MD02G1011700.v1.1

WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0005412
Physical Location & Seq
Forward (+)
750838 .. 753511
2674 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1011700.v1.1.491

Sequence Viewer

Length: 1554 bp
ATGGCGACTGAGAAACTCACAGAGTACGAGCGTAAGAGGCTCGAGAACATCCGCCGGAACGATGAAATGATGTCTTCCCTCAAGCTCCAATCCATCAAAGCCCAAGTCTCTGTCTCCACCAAACGCCCAAGGGTCGAGACCAAATCGTACAATGTTAGTCCGAAGAAACAACCCAAAACCCAGACCCCAATTGTCATGAGGCGATCTTTACGCACGCGCGGGTTACCGCCCGATGCGAAGGGCCTAAGCGACGAGGTTCTCGAATCCATGGCCGAAACCCCGAATTCTTCGAGCCCATTGAAGGGGTTGCCTAGCTATTTGGGTCCTCTTAGCATGAAAGATGCCTACAGCGGAGTGTCAGATCGAGCTTTAATAGAAACAATTCTGGATATTTCGAAGAAGCCCCAATTGGATGCTTCAGTGAAAGGTGAAATTAAGGGCGAAAATGGCAGATTTGAGGGTGGCAAAGGTGAGAGCTTTTCGATTAACGAAGAAAATGAAGTTGAAATTGGTGAGAAGACAGAACCTCTGAGTGAGGGAATTGGTGGGTTTACTTGTGGTTTGGTTAAGAAGGAAGAAAATGAAGTGTGGAGTAGTTTAAAGGTAGAGTCTTTGACTCTAAAACCGGAGAATGTAGCGAGGGTTGTGCCCGGCAGGATTATGAATGTGAAGTTTTTTCCTTGTACTAGTTCGAATATGATTGCGGTTGGAAATAAGTATGGGAATGTTGGATTTTGGCATATTGATTCTAAGGAAGATGAAGAAAGCGGAATATATTTGTATCATCCACATAGTGGTCCTATTTCGGGGATTTTGATTCAGCAACATTGCATGTCAAAGATCTTTACCAGTTGTTATCATGGCTATATCCGGTTGATGGATGCCGAGAAAGAGGTGTTTGATCTAGTACAATCCTGTGAAAAGCCTATATACTCTATGTCTCAACAATCGAAGGATCCGAACTGCTTATATTTTGCTGAGGGCAATGGAGGTTTAAGTGTCTGGGATCAGAGAACTGGAAGCTTCTCAAACCAGTGGTCTTTGCATGAATACCGAATCAATAGCATTGACTTTAGCTCAGCAAACCCTAACCTCATGGCCACTAGTTCCTCAGACGGAACTGCCTGCATTTGGGATTTGAGAAGTATTCATGCAGATAAAACTTTACGAACAGTTAGCCACAATAGGGCTGTGCATTCTGCTTACTTCTCGCCTTCTGGAGGGTTTCTTGCAACGACAAGTATTGACGATACAGTTGGTATATCGAGTGGAGCTAATTTCCAGGACACATCAATGATATACCATAACAATAATACCAGCAGATGGATTTCTAAGTTCAGGGGAATATGGGGGTGGGACGACGCCTACGTCTTCATAGGCAACGTGAAAAGAGGAGTAGATGTGATCTCCCCAGCTGCAAGAAGAACAGTGCTCACTTTAGAGAGCCCGCACATGACTGCGATTCCATGTCGATTTGATGCTCACCCTTACAACGTTGGGATGCTAGCAGGATCCACAGCCGGAGGCCAAGTTTATGTATGGACATTGGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

518

Amino Acids

57.28

Weight (kDa)

6.87

Isoelectric Point (pI)

45.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR36-Utp21_2nd PF25168 203 - 421 3.1e-11 WDR36/Utp21 second beta-propeller domain
WD40_Prp19 PF24814 219 - 423 7.2e-16 Prp19 WD40 domain
WDR55 PF24796 219 - 382 2.9e-09 WDR55
Beta-prop_THOC3 PF25174 231 - 435 2.5e-15 THOC3 beta-propeller domain
WD40_CDC20-Fz PF24807 297 - 433 1.5e-12 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st PF25173 307 - 419 3.8e-10 WDR3 first beta-propeller domain
