Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003083

Physical Location & Seq

Genomic Coordinates Forward (+)

62349417 .. 62360775

Gene Structure 11359 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ33488

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3375 bp

ATGTTCAGCAGAGAGCACCTCTTTCTCTCTCTTAGGGTTCTTCTCCATGTGCTCGCTCTCAGCCTTGTTTGGCCCCCGGCGCCGCGTGTTTTCAGCCAGGACGTCGGCGGCGGCGATGGCGGTGGTGGAGGCGGAGGCGGAGGCGATGGCGATGTCGATGTCGGTGGTGGTGGAGGAGGAGACGGAGTCTCTGCCGGGTATAAGGGCTTCACCACCGAACTCATCTTGAGTCGTTTCTCCAATGTCACCCCCATTCTCAAAGATGAACTCAAGGATTCGTTCAGCTACTGCGTCATTGACGTAGACGAGGATTGGAATGGGGCTTTCAATTTCTCAGACAATGCAACATTCATTACCAACTGCGCCAAAAAAATGAAAGGTGGAGGTTTGGGAATGATTACGCAGCGGTTGTGCACTTTTAAAGAATTATCGATGTATGGTGAAAGTTTAGTACAAGTCAAGAAAAGCAGTAAATTGAAACCGAATAAGAACTGTAACCTGTCTACATGGAATCCTGGATGTGAACCTGGGTGGGCTTGTGGAACTACTGAGGAAGTTGACGTGAAAAATAAAACATATGTGCCTGCCAGAACTGAAGACTGTGCACCTTGTTGTGAGGGTTTTTTCTGCCCTCATGGTCTTACTTGCATGATCCCTTGCCCAAAAGGTGCTTACTGCCCACTTGGAAAGCTCAATAGCACTACTGGTATATGTGTGCCATACCGTTATCACCTACCTCCAGGGAAGCCAAACCACACTTGTGGAGGAGCAGATAGGTGGGCTGATGTCTTGAGTAGTAAAGAGGTATTCTGTTCGGGTGGATCATACTGTCCGTCTAGCATCCAAAAAAATCCTTGCAGTAGTGGACATTATTGCAGGCTGGGCTCCACATCTCAGGAAGGATGTTTCAAAATGGCAAGTTGTAATGCGAAATCAGAAAATCAAAATATTACTGCATATGGTATCATGCTTTTTGCTGCAATAATAGTTATACTTATTATTATATATAACTGTACTGATCAAGTGCTTGCCACCCGAGAGAAAAGACAAGCAAAATCCAGGGAAAAGGCTGTTCAAAGTGTAAGAGAAACAGCACAAGCACGTGAAAAATGGAAATCTGCAAAAGACATTGCTAAGAAGCATGCTGTTGGACTCTCAACACAGTTTTCACGAACATTTTCTCGCAGAAAATCCACCAGGCATTCGGACCAGCTGAAAGGAACAGGACAAGCTAAACCTGGAACAGATGGTGCCTTGCCACCTATGCCACTGACTGCGATAGGTGCATCTGAAGCAGCAACATCTAAAGGAAAGAAAAAGGAAAAAAGCAACCTCACACAAATGTTACATGCTATTGAGAATGACCCAGATAGTAATGAAGGCTTTAATCTAGAGATAGGTGATAAAAATATTAAAAAGAACGCACCAAAAGGTAAGCAGTTGCATACCCAAAGCCAGATTTTCAAGTATGCATATGGTCAAATTGAGAAGGAAAAGGCTTTACAGGAGCAGACAGCAAACTTAACCTTCTCTGGGGTTATACAAATGGCTGGTGGAATTGAAATCCAAAAGAGGCCTCCAATTGAGGTTGCTTTTAAAGATCTAACCCTCACATTGAAAGGGAAAAATATACATCTTATGAGATGTGTGACTGGGAAAATATCACCAGGCCGGGTTTCAGCTGTCATGGGTCCATCTGGAGCAGGAAAAACAACTTTTCTTAATGCTTTGTTAGGAAAAGTGAGAGGGTGCACCATGAGTGGTATGGTTCTTGTAAATGGAAAGATGGAATCTATCAACTCATATAAGAAAATCATAGGCTTTGTTCCACAGGATGATATTGTGCATGGCAATTTGACAGTGGAAGAAAATCTCTGGTTCAGCGCAAGATGCAGACTCTCTTCCAATCTGCCTCAACCAGAAAAGGTCCTGGTTGTTGAAAGAGTTATTGAATCCTTGGGCTTGCAGGCAGTGCGGGATTCCCTGGTTGGAACGGTAGAGAAGCGAGGAATCTCTGGAGGTCAAAGAAAAAGAGTAAATGTTGGGCTGGAAATGGTCATGGAACCATCACTTCTAATTTTAGATGAACCCACATCTGGTTTGGATAGTTCATCTTCTAATCTGCTACTTAGAGCTCTTAGACGTGAGGCTCTTGAAGGAGTTAACATTTGCATGGTTGTCCACCAGCCCAGCTACACCTTGTTCAGGATGTTTGATGATTTGATACTTCTCGCTAAAGGTGGGCTTACAGTGTATCATGGATCAGTGAAGAAAGTTGAAGAGTACTTCAAGAGCCTTGGGATTATTGTTCCTGATCGTGTCAATCCTCCAGACTATTTCATTGACATTTTGGAAGGCTTAGTAAAACCAAGCACAAGCTCAGGGGTGGACTATAAACAACTACCCGTTAGGTGGATGCTTCATAATGGGTACCCAGTTCCTATGGATATGCTTCAGACTTCTGAGGGAATGGCTGCATCAACAAGTGACAGTTCAGCTCATGATTCTGGATCGGAGGGTTTTTGGCAGGATGTCAAGTGTAATGTTGAGGTGAAAAAGGACAATATACAGCATAATCTCTTAAAGTCGAGTGACTTATCGGAGCGGATTACCCCTGGCATGTTCCTGCAATATAGATACTTCCTTGGCAGGGTTGGTAAGCAGCGATTACGAGAATCGAGGACACAAGCAATAGATTTTCTTATTTTATTGCTTGCTGGATCATGCTTAGGAGTTCTTGCTAAAGTAAGCGAGGAGACCTTCGGTTATCATGGTTATATGTACACCGTCATAGCAGTTTCTCTCCTTGGCAAGATTGCAGCTTTGAGAACGTTTGGACTGGACAAGTTGCACTACTGGAGACAGAGCTCTGCTGGCATGAGTAGCTTGGCTTACTTTCTTTCAAAAGATACAGTGGACCATTTTAATACGGTCATCAAGCCTCTCGTTTACCTCTCCATGTTCTATTTCTTCAACAATCCAAGATCATCTGTCACAGATAATTATGTCGTTTTGTTATGTTTGGTTTACTGCGTAACTGGTATAGCTTATGCCTTGTCCATATACCTGGCTCCCGGTCCAGCTCAACTGTGGTCCGTGCTTCTCCCAGTCGTTTTGACTCTAGTAGGAAACAATACTATTGAAAGCCATATTGTGGAAAAAATATCTAACTTCTGCTATACTAAGTGGGCTTTGGAATCTTTTCTCGTAGCAAATGCTCAAAAGTACTCTGGGGTGTGGATAATAACAAGATGTGCTACACTTCAGAAGAGTCACTATGACCTCAAGAATTGGTACCCTAATTTAGCCATGCTCATTACTCTGGGTGTATTAACAAGAGTCATTGCATACATTATTTTGGTCTTCAAAAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

