Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0003838

Physical Location & Seq

Genomic Coordinates Reverse (-)

11636476 .. 11639254

Gene Structure 2779 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G081200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1230 bp

ATGGAAGGAGGCTTGAACCATATGATCAAGACCCCATTAATCTTGTCATGTGAAGATGAAAGGACCAGCAAACATGGTTTAGTTGGAAGCAGTAACTCTGTCGCTGCTATGAAATGTGATTTCTTCTCCAAATTGCCTGACAAGGTTCGGTTTGGCTTCGATCCTGAGGCCCCTTTCCATCTTAACCTTTCTAAAACCACTGGCTTGATAGAAGGGGAAAGAGAATACTATGAGAAGCAATTTGCCACCCTAAGGTCTTTTGAGGAAGTTGACTCTCTAGAATCACCCCATGTCATTGATGAAGAGGAAGATCGAAAAGAACAAGCCCAGCATGAGAGAGCAATGAACATTTCTAATTGGGCAAACGTCTTTCTGCTTGCTTTTAAGGTATATGCTACACTACAGAGTGGATCCTTAGCTATTGCAGCATCAACACTAGATTCTTTGCCAGATCTTATGGCTGGTGGTATACTTTGGTTCACACACTTGTCAATGAAAAACATAAATATCTACAAGTACCCTATTGGGAAATTGAGAGTGCAACCAGTAGGCATCGTCGTATTCGCAGCTGTCATGGCTACTCTTGGCTTTCAAGTGCTTGTCCAGGCCCTAGAACAACTGATCAAGGACAAACCTTCTGAGAAGATGATTTCAGAAAACTTGATCTGGTTGTATGCCATCATGCTGACAGCTACTGGAGTAAAATTTTTCCTTCGGTGTTATTGCAGAAGCTCTGGAAACACAATTGTCCATGCATATGCAAAGGATCATTATTTTGATGTGGTAACAAACTTAGTTGGTTTGGTTGCTGCTGTTGTTGGTGATATATTCTGTTGGTGGATTGACCCTGTTGGGGCTATCATCCTAGCATTCTACACAATTTCCAATTGGTCCGGAACTGTGCTAGAAAATGCAGTTTCTCTGGTTGGACAATCAGCTCCTCCTCAAGTGTTGCAGAAATTGACATATCTCATCCTAAGGCACCACAGTTTAATCAGACGTGTCGATACAGTTCGTGCCTACACGTTCGGGGTTCTTTATTTCGTTGAGGTTGACATAGAACTGCCAGAAGATTTGCCTTTAAAAGAAGCTCATGCAATTGGAGAGTCATTGCAAATCAAGATCGAAGAGCTCCCAGAAGTCGAACGGGCGTTCGTTCATCTCGATTATGAATGTGACCACAAGCCAGAGCACTCTGTTCTGAGCAGGCTCCCCAGCAGCCATGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000041 GO:0000325 GO:0003006 GO:0003674 GO:0005215 GO:0005384 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006812 GO:0006828 GO:0007275 GO:0008150 GO:0008324 GO:0009705 GO:0009791 GO:0009845 GO:0010154 GO:0015075 GO:0015318 GO:0016020 GO:0022414 GO:0022857 GO:0022890 GO:0030001 GO:0031090 GO:0032501 GO:0032502 GO:0034220 GO:0035618 GO:0042995 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046915 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071421 GO:0090351 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:0120025

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_efflux ZT_dimer

Protein Analysis

410

Amino Acids

45.92

Weight (kDa)

5.53

Isoelectric Point (pI)

