Rw7G042090

Glutamyl endopeptidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0002809
Physical Location & Seq
Reverse (-)
65776017 .. 65780706
4690 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G042090.1

Sequence Viewer

Length: 2895 bp
ATGAGCGATAGGATGCTCCATCTTCAAAAAGTCTATCATCGCCTATCTCTTCGCTCCTTCACTCCACACTCCCTCCCTTTCAAACCCCCCCAATTCCCATCCCTCCGTTCGCCTCCGCGCCTCCGTGTGCGGCCGCGAAGCCACGCCGTCAGGTCCATCGGAACCGCCGCCGCCGTCATGTCTGCTAGCGCTAGCTCGAGGCTCAGCAACATCGTCCCCCTCAACGCCGTCGTTGCCGAGGACGGCGGCAACGGTTCCGTCTCTTCTGCCACTGCTACTACATTTGAAGATGAAGAAGATTCCACGTTGGGATATCGTCTTCCTCCGAAGGAAATTAAAGATATAGTTGATGCTCCGCCGCTTCCGGCCTTGTCATTCTCGCCGTACAGGGATAAGATACTGTTTCTGAAGCGGAGAGCTTTGCCGCCGTTGACAGAACTTGCAAGACCAGAGGAGAAGCTTGCTGGTGTTCGGATTGATGGGAAATGCAATACAAGGACTCGGATGTCGTTTTATACTGGGATTGGGATCCATCAATTGCTGCCGGATGGTACTCTTGGTTCCGAAGTTGAGGTGCATGGATTCCCTGAGGGTGCTAAGATCAATTTTGTTACTTGGTCCCCAGATGGTCGCCATTTGGCCTTCACTATTCGATTTGATGATGAAGATACTAGTAGTAAGCTTAAAGTGTGGGTTGCTCAAGTGGAAACCGGGGCAGCCAGGCCTTTGTTTGAGTCGCATGAATACTGTTTGAATGCGGTTTTTGACAATTTTGTTTGGGTGAACGACTCTTCTTTGTTAGTTTGCACCATTCCTCTGTCCCGTGGAGACCCGCCAAAGAAACCTTTGGTGCCTTTTGGGCCTAAAATTCAATCTAACGAGCAGAAAAACATTATTCAGGTTAGGACCTTCCAGGATTTGCTGAAGGATGAATATGATGAAGATTTGTTTGATTACTATGCCACCTCACAGCTTGTTTTAGCTTCTTTGGATGGCATGGTGAAGGAAATTGGTCCACTGGCTGTATATACATCAATGGATCCCTCCCCAGATCACAAATACCTTTTAATTAGTTCACTTCACAGACCATACTCTTTCATTGTACCATGCGGAAGATTTCCCAAAAAGGAAGAAATGTGGACAGCTGATGGGAAGTTTGTAAGAGAACTTTGTGATTTGCCTCTTGCCGAGGACATCCCCATTGCATTCAATAGTGTGCGAAGAGGGATGCGCTCTCTCAACTGGAGAGCGGATAAACCATCAACACTCTACTGGGTTGAGACCCAAGATGGAGGAGATGCAAAAGTGGAAGTTTCTCCACGTGATATTGTTTATACACAGCCTGCTGAACCACTAGAAGGTGAAGATCCAACAATCTTACACAAACTCGATCTCCGTTATGGAGGGATTTCTTGGTCTGATGATTCACTAGCTCTAGTTTACGAGTCATGGTACAAAACACGGAGAACAAGAACCTGGGTAATTTCTCCTGGATCAAATGATGTCAGTCCCCGCATCCTGTTTGATAGGTCATCGGAAGATGTGTACTCCGATCCTGGCTCCCCCATGCTGCGGAGAACTCCTGCTGGCACATATGTGCTTGCAAAACTGAAGAAAGAAAATGATGAAGGCACTTATTTACTACTGAATGGAAATGGTGCTACACCAGAGGGGAATATCCCATTCCTCGATTTGTTTGACATAAATACAGGAAATAAAGAACGAATATGGAAGAGTGACAAAGAAAAGTATTATGAGGGTGTTGTTGCTTTAATGTCTGATGAGAAAGAAGGAGATCTTCCCATCAATACCTTGAAAATATTGACTTCCAAAGAGTCAAAAACTGAAAACACCCAATATTATATCCTAAGCTGGCCGGAAAAGAAAGCTTGTCAAATTACAAATTTCCCTCATCCGTATCCACAGCTGGCATCGTTGCAGAAAGAGATGGTCAGGTACCAGAGAAAGGATGGGGTTCAACTAACTGCAACACTATATCTTCCACCAGGCTACGATCCATCCAGAGATGGCCCTCTTCCATGTTTGGTTTGGTCTTACCCTGGAGAATTCAAAAGCAAAGATGCTGCTGGACAAGTTCGTGGTTCTCCTAATGAATTTGCTGGGATAGGTCCAACATCAGCCCTGCTCTGGATGGCTCGAAGGTTTGCTATTTTATCTGGACCAACTATTCCTATTATTGGTGAGGGTGATGATGAAGCAAATGATAGGTATGTGGAGCAATTGGTTGCAAGTGCAGAGGCTGCTGTGGAGGAAGTTATTCGACGTGGAGTGGCTCATCCAAAGAAAATTGCTGTTGGGGGACATTCATATGGGGCATTCATGACTGCAAACCTACTGGCACATGCTCCTCATCTTTTTGCTTGTGGAATTGCTCGTTCGGGTGCTTACAATAGAACACTTACTCCTTTTGGTTTTCAGAACGAGGAAAGAACTCTTTGGGAGGCTACTAGTACTTATGTGGAGATGAGTCCTTTCATGTCTGCTAATAAAATTAAGAAGCCAATCTTGCTTATCCATGGAGAGGAAGACAATAATCCAGGGACTTTAACCATGCAGTCGGATCGTTTCTTTAATGCTCTGAAAGGTCATGGTGCTCTTTGCCGTCTTGTGATTCTTCCCTTTGAGAGCCATGGCTATGCGGCAAGAGAGAGTATCATGCATGTGCTATGGGAAACTGACAGGTGGTTGCAAAAATATTGCGTGTCAGACACTTCTGATGTAAATGTTGATCAAGATGCATGTAAAGACAATATAGGCACACAATCTACAAATTCTGAAAGCAAAGCAGTGGCTACTGGTGGAGGCAGTGGCTCAGAATTGTCAAGTTTTGAGCATGAAGGAGTTGACTCTTTGCCTAGGTCATTATTATGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_S9

Protein Analysis

964

Amino Acids

107.46

Weight (kDa)

5.82

Isoelectric Point (pI)

47.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S9 PF00326 753 - 906 2.2e-22 Prolyl oligopeptidase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 505
Acc65I GGTACC 1 cut(s) 1956
AccB1I GGYRCC 2 cut(s) 850, 1956
AccBSI CCGCTC 1 cut(s) 1250
AccII CGCG 2 cut(s) 118, 136
AclWI GGATC 9 cut(s) 523, 536, 1034, 1047, 1361, 1501, 1547, 2009, 2589
AcoI YGGCCR 2 cut(s) 131, 1874
AcsI RAATTY 5 cut(s) 867, 1903, 2066, 2114, 2791
AcuI CTGAAG 3 cut(s) 428, 944, 1631
AcvI CACGTG 1 cut(s) 1322
AfaI GTAC 7 cut(s) 386, 553, 1104, 1454, 1547, 1958, 2473
AfeI AGCGCT 1 cut(s) 190
AfiI CCNNNNNNNGG 6 cut(s) 1358, 1572, 1966, 2148, 2198, 2542
AgsI TTSAA 9 cut(s) 26, 82, 287, 754, 872, 1210, 1816, 1979, 2071
AhlI ACTAGT 2 cut(s) 671, 2468
AjiI CACGTC 1 cut(s) 2285
AjnI CCWGG 8 cut(s) 719, 912, 1475, 1489, 1555, 2005, 2059, 2557
AleI CACNNNNGTG 1 cut(s) 1595
AloI GAACNNNNNNTCC 2 cut(s) 2407, 2439
Alw21I GWGCWC 1 cut(s) 2617
Alw26I GTCTC 3 cut(s) 265, 822, 1274
