Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0003083

Physical Location & Seq

Genomic Coordinates Reverse (-)

11611950 .. 11622262

Gene Structure 10313 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1123900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3342 bp

ATGAGCAGAAGGCATCTCCAAATTCTCTCTGTTAGGGTTCTCTCTGTGCTCGTGTTTTCCAGCTTCTTCTCCAGCTCGCCTTTGCCCCGTGCGGCGGGGCAGGATTCCGAAGGCGGCGGTGGAGGATATGATCTCGCCACCCAGCTCATCTTGAGCCGCTACTCCAATCTCACCCCTGTCTTCCGTGATGAACTCTTGAAAAAATTTGGCTTCTGCATTATCGACGTAGACGAGGATTTGAATGGGGCTTTCAATTTCTCAAAAGATTCAAGGTTCGTAACCAACTGCGCTAAAAAAATGGCAGGTGGAACAATTGGAGAGGTTATGGGTCGATTGTGCACAGCTGCAGAAATGAGGATGTACGCTGAAGGTTTATTTCAAACCCAGAAGACCACCTACTTGAAACCCAACAAGAACTGTAATCTGACTGTATGGATTTCTGGATGTGAGCCTGGGTGGGCTTGTGCTTCTGCTGAGCAAGTTGACCTGGAAAATCGAACGTATGTGCCTGTCAGAACTAACGAGTGTCAACCTTGTTGTGAGGGTTTCTTCTGCCCGCATGGTCTTACTTGCATGCTCCCTTGCCCAATGGGTGCTTACTGCCCACTTGCGAAACTCAACAACGGATCTGGTATATGTGAACCCTATCAGATACCTCCTGGGAAGCGAAACCATACTTGTGGAGGAGCAGATAAGTGGGCTGATGTCCTTAGTAGTAAAGAGGTATTCTGTACAGGTGGATCATATTGTCCGTCTACCATCCAAAAAATCCCTTGCAGTAGTGGACACTTTTGCAGGAAAGGTTCCACAACTCAGGAAGAATGTTTCCGGATGGCGACTTGTAAATCACAATCAGAAAATCAAAATATTACTGCATATGGTATCATGATTTTTGCTGGATTAATTTTCATCCTTCTCATTATATATAATTGTTCTGACCAAGTTCTCGCCACCCGAGAAAAAAGACAAGCGGAATCCAGGGAAAAAGCAGTTCAAAGTGTTAGAGAAAATGCACAAGCACGTGAAAAATGGAAATCTGCGAAAGACATTGCCAAGAAGCATGCAGTTGGACTGTCAACACAGTTTTCACGTACATTTTCTCGCAGAAAATCTACCAAGTCAGACCCGCTGAAAGGATTCGGACAGGCTAAACCTGGATCAGATGGTGCCTTGCCACCTATGCCAACCGGGATAGGTGAGCAATCAGCTGGAACATCCAAAGGAAAGATGAAGGAAAAAAGCAACCTCACACAAATGATAAATGCAATCGAGGGAGACCCAAATAGTCATGAAGGCTTCAATCTAGAAATAGGAGATAAAAACATTAAAAAGCAAGCACCAAAAGCACCGAAAGCACCGAAAGGTAAGCAGTTGCATACTCAGAGTCAAATTTTCAAGTATGCATATGGCCAAATTGAGAAGGAAAAGGCATTACAGGAGCAGAATGCAAACTTAACCTTCTCTGGGGTCATACAAATGGCCAATGATATTGAAATCAGCAAGAGACCTCCAATTGAGGTTGCTTTTAAAGATCTAACTCTCACGTTGAAAGGGAAGAATAAACATCTTATGAGGTGTGTGACTGGGAAAATATCGCCTGGCCGGGTTTCAGCTGTCATGGGTCCATCTGGGGCTGGAAAAACAACATTTCTTTCTGCCTTGGTTGGAAAAGTGAGGGGGTGCACAATGAGTGGTATGATACTTGTAAATGGAAAGATGGAATCTATCCATTGTTACAAGAAAATCATTGGTTTTGTGCCACAAGATGATATTGTGCATGGAAATTTGACAGTTGAAGAGAATCTCTGGTTTAGCGCAAGATGCAGACTCTCTGCTGATCTGCTTAAACCAGAAAAGGTCTTAGTTGTTGAAAGAGTTATTGAATCCTTGGGCCTGCAGGCAGTGCGGGATTCCCTGGTTGGAACGGTGGAGAAGCGAGGTATCTCTGGAGGTCAAAGAAAGCGAGTAAATGTTGGGCTAGAAATGGTCATGGAACCATCACTTCTAATTTTAGATGAACCTACATCGGGTTTGGATAGTTCGTCTTCTAATTTATTACTAAAAGCTCTTCGACGTGAGGCTCTTGAAGGAGTTAACATTTGCATGGTTGTCCACCAACCTAGCTATACCTTGTTCAAGATGTTTGATGATTTGATCCTTCTGGCTAAAGGGGGACTTACGGTGTATCATGGATCGGTGAAGAAAGTTGAAGAGTACTTTGCTAGTCTTGGGATTACTGTCCCTGAGCGTGTCAACCCTCCAGACTATTTCATTGATATTTTGGAAGGCATAGTAAAACCAAATACAACCACTGGGGTGACCTATAAGCAACTACCTGTTAGATGGATGCTTCATAATGGGTACCCAGTTCCTATGGATATGCTTCAGAGTGTTGATGGGATGGCTGCATCAGCTGGTGAAAGTTCAGCTCATGGAGGAAGTACTCCAGACGCTGGATCTGAGGGACAGTCCTTTTCTGGAGACTTTTGGCAGGATGTTAAGTGTCATGTTGAGGTGAATAAGGACGCTATACAACATAATTTTTTAAAGTCAAACGACTTATCTGAGCGGACTACCCCTGGCGTGTTCCAGCAATATAGATACTTCCTCGGAAGGGGAGGTAAGCAGCGGTTACGAGAATCTAGAACACAAGCTGTAGATTTTCTTATTTTATTGCTAGCTGGAATCTGCTTAGGAACACTTGCCAAAGTGAGCGATGAAACCTTTGGTGCACTCGGTTATACATACACAGTCATAGCAGTTTCTCTTCTGTGCAAGATTGCTGCTTTGAGAACGTTTGGACTGGATAAGTTGCACTACTGGAGAGAGAGCTCTTCTGGCATGAGTAGCTTGGCGTACTTTCTTTCAAAGGATACAGTTGACCATTTCAATACAATCATTAAGCCTCTTGTGTATCTTTCTATGTTCTATTTCTTCAACAATCCAAGATCATCTATCATAGATAATTACATTGTTTTGATTTGTCTGGTATACTGTGTAACCGGTATAGCTTATGCGTTGTCCATCTACCTGGCACCTGGTCCAGCCCAACTGTGGTCAGTACTTCTTCCAGTCGTTTTGACTCTGATCGCAAACTACAACGAGAACAAATTTGTTTCAAGAATAGCTGATTTGTGCTACACTAAGTGGGCTTTGGAAGCTTTTGTCATATCAAATGCCAAAAGGTACTCTGGAGTGTGGCTAATAACGCGATGCGGTTCACTTATGAAAAATGGTTATGATCTCAATCATTGGAACCGTAGTATAATCTTCCTCGTCATCACCGGTATTGTTTTTCGAGGGATTGCGTACTTTTTAATGGTACTGTTGCAAAAGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

1114

Amino Acids

122.67

Weight (kDa)

9.02

Isoelectric Point (pI)

40.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	527 - 676	7.3e-23	ABC transporter
ABC2_membrane_7	PF19055	705 - 1113	5.1e-227	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003083)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60740
fragaria_vesca	FvH4_3g31510 FvH4_3g31510 FvH4_3g31510 FvH4_3g31510 FvH4_3g31510 FvH4_3g31510 FvH4_3g31510 FvH4_3g31510 FvH4_3g31510
malus_domestica	MD03G1123900.v1.1 MD11G1140900.v1.1
prunus_persica	Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1
pyrus_communis	pycom11g11690
rosa_chinensis	RchiOBHm_Chr5g0058181
rosa_laevigata	RLG00000035201
rosa_multiflora	Rmu_co8117600.1_g000001 Rmu_sc0000367.1_g000039