48.84

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003838)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G58060 AT3G58060
fragaria_vesca	FvH4_3g44550 FvH4_3g44550 FvH4_3g44550
malus_domestica	MD03G1011700.v1.1 MD11G1014600.v1.1
prunus_persica	Prupe.6G012100_v2.0.a1 Prupe.7G081200_v2.0.a1
pyrus_communis	pycom11g00990
rosa_chinensis	RchiOBHm_Chr3g0479221 RchiOBHm_Chr5g0081261
rosa_laevigata	RLG00000023593 RLG00000036922
rosa_multiflora	Rmu_sc0007768.1_g000006 Rmu_ssc0000432.1_g000058
rosa_roxburghii	Rroxscaffold_1G00002230 Rroxscaffold_6G00402530
rosa_rugosa	Rorug03G0172300 Rorug03G0172800 Rorug03G0172800 Rorug05G0475200 Rorug05G0475300
rosa_samantha	Rh3AG223900 Rh3BG256800 Rh3CG252500 Rh3DG248700 Rh5AG526900 Rh5BG551100 Rh5CG574000 Rh5DG561100
rosa_wichuraiana	Rw3G020070 Rw3G020530 Rw5G048980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	981
AccI	GTMKAC	1 cut(s)	469
AccIII	TCCGGA	1 cut(s)	893
AclWI	GGATC	4 cut(s)	155, 405, 418, 774
AcsI	RAATTY	1 cut(s)	704
AfaI	GTAC	1 cut(s)	518
AfiI	CCNNNNNNNGG	2 cut(s)	252, 853
AflIII	ACRYGT	2 cut(s)	1000, 1023
AgsI	TTSAA	2 cut(s)	16, 593
AjiI	CACGTC	1 cut(s)	1001
AjnI	CCWGG	1 cut(s)	603
AluBI	AGCT	7 cut(s)	419, 569, 692, 732, 938, 1091, 1132
AluI	AGCT	7 cut(s)	419, 569, 692, 732, 938, 1091, 1132
Alw21I	GWGCWC	2 cut(s)	1134, 1194
AlwI	GGATC	4 cut(s)	155, 405, 418, 774
AlwNI	CAGNNNCTG	1 cut(s)	695
Aor13HI	TCCGGA	1 cut(s)	893
AoxI	GGCC	2 cut(s)	168, 606
ApeKI	GCWGC	5 cut(s)	104, 425, 566, 809, 1218
ApoI	RAATTY	1 cut(s)	704
AseI	ATTAAT	1 cut(s)	38
AspS9I	GGNCC	4 cut(s)	63, 169, 607, 891
AsuHPI	GGTGA	2 cut(s)	276, 833
AvaII	GGWCC	2 cut(s)	63, 891
AxyI	CCTNAGG	3 cut(s)	165, 251, 977
BamHI	GGATCC	1 cut(s)	410
BanI	GGYRCC	1 cut(s)	981
BanII	GRGCYC	1 cut(s)	1134
Bbv12I	GWGCWC	2 cut(s)	1134, 1194
BbvI	GCAGC	4 cut(s)	91, 437, 578, 796
BccI	CCATC	2 cut(s)	186, 686
BciT130I	CCWGG	1 cut(s)	605
BclI	TGATCA	2 cut(s)	24, 621
BfaI	CTAG	5 cut(s)	278, 437, 611, 866, 905
BfmI	CTRYAG	1 cut(s)	401
BglII	AGATCT	1 cut(s)	451
BisI	GCNGC	5 cut(s)	105, 426, 567, 810, 1219
BlsI	GCNGC	5 cut(s)	106, 427, 568, 811, 1220
Bme1390I	CCNGG	1 cut(s)	605
Bme18I	GGWCC	2 cut(s)	63, 891
BmgBI	CACGTC	1 cut(s)	1001
BmgT120I	GGNCC	4 cut(s)	63, 169, 607, 891
BmiI	GGNNCC	4 cut(s)	171, 412, 983, 1211
BmrFI	CCNGG	1 cut(s)	605
BmsI	GCATC	2 cut(s)	437, 561
BpmI	CTGGAG	1 cut(s)	717
Bpu10I	CCTNAGC	1 cut(s)	415
BpuEI	CTTGAG	1 cut(s)	930
BsaWI	WCCGGW	1 cut(s)	893
Bsc4I	CCNNNNNNNGG	2 cut(s)	252, 853
