TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 22 - 186 | 1.1e-51 | TIR domain |
| TIR_2 | PF13676 | 24 - 117 | 3.4e-15 | TIR domain |
| NB-ARC | PF00931 | 203 - 374 | 3.2e-21 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 441 - 513 | 1.9e-16 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 665 - 774 | 1.6e-07 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 698 - 781 | 1.7e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_13 | PF23286 | 842 - 930 | 1.4e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1260 |
| Acc36I | ACCTGC | 1 cut(s) | 3096 |
| AccI | GTMKAC | 3 cut(s) | 798, 1222, 1538 |
| AccII | CGCG | 3 cut(s) | 2519, 2555, 2680 |
| AciI | CCGC | 9 cut(s) | 501, 681, 832, 1411, 1765, 1790, 1807, 2286, 2680 |
| AclI | AACGTT | 1 cut(s) | 890 |
| AclWI | GGATC | 7 cut(s) | 229, 1974, 2007, 2020, 2085, 2094, 3198 |
| AcoI | YGGCCR | 2 cut(s) | 3, 332 |
| AcuI | CTGAAG | 3 cut(s) | 122, 1644, 2391 |
| AdeI | CACNNNGTG | 1 cut(s) | 70 |
| AfaI | GTAC | 3 cut(s) | 125, 382, 654 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 270, 831, 2009, 2359, 3168, 3169, 3447 |
| AflIII | ACRYGT | 1 cut(s) | 3266 |
| AhlI | ACTAGT | 1 cut(s) | 286 |
| AjnI | CCWGG | 3 cut(s) | 1191, 1962, 2071 |
| Alw21I | GWGCWC | 2 cut(s) | 1092, 2883 |
| Alw26I | GTCTC | 2 cut(s) | 2650, 2821 |
| Alw44I | GTGCAC | 1 cut(s) | 2879 |
| AlwI | GGATC | 7 cut(s) | 229, 1974, 2007, 2020, 2085, 2094, 3198 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2477 |
| Ama87I | CYCGRG | 2 cut(s) | 496, 606 |
| AoxI | GGCC | 4 cut(s) | 3, 115, 332, 1056 |
| ApaLI | GTGCAC | 1 cut(s) | 2879 |
| ApeKI | GCWGC | 5 cut(s) | 455, 470, 747, 987, 3202 |
| AseI | ATTAAT | 1 cut(s) | 2106 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 288, 2376 |
| AspLEI | GCGC | 1 cut(s) | 2494 |
| AsuHPI | GGTGA | 6 cut(s) | 401, 437, 1562, 1991, 3284, 3376 |
| AsuII | TTCGAA | 1 cut(s) | 2759 |
| AvaI | CYCGRG | 2 cut(s) | 496, 606 |
| BaeGI | GKGCMC | 1 cut(s) | 2883 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BamHI | GGATCC | 1 cut(s) | 2012 |
| BanII | GRGCYC | 1 cut(s) | 1092 |
| BbsI | GAAGAC | 1 cut(s) | 3354 |
| Bbv12I | GWGCWC | 2 cut(s) | 1092, 2883 |
| BbvI | GCAGC | 5 cut(s) | 467, 482, 734, 999, 3189 |
| BccI | CCATC | 9 cut(s) | 14, 734, 1247, 1304, 1504, 2430, 2794, 2800, 2845 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 1744, 1778, 2665, 2699, 3011, 3045 |
| BciT130I | CCWGG | 3 cut(s) | 1193, 1964, 2073 |
| BciVI | GTATCC | 1 cut(s) | 88 |
| BclI | TGATCA | 2 cut(s) | 1072, 3079 |
| BcoDI | GTCTC | 2 cut(s) | 2650, 2821 |