AlwI GGATC 9 cut(s) 523, 536, 1034, 1047, 1361, 1501, 1547, 2009, 2589
AlwNI CAGNNNCTG 1 cut(s) 2261
Ama87I CYCGRG 1 cut(s) 196
Aor51HI AGCGCT 1 cut(s) 190
AoxI GGCC 7 cut(s) 131, 366, 639, 722, 860, 1874, 2029
ApeKI GCWGC 5 cut(s) 541, 716, 1570, 2084, 2261
ApoI RAATTY 5 cut(s) 867, 1903, 2066, 2114, 2791
Asp700I GAANNNNTTC 1 cut(s) 2277
Asp718I GGTACC 1 cut(s) 1956
AspA2I CCTAGG 1 cut(s) 2876
AspLEI GCGC 3 cut(s) 120, 191, 1233
AspS9I GGNCC 8 cut(s) 153, 618, 860, 906, 1013, 2030, 2129, 2180
AsuC2I CCSGG 1 cut(s) 712
AsuHPI GGTGA 5 cut(s) 793, 1012, 1373, 2213, 2219
AsuNHI GCTAGC 2 cut(s) 185, 191
AvaI CYCGRG 1 cut(s) 196
AvaII GGWCC 6 cut(s) 153, 618, 906, 1013, 2129, 2180
AvrII CCTAGG 1 cut(s) 2876
AxyI CCTNAGG 1 cut(s) 588
BamHI GGATCC 2 cut(s) 528, 1039
BanI GGYRCC 2 cut(s) 850, 1956
BbrPI CACGTG 1 cut(s) 1322
BbsI GAAGAC 2 cut(s) 311, 2553
Bbv12I GWGCWC 1 cut(s) 2617
BbvI GCAGC 5 cut(s) 528, 728, 1557, 2071, 2248
BceAI ACGGC 7 cut(s) 131, 158, 212, 259, 367, 412, 2607
BcgI CGANNNNNNTGC 2 cut(s) 2564, 2598
BciT130I CCWGG 8 cut(s) 721, 914, 1477, 1491, 1557, 2007, 2061, 2559
BciVI GTATCC 1 cut(s) 1929
BclI TGATCA 1 cut(s) 2749
BcnI CCSGG 1 cut(s) 712
BcoDI GTCTC 3 cut(s) 265, 822, 1274
BcuI ACTAGT 2 cut(s) 671, 2468
BfaI CTAG 8 cut(s) 186, 192, 672, 1355, 1430, 1436, 2469, 2877
BfoI RGCGCY 1 cut(s) 192
BfuI GTATCC 1 cut(s) 1929
BglI GCCNNNNNGGC 1 cut(s) 859
BglII AGATCT 1 cut(s) 1795
BlnI CCTAGG 1 cut(s) 2876
BlpI GCTNAGC 1 cut(s) 203
BmcAI AGTACT 1 cut(s) 2473
Bme1390I CCNGG 9 cut(s) 712, 721, 914, 1477, 1491, 1557, 2007, 2061, 2559
Bme18I GGWCC 6 cut(s) 153, 618, 906, 1013, 2129, 2180
BmeT110I CYCGRG 1 cut(s) 196
BmgBI CACGTC 1 cut(s) 2285
BmgT120I GGNCC 8 cut(s) 153, 618, 860, 906, 1013, 2030, 2129, 2180
BmiI GGNNCC 9 cut(s) 163, 256, 530, 562, 620, 852, 1041, 1561, 1958
BmrFI CCNGG 9 cut(s) 712, 721, 914, 1477, 1491, 1557, 2007, 2061, 2559
BmrI ACTGGG 2 cut(s) 528, 1282
BmsI GCATC 8 cut(s) 3, 340, 1218, 1288, 1524, 1940, 2071, 2746
BmtI GCTAGC 2 cut(s) 189, 195
BmuI ACTGGG 2 cut(s) 528, 1282
BpiI GAAGAC 2 cut(s) 311, 2553
BpmI CTGGAG 2 cut(s) 1264, 2082