rosa_roxburghii	Rroxscaffold_1G00022350 Rroxscaffold_1G00072570
rosa_rugosa	Rorug04G0431300 Rorug05G0312500 Rorug05G0312600
rosa_samantha	Rh5AG033200 Rh5AG380400 Rh5BG391600 Rh5CG035900 Rh5CG415600 Rh5DG028700
rosa_wichuraiana	Rw5G035820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	293
Acc36I	ACCTGC	1 cut(s)	293
Acc65I	GGTACC	1 cut(s)	2361
AccB1I	GGYRCC	3 cut(s)	1166, 2361, 3034
AccB7I	CCANNNNNTGG	1 cut(s)	2453
AccBSI	CCGCTC	1 cut(s)	2569
AccI	GTMKAC	3 cut(s)	228, 755, 2991
AccII	CGCG	1 cut(s)	3211
AccIII	TCCGGA	1 cut(s)	828
AclI	AACGTT	1 cut(s)	2795
AclWI	GGATC	6 cut(s)	634, 748, 1165, 2149, 2200, 2464
AcoI	YGGCCR	3 cut(s)	1408, 1479, 1600
AcsI	RAATTY	5 cut(s)	21, 203, 1389, 1783, 3110
AcuI	CTGAAG	2 cut(s)	387, 2369
AcvI	CACGTG	1 cut(s)	1022
AdeI	CACNNNGTG	1 cut(s)	3147
AfiI	CCNNNNNNNGG	7 cut(s)	94, 1133, 1464, 2027, 2453, 2614, 3054
AgeI	ACCGGT	2 cut(s)	3002, 3284
AjiI	CACGTC	1 cut(s)	2075
AleI	CACNNNNGTG	1 cut(s)	2315
Alw21I	GWGCWC	5 cut(s)	51, 341, 1685, 2734, 2834
Alw26I	GTCTC	3 cut(s)	1269, 1498, 2475
Alw44I	GTGCAC	3 cut(s)	337, 1681, 2730
AlwI	GGATC	6 cut(s)	634, 748, 1165, 2149, 2200, 2464
AlwNI	CAGNNNCTG	1 cut(s)	2453
Ama87I	CYCGRG	1 cut(s)	954
Aor13HI	TCCGGA	1 cut(s)	828
AoxI	GGCC	4 cut(s)	1408, 1479, 1600, 1891
ApaLI	GTGCAC	3 cut(s)	337, 1681, 2730
ApeKI	GCWGC	4 cut(s)	344, 2405, 2626, 2783
ApoI	RAATTY	5 cut(s)	21, 203, 1389, 1783, 3110
AseI	ATTAAT	1 cut(s)	902
AsiGI	ACCGGT	2 cut(s)	3002, 3284
Asp700I	GAANNNNTTC	1 cut(s)	1136
Asp718I	GGTACC	1 cut(s)	2361
AspLEI	GCGC	2 cut(s)	290, 1817
AspS9I	GGNCC	3 cut(s)	1622, 1891, 3041
AsuC2I	CCSGG	2 cut(s)	1189, 1604
AsuHPI	GGTGA	7 cut(s)	163, 1208, 2209, 2329, 2429, 2527, 3274
AsuNHI	GCTAGC	1 cut(s)	2677
AvaI	CYCGRG	1 cut(s)	954
AvaII	GGWCC	2 cut(s)	1622, 3041
BaeGI	GKGCMC	3 cut(s)	341, 1685, 2734
BalI	TGGCCA	2 cut(s)	1410, 1481
BanI	GGYRCC	3 cut(s)	1166, 2361, 3034
BanII	GRGCYC	1 cut(s)	2834
BarI	GAAGNNNNNNTAC	2 cut(s)	380, 412
BauI	CACGAG	1 cut(s)	50
BbrPI	CACGTG	1 cut(s)	1022
BbsI	GAAGAC	3 cut(s)	172, 395, 2037
Bbv12I	GWGCWC	5 cut(s)	51, 341, 1685, 2734, 2834
BbvI	GCAGC	4 cut(s)	331, 2392, 2638, 2770
BciVI	GTATCC	1 cut(s)	2866
BcnI	CCSGG	2 cut(s)	1189, 1604
BcoDI	GTCTC	3 cut(s)	1269, 1498, 2475
