MD03G1011700.v1.1

Metal tolerance protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Reverse (-)
898325 .. 902208
3884 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1011700.v1.1.491

Sequence Viewer

Length: 1224 bp
ATGGAGGAAAAATCGGAAACGAGCGGTGTAAAAACGCCGCTCTTCACACCGCTGTTGGGGAGCGGTGGACGCAGTCGCCGACTGAGTCGAAGAAACTCGTACAACTCACTCAGAAAGGACTTCATTTCGAGGCTCCCTGACAAGGTCCGTGCCGGTGTTGACCCCGAGTCTCCTGACGGCATTGACTTCTCTCGAACCTCCGCCTTGAACCGTGGAGAGAAGGAGTACTATGAAGCCCAATTTGAAACACTTAAATCCTTTGAGGAGGTTGACGCTGTGGCGGCAGCCGACAGCATCGATGATGAGGATCTCGAAGAACAAGCACAACATGAAAGAGCAATGAAGATTTCCAACTATGCCAATATTATTCTCTTGGGACTTAAGATCTATGCTACTGTAAAGAGTGGATCGATAGCCATTGCTGCATCGACTCTAGATTCTTTGCTCGATCTCATGGCTGGTGGAATACTTTGGTTCACTCACCTTGCAATGAAGAGCGTCAATATCTATAAATATCCTATCGGAAAATTGAGGGTGCAGCCTGTTGGCATAATTGTCTTTGCTGCTGTCATGGCTACCCTCGGGTTTCAGGTATTCATCCAGGCTTTAGAACAACTAATAACCGGTAATGCCACTGAAAAGATGTCCGCAGAGCAATTGGCGTGGTTGTACGCTATCATGATATTTGCCACCGTGGTAAAGCTTGCACTCTGGTTATACTGCAGGACCTCAGGGAACAAGATTGTCCGTGCCTACGCCAAGGATCACTATTTTGATGTGGTAACAAACGTGGTAGGATTAGTGGCTGCTGTTCTTGCTGATAAGTTTTTGTGGTGGATTGATCCTGCTGGTGCTATTATCCTTGCTGTATACACGATTACAAATTGGTCCGGAACTGTTCTAGAAAATGCAGTTTCCCTCGTGGGACAATCAGCGCCTCCGGAATTCCTACAAAAACTGACATACCTTACCATAAGGCACCCTCAAGTGAAGCGTATTGACACAGTTCGTGCTTACACATTTGGTGTTCTTTATTTTGTAGAGGTTGACATTGAACTCCCGGAGGAGTTGCCCTTGAAAGAGGCACATATCATTGGAGAGACCCTCCAGATAAAGCTTGAGAAACTTCCTGAAGTTGAGCGAGCATTTGTTCACCTTGACTTTGAATGTGACCACAAACCGGAGCATTCTGTACTCGTCAAGCTTCCGAACAGTCAGCCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

408

Amino Acids

45.43

Weight (kDa)

5.62

Isoelectric Point (pI)