Bpu10I CCTNAGC 1 cut(s) 1868
Bpu1102I GCTNAGC 1 cut(s) 203
BpuEI CTTGAG 1 cut(s) 684
BpuMI CCSGG 1 cut(s) 712
BsaAI YACGTR 1 cut(s) 1322
BsaBI GATNNNNATC 1 cut(s) 527
BsaI GGTCTC 2 cut(s) 822, 1274
BsaXI ACNNNNNCTCC 6 cut(s) 57, 87, 1377, 1407, 2407, 2437
Bsc4I CCNNNNNNNGG 6 cut(s) 1358, 1572, 1966, 2148, 2198, 2542
Bse1I ACTGG 6 cut(s) 523, 1023, 1247, 1277, 2361, 2821
Bse21I CCTNAGG 1 cut(s) 588
Bse3DI GCAATG 1 cut(s) 1200
Bse8I GATNNNNATC 1 cut(s) 527
BseBI CCWGG 8 cut(s) 721, 914, 1477, 1491, 1557, 2007, 2061, 2559
BseJI GATNNNNATC 1 cut(s) 527
BseLI CCNNNNNNNGG 6 cut(s) 1358, 1572, 1966, 2148, 2198, 2542
BseMI GCAATG 1 cut(s) 1200
BseMII CTCAG 3 cut(s) 217, 579, 2847
BseNI ACTGG 6 cut(s) 523, 1023, 1247, 1277, 2361, 2821
BseRI GAGGAG 3 cut(s) 467, 1308, 2358
BseX3I CGGCCG 1 cut(s) 131
BseXI GCAGC 5 cut(s) 528, 728, 1557, 2071, 2248
BseYI CCCAGC 1 cut(s) 2120
BsgI GTGCAG 1 cut(s) 2274
Bsh1236I CGCG 2 cut(s) 118, 136
Bsh1285I CGRYCG 1 cut(s) 134
BshFI GGCC 7 cut(s) 133, 368, 641, 724, 862, 1876, 2031
BshNI GGYRCC 2 cut(s) 850, 1956
BsiEI CGRYCG 1 cut(s) 134
BsiHKAI GWGCWC 1 cut(s) 2617
BsiHKCI CYCGRG 1 cut(s) 196
BsiSI CCGG 4 cut(s) 365, 545, 711, 1877
BslFI GGGAC 6 cut(s) 200, 604, 805, 1494, 2334, 2575
BslI CCNNNNNNNGG 6 cut(s) 1358, 1572, 1966, 2148, 2198, 2542
BsmAI GTCTC 3 cut(s) 265, 822, 1274
BsmBI CGTCTC 1 cut(s) 265
BsmFI GGGAC 6 cut(s) 200, 604, 805, 1494, 2334, 2575
BsmI GAATGC 3 cut(s) 760, 1205, 2336
BsnI GGCC 7 cut(s) 133, 368, 641, 724, 862, 1876, 2031
Bso31I GGTCTC 2 cut(s) 822, 1274
BsoBI CYCGRG 1 cut(s) 196
Bsp1286I GDGCHC 1 cut(s) 2617
Bsp1720I GCTNAGC 1 cut(s) 203
Bsp19I CCATGG 2 cut(s) 2536, 2650
BspANI GGCC 7 cut(s) 133, 368, 641, 724, 862, 1876, 2031
BspCNI CTCAG 3 cut(s) 216, 580, 2846
BspFNI CGCG 2 cut(s) 118, 136
BspHI TCATGA 1 cut(s) 2340
BspLI GGNNCC 9 cut(s) 163, 256, 530, 562, 620, 852, 1041, 1561, 1958
BspOI GCTAGC 2 cut(s) 189, 195
BspPI GGATC 9 cut(s) 523, 536, 1034, 1047, 1361, 1501, 1547, 2009, 2589
BspT107I GGYRCC 2 cut(s) 850, 1956
BspTNI GGTCTC 2 cut(s) 822, 1274
BsrBI CCGCTC 1 cut(s) 1250
BsrDI GCAATG 1 cut(s) 1200
BsrI ACTGG 6 cut(s) 523, 1023, 1247, 1277, 2361, 2821