1124

Amino Acids

123.19

Weight (kDa)

8.98

Isoelectric Point (pI)

41.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	550 - 699	1.2e-23	ABC transporter
ABC2_membrane_7	PF19055	728 - 1122	2e-209	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003083)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60740
fragaria_vesca	FvH4_3g31510 FvH4_3g31510 FvH4_3g31510 FvH4_3g31510 FvH4_3g31510 FvH4_3g31510 FvH4_3g31510 FvH4_3g31510 FvH4_3g31510
malus_domestica	MD03G1123900.v1.1 MD11G1140900.v1.1
prunus_persica	Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1
pyrus_communis	pycom11g11690
rosa_chinensis	RchiOBHm_Chr5g0058181
rosa_laevigata	RLG00000035201
rosa_multiflora	Rmu_co8117600.1_g000001 Rmu_sc0000367.1_g000039
rosa_roxburghii	Rroxscaffold_1G00022350 Rroxscaffold_1G00072570
rosa_rugosa	Rorug04G0431300 Rorug05G0312500 Rorug05G0312600
rosa_samantha	Rh5AG033200 Rh5AG380400 Rh5BG391600 Rh5CG035900 Rh5CG415600 Rh5DG028700
rosa_wichuraiana	Rw5G035820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	105
Acc65I	GGTACC	2 cut(s)	2430, 3294
AccB1I	GGYRCC	4 cut(s)	79, 1250, 2430, 3294
AccB7I	CCANNNNNTGG	1 cut(s)	3154
AccBSI	CCGCTC	1 cut(s)	2605
AccI	GTMKAC	2 cut(s)	303, 503
AccII	CGCG	1 cut(s)	85
AciI	CCGC	9 cut(s)	83, 108, 111, 120, 132, 138, 406, 1975, 2605
AclI	AACGTT	1 cut(s)	2831
AclWI	GGATC	5 cut(s)	646, 829, 2269, 2518, 2728
AcuI	CTGAAG	4 cut(s)	615, 1311, 2438, 3248
AcvI	CACGTG	1 cut(s)	1103
AcyI	GRCGYC	2 cut(s)	80, 102
AfaI	GTAC	7 cut(s)	453, 1015, 2285, 2432, 2783, 3227, 3296
AfiI	CCNNNNNNNGG	6 cut(s)	1533, 2096, 2205, 2412, 2650, 3154
AjiI	CACGTC	2 cut(s)	562, 2144
AleI	CACNNNNGTG	1 cut(s)	759
Alw21I	GWGCWC	7 cut(s)	18, 54, 416, 607, 1754, 2137, 2870
Alw26I	GTCTC	4 cut(s)	174, 193, 2750, 2854
Alw44I	GTGCAC	3 cut(s)	412, 603, 1750
AlwI	GGATC	5 cut(s)	646, 829, 2269, 2518, 2728
AlwNI	CAGNNNCTG	1 cut(s)	288
Ama87I	CYCGRG	1 cut(s)	1035
AoxI	GGCC	3 cut(s)	71, 1574, 1669
ApaLI	GTGCAC	3 cut(s)	412, 603, 1750
ApeKI	GCWGC	6 cut(s)	403, 977, 1295, 2474, 2662, 2819
Asp700I	GAANNNNTTC	2 cut(s)	1177, 3201
Asp718I	GGTACC	2 cut(s)	2430, 3294
AspLEI	GCGC	3 cut(s)	82, 365, 1886
AspS9I	GGNCC	7 cut(s)	72, 1207, 1691, 1927, 2917, 3077, 3093
AsuC2I	CCSGG	4 cut(s)	77, 196, 1673, 3075
AsuHPI	GGTGA	7 cut(s)	202, 238, 452, 722, 1412, 1656, 2563
AvaI	CYCGRG	1 cut(s)	1035
AvaII	GGWCC	6 cut(s)	1207, 1691, 1927, 2917, 3077, 3093
BaeGI	GKGCMC	3 cut(s)	416, 607, 1754
BanI	GGYRCC	4 cut(s)	79, 1250, 2430, 3294
BanII	GRGCYC	3 cut(s)	887, 2137, 2870
BarI	GAAGNNNNNNTAC	2 cut(s)	191, 223
BbrPI	CACGTG	1 cut(s)	1103
BbsI	GAAGAC	2 cut(s)	603, 3355
Bbv12I	GWGCWC	7 cut(s)	18, 54, 416, 607, 1754, 2137, 2870