Bse1I	ACTGG	3 cut(s)	205, 545, 700
Bse21I	CCTNAGG	3 cut(s)	165, 251, 977
Bse3DI	GCAATG	2 cut(s)	348, 1109
BseAI	TCCGGA	1 cut(s)	893
BseBI	CCWGG	1 cut(s)	605
BseGI	GGATG	2 cut(s)	861, 972
BseLI	CCNNNNNNNGG	2 cut(s)	252, 853
BseMI	GCAATG	2 cut(s)	348, 1109
BseMII	CTCAG	3 cut(s)	156, 630, 1193
BseNI	ACTGG	3 cut(s)	205, 545, 700
BseRI	GAGGAG	2 cut(s)	930, 933
BseXI	GCAGC	4 cut(s)	91, 437, 578, 796
BseYI	CCCAGC	2 cut(s)	327, 1214
BshFI	GGCC	2 cut(s)	170, 608
BshNI	GGYRCC	1 cut(s)	981
BsiHKAI	GWGCWC	2 cut(s)	1134, 1194
BsiSI	CCGG	1 cut(s)	894
BslI	CCNNNNNNNGG	2 cut(s)	252, 853
BsmI	GAATGC	1 cut(s)	869
BsnI	GGCC	2 cut(s)	170, 608
Bsp1286I	GDGCHC	2 cut(s)	1134, 1194
Bsp13I	TCCGGA	1 cut(s)	893
Bsp143I	GATC	9 cut(s)	24, 160, 310, 410, 451, 621, 663, 766, 1122
BspANI	GGCC	2 cut(s)	170, 608
BspCNI	CTCAG	3 cut(s)	157, 631, 1194
BspEI	TCCGGA	1 cut(s)	893
BspLI	GGNNCC	4 cut(s)	171, 412, 983, 1211
BspPI	GGATC	4 cut(s)	155, 405, 418, 774
BspQI	GCTCTTC	1 cut(s)	1122
BspT107I	GGYRCC	1 cut(s)	981
BsrDI	GCAATG	2 cut(s)	348, 1109
BsrI	ACTGG	3 cut(s)	205, 545, 700
BssMI	GATC	9 cut(s)	24, 160, 310, 410, 451, 621, 663, 766, 1122
BssNAI	GTATAC	1 cut(s)	470
Bst1107I	GTATAC	1 cut(s)	470
Bst2UI	CCWGG	1 cut(s)	605
Bst4CI	ACNGT	3 cut(s)	901, 989, 1012
Bst6I	CTCTTC	2 cut(s)	297, 1122
BstC8I	GCNNGC	2 cut(s)	378, 1208
BstDEI	CTNAG	7 cut(s)	165, 251, 415, 639, 793, 977, 1202
BstF5I	GGATG	2 cut(s)	861, 972
BstKTI	GATC	9 cut(s)	27, 163, 313, 413, 454, 624, 666, 769, 1125
BstMBI	GATC	9 cut(s)	24, 160, 310, 410, 451, 621, 663, 766, 1122
BstMWI	GCNNNNNNNGC	2 cut(s)	425, 575
BstNI	CCWGG	1 cut(s)	605
BstSCI	CCNGG	1 cut(s)	603
BstSFI	CTRYAG	1 cut(s)	401
BstV1I	GCAGC	4 cut(s)	91, 437, 578, 796
BstX2I	RGATCY	2 cut(s)	410, 451
BstYI	RGATCY	2 cut(s)	410, 451
BstZ17I	GTATAC	1 cut(s)	470
Bsu36I	CCTNAGG	3 cut(s)	165, 251, 977
BsuRI	GGCC	2 cut(s)	170, 608
BtrI	CACGTC	1 cut(s)	1001
BtsCI	GGATG	2 cut(s)	861, 972
BtsIMutI	CAGTG	1 cut(s)	198
Cac8I	GCNNGC	2 cut(s)	378, 1208
CaiI	CAGNNNCTG	1 cut(s)	695
Cfr13I	GGNCC	4 cut(s)	63, 169, 607, 891
Csp6I	GTAC	1 cut(s)	517
CviAII	CATG	9 cut(s)	48, 74, 290, 332, 574, 682, 752, 1094, 1223
CviQI	GTAC	1 cut(s)	517
DdeI	CTNAG	7 cut(s)	165, 251, 415, 639, 793, 977, 1202
DpnI	GATC	9 cut(s)	26, 162, 312, 412, 453, 623, 665, 768, 1124
DpnII	GATC	9 cut(s)	24, 160, 310, 410, 451, 621, 663, 766, 1122
DraI	TTTAAA	1 cut(s)	1083
Eam1104I	CTCTTC	2 cut(s)	297, 1122
EarI	CTCTTC	2 cut(s)	297, 1122
Ecl136II	GAGCTC	1 cut(s)	1132