| BcuI | ACTAGT | 1 cut(s) | 286 |
| BfaI | CTAG | 5 cut(s) | 287, 599, 1397, 1502, 1919 |
| BfmI | CTRYAG | 2 cut(s) | 1521, 1647 |
| BfoI | RGCGCY | 1 cut(s) | 2495 |
| BfuAI | ACCTGC | 1 cut(s) | 3096 |
| BfuI | GTATCC | 1 cut(s) | 88 |
| BglII | AGATCT | 1 cut(s) | 2275 |
| BisI | GCNGC | 8 cut(s) | 456, 471, 748, 833, 988, 2287, 2681, 3203 |
| BlsI | GCNGC | 8 cut(s) | 457, 472, 749, 834, 989, 2288, 2682, 3204 |
| Bme1390I | CCNGG | 3 cut(s) | 1193, 1964, 2073 |
| BmeT110I | CYCGRG | 2 cut(s) | 496, 606 |
| BmiI | GGNNCC | 4 cut(s) | 354, 2014, 2463, 2961 |
| BmrFI | CCNGG | 3 cut(s) | 1193, 1964, 2073 |
| BpiI | GAAGAC | 1 cut(s) | 3354 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 442, 474, 1278, 1310 |
| BpmI | CTGGAG | 3 cut(s) | 2107, 2150, 2845 |
| Bpu14I | TTCGAA | 1 cut(s) | 2759 |
| Bsa29I | ATCGAT | 1 cut(s) | 2524 |
| BsaAI | YACGTR | 1 cut(s) | 950 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1749 |
| BsaJI | CCNNGG | 6 cut(s) | 357, 1059, 1191, 2498, 2708, 3104 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 780, 810, 2818, 2848 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 270, 831, 2009, 2359, 3168, 3169, 3447 |
| Bse118I | RCCGGY | 1 cut(s) | 2718 |
| Bse1I | ACTGG | 9 cut(s) | 131, 1071, 1320, 2090, 2197, 2942, 3166, 3387, 3498 |
| Bse3DI | GCAATG | 2 cut(s) | 1347, 2204 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1749 |
| BseBI | CCWGG | 3 cut(s) | 1193, 1964, 2073 |
| BseCI | ATCGAT | 1 cut(s) | 2524 |
| BseDI | CCNNGG | 6 cut(s) | 357, 1059, 1191, 2498, 2708, 3104 |
| BseJI | GATNNNNATC | 1 cut(s) | 1749 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 270, 831, 2009, 2359, 3168, 3169, 3447 |
| BseMI | GCAATG | 2 cut(s) | 1347, 2204 |
| BseMII | CTCAG | 2 cut(s) | 68, 2927 |
| BseNI | ACTGG | 9 cut(s) | 131, 1071, 1320, 2090, 2197, 2942, 3166, 3387, 3498 |
| BseRI | GAGGAG | 2 cut(s) | 25, 195 |
| BseSI | GKGCMC | 1 cut(s) | 2883 |
| BseXI | GCAGC | 5 cut(s) | 467, 482, 734, 999, 3189 |
| BsgI | GTGCAG | 4 cut(s) | 531, 2104, 3188, 3393 |
| Bsh1236I | CGCG | 3 cut(s) | 2519, 2555, 2680 |
| BshFI | GGCC | 4 cut(s) | 5, 117, 334, 1058 |
| BshVI | ATCGAT | 1 cut(s) | 2524 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1092, 2883 |
| BsiHKCI | CYCGRG | 2 cut(s) | 496, 606 |
| BsiSI | CCGG | 2 cut(s) | 960, 2719 |
| BslFI | GGGAC | 5 cut(s) | 2201, 2542, 3059, 3423, 3440 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 270, 831, 2009, 2359, 3168, 3169, 3447 |
| BsmAI | GTCTC | 2 cut(s) | 2650, 2821 |
| BsmFI | GGGAC | 5 cut(s) | 2201, 2542, 3059, 3423, 3440 |
| BsmI | GAATGC | 2 cut(s) | 1179, 2630 |
