TMV resistance protein N-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 2289, 2316 |
| Acc16I | TGCGCA | 1 cut(s) | 2195 |
| AccB1I | GGYRCC | 1 cut(s) | 298 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1897 |
| AccI | GTMKAC | 1 cut(s) | 489 |
| AciI | CCGC | 2 cut(s) | 12, 2417 |
| AclWI | GGATC | 3 cut(s) | 1480, 2271, 2427 |
| AcoI | YGGCCR | 1 cut(s) | 1079 |
| AcsI | RAATTY | 6 cut(s) | 418, 1333, 1357, 1404, 1712, 2393 |
| AcuI | CTGAAG | 1 cut(s) | 1381 |
| AdeI | CACNNNGTG | 1 cut(s) | 593 |
| AfaI | GTAC | 5 cut(s) | 315, 1590, 1877, 2169, 2518 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 219, 1706, 1897, 2163 |
| AflIII | ACRYGT | 4 cut(s) | 310, 1310, 1349, 1585 |
| AgeI | ACCGGT | 1 cut(s) | 283 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 275 |
| AjiI | CACGTC | 1 cut(s) | 1313 |
| AjnI | CCWGG | 3 cut(s) | 381, 609, 1969 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2380, 2412 |
| Alw21I | GWGCWC | 2 cut(s) | 123, 706 |
| Alw26I | GTCTC | 1 cut(s) | 1851 |
| AlwI | GGATC | 3 cut(s) | 1480, 2271, 2427 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1897 |
| Ama87I | CYCGRG | 2 cut(s) | 983, 2142 |
| AoxI | GGCC | 5 cut(s) | 445, 613, 1079, 1223, 2309 |
| ApeKI | GCWGC | 6 cut(s) | 4, 209, 413, 993, 2015, 2099 |
| ApoI | RAATTY | 6 cut(s) | 418, 1333, 1357, 1404, 1712, 2393 |
| AsiGI | ACCGGT | 1 cut(s) | 283 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 774, 1026 |
| AspLEI | GCGC | 2 cut(s) | 332, 2196 |
| AspS9I | GGNCC | 3 cut(s) | 445, 560, 613 |
| AsuC2I | CCSGG | 3 cut(s) | 984, 985, 1951 |
| AsuHPI | GGTGA | 5 cut(s) | 350, 963, 2123, 2360, 2499 |
| AsuII | TTCGAA | 1 cut(s) | 2003 |
| AsuNHI | GCTAGC | 1 cut(s) | 1567 |
| AvaI | CYCGRG | 2 cut(s) | 983, 2142 |
| AvaII | GGWCC | 1 cut(s) | 560 |
| BalI | TGGCCA | 1 cut(s) | 1081 |
| BanI | GGYRCC | 1 cut(s) | 298 |
| BanII | GRGCYC | 2 cut(s) | 123, 706 |
| BbsI | GAAGAC | 2 cut(s) | 184, 1029 |
| Bbv12I | GWGCWC | 2 cut(s) | 123, 706 |
| BbvI | GCAGC | 5 cut(s) | 196, 425, 1005, 2002, 2086 |
| BccI | CCATC | 7 cut(s) | 423, 706, 1090, 1258, 1859, 1912, 2165 |
| BciT130I | CCWGG | 3 cut(s) | 383, 611, 1971 |
| BclI | TGATCA | 3 cut(s) | 358, 1189, 1549 |
| BcnI | CCSGG | 3 cut(s) | 984, 985, 1951 |
| BcoDI | GTCTC | 1 cut(s) | 1851 |
| BfaI | CTAG | 3 cut(s) | 833, 1481, 1568 |
| BfmI | CTRYAG | 1 cut(s) | 810 |