BfaI	CTAG	6 cut(s)	1304, 1979, 2121, 2223, 2643, 2678
BfmI	CTRYAG	3 cut(s)	345, 1895, 2655
BfuAI	ACCTGC	1 cut(s)	293
BfuI	GTATCC	1 cut(s)	2866
BglII	AGATCT	1 cut(s)	1531
BisI	GCNGC	7 cut(s)	93, 115, 157, 345, 2406, 2627, 2784
BlpI	GCTNAGC	1 cut(s)	474
BlsI	GCNGC	7 cut(s)	94, 116, 158, 346, 2407, 2628, 2785
BmcAI	AGTACT	3 cut(s)	2216, 2443, 3063
Bme18I	GGWCC	2 cut(s)	1622, 3041
BmeT110I	CYCGRG	1 cut(s)	954
BmgBI	CACGTC	1 cut(s)	2075
BmgT120I	GGNCC	3 cut(s)	1622, 1891, 3041
BmiI	GGNNCC	7 cut(s)	805, 1168, 1623, 1995, 2363, 3036, 3257
BmrI	ACTGGG	3 cut(s)	1593, 2322, 2360
BmsI	GCATC	5 cut(s)	22, 1811, 2337, 2417, 3203
BmtI	GCTAGC	1 cut(s)	2681
BmuI	ACTGGG	3 cut(s)	1593, 2322, 2360
BpiI	GAAGAC	3 cut(s)	172, 395, 2037
BpmI	CTGGAG	7 cut(s)	55, 1968, 2244, 2430, 2499, 2842, 3213
Bpu10I	CCTNAGC	2 cut(s)	2244, 2692
Bpu1102I	GCTNAGC	1 cut(s)	474
BpuEI	CTTGAG	1 cut(s)	172
BpuMI	CCSGG	2 cut(s)	1189, 1604
BsaAI	YACGTR	2 cut(s)	1022, 1091
BsaBI	GATNNNNATC	1 cut(s)	3246
BsaI	GGTCTC	2 cut(s)	1269, 1498
BsaJI	CCNNGG	8 cut(s)	452, 659, 978, 1659, 1887, 1914, 2578, 2608
BsaWI	WCCGGW	3 cut(s)	828, 3002, 3284
Bsc4I	CCNNNNNNNGG	7 cut(s)	94, 1133, 1464, 2027, 2453, 2614, 3054
Bse118I	RCCGGY	2 cut(s)	3002, 3284
Bse1I	ACTGG	6 cut(s)	1588, 2317, 2366, 2808, 2825, 3071
Bse3DI	GCAATG	1 cut(s)	1047
Bse8I	GATNNNNATC	1 cut(s)	3246
BseAI	TCCGGA	1 cut(s)	828
BseDI	CCNNGG	8 cut(s)	452, 659, 978, 1659, 1887, 1914, 2578, 2608
BseGI	GGATG	9 cut(s)	363, 449, 759, 837, 909, 1214, 2352, 2406, 2500
BseJI	GATNNNNATC	1 cut(s)	3246
BseLI	CCNNNNNNNGG	7 cut(s)	94, 1133, 1464, 2027, 2453, 2614, 3054
BseMI	GCAATG	1 cut(s)	1047
BseMII	CTCAG	6 cut(s)	465, 827, 1394, 2235, 2451, 2556
BseNI	ACTGG	6 cut(s)	1588, 2317, 2366, 2808, 2825, 3071
BseRI	GAGGAG	1 cut(s)	699
BseSI	GKGCMC	3 cut(s)	341, 1685, 2734
BseXI	GCAGC	4 cut(s)	331, 2392, 2638, 2770
BseYI	CCCAGC	1 cut(s)	141
Bsh1236I	CGCG	1 cut(s)	3211
BshFI	GGCC	4 cut(s)	1410, 1481, 1602, 1893
BshNI	GGYRCC	3 cut(s)	1166, 2361, 3034
BshTI	ACCGGT	2 cut(s)	3002, 3284
BsiHKAI	GWGCWC	5 cut(s)	51, 341, 1685, 2734, 2834
BsiHKCI	CYCGRG	1 cut(s)	954
BsiSI	CCGG	5 cut(s)	829, 1188, 1603, 3003, 3285
BslFI	GGGAC	3 cut(s)	2187, 2225, 2478
BslI	CCNNNNNNNGG	7 cut(s)	94, 1133, 1464, 2027, 2453, 2614, 3054