43.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_efflux PF01545 115 - 308 3.7e-26 Cation efflux transmembrane domain
ZT_dimer PF16916 313 - 387 4.8e-07 Cation efflux protein, cytoplasmic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 978
AccBSI CCGCTC 3 cut(s) 24, 40, 63
AccI GTMKAC 1 cut(s) 870
AccIII TCCGGA 2 cut(s) 890, 940
AciI CCGC 7 cut(s) 24, 38, 50, 63, 201, 281, 648
AclWI GGATC 4 cut(s) 315, 415, 771, 836
AcsI RAATTY 1 cut(s) 944
AcuI CTGAAG 1 cut(s) 1152
AfaI GTAC 4 cut(s) 101, 227, 671, 1194
AfiI CCNNNNNNNGG 3 cut(s) 56, 142, 1180
AflII CTTAAG 1 cut(s) 380
AgeI ACCGGT 1 cut(s) 623
AgsI TTSAA 5 cut(s) 208, 245, 1055, 1078, 1166
AhdI GACNNNNNGTC 1 cut(s) 166
AjnI CCWGG 1 cut(s) 600
AluBI AGCT 3 cut(s) 703, 1117, 1204
AluI AGCT 3 cut(s) 703, 1117, 1204
Alw26I GTCTC 2 cut(s) 174, 1094
AlwI GGATC 4 cut(s) 315, 415, 771, 836
Ama87I CYCGRG 2 cut(s) 164, 581
Aor13HI TCCGGA 2 cut(s) 890, 940
ApeKI GCWGC 5 cut(s) 284, 422, 538, 563, 806
ApoI RAATTY 1 cut(s) 944
AsiGI ACCGGT 1 cut(s) 623
AspLEI GCGC 1 cut(s) 937
AspS9I GGNCC 3 cut(s) 145, 726, 888
AsuC2I CCSGG 1 cut(s) 1061
AsuHPI GGTGA 2 cut(s) 473, 1145
AvaI CYCGRG 2 cut(s) 164, 581
AvaII GGWCC 3 cut(s) 145, 726, 888
AxyI CCTNAGG 1 cut(s) 730
BanI GGYRCC 1 cut(s) 978
BauI CACGAG 1 cut(s) 920
BbvI GCAGC 5 cut(s) 296, 409, 550, 550, 793
BceAI ACGGC 1 cut(s) 193
BciT130I CCWGG 1 cut(s) 602
BcnI CCSGG 1 cut(s) 1061
BcoDI GTCTC 2 cut(s) 174, 1094
BfaI CTAG 2 cut(s) 434, 902
BfmI CTRYAG 1 cut(s) 721
BfoI RGCGCY 1 cut(s) 938
BfrI CTTAAG 1 cut(s) 380
BglII AGATCT 1 cut(s) 384
BisI GCNGC 7 cut(s) 38, 282, 285, 423, 539, 564, 807
BlsI GCNGC 7 cut(s) 39, 283, 286, 424, 540, 565, 808
BmcAI AGTACT 1 cut(s) 227
Bme1390I CCNGG 2 cut(s) 602, 1061
Bme18I GGWCC 3 cut(s) 145, 726, 888
BmeRI GACNNNNNGTC 1 cut(s) 166
BmeT110I CYCGRG 2 cut(s) 164, 581
BmgT120I GGNCC 3 cut(s) 145, 726, 888
BmiI GGNNCC 2 cut(s) 134, 980
BmrFI CCNGG 2 cut(s) 602, 1061
BmsI GCATC 2 cut(s) 303, 434
BplI GAGNNNNNCTC 2 cut(s) 1089, 1121
BpmI CTGGAG 1 cut(s) 1091
BpuEI CTTGAG 2 cut(s) 969, 1139
BpuMI CCSGG 1 cut(s) 1061
Bsa29I ATCGAT 2 cut(s) 297, 410
BsaBI GATNNNNATC 1 cut(s) 306
BsaI GGTCTC 1 cut(s) 1094
BsaJI CCNNGG 4 cut(s) 211, 580, 693, 759
BsaWI WCCGGW 4 cut(s) 623, 890, 940, 1180
Bsc4I CCNNNNNNNGG 3 cut(s) 56, 142, 1180
Bse118I RCCGGY 2 cut(s) 152, 623
Bse21I CCTNAGG 1 cut(s) 730
Bse3DI GCAATG 3 cut(s) 345, 417, 495
Bse8I GATNNNNATC 1 cut(s) 306
BseAI TCCGGA 2 cut(s) 890, 940
BseBI CCWGG 1 cut(s) 602
BseCI ATCGAT 2 cut(s) 297, 410
BseDI CCNNGG 4 cut(s) 211, 580, 693, 759
BseGI GGATG 1 cut(s) 597
BseJI GATNNNNATC 1 cut(s) 306
BseLI CCNNNNNNNGG 3 cut(s) 56, 142, 1180