| BfoI | RGCGCY | 1 cut(s) | 333 |
| BisI | GCNGC | 7 cut(s) | 5, 13, 210, 414, 994, 2016, 2100 |
| BlsI | GCNGC | 7 cut(s) | 6, 14, 211, 415, 995, 2017, 2101 |
| BmcAI | AGTACT | 1 cut(s) | 2518 |
| Bme1390I | CCNGG | 6 cut(s) | 383, 611, 984, 985, 1951, 1971 |
| Bme18I | GGWCC | 1 cut(s) | 560 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 275 |
| BmeT110I | CYCGRG | 2 cut(s) | 983, 2142 |
| BmgBI | CACGTC | 1 cut(s) | 1313 |
| BmgT120I | GGNCC | 3 cut(s) | 445, 560, 613 |
| BmiI | GGNNCC | 2 cut(s) | 300, 1994 |
| BmrFI | CCNGG | 6 cut(s) | 383, 611, 984, 985, 1951, 1971 |
| BmsI | GCATC | 4 cut(s) | 400, 736, 912, 1493 |
| BmtI | GCTAGC | 1 cut(s) | 1571 |
| BpiI | GAAGAC | 2 cut(s) | 184, 1029 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 385, 417, 2355, 2387 |
| BpmI | CTGGAG | 2 cut(s) | 1200, 1841 |
| Bpu14I | TTCGAA | 1 cut(s) | 2003 |
| BpuEI | CTTGAG | 3 cut(s) | 199, 1660, 1775 |
| BpuMI | CCSGG | 3 cut(s) | 984, 985, 1951 |
| BsaAI | YACGTR | 1 cut(s) | 1586 |
| BsaJI | CCNNGG | 6 cut(s) | 382, 609, 610, 983, 984, 1076 |
| BsaWI | WCCGGW | 1 cut(s) | 283 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 219, 1706, 1897, 2163 |
| Bse118I | RCCGGY | 1 cut(s) | 283 |
| Bse1I | ACTGG | 4 cut(s) | 240, 1204, 1824, 2514 |
| Bse3DI | GCAATG | 3 cut(s) | 86, 1471, 2344 |
| BseBI | CCWGG | 3 cut(s) | 383, 611, 1971 |
| BseDI | CCNNGG | 6 cut(s) | 382, 609, 610, 983, 984, 1076 |
| BseGI | GGATG | 3 cut(s) | 434, 927, 1878 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 219, 1706, 1897, 2163 |
| BseMI | GCAATG | 3 cut(s) | 86, 1471, 2344 |
| BseMII | CTCAG | 4 cut(s) | 136, 722, 745, 1297 |
| BseNI | ACTGG | 4 cut(s) | 240, 1204, 1824, 2514 |
| BseRI | GAGGAG | 3 cut(s) | 182, 455, 696 |
| BseXI | GCAGC | 5 cut(s) | 196, 425, 1005, 2002, 2086 |
| BsgI | GTGCAG | 1 cut(s) | 1686 |
| BshFI | GGCC | 5 cut(s) | 447, 615, 1081, 1225, 2311 |
| BshNI | GGYRCC | 1 cut(s) | 298 |
| BshTI | ACCGGT | 1 cut(s) | 283 |
| BsiHKAI | GWGCWC | 2 cut(s) | 123, 706 |
| BsiHKCI | CYCGRG | 2 cut(s) | 983, 2142 |
| BsiSI | CCGG | 3 cut(s) | 284, 984, 1951 |
| BslFI | GGGAC | 3 cut(s) | 1058, 1338, 1933 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 219, 1706, 1897, 2163 |
| BsmAI | GTCTC | 1 cut(s) | 1851 |
| BsmFI | GGGAC | 3 cut(s) | 1058, 1338, 1933 |
| BsmI | GAATGC | 5 cut(s) | 31, 257, 545, 1065, 1108 |