| BsnI | GGCC | 4 cut(s) | 5, 117, 334, 1058 |
| BsoBI | CYCGRG | 2 cut(s) | 496, 606 |
| Bsp119I | TTCGAA | 1 cut(s) | 2759 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1092, 2883 |
| BspACI | CCGC | 9 cut(s) | 501, 681, 832, 1411, 1765, 1790, 1807, 2286, 2680 |
| BspANI | GGCC | 4 cut(s) | 5, 117, 334, 1058 |
| BspCNI | CTCAG | 2 cut(s) | 69, 2926 |
| BspDI | ATCGAT | 1 cut(s) | 2524 |
| BspFNI | CGCG | 3 cut(s) | 2519, 2555, 2680 |
| BspHI | TCATGA | 3 cut(s) | 862, 1126, 3400 |
| BspLI | GGNNCC | 4 cut(s) | 354, 2014, 2463, 2961 |
| BspMI | ACCTGC | 1 cut(s) | 3096 |
| BspPI | GGATC | 7 cut(s) | 229, 1974, 2007, 2020, 2085, 2094, 3198 |
| BspQI | GCTCTTC | 1 cut(s) | 1097 |
| BspT104I | TTCGAA | 1 cut(s) | 2759 |
| BsrDI | GCAATG | 2 cut(s) | 1347, 2204 |
| BsrFI | RCCGGY | 1 cut(s) | 2718 |
| BsrI | ACTGG | 9 cut(s) | 131, 1071, 1320, 2090, 2197, 2942, 3166, 3387, 3498 |
| BssAI | RCCGGY | 1 cut(s) | 2718 |
| BssECI | CCNNGG | 6 cut(s) | 357, 1059, 1191, 2498, 2708, 3104 |
| BssT1I | CCWWGG | 3 cut(s) | 2498, 2708, 3104 |
| Bst2UI | CCWGG | 3 cut(s) | 1193, 1964, 2073 |
| Bst4CI | ACNGT | 5 cut(s) | 405, 1327, 1728, 2411, 3006 |
| Bst6I | CTCTTC | 5 cut(s) | 531, 819, 1097, 1500, 2897 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1498 |
| BstBAI | YACGTR | 1 cut(s) | 950 |
| BstBI | TTCGAA | 1 cut(s) | 2759 |
| BstC8I | GCNNGC | 2 cut(s) | 2678, 2883 |
| BstDEI | CTNAG | 6 cut(s) | 77, 913, 1954, 1970, 2913, 3300 |
| BstDSI | CCRYGG | 1 cut(s) | 1059 |
| BstFNI | CGCG | 3 cut(s) | 2519, 2555, 2680 |
| BstH2I | RGCGCY | 1 cut(s) | 2495 |
| BstHHI | GCGC | 1 cut(s) | 2494 |
| BstMAI | GTCTC | 2 cut(s) | 2650, 2821 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 687, 1498, 1552, 2500, 3059, 3253 |
| BstNI | CCWGG | 3 cut(s) | 1193, 1964, 2073 |
| BstNSI | RCATGY | 1 cut(s) | 3270 |
| BstSCI | CCNGG | 3 cut(s) | 1191, 1962, 2071 |
| BstSFI | CTRYAG | 2 cut(s) | 1521, 1647 |
| BstSLI | GKGCMC | 1 cut(s) | 2883 |
| BstUI | CGCG | 3 cut(s) | 2519, 2555, 2680 |
| BstV1I | GCAGC | 5 cut(s) | 467, 482, 734, 999, 3189 |
| BstV2I | GAAGAC | 1 cut(s) | 3354 |
| BstX2I | RGATCY | 4 cut(s) | 1966, 2012, 2090, 2275 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 13, 1066 |
| BstYI | RGATCY | 4 cut(s) | 1966, 2012, 2090, 2275 |
| Bsu15I | ATCGAT | 1 cut(s) | 2524 |
| BsuI | GTATCC | 1 cut(s) | 88 |
| BsuRI | GGCC | 4 cut(s) | 5, 117, 334, 1058 |
| BsuTUI | ATCGAT | 1 cut(s) | 2524 |
| BtgI | CCRYGG | 1 cut(s) | 1059 |
| BtgZI | GCGATG | 1 cut(s) | 2819 |
| BtsIMutI | CAGTG | 5 cut(s) | 1332, 2190, 2475, 3173, 3394 |
| BveI | ACCTGC | 1 cut(s) | 3096 |