BssT1I CCWWGG 3 cut(s) 2536, 2650, 2876
Bst2UI CCWGG 8 cut(s) 721, 914, 1477, 1491, 1557, 2007, 2061, 2559
Bst4CI ACNGT 3 cut(s) 254, 402, 749
Bst6I CTCTTC 6 cut(s) 54, 268, 796, 1216, 1727, 2040
BstAPI GCANNNNNTGC 1 cut(s) 2261
BstBAI YACGTR 1 cut(s) 1322
BstC8I GCNNGC 8 cut(s) 187, 193, 462, 1344, 1588, 1602, 1874, 1929
BstDEI CTNAG 5 cut(s) 203, 588, 597, 1868, 2833
BstDSI CCRYGG 3 cut(s) 823, 2536, 2650
BstFNI CGCG 2 cut(s) 118, 136
BstH2I RGCGCY 1 cut(s) 192
BstHHI GCGC 3 cut(s) 120, 191, 1233
BstMAI GTCTC 3 cut(s) 265, 822, 1274
BstMCI CGRYCG 1 cut(s) 134
BstMWI GCNNNNNNNGC 4 cut(s) 233, 859, 2261, 2527
BstNI CCWGG 8 cut(s) 721, 914, 1477, 1491, 1557, 2007, 2061, 2559
BstNSI RCATGY 3 cut(s) 2366, 2684, 2763
BstSCI CCNGG 9 cut(s) 710, 719, 912, 1475, 1489, 1555, 2005, 2059, 2557
BstUI CGCG 2 cut(s) 118, 136
BstV1I GCAGC 5 cut(s) 528, 728, 1557, 2071, 2248
BstV2I GAAGAC 2 cut(s) 311, 2553
BstX2I RGATCY 4 cut(s) 528, 1039, 1366, 1795
BstYI RGATCY 4 cut(s) 528, 1039, 1366, 1795
BstZI CGGCCG 1 cut(s) 131
Bsu36I CCTNAGG 1 cut(s) 588
BsuI GTATCC 1 cut(s) 1929
BsuRI GGCC 7 cut(s) 133, 368, 641, 724, 862, 1876, 2031
BtgI CCRYGG 3 cut(s) 823, 2536, 2650
BtgZI GCGATG 1 cut(s) 23
BtrI CACGTC 1 cut(s) 2285
BtsI GCAGTG 3 cut(s) 270, 2814, 2833
BtsIMutI CAGTG 4 cut(s) 270, 1016, 2814, 2833
Cac8I GCNNGC 8 cut(s) 187, 193, 462, 1344, 1588, 1602, 1874, 1929
CaiI CAGNNNCTG 1 cut(s) 2261
CciI TCATGA 1 cut(s) 2340
CciNI GCGGCCGC 1 cut(s) 131
CfoI GCGC 3 cut(s) 120, 191, 1233
Cfr13I GGNCC 8 cut(s) 153, 618, 860, 906, 1013, 2030, 2129, 2180
Csp6I GTAC 7 cut(s) 385, 552, 1103, 1453, 1546, 1957, 2472
CviQI GTAC 7 cut(s) 385, 552, 1103, 1453, 1546, 1957, 2472
DdeI CTNAG 5 cut(s) 203, 588, 597, 1868, 2833
DrdI GACNNNNNNGTC 1 cut(s) 505
DseDI GACNNNNNNGTC 1 cut(s) 505
EaeI YGGCCR 2 cut(s) 131, 1874
EagI CGGCCG 1 cut(s) 131
Eam1104I CTCTTC 6 cut(s) 54, 268, 796, 1216, 1727, 2040
EarI CTCTTC 6 cut(s) 54, 268, 796, 1216, 1727, 2040
EciI GGCGGA 1 cut(s) 345
EclXI CGGCCG 1 cut(s) 131
Eco130I CCWWGG 3 cut(s) 2536, 2650, 2876
Eco147I AGGCCT 1 cut(s) 724
Eco31I GGTCTC 2 cut(s) 822, 1274