EIF3I PF24805 310 - 410 5.5e-07 EIF3I
Beta-prop_EIPR1 PF23609 320 - 419 1.1e-07 EIPR1 beta-propeller
Beta-prop_WDR5 PF25175 332 - 514 4.5e-15 WDR5 beta-propeller domain
Beta-prop_WDR36-Utp21_1st PF25171 350 - 418 4.9e-07 WDR36/Utp21 first beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1367
AccB7I CCANNNNNTGG 2 cut(s) 794, 1323
AccII CGCG 2 cut(s) 217, 219
AciI CCGC 7 cut(s) 52, 219, 227, 351, 704, 768, 1448
AclI AACGTT 1 cut(s) 1494
AclWI GGATC 5 cut(s) 950, 963, 1014, 1506, 1519
AcoI YGGCCR 2 cut(s) 270, 1098
AcsI RAATTY 1 cut(s) 283
AcuI CTGAAG 1 cut(s) 402
AcyI GRCGYC 1 cut(s) 1362
AdeI CACNNNGTG 1 cut(s) 794
AfaI GTAC 4 cut(s) 26, 149, 685, 909
AfiI CCNNNNNNNGG 9 cut(s) 301, 302, 794, 806, 877, 1131, 1186, 1220, 1323
AgsI TTSAA 2 cut(s) 301, 506
AhlI ACTAGT 2 cut(s) 686, 1103
AjnI CCWGG 1 cut(s) 1281
AjuI GAANNNNNNNTTGG 4 cut(s) 392, 424, 492, 524
AluBI AGCT 8 cut(s) 85, 315, 368, 477, 1023, 1077, 1274, 1415
AluI AGCT 8 cut(s) 85, 315, 368, 477, 1023, 1077, 1274, 1415
Alw21I GWGCWC 1 cut(s) 1434
Alw26I GTCTC 4 cut(s) 112, 118, 131, 945
AlwI GGATC 5 cut(s) 950, 963, 1014, 1506, 1519
Ama87I CYCGRG 1 cut(s) 41
AoxI GGCC 4 cut(s) 241, 270, 1098, 1525
ApeKI GCWGC 1 cut(s) 1415
ApoI RAATTY 1 cut(s) 283
ArsI GACNNNNNNTTYG 4 cut(s) 90, 122, 1022, 1054
Asp700I GAANNNNTTC 1 cut(s) 381
AspLEI GCGC 1 cut(s) 219
AspS9I GGNCC 3 cut(s) 241, 323, 797
AsuC2I CCSGG 1 cut(s) 651
AsuHPI GGTGA 4 cut(s) 440, 482, 524, 1475
AsuII TTCGAA 2 cut(s) 395, 692
AsuNHI GCTAGC 1 cut(s) 1504
AvaI CYCGRG 1 cut(s) 41
AvaII GGWCC 2 cut(s) 323, 797
BaeGI GKGCMC 1 cut(s) 651
BalI TGGCCA 1 cut(s) 1100
BamHI GGATCC 2 cut(s) 955, 1511
BanII GRGCYC 2 cut(s) 296, 1448
BbsI GAAGAC 3 cut(s) 66, 524, 1363
Bbv12I GWGCWC 1 cut(s) 1434
BbvCI CCTCAGC 1 cut(s) 978
BbvI GCAGC 1 cut(s) 1402
BccI CCATC 3 cut(s) 101, 871, 1317
BcgI CGANNNNNNTGC 2 cut(s) 628, 662
BciT130I CCWGG 1 cut(s) 1283
BcnI CCSGG 1 cut(s) 651
BcoDI GTCTC 4 cut(s) 112, 118, 131, 945
BcuI ACTAGT 2 cut(s) 686, 1103
BfaI CTAG 6 cut(s) 312, 687, 905, 1104, 1505, 1552
BfmI CTRYAG 1 cut(s) 346
BglII AGATCT 1 cut(s) 840
BisI GCNGC 1 cut(s) 1416
BlpI GCTNAGC 1 cut(s) 1078
BlsI GCNGC 1 cut(s) 1417
Bme1390I CCNGG 2 cut(s) 651, 1283
Bme18I GGWCC 2 cut(s) 323, 797
BmeT110I CYCGRG 1 cut(s) 41
BmgT120I GGNCC 3 cut(s) 241, 323, 797
BmiI GGNNCC 3 cut(s) 324, 957, 1513
BmrFI CCNGG 2 cut(s) 651, 1283