| BsnI | GGCC | 5 cut(s) | 447, 615, 1081, 1225, 2311 |
| BsoBI | CYCGRG | 2 cut(s) | 983, 2142 |
| Bsp119I | TTCGAA | 1 cut(s) | 2003 |
| Bsp1286I | GDGCHC | 2 cut(s) | 123, 706 |
| Bsp143I | GATC | 8 cut(s) | 358, 1189, 1485, 1549, 2263, 2293, 2419, 2458 |
| BspACI | CCGC | 2 cut(s) | 12, 2417 |
| BspANI | GGCC | 5 cut(s) | 447, 615, 1081, 1225, 2311 |
| BspCNI | CTCAG | 4 cut(s) | 135, 721, 744, 1296 |
| BspHI | TCATGA | 1 cut(s) | 1552 |
| BspLI | GGNNCC | 2 cut(s) | 300, 1994 |
| BspOI | GCTAGC | 1 cut(s) | 1571 |
| BspPI | GGATC | 3 cut(s) | 1480, 2271, 2427 |
| BspQI | GCTCTTC | 1 cut(s) | 156 |
| BspT104I | TTCGAA | 1 cut(s) | 2003 |
| BspT107I | GGYRCC | 1 cut(s) | 298 |
| BsrDI | GCAATG | 3 cut(s) | 86, 1471, 2344 |
| BsrFI | RCCGGY | 1 cut(s) | 283 |
| BsrI | ACTGG | 4 cut(s) | 240, 1204, 1824, 2514 |
| BssAI | RCCGGY | 1 cut(s) | 283 |
| BssECI | CCNNGG | 6 cut(s) | 382, 609, 610, 983, 984, 1076 |
| BssMI | GATC | 8 cut(s) | 358, 1189, 1485, 1549, 2263, 2293, 2419, 2458 |
| BssNAI | GTATAC | 1 cut(s) | 490 |
| Bst1107I | GTATAC | 1 cut(s) | 490 |
| Bst2UI | CCWGG | 3 cut(s) | 383, 611, 1971 |
| Bst4CI | ACNGT | 4 cut(s) | 774, 859, 1559, 1621 |
| Bst6I | CTCTTC | 2 cut(s) | 121, 156 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 593 |
| BstBAI | YACGTR | 1 cut(s) | 1586 |
| BstBI | TTCGAA | 1 cut(s) | 2003 |
| BstC8I | GCNNGC | 6 cut(s) | 539, 543, 790, 1565, 1569, 2013 |
| BstDEI | CTNAG | 7 cut(s) | 122, 226, 708, 731, 737, 1133, 1283 |
| BstDSI | CCRYGG | 1 cut(s) | 1076 |
| BstF5I | GGATG | 3 cut(s) | 434, 927, 1878 |
| BstH2I | RGCGCY | 1 cut(s) | 333 |
| BstHHI | GCGC | 2 cut(s) | 332, 2196 |
| BstKTI | GATC | 8 cut(s) | 361, 1192, 1488, 1552, 2266, 2296, 2422, 2461 |
| BstMAI | GTCTC | 1 cut(s) | 1851 |
| BstMBI | GATC | 8 cut(s) | 358, 1189, 1485, 1549, 2263, 2293, 2419, 2458 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 97, 593, 755, 1222, 2355 |
| BstNI | CCWGG | 3 cut(s) | 383, 611, 1971 |
| BstNSI | RCATGY | 4 cut(s) | 33, 314, 545, 1353 |
| BstSCI | CCNGG | 6 cut(s) | 381, 609, 982, 983, 1949, 1969 |
| BstSFI | CTRYAG | 1 cut(s) | 810 |
| BstV1I | GCAGC | 5 cut(s) | 196, 425, 1005, 2002, 2086 |
| BstV2I | GAAGAC | 2 cut(s) | 184, 1029 |
| BstX2I | RGATCY | 1 cut(s) | 1485 |
| BstYI | RGATCY | 1 cut(s) | 1485 |
| BstZ17I | GTATAC | 1 cut(s) | 490 |
| BsuRI | GGCC | 5 cut(s) | 447, 615, 1081, 1225, 2311 |