Eco24I	GRGCYC	1 cut(s)	1134
Eco47I	GGWCC	2 cut(s)	63, 891
Eco53kI	GAGCTC	1 cut(s)	1132
Eco81I	CCTNAGG	3 cut(s)	165, 251, 977
EcoICRI	GAGCTC	1 cut(s)	1132
EcoO109I	RGGNCCY	2 cut(s)	169, 607
EcoRII	CCWGG	1 cut(s)	603
EcoT22I	ATGCAT	1 cut(s)	757
EcoT38I	GRGCYC	1 cut(s)	1134
FaeI	CATG	9 cut(s)	51, 77, 293, 335, 577, 685, 755, 1097, 1226
FatI	CATG	9 cut(s)	47, 73, 289, 331, 573, 681, 751, 1093, 1222
FauNDI	CATATG	2 cut(s)	21, 757
FbaI	TGATCA	2 cut(s)	24, 621
FblI	GTMKAC	1 cut(s)	469
Fnu4HI	GCNGC	5 cut(s)	105, 426, 567, 810, 1219
FokI	GGATG	2 cut(s)	848, 959
FriOI	GRGCYC	1 cut(s)	1134
Fsp4HI	GCNGC	5 cut(s)	105, 426, 567, 810, 1219
FspBI	CTAG	5 cut(s)	278, 437, 611, 866, 905
GluI	GCNGC	5 cut(s)	105, 426, 567, 810, 1219
GsaI	CCCAGC	2 cut(s)	331, 1218
GsuI	CTGGAG	1 cut(s)	717
HaeIII	GGCC	2 cut(s)	170, 608
HapII	CCGG	1 cut(s)	894
Hin1II	CATG	9 cut(s)	51, 77, 293, 335, 577, 685, 755, 1097, 1226
HincII	GTYRAC	2 cut(s)	271, 1054
HindII	GTYRAC	2 cut(s)	271, 1054
HinfI	GANTC	4 cut(s)	272, 281, 440, 1106
HpaII	CCGG	1 cut(s)	894
HphI	GGTGA	2 cut(s)	276, 833
Hpy166II	GTNNAC	4 cut(s)	271, 470, 480, 1054
Hpy188I	TCNGA	4 cut(s)	640, 655, 998, 1203
Hpy188III	TCNNGA	7 cut(s)	28, 164, 278, 735, 894, 1120, 1163
Hpy8I	GTNNAC	4 cut(s)	271, 470, 480, 1054
Hpy99I	CGWCG	1 cut(s)	560
HpyAV	CCTTC	3 cut(s)	206, 645, 722
HpyCH4III	ACNGT	3 cut(s)	901, 989, 1012
HpyCH4IV	ACGT	3 cut(s)	366, 1000, 1025
HpyCH4V	TGCA	9 cut(s)	425, 541, 726, 755, 761, 914, 955, 1097, 1114
HpyF10VI	GCNNNNNNNGC	2 cut(s)	425, 575
HpyF3I	CTNAG	7 cut(s)	165, 251, 415, 639, 793, 977, 1202
HpySE526I	ACGT	3 cut(s)	366, 1000, 1025
Hsp92II	CATG	9 cut(s)	51, 77, 293, 335, 577, 685, 755, 1097, 1226
Kpn2I	TCCGGA	1 cut(s)	893
Ksp22I	TGATCA	2 cut(s)	24, 621
Kzo9I	GATC	9 cut(s)	24, 160, 310, 410, 451, 621, 663, 766, 1122
LguI	GCTCTTC	1 cut(s)	1122
LmnI	GCTCC	3 cut(s)	943, 1137, 1215
Lsp1109I	GCAGC	4 cut(s)	91, 437, 578, 796
LweI	GCATC	2 cut(s)	437, 561
MaeI	CTAG	5 cut(s)	278, 437, 611, 866, 905
MaeII	ACGT	3 cut(s)	366, 1000, 1025
MaeIII	GTNAC	3 cut(s)	92, 784, 1175
MalI	GATC	9 cut(s)	26, 162, 312, 412, 453, 623, 665, 768, 1124
MboI	GATC	9 cut(s)	24, 160, 310, 410, 451, 621, 663, 766, 1122
MboII	GAAGA	7 cut(s)	65, 115, 314, 320, 655, 1082, 1139
MfeI	CAATTG	3 cut(s)	744, 886, 1098
MflI	RGATCY	2 cut(s)	410, 451
MhlI	GDGCHC	2 cut(s)	1134, 1194
MlyI	GAGTC	2 cut(s)	266, 1115
MmeI	TCCRAC	2 cut(s)	64, 907
MnlI	CCTC	6 cut(s)	160, 256, 298, 951, 954, 1042
Mph1103I	ATGCAT	1 cut(s)	757
MroI	TCCGGA	1 cut(s)	893