| Cac8I | GCNNGC | 2 cut(s) | 2678, 2883 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2477 |
| CciI | TCATGA | 3 cut(s) | 862, 1126, 3400 |
| CfoI | GCGC | 1 cut(s) | 2494 |
| Cfr10I | RCCGGY | 1 cut(s) | 2718 |
| ClaI | ATCGAT | 1 cut(s) | 2524 |
| CseI | GACGC | 3 cut(s) | 2301, 2544, 3236 |
| Csp6I | GTAC | 3 cut(s) | 124, 381, 653 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2343, 2378 |
| CviQI | GTAC | 3 cut(s) | 124, 381, 653 |
| DdeI | CTNAG | 6 cut(s) | 77, 913, 1954, 1970, 2913, 3300 |
| DraI | TTTAAA | 1 cut(s) | 1989 |
| DraIII | CACNNNGTG | 1 cut(s) | 70 |
| EaeI | YGGCCR | 2 cut(s) | 3, 332 |
| Eam1104I | CTCTTC | 5 cut(s) | 531, 819, 1097, 1500, 2897 |
| EarI | CTCTTC | 5 cut(s) | 531, 819, 1097, 1500, 2897 |
| EciI | GGCGGA | 2 cut(s) | 516, 696 |
| Ecl136II | GAGCTC | 1 cut(s) | 1090 |
| Eco130I | CCWWGG | 3 cut(s) | 2498, 2708, 3104 |
| Eco24I | GRGCYC | 1 cut(s) | 1092 |
| Eco32I | GATATC | 1 cut(s) | 2225 |
| Eco53kI | GAGCTC | 1 cut(s) | 1090 |
| Eco57I | CTGAAG | 3 cut(s) | 122, 1644, 2391 |
| Eco88I | CYCGRG | 2 cut(s) | 496, 606 |
| EcoICRI | GAGCTC | 1 cut(s) | 1090 |
| EcoRI | GAATTC | 2 cut(s) | 2480, 2510 |
| EcoRII | CCWGG | 3 cut(s) | 1191, 1962, 2071 |
| EcoRV | GATATC | 1 cut(s) | 2225 |
| EcoT14I | CCWWGG | 3 cut(s) | 2498, 2708, 3104 |
| EcoT22I | ATGCAT | 3 cut(s) | 262, 1494, 2630 |
| EcoT38I | GRGCYC | 1 cut(s) | 1092 |
| ErhI | CCWWGG | 3 cut(s) | 2498, 2708, 3104 |
| FaqI | GGGAC | 5 cut(s) | 2201, 2542, 3059, 3423, 3440 |
| FauI | CCCGC | 1 cut(s) | 1814 |
| FbaI | TGATCA | 2 cut(s) | 1072, 3079 |
| FblI | GTMKAC | 3 cut(s) | 798, 1222, 1538 |
| Fnu4HI | GCNGC | 8 cut(s) | 456, 471, 748, 833, 988, 2287, 2681, 3203 |
| FriOI | GRGCYC | 1 cut(s) | 1092 |
| Fsp4HI | GCNGC | 8 cut(s) | 456, 471, 748, 833, 988, 2287, 2681, 3203 |
| FspBI | CTAG | 5 cut(s) | 287, 599, 1397, 1502, 1919 |
| GlaI | GCGC | 1 cut(s) | 2493 |
| GluI | GCNGC | 8 cut(s) | 456, 471, 748, 833, 988, 2287, 2681, 3203 |
| GsuI | CTGGAG | 3 cut(s) | 2107, 2150, 2845 |
| HaeII | RGCGCY | 1 cut(s) | 2495 |
| HaeIII | GGCC | 4 cut(s) | 5, 117, 334, 1058 |
| HapII | CCGG | 2 cut(s) | 960, 2719 |
| HgaI | GACGC | 3 cut(s) | 2301, 2544, 3236 |
| HhaI | GCGC | 1 cut(s) | 2494 |
| Hin6I | GCGC | 1 cut(s) | 2492 |
| HinP1I | GCGC | 1 cut(s) | 2492 |
| HincII | GTYRAC | 5 cut(s) | 799, 1026, 2032, 2083, 2647 |
| HindII | GTYRAC | 5 cut(s) | 799, 1026, 2032, 2083, 2647 |
| HindIII | AAGCTT | 2 cut(s) | 1544, 2024 |
| HpaII | CCGG | 2 cut(s) | 960, 2719 |
| HphI | GGTGA | 6 cut(s) | 401, 437, 1562, 1991, 3284, 3376 |
| Hpy99I | CGWCG | 2 cut(s) | 2317, 3006 |