| BtgI | CCRYGG | 1 cut(s) | 1076 |
| BtrI | CACGTC | 1 cut(s) | 1313 |
| BtsCI | GGATG | 3 cut(s) | 434, 927, 1878 |
| BtsIMutI | CAGTG | 5 cut(s) | 864, 1405, 1564, 1817, 2186 |
| Cac8I | GCNNGC | 6 cut(s) | 539, 543, 790, 1565, 1569, 2013 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1897 |
| CciI | TCATGA | 1 cut(s) | 1552 |
| CfoI | GCGC | 2 cut(s) | 332, 2196 |
| Cfr10I | RCCGGY | 1 cut(s) | 283 |
| Cfr13I | GGNCC | 3 cut(s) | 445, 560, 613 |
| Cfr9I | CCCGGG | 1 cut(s) | 983 |
| CseI | GACGC | 1 cut(s) | 350 |
| CsiI | ACCWGGT | 1 cut(s) | 1969 |
| Csp6I | GTAC | 5 cut(s) | 314, 1589, 1876, 2168, 2517 |
| CspAI | ACCGGT | 1 cut(s) | 283 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1058, 1093 |
| CviQI | GTAC | 5 cut(s) | 314, 1589, 1876, 2168, 2517 |
| DdeI | CTNAG | 7 cut(s) | 122, 226, 708, 731, 737, 1133, 1283 |
| DpnI | GATC | 8 cut(s) | 360, 1191, 1487, 1551, 2265, 2295, 2421, 2460 |
| DpnII | GATC | 8 cut(s) | 358, 1189, 1485, 1549, 2263, 2293, 2419, 2458 |
| DraI | TTTAAA | 2 cut(s) | 765, 799 |
| DraIII | CACNNNGTG | 1 cut(s) | 593 |
| DriI | GACNNNNNGTC | 1 cut(s) | 275 |
| EaeI | YGGCCR | 1 cut(s) | 1079 |
| Eam1104I | CTCTTC | 2 cut(s) | 121, 156 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 275 |
| EarI | CTCTTC | 2 cut(s) | 121, 156 |
| EciI | GGCGGA | 1 cut(s) | 2432 |
| Ecl136II | GAGCTC | 2 cut(s) | 121, 704 |
| Eco24I | GRGCYC | 2 cut(s) | 123, 706 |
| Eco32I | GATATC | 1 cut(s) | 1095 |
| Eco47I | GGWCC | 1 cut(s) | 560 |
| Eco53kI | GAGCTC | 2 cut(s) | 121, 704 |
| Eco57I | CTGAAG | 1 cut(s) | 1381 |
| Eco88I | CYCGRG | 2 cut(s) | 983, 2142 |
| EcoICRI | GAGCTC | 2 cut(s) | 121, 704 |
| EcoO109I | RGGNCCY | 1 cut(s) | 613 |
| EcoRI | GAATTC | 1 cut(s) | 1404 |
| EcoRII | CCWGG | 3 cut(s) | 381, 609, 1969 |
| EcoRV | GATATC | 1 cut(s) | 1095 |
| EcoT22I | ATGCAT | 3 cut(s) | 31, 547, 927 |
| EcoT38I | GRGCYC | 2 cut(s) | 123, 706 |
| FaqI | GGGAC | 3 cut(s) | 1058, 1338, 1933 |
| FauNDI | CATATG | 1 cut(s) | 2214 |
| FbaI | TGATCA | 3 cut(s) | 358, 1189, 1549 |
| FblI | GTMKAC | 1 cut(s) | 489 |
| Fnu4HI | GCNGC | 7 cut(s) | 5, 13, 210, 414, 994, 2016, 2100 |
| FokI | GGATG | 3 cut(s) | 441, 934, 1885 |
| FriOI | GRGCYC | 2 cut(s) | 123, 706 |
| Fsp4HI | GCNGC | 7 cut(s) | 5, 13, 210, 414, 994, 2016, 2100 |
| FspBI | CTAG | 3 cut(s) | 833, 1481, 1568 |