BmsI GCATC 6 cut(s) 223, 331, 403, 871, 1468, 1491
BmtI GCTAGC 1 cut(s) 1508
BpiI GAAGAC 3 cut(s) 66, 524, 1363
BpmI CTGGAG 1 cut(s) 1239
Bpu10I CCTNAGC 2 cut(s) 245, 978
Bpu1102I GCTNAGC 1 cut(s) 1078
Bpu14I TTCGAA 2 cut(s) 395, 692
BpuEI CTTGAG 1 cut(s) 65
BpuMI CCSGG 1 cut(s) 651
BsaHI GRCGYC 1 cut(s) 1362
BsaI GGTCTC 1 cut(s) 131
BsaJI CCNNGG 2 cut(s) 128, 267
BsaWI WCCGGW 2 cut(s) 625, 870
BsaXI ACNNNNNCTCC 4 cut(s) 1386, 1416, 1515, 1545
Bsc4I CCNNNNNNNGG 9 cut(s) 301, 302, 794, 806, 877, 1131, 1186, 1220, 1323
Bse1I ACTGG 3 cut(s) 849, 1021, 1033
Bse3DI GCAATG 2 cut(s) 826, 991
BseBI CCWGG 1 cut(s) 1283
BseDI CCNNGG 2 cut(s) 128, 267
BseGI GGATG 5 cut(s) 48, 418, 784, 886, 1506
BseLI CCNNNNNNNGG 9 cut(s) 301, 302, 794, 806, 877, 1131, 1186, 1220, 1323
BseMI GCAATG 2 cut(s) 826, 991
BseMII CTCAG 4 cut(s) 521, 969, 1092, 1125
BseNI ACTGG 3 cut(s) 849, 1021, 1033
BseRI GAGGAG 1 cut(s) 1407
BseSI GKGCMC 1 cut(s) 651
BseXI GCAGC 1 cut(s) 1402
BseYI CCCAGC 1 cut(s) 1411
Bsh1236I CGCG 2 cut(s) 217, 219
BshFI GGCC 4 cut(s) 243, 272, 1100, 1527
BsiHKAI GWGCWC 1 cut(s) 1434
BsiHKCI CYCGRG 1 cut(s) 41
BsiSI CCGG 5 cut(s) 55, 626, 651, 871, 1521
BslFI GGGAC 1 cut(s) 1370
BslI CCNNNNNNNGG 9 cut(s) 301, 302, 794, 806, 877, 1131, 1186, 1220, 1323
BsmAI GTCTC 4 cut(s) 112, 118, 131, 945
BsmFI GGGAC 1 cut(s) 1370
BsmI GAATGC 1 cut(s) 1195
BsnI GGCC 4 cut(s) 243, 272, 1100, 1527
Bso31I GGTCTC 1 cut(s) 131
BsoBI CYCGRG 1 cut(s) 41
Bsp119I TTCGAA 2 cut(s) 395, 692
Bsp1286I GDGCHC 4 cut(s) 296, 651, 1434, 1448
Bsp143I GATC 8 cut(s) 203, 361, 840, 901, 955, 1006, 1404, 1511
Bsp1720I GCTNAGC 1 cut(s) 1078
Bsp19I CCATGG 1 cut(s) 267
BspACI CCGC 7 cut(s) 52, 219, 227, 351, 704, 768, 1448
BspANI GGCC 4 cut(s) 243, 272, 1100, 1527
BspCNI CTCAG 4 cut(s) 522, 970, 1091, 1124
BspFNI CGCG 2 cut(s) 217, 219
BspHI TCATGA 1 cut(s) 195
BspLI GGNNCC 3 cut(s) 324, 957, 1513
BspOI GCTAGC 1 cut(s) 1508
BspPI GGATC 5 cut(s) 950, 963, 1014, 1506, 1519
BspT104I TTCGAA 2 cut(s) 395, 692
BspTNI GGTCTC 1 cut(s) 131
BsrDI GCAATG 2 cut(s) 826, 991
BsrI ACTGG 3 cut(s) 849, 1021, 1033
BssECI CCNNGG 2 cut(s) 128, 267
BssMI GATC 8 cut(s) 203, 361, 840, 901, 955, 1006, 1404, 1511
BssNI GRCGYC 1 cut(s) 1362
BssT1I CCWWGG 2 cut(s) 128, 267
Bst2UI CCWGG 1 cut(s) 1283
Bst4CI ACNGT 3 cut(s) 1174, 1255, 1429
BstACI GRCGYC 1 cut(s) 1362
BstBI TTCGAA 2 cut(s) 395, 692
BstC8I GCNNGC 4 cut(s) 215, 1126, 1448, 1506