BseMI GCAATG 3 cut(s) 345, 417, 495
BseMII CTCAG 3 cut(s) 74, 124, 744
BseRI GAGGAG 2 cut(s) 278, 1079
BseXI GCAGC 5 cut(s) 296, 409, 550, 550, 793
BsgI GTGCAG 1 cut(s) 557
BshNI GGYRCC 1 cut(s) 978
BshTI ACCGGT 1 cut(s) 623
BshVI ATCGAT 2 cut(s) 297, 410
BsiHKCI CYCGRG 2 cut(s) 164, 581
BsiSI CCGG 6 cut(s) 153, 624, 891, 941, 1061, 1181
BslFI GGGAC 2 cut(s) 390, 939
BslI CCNNNNNNNGG 3 cut(s) 56, 142, 1180
BsmAI GTCTC 2 cut(s) 174, 1094
BsmFI GGGAC 2 cut(s) 390, 939
BsmI GAATGC 1 cut(s) 1186
Bso31I GGTCTC 1 cut(s) 1094
BsoBI CYCGRG 2 cut(s) 164, 581
Bsp13I TCCGGA 2 cut(s) 890, 940
Bsp143I GATC 6 cut(s) 307, 384, 407, 448, 763, 841
BspACI CCGC 7 cut(s) 24, 38, 50, 63, 201, 281, 648
BspCNI CTCAG 3 cut(s) 75, 123, 743
BspDI ATCGAT 2 cut(s) 297, 410
BspEI TCCGGA 2 cut(s) 890, 940
BspHI TCATGA 1 cut(s) 678
BspLI GGNNCC 2 cut(s) 134, 980
BspMAI CTGCAG 1 cut(s) 725
BspPI GGATC 4 cut(s) 315, 415, 771, 836
BspQI GCTCTTC 2 cut(s) 47, 488
BspT107I GGYRCC 1 cut(s) 978
BspTI CTTAAG 1 cut(s) 380
BspTNI GGTCTC 1 cut(s) 1094
BsrBI CCGCTC 3 cut(s) 24, 40, 63
BsrDI GCAATG 3 cut(s) 345, 417, 495
BsrFI RCCGGY 2 cut(s) 152, 623
BssAI RCCGGY 2 cut(s) 152, 623
BssECI CCNNGG 4 cut(s) 211, 580, 693, 759
BssMI GATC 6 cut(s) 307, 384, 407, 448, 763, 841
BssNAI GTATAC 1 cut(s) 871
BssSI CACGAG 1 cut(s) 920
BssT1I CCWWGG 1 cut(s) 759
Bst1107I GTATAC 1 cut(s) 871
Bst2BI CACGAG 1 cut(s) 920
Bst2UI CCWGG 1 cut(s) 602
Bst4CI ACNGT 6 cut(s) 212, 397, 694, 898, 1006, 1214
Bst6I CTCTTC 2 cut(s) 47, 488
BstAFI CTTAAG 1 cut(s) 380
BstC8I GCNNGC 2 cut(s) 705, 1143
BstDEI CTNAG 3 cut(s) 83, 110, 730
BstDSI CCRYGG 2 cut(s) 211, 693
BstF5I GGATG 1 cut(s) 597
BstH2I RGCGCY 1 cut(s) 938
BstHHI GCGC 1 cut(s) 937
BstKTI GATC 6 cut(s) 310, 387, 410, 451, 766, 844
BstMAI GTCTC 2 cut(s) 174, 1094
BstMBI GATC 6 cut(s) 307, 384, 407, 448, 763, 841
BstMWI GCNNNNNNNGC 5 cut(s) 69, 281, 422, 572, 815
BstNI CCWGG 1 cut(s) 602
BstSCI CCNGG 2 cut(s) 600, 1059
BstSFI CTRYAG 1 cut(s) 721
BstV1I GCAGC 5 cut(s) 296, 409, 550, 550, 793
BstX2I RGATCY 2 cut(s) 307, 384
BstYI RGATCY 2 cut(s) 307, 384
BstZ17I GTATAC 1 cut(s) 871
Bsu15I ATCGAT 2 cut(s) 297, 410
Bsu36I CCTNAGG 1 cut(s) 730
BsuTUI ATCGAT 2 cut(s) 297, 410
BtgI CCRYGG 2 cut(s) 211, 693
BtsCI GGATG 1 cut(s) 597
BtsIMutI CAGTG 1 cut(s) 633
Cac8I GCNNGC 2 cut(s) 705, 1143
CciI TCATGA 1 cut(s) 678
CfoI GCGC 1 cut(s) 937
Cfr10I RCCGGY 2 cut(s) 152, 623
Cfr13I GGNCC 3 cut(s) 145, 726, 888
ClaI ATCGAT 2 cut(s) 297, 410
CseI GACGC 3 cut(s) 78, 281, 487
Csp6I GTAC 4 cut(s) 100, 226, 670, 1193
CspAI ACCGGT 1 cut(s) 623
CspCI CAANNNNNGTGG 2 cut(s) 644, 679
CviAII CATG 4 cut(s) 329, 454, 571, 679
CviQI GTAC 4 cut(s) 100, 226, 670, 1193