BsmAI	GTCTC	3 cut(s)	1269, 1498, 2475
BsmFI	GGGAC	3 cut(s)	2187, 2225, 2478
BsmI	GAATGC	1 cut(s)	1450
BsnI	GGCC	4 cut(s)	1410, 1481, 1602, 1893
Bso31I	GGTCTC	2 cut(s)	1269, 1498
BsoBI	CYCGRG	1 cut(s)	954
Bsp1286I	GDGCHC	5 cut(s)	51, 341, 1685, 2734, 2834
Bsp13I	TCCGGA	1 cut(s)	828
Bsp1407I	TGTACA	1 cut(s)	731
Bsp1720I	GCTNAGC	1 cut(s)	474
BspANI	GGCC	4 cut(s)	1410, 1481, 1602, 1893
BspCNI	CTCAG	6 cut(s)	466, 826, 1393, 2236, 2452, 2557
BspEI	TCCGGA	1 cut(s)	828
BspFNI	CGCG	1 cut(s)	3211
BspHI	TCATGA	2 cut(s)	885, 1288
BspLI	GGNNCC	7 cut(s)	805, 1168, 1623, 1995, 2363, 3036, 3257
BspMAI	CTGCAG	2 cut(s)	349, 1899
BspMI	ACCTGC	1 cut(s)	293
BspOI	GCTAGC	1 cut(s)	2681
BspPI	GGATC	6 cut(s)	634, 748, 1165, 2149, 2200, 2464
BspQI	GCTCTTC	2 cut(s)	2073, 2839
BspT107I	GGYRCC	3 cut(s)	1166, 2361, 3034
BspTNI	GGTCTC	2 cut(s)	1269, 1498
BsrBI	CCGCTC	1 cut(s)	2569
BsrDI	GCAATG	1 cut(s)	1047
BsrFI	RCCGGY	2 cut(s)	3002, 3284
BsrGI	TGTACA	1 cut(s)	731
BsrI	ACTGG	6 cut(s)	1588, 2317, 2366, 2808, 2825, 3071
BssAI	RCCGGY	2 cut(s)	3002, 3284
BssECI	CCNNGG	8 cut(s)	452, 659, 978, 1659, 1887, 1914, 2578, 2608
BssNAI	GTATAC	1 cut(s)	2992
BssSI	CACGAG	1 cut(s)	50
BssT1I	CCWWGG	2 cut(s)	1659, 1887
Bst1107I	GTATAC	1 cut(s)	2992
Bst2BI	CACGAG	1 cut(s)	50
Bst6I	CTCTTC	5 cut(s)	1791, 2073, 2205, 2772, 2839
BstAPI	GCANNNNNTGC	1 cut(s)	1903
BstAUI	TGTACA	1 cut(s)	731
BstBAI	YACGTR	2 cut(s)	1022, 1091
BstC8I	GCNNGC	8 cut(s)	77, 557, 575, 1062, 1335, 1895, 1899, 2679
BstEII	GGTNACC	1 cut(s)	2317
BstF5I	GGATG	9 cut(s)	363, 449, 759, 837, 909, 1214, 2352, 2406, 2500
BstFNI	CGCG	1 cut(s)	3211
BstHHI	GCGC	2 cut(s)	290, 1817
BstMAI	GTCTC	3 cut(s)	1269, 1498, 2475
BstNSI	RCATGY	2 cut(s)	577, 1064
BstPI	GGTNACC	1 cut(s)	2317
BstSFI	CTRYAG	3 cut(s)	345, 1895, 2655
BstSLI	GKGCMC	3 cut(s)	341, 1685, 2734
BstUI	CGCG	1 cut(s)	3211
BstV1I	GCAGC	4 cut(s)	331, 2392, 2638, 2770
BstV2I	GAAGAC	3 cut(s)	172, 395, 2037
BstX2I	RGATCY	3 cut(s)	626, 1531, 2456
BstXI	CCANNNNNNTGG	2 cut(s)	680, 3031
BstYI	RGATCY	3 cut(s)	626, 1531, 2456
BstZ17I	GTATAC	1 cut(s)	2992
BsuI	GTATCC	1 cut(s)	2866
BsuRI	GGCC	4 cut(s)	1410, 1481, 1602, 1893
BtgZI	GCGATG	2 cut(s)	2730, 3226
BtrI	CACGTC	1 cut(s)	2075