Eco32I GATATC 1 cut(s) 314
Eco47I GGWCC 6 cut(s) 153, 618, 906, 1013, 2129, 2180
Eco47III AGCGCT 1 cut(s) 190
Eco52I CGGCCG 1 cut(s) 131
Eco57I CTGAAG 3 cut(s) 428, 944, 1631
Eco72I CACGTG 1 cut(s) 1322
Eco81I CCTNAGG 1 cut(s) 588
Eco88I CYCGRG 1 cut(s) 196
EcoO109I RGGNCCY 1 cut(s) 906
EcoRI GAATTC 1 cut(s) 2066
EcoRII CCWGG 8 cut(s) 719, 912, 1475, 1489, 1555, 2005, 2059, 2557
EcoRV GATATC 1 cut(s) 314
EcoT14I CCWWGG 3 cut(s) 2536, 2650, 2876
EcoT22I ATGCAT 2 cut(s) 2682, 2761
ErhI CCWWGG 3 cut(s) 2536, 2650, 2876
Esp3I CGTCTC 1 cut(s) 265
FalI AAGNNNNNCTT 4 cut(s) 1782, 1814, 2510, 2542
FaqI GGGAC 6 cut(s) 200, 604, 805, 1494, 2334, 2575
FauI CCCGC 2 cut(s) 840, 1520
FauNDI CATATG 2 cut(s) 1594, 2329
FbaI TGATCA 1 cut(s) 2749
FspBI CTAG 8 cut(s) 186, 192, 672, 1355, 1430, 1436, 2469, 2877
GlaI GCGC 3 cut(s) 119, 190, 1232
GsaI CCCAGC 1 cut(s) 2124
GsuI CTGGAG 2 cut(s) 1264, 2082
HaeII RGCGCY 1 cut(s) 192
HaeIII GGCC 7 cut(s) 133, 368, 641, 724, 862, 1876, 2031
HapII CCGG 4 cut(s) 365, 545, 711, 1877
HhaI GCGC 3 cut(s) 120, 191, 1233
Hin6I GCGC 3 cut(s) 118, 189, 1231
HinP1I GCGC 3 cut(s) 118, 189, 1231
HincII GTYRAC 2 cut(s) 432, 2866
HindII GTYRAC 2 cut(s) 432, 2866
HindIII AAGCTT 3 cut(s) 458, 680, 1887
HpaII CCGG 4 cut(s) 365, 545, 711, 1877
HphI GGTGA 5 cut(s) 793, 1012, 1373, 2213, 2219
Hpy166II GTNNAC 8 cut(s) 432, 784, 1016, 1076, 1140, 1441, 1546, 2866
Hpy188III TCNNGA 5 cut(s) 2022, 2149, 2178, 2341, 2753
Hpy8I GTNNAC 8 cut(s) 432, 784, 1016, 1076, 1140, 1441, 1546, 2866
Hpy99I CGWCG 2 cut(s) 233, 2286
HpyCH4III ACNGT 3 cut(s) 254, 402, 749
HpyCH4IV ACGT 3 cut(s) 305, 1321, 2284
HpyF10VI GCNNNNNNNGC 4 cut(s) 233, 859, 2261, 2527
HpyF3I CTNAG 5 cut(s) 203, 588, 597, 1868, 2833
HpySE526I ACGT 3 cut(s) 305, 1321, 2284
HspAI GCGC 3 cut(s) 118, 189, 1231
KpnI GGTACC 1 cut(s) 1960
Ksp22I TGATCA 1 cut(s) 2749
LmnI GCTCC 6 cut(s) 21, 59, 358, 1565, 2236, 2371
Lsp1109I GCAGC 5 cut(s) 528, 728, 1557, 2071, 2248
LweI GCATC 8 cut(s) 3, 340, 1218, 1288, 1524, 1940, 2071, 2746
MaeI CTAG 8 cut(s) 186, 192, 672, 1355, 1430, 1436, 2469, 2877
MaeII ACGT 3 cut(s) 305, 1321, 2284
MaeIII GTNAC 2 cut(s) 610, 1736