| FspI | TGCGCA | 1 cut(s) | 2195 |
| GlaI | GCGC | 2 cut(s) | 331, 2195 |
| GluI | GCNGC | 7 cut(s) | 5, 13, 210, 414, 994, 2016, 2100 |
| GsuI | CTGGAG | 2 cut(s) | 1200, 1841 |
| HaeII | RGCGCY | 1 cut(s) | 333 |
| HaeIII | GGCC | 5 cut(s) | 447, 615, 1081, 1225, 2311 |
| HapII | CCGG | 3 cut(s) | 284, 984, 1951 |
| HgaI | GACGC | 1 cut(s) | 350 |
| HhaI | GCGC | 2 cut(s) | 332, 2196 |
| Hin6I | GCGC | 2 cut(s) | 330, 2194 |
| HinP1I | GCGC | 2 cut(s) | 330, 2194 |
| HincII | GTYRAC | 1 cut(s) | 2481 |
| HindII | GTYRAC | 1 cut(s) | 2481 |
| HindIII | AAGCTT | 2 cut(s) | 1111, 1130 |
| HpaII | CCGG | 3 cut(s) | 284, 984, 1951 |
| HphI | GGTGA | 5 cut(s) | 350, 963, 2123, 2360, 2499 |
| Hpy166II | GTNNAC | 5 cut(s) | 490, 1589, 1720, 2368, 2481 |
| Hpy8I | GTNNAC | 5 cut(s) | 490, 1589, 1720, 2368, 2481 |
| HpyAV | CCTTC | 4 cut(s) | 391, 626, 1595, 1999 |
| HpyCH4III | ACNGT | 4 cut(s) | 774, 859, 1559, 1621 |
| HpyCH4IV | ACGT | 5 cut(s) | 592, 726, 1026, 1312, 1585 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 97, 593, 755, 1222, 2355 |
| HpyF3I | CTNAG | 7 cut(s) | 122, 226, 708, 731, 737, 1133, 1283 |
| HpySE526I | ACGT | 5 cut(s) | 592, 726, 1026, 1312, 1585 |
| HspAI | GCGC | 2 cut(s) | 330, 2194 |
| Ksp22I | TGATCA | 3 cut(s) | 358, 1189, 1549 |
| Kzo9I | GATC | 8 cut(s) | 358, 1189, 1485, 1549, 2263, 2293, 2419, 2458 |
| LguI | GCTCTTC | 1 cut(s) | 156 |
| LmnI | GCTCC | 4 cut(s) | 701, 709, 755, 2008 |
| Lsp1109I | GCAGC | 5 cut(s) | 196, 425, 1005, 2002, 2086 |
| LweI | GCATC | 4 cut(s) | 400, 736, 912, 1493 |
| MabI | ACCWGGT | 1 cut(s) | 1969 |
| MaeI | CTAG | 3 cut(s) | 833, 1481, 1568 |
| MaeII | ACGT | 5 cut(s) | 592, 726, 1026, 1312, 1585 |
| MaeIII | GTNAC | 3 cut(s) | 338, 969, 1470 |
| MalI | GATC | 8 cut(s) | 360, 1191, 1487, 1551, 2265, 2295, 2421, 2460 |
| MboI | GATC | 8 cut(s) | 358, 1189, 1485, 1549, 2263, 2293, 2419, 2458 |
| MflI | RGATCY | 1 cut(s) | 1485 |
| MhlI | GDGCHC | 2 cut(s) | 123, 706 |
| MlsI | TGGCCA | 1 cut(s) | 1081 |
| MluNI | TGGCCA | 1 cut(s) | 1081 |
| MlyI | GAGTC | 7 cut(s) | 115, 179, 870, 977, 1645, 1874, 1903 |
| MmeI | TCCRAC | 1 cut(s) | 1224 |
| Mox20I | TGGCCA | 1 cut(s) | 1081 |
| Mph1103I | ATGCAT | 3 cut(s) | 31, 547, 927 |
| MroXI | GAANNNNTTC | 2 cut(s) | 774, 1026 |
| MscI | TGGCCA | 1 cut(s) | 1081 |