BtsCI	GGATG	9 cut(s)	363, 449, 759, 837, 909, 1214, 2352, 2406, 2500
BtsI	GCAGTG	1 cut(s)	1908
BtsIMutI	CAGTG	2 cut(s)	1908, 2310
BveI	ACCTGC	1 cut(s)	293
Cac8I	GCNNGC	8 cut(s)	77, 557, 575, 1062, 1335, 1895, 1899, 2679
CaiI	CAGNNNCTG	1 cut(s)	2453
CciI	TCATGA	2 cut(s)	885, 1288
CfoI	GCGC	2 cut(s)	290, 1817
Cfr10I	RCCGGY	2 cut(s)	3002, 3284
Cfr13I	GGNCC	3 cut(s)	1622, 1891, 3041
CseI	GACGC	2 cut(s)	2459, 2534
CsiI	ACCWGGT	1 cut(s)	3037
CspAI	ACCGGT	2 cut(s)	3002, 3284
DraI	TTTAAA	2 cut(s)	1528, 2547
DraIII	CACNNNGTG	1 cut(s)	3147
EaeI	YGGCCR	3 cut(s)	1408, 1479, 1600
Eam1104I	CTCTTC	5 cut(s)	1791, 2073, 2205, 2772, 2839
EarI	CTCTTC	5 cut(s)	1791, 2073, 2205, 2772, 2839
Ecl136II	GAGCTC	1 cut(s)	2832
Eco130I	CCWWGG	2 cut(s)	1659, 1887
Eco24I	GRGCYC	1 cut(s)	2834
Eco31I	GGTCTC	2 cut(s)	1269, 1498
Eco47I	GGWCC	2 cut(s)	1622, 3041
Eco53kI	GAGCTC	1 cut(s)	2832
Eco57I	CTGAAG	2 cut(s)	387, 2369
Eco72I	CACGTG	1 cut(s)	1022
Eco88I	CYCGRG	1 cut(s)	954
Eco91I	GGTNACC	1 cut(s)	2317
EcoICRI	GAGCTC	1 cut(s)	2832
EcoO65I	GGTNACC	1 cut(s)	2317
EcoT14I	CCWWGG	2 cut(s)	1659, 1887
EcoT22I	ATGCAT	1 cut(s)	1405
EcoT38I	GRGCYC	1 cut(s)	2834
ErhI	CCWWGG	2 cut(s)	1659, 1887
FalI	AAGNNNNNCTT	2 cut(s)	2160, 2192
FaqI	GGGAC	3 cut(s)	2187, 2225, 2478
FauI	CCCGC	4 cut(s)	88, 564, 1134, 1899
FauNDI	CATATG	2 cut(s)	877, 1405
FblI	GTMKAC	3 cut(s)	228, 755, 2991
Fnu4HI	GCNGC	7 cut(s)	93, 115, 157, 345, 2406, 2627, 2784
FokI	GGATG	9 cut(s)	370, 456, 746, 844, 896, 1201, 2359, 2413, 2507
FriOI	GRGCYC	1 cut(s)	2834
Fsp4HI	GCNGC	7 cut(s)	93, 115, 157, 345, 2406, 2627, 2784
FspBI	CTAG	6 cut(s)	1304, 1979, 2121, 2223, 2643, 2678
GlaI	GCGC	2 cut(s)	289, 1816
GluI	GCNGC	7 cut(s)	93, 115, 157, 345, 2406, 2627, 2784
GsaI	CCCAGC	1 cut(s)	145
GsuI	CTGGAG	7 cut(s)	55, 1968, 2244, 2430, 2499, 2842, 3213
HaeIII	GGCC	4 cut(s)	1410, 1481, 1602, 1893
HapII	CCGG	5 cut(s)	829, 1188, 1603, 3003, 3285
HgaI	GACGC	2 cut(s)	2459, 2534
HhaI	GCGC	2 cut(s)	290, 1817
Hin6I	GCGC	2 cut(s)	288, 1815
HinP1I	GCGC	2 cut(s)	288, 1815
HincII	GTYRAC	6 cut(s)	484, 530, 1077, 2095, 2254, 2881
HindII	GTYRAC	6 cut(s)	484, 530, 1077, 2095, 2254, 2881
HindIII	AAGCTT	1 cut(s)	3159
HpaI	GTTAAC	1 cut(s)	2095
HpaII	CCGG	5 cut(s)	829, 1188, 1603, 3003, 3285