BstDEI CTNAG 9 cut(s) 9, 245, 329, 530, 750, 978, 1078, 1111, 1332
BstDSI CCRYGG 1 cut(s) 267
BstEII GGTNACC 1 cut(s) 222
BstENI CCTNNNNNAGG 1 cut(s) 1218
BstF5I GGATG 5 cut(s) 48, 418, 784, 886, 1506
BstFNI CGCG 2 cut(s) 217, 219
BstHHI GCGC 1 cut(s) 219
BstKTI GATC 8 cut(s) 206, 364, 843, 904, 958, 1009, 1407, 1514
BstMAI GTCTC 4 cut(s) 112, 118, 131, 945
BstMBI GATC 8 cut(s) 203, 361, 840, 901, 955, 1006, 1404, 1511
BstMWI GCNNNNNNNGC 2 cut(s) 37, 447
BstNI CCWGG 1 cut(s) 1283
BstNSI RCATGY 1 cut(s) 835
BstPI GGTNACC 1 cut(s) 222
BstSCI CCNGG 2 cut(s) 649, 1281
BstSFI CTRYAG 1 cut(s) 346
BstSLI GKGCMC 1 cut(s) 651
BstUI CGCG 2 cut(s) 217, 219
BstV1I GCAGC 1 cut(s) 1402
BstV2I GAAGAC 3 cut(s) 66, 524, 1363
BstX2I RGATCY 3 cut(s) 840, 955, 1511
BstYI RGATCY 3 cut(s) 840, 955, 1511
BsuRI GGCC 4 cut(s) 243, 272, 1100, 1527
BtgI CCRYGG 1 cut(s) 267
BtsCI GGATG 5 cut(s) 48, 418, 784, 886, 1506
BtsIMutI CAGTG 3 cut(s) 426, 1040, 1434
Cac8I GCNNGC 4 cut(s) 215, 1126, 1448, 1506
CciI TCATGA 1 cut(s) 195
CfoI GCGC 1 cut(s) 219
Cfr13I GGNCC 3 cut(s) 241, 323, 797
CseI GACGC 1 cut(s) 1370
Csp6I GTAC 4 cut(s) 25, 148, 684, 908
CviQI GTAC 4 cut(s) 25, 148, 684, 908
DdeI CTNAG 9 cut(s) 9, 245, 329, 530, 750, 978, 1078, 1111, 1332
DpnI GATC 8 cut(s) 205, 363, 842, 903, 957, 1008, 1406, 1513
DpnII GATC 8 cut(s) 203, 361, 840, 901, 955, 1006, 1404, 1511
DraI TTTAAA 1 cut(s) 600
DraIII CACNNNGTG 1 cut(s) 794
DrdI GACNNNNNNGTC 1 cut(s) 1367
DseDI GACNNNNNNGTC 1 cut(s) 1367
EaeI YGGCCR 2 cut(s) 270, 1098
EciI GGCGGA 1 cut(s) 41
Eco130I CCWWGG 2 cut(s) 128, 267
Eco24I GRGCYC 2 cut(s) 296, 1448
Eco31I GGTCTC 1 cut(s) 131
Eco47I GGWCC 2 cut(s) 323, 797
Eco57I CTGAAG 1 cut(s) 402
Eco88I CYCGRG 1 cut(s) 41
Eco91I GGTNACC 1 cut(s) 222
EcoNI CCTNNNNNAGG 1 cut(s) 1218
EcoO109I RGGNCCY 2 cut(s) 241, 323
EcoO65I GGTNACC 1 cut(s) 222
EcoRI GAATTC 1 cut(s) 283
EcoRII CCWGG 1 cut(s) 1281
EcoT14I CCWWGG 2 cut(s) 128, 267
EcoT38I GRGCYC 2 cut(s) 296, 1448
ErhI CCWWGG 2 cut(s) 128, 267
FaqI GGGAC 1 cut(s) 1370
FauI CCCGC 2 cut(s) 212, 1455
Fnu4HI GCNGC 1 cut(s) 1416
FokI GGATG 5 cut(s) 35, 425, 771, 893, 1513
FriOI GRGCYC 2 cut(s) 296, 1448
Fsp4HI GCNGC 1 cut(s) 1416
FspBI CTAG 6 cut(s) 312, 687, 905, 1104, 1505, 1552
GlaI GCGC 1 cut(s) 218
GluI GCNGC 1 cut(s) 1416
GsaI CCCAGC 1 cut(s) 1415
GsuI CTGGAG 1 cut(s) 1239
HaeIII GGCC 4 cut(s) 243, 272, 1100, 1527