| MseI | TTAA | 7 cut(s) | 764, 798, 1361, 1658, 1724, 1734, 2136 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1315, 1551, 1557, 2093 |
| Msp20I | TGGCCA | 1 cut(s) | 1081 |
| MspI | CCGG | 3 cut(s) | 284, 984, 1951 |
| MspR9I | CCNGG | 6 cut(s) | 383, 611, 984, 985, 1951, 1971 |
| Mva1269I | GAATGC | 5 cut(s) | 31, 257, 545, 1065, 1108 |
| MvaI | CCWGG | 3 cut(s) | 383, 611, 1971 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 97, 593, 755, 1222, 2355 |
| NciI | CCSGG | 3 cut(s) | 984, 985, 1951 |
| NdeI | CATATG | 1 cut(s) | 2214 |
| NdeII | GATC | 8 cut(s) | 358, 1189, 1485, 1549, 2263, 2293, 2419, 2458 |
| NheI | GCTAGC | 1 cut(s) | 1567 |
| NlaIV | GGNNCC | 2 cut(s) | 300, 1994 |
| NmeAIII | GCCGAG | 1 cut(s) | 473 |
| NmuCI | GTSAC | 2 cut(s) | 338, 969 |
| NsbI | TGCGCA | 1 cut(s) | 2195 |
| NsiI | ATGCAT | 3 cut(s) | 31, 547, 927 |
| NspI | RCATGY | 4 cut(s) | 33, 314, 545, 1353 |
| NspV | TTCGAA | 1 cut(s) | 2003 |
| PaeI | GCATGC | 1 cut(s) | 545 |
| PaeR7I | CTCGAG | 1 cut(s) | 2142 |
| PagI | TCATGA | 1 cut(s) | 1552 |
| PasI | CCCWGGG | 1 cut(s) | 610 |
| PciI | ACATGT | 2 cut(s) | 310, 1349 |
| PciSI | GCTCTTC | 1 cut(s) | 156 |
| PctI | GAATGC | 5 cut(s) | 31, 257, 545, 1065, 1108 |
| PdmI | GAANNNNTTC | 2 cut(s) | 774, 1026 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1897 |
| PinAI | ACCGGT | 1 cut(s) | 283 |
| PkrI | GCNGC | 7 cut(s) | 6, 14, 211, 415, 995, 2017, 2101 |
| PleI | GAGTC | 7 cut(s) | 114, 178, 870, 976, 1644, 1873, 1902 |
| PpsI | GAGTC | 7 cut(s) | 114, 178, 870, 976, 1644, 1873, 1902 |
| Ppu21I | YACGTR | 1 cut(s) | 1586 |
| PscI | ACATGT | 2 cut(s) | 310, 1349 |
| PsiI | TTATAA | 2 cut(s) | 2289, 2316 |
| Psp124BI | GAGCTC | 2 cut(s) | 123, 706 |
| Psp6I | CCWGG | 3 cut(s) | 381, 609, 1969 |
| PspGI | CCWGG | 3 cut(s) | 381, 609, 1969 |
| PspN4I | GGNNCC | 2 cut(s) | 300, 1994 |
| PspPI | GGNCC | 3 cut(s) | 445, 560, 613 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1897 |
| PsuI | RGATCY | 1 cut(s) | 1485 |
| RsaI | GTAC | 5 cut(s) | 315, 1590, 1877, 2169, 2518 |
| RsaNI | GTAC | 5 cut(s) | 314, 1589, 1876, 2168, 2517 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1315, 1551, 1557, 2093 |
| SacI | GAGCTC | 2 cut(s) | 123, 706 |
| SapI | GCTCTTC | 1 cut(s) | 156 |
| SaqAI | TTAA | 7 cut(s) | 764, 798, 1361, 1658, 1724, 1734, 2136 |
| SatI | GCNGC | 7 cut(s) | 5, 13, 210, 414, 994, 2016, 2100 |