| HpyCH4III | ACNGT | 5 cut(s) | 405, 1327, 1728, 2411, 3006 |
| HpyCH4IV | ACGT | 6 cut(s) | 348, 363, 890, 949, 1864, 3351 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 687, 1498, 1552, 2500, 3059, 3253 |
| HpyF3I | CTNAG | 6 cut(s) | 77, 913, 1954, 1970, 2913, 3300 |
| HpySE526I | ACGT | 6 cut(s) | 348, 363, 890, 949, 1864, 3351 |
| HspAI | GCGC | 1 cut(s) | 2492 |
| Ksp22I | TGATCA | 2 cut(s) | 1072, 3079 |
| LguI | GCTCTTC | 1 cut(s) | 1097 |
| LmnI | GCTCC | 4 cut(s) | 17, 962, 2461, 2779 |
| Lsp1109I | GCAGC | 5 cut(s) | 467, 482, 734, 999, 3189 |
| MaeI | CTAG | 5 cut(s) | 287, 599, 1397, 1502, 1919 |
| MaeII | ACGT | 6 cut(s) | 348, 363, 890, 949, 1864, 3351 |
| MaeIII | GTNAC | 4 cut(s) | 425, 1406, 1767, 2411 |
| MfeI | CAATTG | 4 cut(s) | 11, 699, 723, 1975 |
| MflI | RGATCY | 4 cut(s) | 1966, 2012, 2090, 2275 |
| MhlI | GDGCHC | 2 cut(s) | 1092, 2883 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 8 cut(s) | 596, 1544, 2375, 2408, 2652, 2823, 2895, 3282 |
| MmeI | TCCRAC | 3 cut(s) | 1990, 2405, 2703 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| Mph1103I | ATGCAT | 3 cut(s) | 262, 1494, 2630 |
| MroXI | GAANNNNTTC | 2 cut(s) | 288, 2376 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MslI | CAYNNNNRTG | 5 cut(s) | 434, 1131, 1215, 1578, 3135 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspA1I | CMGCKG | 1 cut(s) | 2976 |
| MspI | CCGG | 2 cut(s) | 960, 2719 |
| MspR9I | CCNGG | 3 cut(s) | 1193, 1964, 2073 |
| MunI | CAATTG | 4 cut(s) | 11, 699, 723, 1975 |
| Mva1269I | GAATGC | 2 cut(s) | 1179, 2630 |
| MvaI | CCWGG | 3 cut(s) | 1193, 1964, 2073 |
| MvnI | CGCG | 3 cut(s) | 2519, 2555, 2680 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 687, 1498, 1552, 2500, 3059, 3253 |
| NlaIV | GGNNCC | 4 cut(s) | 354, 2014, 2463, 2961 |
| NmeAIII | GCCGAG | 1 cut(s) | 1507 |
| NmuCI | GTSAC | 3 cut(s) | 425, 1406, 2411 |
| NsiI | ATGCAT | 3 cut(s) | 262, 1494, 2630 |
| NspI | RCATGY | 1 cut(s) | 3270 |
| NspV | TTCGAA | 1 cut(s) | 2759 |
| PagI | TCATGA | 3 cut(s) | 862, 1126, 3400 |
| PciI | ACATGT | 1 cut(s) | 3266 |
| PciSI | GCTCTTC | 1 cut(s) | 1097 |
| PctI | GAATGC | 2 cut(s) | 1179, 2630 |
| PdmI | GAANNNNTTC | 2 cut(s) | 288, 2376 |
| PfeI | GAWTC | 9 cut(s) | 147, 417, 1669, 1756, 1825, 2038, 2349, 2713, 2789 |
| PflFI | GACNNNGTC | 1 cut(s) | 2832 |
| PfoI | TCCNGGA | 1 cut(s) | 1962 |
| PkrI | GCNGC | 8 cut(s) | 457, 472, 749, 834, 989, 2288, 2682, 3204 |
| PleI | GAGTC | 8 cut(s) | 596, 1543, 2374, 2408, 2652, 2823, 2895, 3281 |
| PpsI | GAGTC | 8 cut(s) | 596, 1543, 2374, 2408, 2652, 2823, 2895, 3281 |