HapII CCGG 5 cut(s) 55, 626, 651, 871, 1521
HgaI GACGC 1 cut(s) 1370
HhaI GCGC 1 cut(s) 219
Hin1I GRCGYC 1 cut(s) 1362
Hin6I GCGC 1 cut(s) 217
HinP1I GCGC 1 cut(s) 217
HindIII AAGCTT 1 cut(s) 1021
HinfI GANTC 7 cut(s) 263, 608, 616, 746, 817, 1056, 1462
HpaII CCGG 5 cut(s) 55, 626, 651, 871, 1521
HphI GGTGA 4 cut(s) 440, 482, 524, 1475
Hpy166II GTNNAC 1 cut(s) 552
Hpy188I TCNGA 6 cut(s) 162, 361, 531, 960, 1011, 1114
Hpy188III TCNNGA 6 cut(s) 43, 136, 196, 260, 386, 1218
Hpy8I GTNNAC 1 cut(s) 552
Hpy99I CGWCG 2 cut(s) 254, 1364
HpyAV CCTTC 5 cut(s) 232, 295, 565, 946, 1224
HpyCH4III ACNGT 3 cut(s) 1174, 1255, 1429
HpyCH4IV ACGT 3 cut(s) 1368, 1383, 1494
HpyCH4V TGCA 7 cut(s) 831, 1045, 1128, 1154, 1195, 1232, 1418
HpyF10VI GCNNNNNNNGC 2 cut(s) 37, 447
HpyF3I CTNAG 9 cut(s) 9, 245, 329, 530, 750, 978, 1078, 1111, 1332
HpySE526I ACGT 3 cut(s) 1368, 1383, 1494
Hsp92I GRCGYC 1 cut(s) 1362
HspAI GCGC 1 cut(s) 217
Kzo9I GATC 8 cut(s) 203, 361, 840, 901, 955, 1006, 1404, 1511
LmnI GCTCC 2 cut(s) 90, 1271
Lsp1109I GCAGC 1 cut(s) 1402
LweI GCATC 6 cut(s) 223, 331, 403, 871, 1468, 1491
MaeI CTAG 6 cut(s) 312, 687, 905, 1104, 1505, 1552
MaeII ACGT 3 cut(s) 1368, 1383, 1494
MaeIII GTNAC 1 cut(s) 222
MalI GATC 8 cut(s) 205, 363, 842, 903, 957, 1008, 1406, 1513
MboI GATC 8 cut(s) 203, 361, 840, 901, 955, 1006, 1404, 1511
MfeI CAATTG 2 cut(s) 189, 407
MflI RGATCY 3 cut(s) 840, 955, 1511
MhlI GDGCHC 4 cut(s) 296, 651, 1434, 1448
MlsI TGGCCA 1 cut(s) 1100
MluCI AATT 8 cut(s) 189, 283, 381, 407, 432, 507, 540, 1276
MluNI TGGCCA 1 cut(s) 1100
MlyI GAGTC 2 cut(s) 610, 617
MmeI TCCRAC 2 cut(s) 688, 709
Mox20I TGGCCA 1 cut(s) 1100
MroXI GAANNNNTTC 1 cut(s) 381
MscI TGGCCA 1 cut(s) 1100
MseI TTAA 6 cut(s) 371, 435, 486, 567, 599, 995
MslI CAYNNNNRTG 1 cut(s) 1292
Msp20I TGGCCA 1 cut(s) 1100
MspA1I CMGCKG 2 cut(s) 351, 1415
MspI CCGG 5 cut(s) 55, 626, 651, 871, 1521
MspR9I CCNGG 2 cut(s) 651, 1283
MunI CAATTG 2 cut(s) 189, 407
Mva1269I GAATGC 1 cut(s) 1195
MvaI CCWGG 1 cut(s) 1283
MvnI CGCG 2 cut(s) 217, 219
MwoI GCNNNNNNNGC 2 cut(s) 37, 447
NciI CCSGG 1 cut(s) 651
NcoI CCATGG 1 cut(s) 267
NdeII GATC 8 cut(s) 203, 361, 840, 901, 955, 1006, 1404, 1511
NheI GCTAGC 1 cut(s) 1504
NlaIV GGNNCC 3 cut(s) 324, 957, 1513
NmeAIII GCCGAG 1 cut(s) 910
NspI RCATGY 1 cut(s) 835
NspV TTCGAA 2 cut(s) 395, 692
PaeR7I CTCGAG 1 cut(s) 41
PagI TCATGA 1 cut(s) 195