DdeI CTNAG 3 cut(s) 83, 110, 730
DpnI GATC 6 cut(s) 309, 386, 409, 450, 765, 843
DpnII GATC 6 cut(s) 307, 384, 407, 448, 763, 841
DriI GACNNNNNGTC 1 cut(s) 166
Eam1104I CTCTTC 2 cut(s) 47, 488
Eam1105I GACNNNNNGTC 1 cut(s) 166
EarI CTCTTC 2 cut(s) 47, 488
EciI GGCGGA 1 cut(s) 190
Eco130I CCWWGG 1 cut(s) 759
Eco31I GGTCTC 1 cut(s) 1094
Eco47I GGWCC 3 cut(s) 145, 726, 888
Eco57I CTGAAG 1 cut(s) 1152
Eco81I CCTNAGG 1 cut(s) 730
Eco88I CYCGRG 2 cut(s) 164, 581
EcoO109I RGGNCCY 1 cut(s) 726
EcoRI GAATTC 1 cut(s) 944
EcoRII CCWGG 1 cut(s) 600
EcoT14I CCWWGG 1 cut(s) 759
ErhI CCWWGG 1 cut(s) 759
FaeI CATG 4 cut(s) 332, 457, 574, 682
FaqI GGGAC 2 cut(s) 390, 939
FatI CATG 4 cut(s) 328, 453, 570, 678
FblI GTMKAC 1 cut(s) 870
Fnu4HI GCNGC 7 cut(s) 38, 282, 285, 423, 539, 564, 807
FokI GGATG 1 cut(s) 584
Fsp4HI GCNGC 7 cut(s) 38, 282, 285, 423, 539, 564, 807
FspBI CTAG 2 cut(s) 434, 902
GlaI GCGC 1 cut(s) 936
GluI GCNGC 7 cut(s) 38, 282, 285, 423, 539, 564, 807
GsuI CTGGAG 1 cut(s) 1091
HaeII RGCGCY 1 cut(s) 938
HapII CCGG 6 cut(s) 153, 624, 891, 941, 1061, 1181
HgaI GACGC 3 cut(s) 78, 281, 487
HhaI GCGC 1 cut(s) 937
Hin1II CATG 4 cut(s) 332, 457, 574, 682
Hin6I GCGC 1 cut(s) 935
HinP1I GCGC 1 cut(s) 935
HincII GTYRAC 3 cut(s) 160, 271, 1048
HindII GTYRAC 3 cut(s) 160, 271, 1048
HindIII AAGCTT 3 cut(s) 701, 1115, 1202
HinfI GANTC 4 cut(s) 85, 167, 430, 437
HpaII CCGG 6 cut(s) 153, 624, 891, 941, 1061, 1181
HphI GGTGA 2 cut(s) 473, 1145
Hpy166II GTNNAC 7 cut(s) 68, 160, 271, 477, 871, 1048, 1153
Hpy188I TCNGA 4 cut(s) 16, 113, 524, 1209
Hpy8I GTNNAC 7 cut(s) 68, 160, 271, 477, 871, 1048, 1153
HpyAV CCTTC 1 cut(s) 214
HpyCH4III ACNGT 6 cut(s) 212, 397, 694, 898, 1006, 1214
HpyCH4IV ACGT 1 cut(s) 789
HpyCH4V TGCA 6 cut(s) 425, 488, 538, 707, 723, 911
HpyF10VI GCNNNNNNNGC 5 cut(s) 69, 281, 422, 572, 815
HpyF3I CTNAG 3 cut(s) 83, 110, 730
HpySE526I ACGT 1 cut(s) 789
Hsp92II CATG 4 cut(s) 332, 457, 574, 682
HspAI GCGC 1 cut(s) 935
Kpn2I TCCGGA 2 cut(s) 890, 940
Kzo9I GATC 6 cut(s) 307, 384, 407, 448, 763, 841
LguI GCTCTTC 2 cut(s) 47, 488
LmnI GCTCC 3 cut(s) 60, 138, 1183
Lsp1109I GCAGC 5 cut(s) 296, 409, 550, 550, 793
LweI GCATC 2 cut(s) 303, 434
MaeI CTAG 2 cut(s) 434, 902
MaeII ACGT 1 cut(s) 789
MaeIII GTNAC 2 cut(s) 781, 1169
MalI GATC 6 cut(s) 309, 386, 409, 450, 765, 843
MbiI CCGCTC 3 cut(s) 24, 40, 63
MboI GATC 6 cut(s) 307, 384, 407, 448, 763, 841
MboII GAAGA 5 cut(s) 34, 102, 326, 355, 505
MfeI CAATTG 1 cut(s) 656
MflI RGATCY 2 cut(s) 307, 384
MluCI AATT 6 cut(s) 239, 527, 552, 656, 883, 944
MlyI GAGTC 3 cut(s) 94, 176, 424
MmeI TCCRAC 1 cut(s) 375
MroI TCCGGA 2 cut(s) 890, 940
MseI TTAA 2 cut(s) 252, 381