| Ppu21I | YACGTR | 1 cut(s) | 950 |
| PscI | ACATGT | 1 cut(s) | 3266 |
| PshBI | ATTAAT | 1 cut(s) | 2106 |
| PsiI | TTATAA | 1 cut(s) | 1260 |
| Psp124BI | GAGCTC | 1 cut(s) | 1092 |
| Psp1406I | AACGTT | 1 cut(s) | 890 |
| Psp6I | CCWGG | 3 cut(s) | 1191, 1962, 2071 |
| PspGI | CCWGG | 3 cut(s) | 1191, 1962, 2071 |
| PspN4I | GGNNCC | 4 cut(s) | 354, 2014, 2463, 2961 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2477 |
| PsuI | RGATCY | 4 cut(s) | 1966, 2012, 2090, 2275 |
| PsyI | GACNNNGTC | 1 cut(s) | 2832 |
| PvuII | CAGCTG | 1 cut(s) | 2976 |
| RsaI | GTAC | 3 cut(s) | 125, 382, 654 |
| RsaNI | GTAC | 3 cut(s) | 124, 381, 653 |
| RseI | CAYNNNNRTG | 5 cut(s) | 434, 1131, 1215, 1578, 3135 |
| SacI | GAGCTC | 1 cut(s) | 1092 |
| SalI | GTCGAC | 1 cut(s) | 797 |
| SapI | GCTCTTC | 1 cut(s) | 1097 |
| SatI | GCNGC | 8 cut(s) | 456, 471, 748, 833, 988, 2287, 2681, 3203 |
| SchI | GAGTC | 8 cut(s) | 596, 1544, 2375, 2408, 2652, 2823, 2895, 3282 |
| ScrFI | CCNGG | 3 cut(s) | 1193, 1964, 2073 |
| SduI | GDGCHC | 2 cut(s) | 1092, 2883 |
| SfcI | CTRYAG | 2 cut(s) | 1521, 1647 |
| SfuI | TTCGAA | 1 cut(s) | 2759 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 434, 1131, 1215, 1578, 3135 |
| SpeI | ACTAGT | 1 cut(s) | 286 |
| SsiI | CCGC | 9 cut(s) | 501, 681, 832, 1411, 1765, 1790, 1807, 2286, 2680 |
| SspI | AATATT | 2 cut(s) | 773, 2542 |
| SspMI | CTAG | 5 cut(s) | 287, 599, 1397, 1502, 1919 |
| SstI | GAGCTC | 1 cut(s) | 1092 |
| StyD4I | CCNGG | 3 cut(s) | 1191, 1962, 2071 |
| StyI | CCWWGG | 3 cut(s) | 2498, 2708, 3104 |
| TaaI | ACNGT | 5 cut(s) | 405, 1327, 1728, 2411, 3006 |
| TaiI | ACGT | 6 cut(s) | 351, 366, 893, 952, 1867, 3354 |
| TatI | WGTACW | 1 cut(s) | 123 |
| TauI | GCSGC | 3 cut(s) | 835, 2289, 2683 |
| TfiI | GAWTC | 9 cut(s) | 147, 417, 1669, 1756, 1825, 2038, 2349, 2713, 2789 |
| TscAI | CASTG | 5 cut(s) | 1332, 2197, 2482, 3173, 3394 |
| TseFI | GTSAC | 3 cut(s) | 425, 1406, 2411 |
| TseI | GCWGC | 5 cut(s) | 455, 470, 747, 987, 3202 |
| Tsp45I | GTSAC | 3 cut(s) | 425, 1406, 2411 |
| TspGWI | ACGGA | 4 cut(s) | 1076, 1173, 3240, 3359 |
| TspRI | CASTG | 5 cut(s) | 1332, 2197, 2482, 3173, 3394 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2832 |
| VneI | GTGCAC | 1 cut(s) | 2879 |
| VspI | ATTAAT | 1 cut(s) | 2106 |
| XceI | RCATGY | 1 cut(s) | 3270 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 274, 737 |
| XmiI | GTMKAC | 3 cut(s) | 798, 1222, 1538 |
| XmnI | GAANNNNTTC | 2 cut(s) | 288, 2376 |
| XspI | CTAG | 5 cut(s) | 287, 599, 1397, 1502, 1919 |
| Zsp2I | ATGCAT | 3 cut(s) | 262, 1494, 2630 |