1103I | ATGCAT | 3 cut(s) | 1105, 1368, 1488 |
| MroI | TCCGGA | 1 cut(s) | 2026 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1103, 2853 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1882, 2512 |
| MspA1I | CMGCKG | 2 cut(s) | 2076, 2762 |
| MspI | CCGG | 5 cut(s) | 980, 1545, 1636, 2027, 2817 |
| MunI | CAATTG | 6 cut(s) | 225, 711, 797, 941, 1772, 2241 |
| Mva1269I | GAATGC | 3 cut(s) | 1103, 1105, 1675 |
| MvaI | CCWGG | 4 cut(s) | 690, 1536, 1631, 2700 |
| MvnI | CGCG | 2 cut(s) | 112, 2762 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 413, 675, 808, 1151, 2593 |
| NciI | CCSGG | 6 cut(s) | 981, 1545, 1546, 1636, 1637, 2818 |
| NdeI | CATATG | 1 cut(s) | 680 |
| NlaIV | GGNNCC | 6 cut(s) | 366, 687, 833, 834, 2025, 2781 |
| NmuCI | GTSAC | 1 cut(s) | 1530 |
| NsiI | ATGCAT | 3 cut(s) | 1105, 1368, 1488 |
| NspI | RCATGY | 1 cut(s) | 1920 |
| PagI | TCATGA | 1 cut(s) | 2845 |
| PceI | AGGCCT | 2 cut(s) | 1173, 1448 |
| PciI | ACATGT | 1 cut(s) | 1916 |
| PciSI | GCTCTTC | 1 cut(s) | 219 |
| PctI | GAATGC | 3 cut(s) | 1103, 1105, 1675 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1103, 2853 |
| PfoI | TCCNGGA | 1 cut(s) | 2698 |
| PkrI | GCNGC | 7 cut(s) | 463, 478, 595, 1556, 1871, 2078, 2312 |
| PleI | GAGTC | 7 cut(s) | 526, 875, 1537, 2245, 2482, 2604, 2728 |
| PpsI | GAGTC | 7 cut(s) | 526, 875, 1537, 2245, 2482, 2604, 2728 |
| PpuMI | RGGWCCY | 1 cut(s) | 832 |
| PscI | ACATGT | 1 cut(s) | 1916 |
| Psp1406I | AACGTT | 2 cut(s) | 1015, 1284 |
| Psp5II | RGGWCCY | 1 cut(s) | 832 |
| Psp6I | CCWGG | 4 cut(s) | 688, 1534, 1629, 2698 |
| PspFI | CCCAGC | 2 cut(s) | 835, 2499 |
| PspGI | CCWGG | 4 cut(s) | 688, 1534, 1629, 2698 |
| PspN4I | GGNNCC | 6 cut(s) | 366, 687, 833, 834, 2025, 2781 |
| PspPI | GGNCC | 5 cut(s) | 686, 832, 977, 1118, 1633 |
| PspPPI | RGGWCCY | 1 cut(s) | 832 |
| PstI | CTGCAG | 1 cut(s) | 320 |
| PsuI | RGATCY | 4 cut(s) | 364, 1261, 2272, 2436 |
| RsaI | GTAC | 2 cut(s) | 515, 2815 |
| RsaNI | GTAC | 2 cut(s) | 514, 2814 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1882, 2512 |
| SacII | CCGCGG | 1 cut(s) | 2763 |
| SalI | GTCGAC | 1 cut(s) | 1580 |
| SapI | GCTCTTC | 1 cut(s) | 219 |
| SatI | GCNGC | 7 cut(s) | 462, 477, 594, 1555, 1870, 2077, 2311 |
| Sau96I | GGNCC | 5 cut(s) | 686, 832, 977, 1118, 1633 |
| SchI | GAGTC | 7 cut(s) | 527, 876, 1538, 2246, 2482, 2604, 2729 |
| SduI | GDGCHC | 2 cut(s) | 186, 1545 |
| SexAI | ACCWGGT | 1 cut(s) | 1534 |
| SfaNI | GCATC | 8 cut(s) | 879, 1294, 1473, 1635, 1881, 2444, 2568, 2834 |
| SfcI | CTRYAG | 2 cut(s) | 316, 2432 |
| Sfr303I | CCGCGG | 1 cut(s) | 2763 |
| SgrBI | CCGCGG | 1 cut(s) | 2763 |
| SinI | GGWCC | 2 cut(s) | 832, 1118 |
| SmaI | CCCGGG | 2 cut(s) | 1546, 1637 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1882, 2512 |
| SmlI | CTYRAG | 3 cut(s) | 467, 2153, 2191 |
| SmoI | CTYRAG | 3 cut(s) | 467, 2153, 2191 |
| SpeI | ACTAGT | 1 cut(s) | 17 |
| SseBI | AGGCCT | 2 cut(s) | 1173, 1448 |
| SsiI | CCGC | 8 cut(s) | 1869, 2074, 2140, 2596, 2633, 2717, 2760, 2762 |
| SspI | AATATT | 1 cut(s) | 661 |
| SspMI | CTAG | 3 cut(s) | 18, 1391, 2789 |
| StuI | AGGCCT | 2 cut(s) | 1173, 1448 |
| StyI | CCWWGG | 1 cut(s) | 1168 |
| TaaI | ACNGT | 1 cut(s) | 2307 |
| TaiI | ACGT | 7 cut(s) | 1018, 1153, 1287, 1590, 1897, 2643, 2815 |
| TaqI | TCGA | 9 cut(s) | 97, 236, 347, 531, 1581, 1851, 2360, 2442, 2684 |
| TauI | GCSGC | 1 cut(s) | 1872 |
| TscAI | CASTG | 4 cut(s) | 145, 1422, 2676, 2759 |
| TseFI | GTSAC | 1 cut(s) | 1530 |
| TseI | GCWGC | 6 cut(s) | 461, 476, 593, 1554, 2076, 2310 |
| Tsp45I | GTSAC | 1 cut(s) | 1530 |
| TspGWI | ACGGA | 2 cut(s) | 1791, 2023 |
| TspMI | CCCGGG | 2 cut(s) | 1544, 1635 |
| TspRI | CASTG | 4 cut(s) | 145, 1422, 2676, 2759 |
| VpaK11BI | GGWCC | 2 cut(s) | 832, 1118 |
| XceI | RCATGY | 1 cut(s) | 1920 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 749 |
| XmaI | CCCGGG | 2 cut(s) | 1544, 1635 |
| XmiI | GTMKAC | 3 cut(s) | 622, 1047, 1581 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1103, 2853 |
| XspI | CTAG | 3 cut(s) | 18, 1391, 2789 |
| Zsp2I | ATGCAT | 3 cut(s) | 1105, 1368, 1488 |