HphI	GGTGA	7 cut(s)	163, 1208, 2209, 2329, 2429, 2527, 3274
Hpy99I	CGWCG	2 cut(s)	227, 2076
HpyCH4IV	ACGT	7 cut(s)	225, 500, 1021, 1090, 1544, 2074, 2795
HpySE526I	ACGT	7 cut(s)	225, 500, 1021, 1090, 1544, 2074, 2795
HspAI	GCGC	2 cut(s)	288, 1815
Kpn2I	TCCGGA	1 cut(s)	828
KpnI	GGTACC	1 cut(s)	2365
KspAI	GTTAAC	1 cut(s)	2095
LguI	GCTCTTC	2 cut(s)	2073, 2839
LmnI	GCTCC	3 cut(s)	582, 686, 1438
Lsp1109I	GCAGC	4 cut(s)	331, 2392, 2638, 2770
LweI	GCATC	5 cut(s)	22, 1811, 2337, 2417, 3203
MabI	ACCWGGT	1 cut(s)	3037
MaeI	CTAG	6 cut(s)	1304, 1979, 2121, 2223, 2643, 2678
MaeII	ACGT	7 cut(s)	225, 500, 1021, 1090, 1544, 2074, 2795
MaeIII	GTNAC	6 cut(s)	277, 1579, 1733, 2317, 2631, 2998
MbiI	CCGCTC	1 cut(s)	2569
MfeI	CAATTG	2 cut(s)	312, 1512
MflI	RGATCY	3 cut(s)	626, 1531, 2456
MhlI	GDGCHC	5 cut(s)	51, 341, 1685, 2734, 2834
MlsI	TGGCCA	2 cut(s)	1410, 1481
MluNI	TGGCCA	2 cut(s)	1410, 1481
MlyI	GAGTC	3 cut(s)	1393, 1821, 3076
MmeI	TCCRAC	3 cut(s)	1048, 1645, 1900
Mox20I	TGGCCA	2 cut(s)	1410, 1481
Mph1103I	ATGCAT	1 cut(s)	1405
MroI	TCCGGA	1 cut(s)	828
MroXI	GAANNNNTTC	1 cut(s)	1136
MscI	TGGCCA	2 cut(s)	1410, 1481
MslI	CAYNNNNRTG	5 cut(s)	678, 1253, 1475, 2102, 2315
Msp20I	TGGCCA	2 cut(s)	1410, 1481
MspA1I	CMGCKG	6 cut(s)	344, 1129, 1208, 1613, 2414, 2629
MspI	CCGG	5 cut(s)	829, 1188, 1603, 3003, 3285
MunI	CAATTG	2 cut(s)	312, 1512
Mva1269I	GAATGC	1 cut(s)	1450
MvnI	CGCG	1 cut(s)	3211
NciI	CCSGG	2 cut(s)	1189, 1604
NdeI	CATATG	2 cut(s)	877, 1405
NheI	GCTAGC	1 cut(s)	2677
NlaIV	GGNNCC	7 cut(s)	805, 1168, 1623, 1995, 2363, 3036, 3257
NmuCI	GTSAC	2 cut(s)	1579, 2317
NsiI	ATGCAT	1 cut(s)	1405
NspI	RCATGY	2 cut(s)	577, 1064
OliI	CACNNNNGTG	1 cut(s)	2315
PaeI	GCATGC	2 cut(s)	577, 1064
PagI	TCATGA	2 cut(s)	885, 1288
PaqCI	CACCTGC	1 cut(s)	293
PciSI	GCTCTTC	2 cut(s)	2073, 2839
PcsI	WCGNNNNNNNCGW	1 cut(s)	228
PctI	GAATGC	1 cut(s)	1450
PdmI	GAANNNNTTC	1 cut(s)	1136
PflMI	CCANNNNNTGG	1 cut(s)	2453
PinAI	ACCGGT	2 cut(s)	3002, 3284
PkrI	GCNGC	7 cut(s)	94, 116, 158, 346, 2407, 2628, 2785
PleI	GAGTC	3 cut(s)	1392, 1821, 3076
PmaCI	CACGTG	1 cut(s)	1022
PmlI	CACGTG	1 cut(s)	1022
PpsI	GAGTC	3 cut(s)	1392, 1821, 3076
Ppu21I	YACGTR	2 cut(s)	1022, 1091
PshBI	ATTAAT	1 cut(s)	902
Psp124BI	GAGCTC	1 cut(s)	2834