| Sau3AI | GATC | 8 cut(s) | 358, 1189, 1485, 1549, 2263, 2293, 2419, 2458 |
| Sau96I | GGNCC | 3 cut(s) | 445, 560, 613 |
| ScaI | AGTACT | 1 cut(s) | 2518 |
| SchI | GAGTC | 7 cut(s) | 115, 179, 870, 977, 1645, 1874, 1903 |
| ScrFI | CCNGG | 6 cut(s) | 383, 611, 984, 985, 1951, 1971 |
| SduI | GDGCHC | 2 cut(s) | 123, 706 |
| SexAI | ACCWGGT | 1 cut(s) | 1969 |
| SfaNI | GCATC | 4 cut(s) | 400, 736, 912, 1493 |
| SfcI | CTRYAG | 1 cut(s) | 810 |
| Sfr274I | CTCGAG | 1 cut(s) | 2142 |
| SfuI | TTCGAA | 1 cut(s) | 2003 |
| SinI | GGWCC | 1 cut(s) | 560 |
| SlaI | CTCGAG | 1 cut(s) | 2142 |
| SmaI | CCCGGG | 1 cut(s) | 985 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1315, 1551, 1557, 2093 |
| SmlI | CTYRAG | 4 cut(s) | 214, 1675, 1790, 2142 |
| SmoI | CTYRAG | 4 cut(s) | 214, 1675, 1790, 2142 |
| SphI | GCATGC | 1 cut(s) | 545 |
| SsiI | CCGC | 2 cut(s) | 12, 2417 |
| SspI | AATATT | 3 cut(s) | 458, 1927, 2455 |
| SspMI | CTAG | 3 cut(s) | 833, 1481, 1568 |
| SstI | GAGCTC | 2 cut(s) | 123, 706 |
| StyD4I | CCNGG | 6 cut(s) | 381, 609, 982, 983, 1949, 1969 |
| TaaI | ACNGT | 4 cut(s) | 774, 859, 1559, 1621 |
| TaiI | ACGT | 5 cut(s) | 595, 729, 1029, 1315, 1588 |
| TaqI | TCGA | 7 cut(s) | 199, 438, 1020, 1759, 2003, 2143, 2323 |
| TatI | WGTACW | 3 cut(s) | 1588, 1875, 2516 |
| TauI | GCSGC | 1 cut(s) | 15 |
| Tru1I | TTAA | 7 cut(s) | 764, 798, 1361, 1658, 1724, 1734, 2136 |
| Tru9I | TTAA | 7 cut(s) | 764, 798, 1361, 1658, 1724, 1734, 2136 |
| TscAI | CASTG | 5 cut(s) | 864, 1405, 1564, 1824, 2186 |
| TseFI | GTSAC | 2 cut(s) | 338, 969 |
| TseI | GCWGC | 6 cut(s) | 4, 209, 413, 993, 2015, 2099 |
| Tsp45I | GTSAC | 2 cut(s) | 338, 969 |
| TspGWI | ACGGA | 1 cut(s) | 1224 |
| TspMI | CCCGGG | 1 cut(s) | 983 |
| TspRI | CASTG | 5 cut(s) | 864, 1405, 1564, 1824, 2186 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1897 |
| VpaK11BI | GGWCC | 1 cut(s) | 560 |
| XapI | RAATTY | 6 cut(s) | 418, 1333, 1357, 1404, 1712, 2393 |
| XbaI | TCTAGA | 1 cut(s) | 1480 |
| XceI | RCATGY | 4 cut(s) | 33, 314, 545, 1353 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2214 |
| XhoI | CTCGAG | 1 cut(s) | 2142 |
| XmaI | CCCGGG | 1 cut(s) | 983 |
| XmiI | GTMKAC | 1 cut(s) | 489 |
| XmnI | GAANNNNTTC | 2 cut(s) | 774, 1026 |
| XspI | CTAG | 3 cut(s) | 833, 1481, 1568 |
| ZrmI | AGTACT | 1 cut(s) | 2518 |
| Zsp2I | ATGCAT | 3 cut(s) | 31, 547, 927 |