PcsI WCGNNNNNNNCGW 3 cut(s) 258, 956, 1365
PctI GAATGC 1 cut(s) 1195
PdmI GAANNNNTTC 1 cut(s) 381
PfeI GAWTC 5 cut(s) 263, 746, 817, 1056, 1462
PflMI CCANNNNNTGG 2 cut(s) 794, 1323
PfoI TCCNGGA 1 cut(s) 1281
PkrI GCNGC 1 cut(s) 1417
PleI GAGTC 2 cut(s) 610, 616
PpsI GAGTC 2 cut(s) 610, 616
PpuMI RGGWCCY 1 cut(s) 323
Psp1406I AACGTT 1 cut(s) 1494
Psp5II RGGWCCY 1 cut(s) 323
Psp6I CCWGG 1 cut(s) 1281
PspEI GGTNACC 1 cut(s) 222
PspFI CCCAGC 1 cut(s) 1411
PspGI CCWGG 1 cut(s) 1281
PspN4I GGNNCC 3 cut(s) 324, 957, 1513
PspPI GGNCC 3 cut(s) 241, 323, 797
PspPPI RGGWCCY 1 cut(s) 323
PsuI RGATCY 3 cut(s) 840, 955, 1511
PvuII CAGCTG 1 cut(s) 1415
RsaI GTAC 4 cut(s) 26, 149, 685, 909
RsaNI GTAC 4 cut(s) 25, 148, 684, 908
RseI CAYNNNNRTG 1 cut(s) 1292
SaqAI TTAA 6 cut(s) 371, 435, 486, 567, 599, 995
SatI GCNGC 1 cut(s) 1416
Sau3AI GATC 8 cut(s) 203, 361, 840, 901, 955, 1006, 1404, 1511
Sau96I GGNCC 3 cut(s) 241, 323, 797
SchI GAGTC 2 cut(s) 610, 617
ScrFI CCNGG 2 cut(s) 651, 1283
SduI GDGCHC 4 cut(s) 296, 651, 1434, 1448
SfaNI GCATC 6 cut(s) 223, 331, 403, 871, 1468, 1491
SfcI CTRYAG 1 cut(s) 346
Sfr274I CTCGAG 1 cut(s) 41
SfuI TTCGAA 2 cut(s) 395, 692
SinI GGWCC 2 cut(s) 323, 797
SlaI CTCGAG 1 cut(s) 41
SmiMI CAYNNNNRTG 1 cut(s) 1292
SmlI CTYRAG 2 cut(s) 41, 80
SmoI CTYRAG 2 cut(s) 41, 80
SpeI ACTAGT 2 cut(s) 686, 1103
Sse9I AATT 8 cut(s) 189, 283, 381, 407, 432, 507, 540, 1276
SsiI CCGC 7 cut(s) 52, 219, 227, 351, 704, 768, 1448
SspMI CTAG 6 cut(s) 312, 687, 905, 1104, 1505, 1552
StyD4I CCNGG 2 cut(s) 649, 1281
StyI CCWWGG 2 cut(s) 128, 267
TaaI ACNGT 3 cut(s) 1174, 1255, 1429
TaiI ACGT 3 cut(s) 1371, 1386, 1497
TasI AATT 8 cut(s) 189, 283, 381, 407, 432, 507, 540, 1276
TatI WGTACW 2 cut(s) 683, 907
TfiI GAWTC 5 cut(s) 263, 746, 817, 1056, 1462
Tru1I TTAA 6 cut(s) 371, 435, 486, 567, 599, 995
Tru9I TTAA 6 cut(s) 371, 435, 486, 567, 599, 995
TscAI CASTG 3 cut(s) 426, 1040, 1434
TseI GCWGC 1 cut(s) 1415
TspDTI ATGAA 9 cut(s) 78, 350, 513, 597, 677, 774, 1062, 1139, 1363
TspGWI ACGGA 1 cut(s) 1131
TspRI CASTG 3 cut(s) 426, 1040, 1434
Van91I CCANNNNNTGG 2 cut(s) 794, 1323
VpaK11BI GGWCC 2 cut(s) 323, 797
XagI CCTNNNNNAGG 1 cut(s) 1218
XapI RAATTY 1 cut(s) 283
XceI RCATGY 1 cut(s) 835
XhoI CTCGAG 1 cut(s) 41
XmnI GAANNNNTTC 1 cut(s) 381
XspI CTAG 6 cut(s) 312, 687, 905, 1104, 1505, 1552
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.