MbiI CCGCTC 1 cut(s) 1250
MfeI CAATTG 2 cut(s) 536, 2240
MflI RGATCY 4 cut(s) 528, 1039, 1366, 1795
MhlI GDGCHC 1 cut(s) 2617
MlyI GAGTC 7 cut(s) 493, 743, 782, 1454, 1844, 2497, 2861
MmeI TCCRAC 3 cut(s) 1394, 2156, 2559
Mph1103I ATGCAT 2 cut(s) 2682, 2761
MroXI GAANNNNTTC 1 cut(s) 2277
MseI TTAA 7 cut(s) 336, 684, 1067, 1772, 2514, 2567, 2592
MslI CAYNNNNRTG 5 cut(s) 1595, 2328, 2655, 2681, 2887
MspA1I CMGCKG 2 cut(s) 1145, 1927
MspI CCGG 4 cut(s) 365, 545, 711, 1877
MspR9I CCNGG 9 cut(s) 712, 721, 914, 1477, 1491, 1557, 2007, 2061, 2559
MunI CAATTG 2 cut(s) 536, 2240
Mva1269I GAATGC 3 cut(s) 760, 1205, 2336
MvaI CCWGG 8 cut(s) 721, 914, 1477, 1491, 1557, 2007, 2061, 2559
MvnI CGCG 2 cut(s) 118, 136
MwoI GCNNNNNNNGC 4 cut(s) 233, 859, 2261, 2527
NciI CCSGG 1 cut(s) 712
NcoI CCATGG 2 cut(s) 2536, 2650
NdeI CATATG 2 cut(s) 1594, 2329
NheI GCTAGC 2 cut(s) 185, 191
NlaIV GGNNCC 9 cut(s) 163, 256, 530, 562, 620, 852, 1041, 1561, 1958
NmeAIII GCCGAG 2 cut(s) 262, 1213
NmuCI GTSAC 1 cut(s) 1736
NotI GCGGCCGC 1 cut(s) 131
NsiI ATGCAT 2 cut(s) 2682, 2761
NspI RCATGY 3 cut(s) 2366, 2684, 2763
OliI CACNNNNGTG 1 cut(s) 1595
PaeR7I CTCGAG 1 cut(s) 196
PagI TCATGA 1 cut(s) 2340
PceI AGGCCT 1 cut(s) 724
PctI GAATGC 3 cut(s) 760, 1205, 2336
PdmI GAANNNNTTC 1 cut(s) 2277
PfeI GAWTC 4 cut(s) 299, 582, 1424, 2632
PfoI TCCNGGA 2 cut(s) 912, 1489
PleI GAGTC 7 cut(s) 493, 742, 782, 1453, 1843, 2496, 2861
PmaCI CACGTG 1 cut(s) 1322
PmlI CACGTG 1 cut(s) 1322
PpsI GAGTC 7 cut(s) 493, 742, 782, 1453, 1843, 2496, 2861
Ppu21I YACGTR 1 cut(s) 1322
PpuMI RGGWCCY 1 cut(s) 906
Psp5II RGGWCCY 1 cut(s) 906
Psp6I CCWGG 8 cut(s) 719, 912, 1475, 1489, 1555, 2005, 2059, 2557
PspCI CACGTG 1 cut(s) 1322
PspFI CCCAGC 1 cut(s) 2120
PspGI CCWGG 8 cut(s) 719, 912, 1475, 1489, 1555, 2005, 2059, 2557
PspN4I GGNNCC 9 cut(s) 163, 256, 530, 562, 620, 852, 1041, 1561, 1958
PspPI GGNCC 8 cut(s) 153, 618, 860, 906, 1013, 2030, 2129, 2180
PspPPI RGGWCCY 1 cut(s) 906
PspXI VCTCGAGB 1 cut(s) 196
PsrI GAACNNNNNNTAC 2 cut(s) 544, 576
PstNI CAGNNNCTG 1 cut(s) 2261
PsuI RGATCY 4 cut(s) 528, 1039, 1366, 1795
PvuII CAGCTG 2 cut(s) 1145, 1927