MseI	TTAA	6 cut(s)	38, 183, 384, 992, 1082, 1228
MslI	CAYNNNNRTG	1 cut(s)	756
MspA1I	CMGCKG	1 cut(s)	569
MspI	CCGG	1 cut(s)	894
MspR9I	CCNGG	1 cut(s)	605
MunI	CAATTG	3 cut(s)	744, 886, 1098
Mva1269I	GAATGC	1 cut(s)	869
MvaI	CCWGG	1 cut(s)	605
MwoI	GCNNNNNNNGC	2 cut(s)	425, 575
NdeI	CATATG	2 cut(s)	21, 757
NdeII	GATC	9 cut(s)	24, 160, 310, 410, 451, 621, 663, 766, 1122
NlaIII	CATG	9 cut(s)	51, 77, 293, 335, 577, 685, 755, 1097, 1226
NlaIV	GGNNCC	4 cut(s)	171, 412, 983, 1211
NmuCI	GTSAC	1 cut(s)	1175
NsiI	ATGCAT	1 cut(s)	757
PciSI	GCTCTTC	1 cut(s)	1122
PcsI	WCGNNNNNNNCGW	1 cut(s)	1161
PctI	GAATGC	1 cut(s)	869
PfeI	GAWTC	2 cut(s)	281, 440
PkrI	GCNGC	5 cut(s)	106, 427, 568, 811, 1220
PleI	GAGTC	2 cut(s)	266, 1114
PpsI	GAGTC	2 cut(s)	266, 1114
PshBI	ATTAAT	1 cut(s)	38
Psp124BI	GAGCTC	1 cut(s)	1134
Psp6I	CCWGG	1 cut(s)	603
PspFI	CCCAGC	2 cut(s)	327, 1214
PspGI	CCWGG	1 cut(s)	603
PspN4I	GGNNCC	4 cut(s)	171, 412, 983, 1211
PspPI	GGNCC	4 cut(s)	63, 169, 607, 891
PstNI	CAGNNNCTG	1 cut(s)	695
PsuI	RGATCY	2 cut(s)	410, 451
PvuII	CAGCTG	1 cut(s)	569
RsaI	GTAC	1 cut(s)	518
RsaNI	GTAC	1 cut(s)	517
RseI	CAYNNNNRTG	1 cut(s)	756
SacI	GAGCTC	1 cut(s)	1134
SapI	GCTCTTC	1 cut(s)	1122
SaqAI	TTAA	6 cut(s)	38, 183, 384, 992, 1082, 1228
SatI	GCNGC	5 cut(s)	105, 426, 567, 810, 1219
Sau3AI	GATC	9 cut(s)	24, 160, 310, 410, 451, 621, 663, 766, 1122
Sau96I	GGNCC	4 cut(s)	63, 169, 607, 891
SchI	GAGTC	2 cut(s)	266, 1115
ScrFI	CCNGG	1 cut(s)	605
SduI	GDGCHC	2 cut(s)	1134, 1194
SfaNI	GCATC	2 cut(s)	437, 561
SfcI	CTRYAG	1 cut(s)	401
SinI	GGWCC	2 cut(s)	63, 891
SmiMI	CAYNNNNRTG	1 cut(s)	756
SmlI	CTYRAG	1 cut(s)	945
SmoI	CTYRAG	1 cut(s)	945
SspMI	CTAG	5 cut(s)	278, 437, 611, 866, 905
SstI	GAGCTC	1 cut(s)	1134
StyD4I	CCNGG	1 cut(s)	603
TaaI	ACNGT	3 cut(s)	901, 989, 1012
TaiI	ACGT	3 cut(s)	369, 1003, 1028
TaqI	TCGA	6 cut(s)	159, 313, 1005, 1125, 1143, 1164
TfiI	GAWTC	2 cut(s)	281, 440
Tru1I	TTAA	6 cut(s)	38, 183, 384, 992, 1082, 1228
Tru9I	TTAA	6 cut(s)	38, 183, 384, 992, 1082, 1228
TscAI	CASTG	1 cut(s)	205
TseFI	GTSAC	1 cut(s)	1175
TseI	GCWGC	5 cut(s)	104, 425, 566, 809, 1218
Tsp45I	GTSAC	1 cut(s)	1175
TspDTI	ATGAA	7 cut(s)	72, 125, 315, 359, 509, 1148, 1185
TspRI	CASTG	1 cut(s)	205
VpaK11BI	GGWCC	2 cut(s)	63, 891
VspI	ATTAAT	1 cut(s)	38
XapI	RAATTY	1 cut(s)	704
XbaI	TCTAGA	1 cut(s)	277
XmiI	GTMKAC	1 cut(s)	469
XspI	CTAG	5 cut(s)	278, 437, 611, 866, 905
Zsp2I	ATGCAT	1 cut(s)	757

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.