MspA1I CMGCKG 1 cut(s) 52
MspCI CTTAAG 1 cut(s) 380
MspI CCGG 6 cut(s) 153, 624, 891, 941, 1061, 1181
MspR9I CCNGG 2 cut(s) 602, 1061
MunI CAATTG 1 cut(s) 656
Mva1269I GAATGC 1 cut(s) 1186
MvaI CCWGG 1 cut(s) 602
MwoI GCNNNNNNNGC 5 cut(s) 69, 281, 422, 572, 815
NciI CCSGG 1 cut(s) 1061
NdeII GATC 6 cut(s) 307, 384, 407, 448, 763, 841
NlaIII CATG 4 cut(s) 332, 457, 574, 682
NlaIV GGNNCC 2 cut(s) 134, 980
NmuCI GTSAC 1 cut(s) 1169
PagI TCATGA 1 cut(s) 678
PciSI GCTCTTC 2 cut(s) 47, 488
PcsI WCGNNNNNNNCGW 1 cut(s) 76
PctI GAATGC 1 cut(s) 1186
PfeI GAWTC 1 cut(s) 437
PflFI GACNNNGTC 3 cut(s) 72, 84, 143
PfoI TCCNGGA 1 cut(s) 1059
PinAI ACCGGT 1 cut(s) 623
PkrI GCNGC 7 cut(s) 39, 283, 286, 424, 540, 565, 808
PleI GAGTC 3 cut(s) 93, 175, 424
PpsI GAGTC 3 cut(s) 93, 175, 424
PpuMI RGGWCCY 1 cut(s) 726
Psp5II RGGWCCY 1 cut(s) 726
Psp6I CCWGG 1 cut(s) 600
PspGI CCWGG 1 cut(s) 600
PspN4I GGNNCC 2 cut(s) 134, 980
PspPI GGNCC 3 cut(s) 145, 726, 888
PspPPI RGGWCCY 1 cut(s) 726
PstI CTGCAG 1 cut(s) 725
PsuI RGATCY 2 cut(s) 307, 384
PsyI GACNNNGTC 3 cut(s) 72, 84, 143
RsaI GTAC 4 cut(s) 101, 227, 671, 1194
RsaNI GTAC 4 cut(s) 100, 226, 670, 1193
SapI GCTCTTC 2 cut(s) 47, 488
SaqAI TTAA 2 cut(s) 252, 381
SatI GCNGC 7 cut(s) 38, 282, 285, 423, 539, 564, 807
Sau3AI GATC 6 cut(s) 307, 384, 407, 448, 763, 841
Sau96I GGNCC 3 cut(s) 145, 726, 888
ScaI AGTACT 1 cut(s) 227
SchI GAGTC 3 cut(s) 94, 176, 424
ScrFI CCNGG 2 cut(s) 602, 1061
SfaNI GCATC 2 cut(s) 303, 434
SfcI CTRYAG 1 cut(s) 721
SinI GGWCC 3 cut(s) 145, 726, 888
SmlI CTYRAG 3 cut(s) 380, 984, 1118
SmoI CTYRAG 3 cut(s) 380, 984, 1118
Sse9I AATT 6 cut(s) 239, 527, 552, 656, 883, 944
SsiI CCGC 7 cut(s) 24, 38, 50, 63, 201, 281, 648
SspI AATATT 1 cut(s) 364
SspMI CTAG 2 cut(s) 434, 902
StyD4I CCNGG 2 cut(s) 600, 1059
StyI CCWWGG 1 cut(s) 759
TaaI ACNGT 6 cut(s) 212, 397, 694, 898, 1006, 1214
TaiI ACGT 1 cut(s) 792
TaqI TCGA 8 cut(s) 88, 128, 193, 297, 312, 410, 428, 447
TasI AATT 6 cut(s) 239, 527, 552, 656, 883, 944
TatI WGTACW 2 cut(s) 225, 1192
TauI GCSGC 2 cut(s) 40, 284
TfiI GAWTC 1 cut(s) 437
Tru1I TTAA 2 cut(s) 252, 381
Tru9I TTAA 2 cut(s) 252, 381
TscAI CASTG 1 cut(s) 640
TseFI GTSAC 1 cut(s) 1169
TseI GCWGC 5 cut(s) 284, 422, 538, 563, 806
Tsp45I GTSAC 1 cut(s) 1169
TspDTI ATGAA 6 cut(s) 112, 246, 345, 356, 506, 586
TspGWI ACGGA 2 cut(s) 137, 737
TspRI CASTG 1 cut(s) 640
Tth111I GACNNNGTC 3 cut(s) 72, 84, 143
Vha464I CTTAAG 1 cut(s) 380
VpaK11BI GGWCC 3 cut(s) 145, 726, 888
XapI RAATTY 1 cut(s) 944
XbaI TCTAGA 2 cut(s) 433, 901
XmiI GTMKAC 1 cut(s) 870
XspI CTAG 2 cut(s) 434, 902
ZrmI AGTACT 1 cut(s) 227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.