RsaI GTAC 7 cut(s) 386, 553, 1104, 1454, 1547, 1958, 2473
RsaNI GTAC 7 cut(s) 385, 552, 1103, 1453, 1546, 1957, 2472
RseI CAYNNNNRTG 5 cut(s) 1595, 2328, 2655, 2681, 2887
SaqAI TTAA 7 cut(s) 336, 684, 1067, 1772, 2514, 2567, 2592
Sau96I GGNCC 8 cut(s) 153, 618, 860, 906, 1013, 2030, 2129, 2180
ScaI AGTACT 1 cut(s) 2473
SchI GAGTC 7 cut(s) 493, 743, 782, 1454, 1844, 2497, 2861
ScrFI CCNGG 9 cut(s) 712, 721, 914, 1477, 1491, 1557, 2007, 2061, 2559
SduI GDGCHC 1 cut(s) 2617
SfaNI GCATC 8 cut(s) 3, 340, 1218, 1288, 1524, 1940, 2071, 2746
Sfr274I CTCGAG 1 cut(s) 196
SinI GGWCC 6 cut(s) 153, 618, 906, 1013, 2129, 2180
SlaI CTCGAG 1 cut(s) 196
SmiMI CAYNNNNRTG 5 cut(s) 1595, 2328, 2655, 2681, 2887
SmlI CTYRAG 2 cut(s) 196, 699
SmoI CTYRAG 2 cut(s) 196, 699
SpeI ACTAGT 2 cut(s) 671, 2468
SseBI AGGCCT 1 cut(s) 724
SspI AATATT 3 cut(s) 1821, 1859, 2717
SspMI CTAG 8 cut(s) 186, 192, 672, 1355, 1430, 1436, 2469, 2877
StuI AGGCCT 1 cut(s) 724
StyD4I CCNGG 9 cut(s) 710, 719, 912, 1475, 1489, 1555, 2005, 2059, 2557
StyI CCWWGG 3 cut(s) 2536, 2650, 2876
TaaI ACNGT 3 cut(s) 254, 402, 749
TaiI ACGT 3 cut(s) 308, 1324, 2287
TaqI TCGA 6 cut(s) 197, 652, 1389, 1689, 2158, 2281
TatI WGTACW 2 cut(s) 1545, 2471
TauI GCSGC 8 cut(s) 133, 136, 170, 173, 249, 361, 427, 2663
TfiI GAWTC 4 cut(s) 299, 582, 1424, 2632
Tru1I TTAA 7 cut(s) 336, 684, 1067, 1772, 2514, 2567, 2592
Tru9I TTAA 7 cut(s) 336, 684, 1067, 1772, 2514, 2567, 2592
TscAI CASTG 4 cut(s) 277, 1023, 2814, 2833
TseFI GTSAC 1 cut(s) 1736
TseI GCWGC 5 cut(s) 541, 716, 1570, 2084, 2261
Tsp45I GTSAC 1 cut(s) 1736
TspGWI ACGGA 6 cut(s) 95, 113, 247, 1385, 1477, 1905
TspRI CASTG 4 cut(s) 277, 1023, 2814, 2833
VpaK11BI GGWCC 6 cut(s) 153, 618, 906, 1013, 2129, 2180
XapI RAATTY 5 cut(s) 867, 1903, 2066, 2114, 2791
XceI RCATGY 3 cut(s) 2366, 2684, 2763
XcmI CCANNNNNNNNNTGG 2 cut(s) 1967, 2046
XhoI CTCGAG 1 cut(s) 196
XmaJI CCTAGG 1 cut(s) 2876
XmnI GAANNNNTTC 1 cut(s) 2277
XspI CTAG 8 cut(s) 186, 192, 672, 1355, 1430, 1436, 2469, 2877
ZrmI AGTACT 1 cut(s) 2473
Zsp2I ATGCAT 2 cut(s) 2682, 2761
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.