Psp1406I	AACGTT	1 cut(s)	2795
PspCI	CACGTG	1 cut(s)	1022
PspEI	GGTNACC	1 cut(s)	2317
PspFI	CCCAGC	1 cut(s)	141
PspN4I	GGNNCC	7 cut(s)	805, 1168, 1623, 1995, 2363, 3036, 3257
PspPI	GGNCC	3 cut(s)	1622, 1891, 3041
PstI	CTGCAG	2 cut(s)	349, 1899
PstNI	CAGNNNCTG	1 cut(s)	2453
PsuI	RGATCY	3 cut(s)	626, 1531, 2456
PvuII	CAGCTG	4 cut(s)	344, 1208, 1613, 2414
RseI	CAYNNNNRTG	5 cut(s)	678, 1253, 1475, 2102, 2315
SacI	GAGCTC	1 cut(s)	2834
SapI	GCTCTTC	2 cut(s)	2073, 2839
SatI	GCNGC	7 cut(s)	93, 115, 157, 345, 2406, 2627, 2784
Sau96I	GGNCC	3 cut(s)	1622, 1891, 3041
SbfI	CCTGCAGG	1 cut(s)	1899
ScaI	AGTACT	3 cut(s)	2216, 2443, 3063
SchI	GAGTC	3 cut(s)	1393, 1821, 3076
SdaI	CCTGCAGG	1 cut(s)	1899
SduI	GDGCHC	5 cut(s)	51, 341, 1685, 2734, 2834
SexAI	ACCWGGT	1 cut(s)	3037
SfaNI	GCATC	5 cut(s)	22, 1811, 2337, 2417, 3203
SfcI	CTRYAG	3 cut(s)	345, 1895, 2655
SinI	GGWCC	2 cut(s)	1622, 3041
SmiMI	CAYNNNNRTG	5 cut(s)	678, 1253, 1475, 2102, 2315
SmlI	CTYRAG	1 cut(s)	151
SmoI	CTYRAG	1 cut(s)	151
SphI	GCATGC	2 cut(s)	577, 1064
Sse8387I	CCTGCAGG	1 cut(s)	1899
SspI	AATATT	1 cut(s)	868
SspMI	CTAG	6 cut(s)	1304, 1979, 2121, 2223, 2643, 2678
SstI	GAGCTC	1 cut(s)	2834
StyI	CCWWGG	2 cut(s)	1659, 1887
TaiI	ACGT	7 cut(s)	228, 503, 1024, 1093, 1547, 2077, 2798
TaqI	TCGA	6 cut(s)	222, 331, 496, 1269, 2071, 3298
TatI	WGTACW	4 cut(s)	731, 2214, 2441, 3061
TauI	GCSGC	3 cut(s)	95, 117, 159
TscAI	CASTG	2 cut(s)	1908, 2317
TseFI	GTSAC	2 cut(s)	1579, 2317
TseI	GCWGC	4 cut(s)	344, 2405, 2626, 2783
Tsp45I	GTSAC	2 cut(s)	1579, 2317
TspDTI	ATGAA	9 cut(s)	204, 898, 1244, 1305, 2031, 2260, 2342, 2733, 3242
TspGWI	ACGGA	3 cut(s)	173, 639, 741
TspRI	CASTG	2 cut(s)	1908, 2317
Van91I	CCANNNNNTGG	1 cut(s)	2453
VneI	GTGCAC	3 cut(s)	337, 1681, 2730
VpaK11BI	GGWCC	2 cut(s)	1622, 3041
VspI	ATTAAT	1 cut(s)	902
XapI	RAATTY	5 cut(s)	21, 203, 1389, 1783, 3110
XbaI	TCTAGA	2 cut(s)	1303, 2642
XceI	RCATGY	2 cut(s)	577, 1064
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3051
XmiI	GTMKAC	3 cut(s)	228, 755, 2991
XmnI	GAANNNNTTC	1 cut(s)	1136
XspI	CTAG	6 cut(s)	1304, 1979, 2121, 2223, 2643, 2678
ZrmI	AGTACT	3 cut(s)	2216, 2443, 3063
Zsp2I	ATGCAT	1 cut(s)	1405

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.