BbvI	GCAGC	6 cut(s)	415, 964, 1307, 2461, 2674, 2831
BccI	CCATC	6 cut(s)	110, 140, 1241, 1702, 1780, 2074
BclI	TGATCA	1 cut(s)	1018
BcnI	CCSGG	4 cut(s)	77, 196, 1673, 3075
BcoDI	GTCTC	4 cut(s)	174, 193, 2750, 2854
BfaI	CTAG	3 cut(s)	837, 1391, 3122
BfoI	RGCGCY	1 cut(s)	83
BglII	AGATCT	1 cut(s)	1600
BisI	GCNGC	9 cut(s)	83, 109, 112, 404, 978, 1296, 2475, 2663, 2820
BlsI	GCNGC	9 cut(s)	84, 110, 113, 405, 979, 1297, 2476, 2664, 2821
BmcAI	AGTACT	2 cut(s)	2285, 3227
Bme18I	GGWCC	6 cut(s)	1207, 1691, 1927, 2917, 3077, 3093
BmeT110I	CYCGRG	1 cut(s)	1035
BmgBI	CACGTC	2 cut(s)	562, 2144
BmgT120I	GGNCC	7 cut(s)	72, 1207, 1691, 1927, 2917, 3077, 3093
BmiI	GGNNCC	9 cut(s)	74, 81, 886, 1252, 1692, 2064, 2432, 3072, 3296
BmrI	ACTGGG	3 cut(s)	1662, 2429, 3101
BmsI	GCATC	5 cut(s)	849, 1295, 1880, 2406, 2486
BmuI	ACTGGG	3 cut(s)	1662, 2429, 3101
BpiI	GAAGAC	2 cut(s)	603, 3355
BplI	GAGNNNNNCTC	1 cut(s)	35
BpmI	CTGGAG	5 cut(s)	723, 1719, 2037, 2313, 2878
Bpu10I	CCTNAGC	2 cut(s)	2380, 2728
BpuEI	CTTGAG	4 cut(s)	247, 254, 811, 3269
BpuMI	CCSGG	4 cut(s)	77, 196, 1673, 3075
Bsa29I	ATCGAT	1 cut(s)	431
BsaAI	YACGTR	1 cut(s)	1103
BsaHI	GRCGYC	2 cut(s)	80, 102
BsaI	GGTCTC	1 cut(s)	2750
BsaXI	ACNNNNNCTCC	2 cut(s)	171, 201
Bsc4I	CCNNNNNNNGG	6 cut(s)	1533, 2096, 2205, 2412, 2650, 3154
Bse1I	ACTGG	7 cut(s)	709, 1657, 2435, 2844, 2861, 3043, 3107
Bse3DI	GCAATG	2 cut(s)	1128, 3342
BseCI	ATCGAT	1 cut(s)	431
BseGI	GGATG	7 cut(s)	524, 840, 908, 1840, 2214, 2421, 2536
BseLI	CCNNNNNNNGG	6 cut(s)	1533, 2096, 2205, 2412, 2650, 3154
BseMI	GCAATG	2 cut(s)	1128, 3342
BseMII	CTCAG	6 cut(s)	73, 348, 540, 908, 2394, 2454
BseNI	ACTGG	7 cut(s)	709, 1657, 2435, 2844, 2861, 3043, 3107
BseRI	GAGGAG	4 cut(s)	189, 192, 780, 2768
BseSI	GKGCMC	3 cut(s)	416, 607, 1754
BseXI	GCAGC	6 cut(s)	415, 964, 1307, 2461, 2674, 2831
BseYI	CCCAGC	2 cut(s)	880, 2189
Bsh1236I	CGCG	1 cut(s)	85
BshFI	GGCC	3 cut(s)	73, 1576, 1671
BshNI	GGYRCC	4 cut(s)	79, 1250, 2430, 3294
BshVI	ATCGAT	1 cut(s)	431
BsiHKAI	GWGCWC	7 cut(s)	18, 54, 416, 607, 1754, 2137, 2870
BsiHKCI	CYCGRG	1 cut(s)	1035
BsiSI	CCGG	4 cut(s)	77, 195, 1672, 3075
BslI	CCNNNNNNNGG	6 cut(s)	1533, 2096, 2205, 2412, 2650, 3154
BsmAI	GTCTC	4 cut(s)	174, 193, 2750, 2854
BsmBI	CGTCTC	1 cut(s)	174
BsmI	GAATGC	1 cut(s)	1201
BsnI	GGCC	3 cut(s)	73, 1576, 1671
Bso31I	GGTCTC	1 cut(s)	2750
BsoBI	CYCGRG	1 cut(s)	1035
Bsp1286I	GDGCHC	8 cut(s)	18, 54, 416, 607, 887, 1754, 2137, 2870
Bsp1407I	TGTACA	1 cut(s)	2781
Bsp143I	GATC	9 cut(s)	651, 821, 1018, 1600, 2261, 2314, 2510, 2720, 2984
BspACI	CCGC	9 cut(s)	83, 108, 111, 120, 132, 138, 406, 1975, 2605
BspANI	GGCC	3 cut(s)	73, 1576, 1671
BspCNI	CTCAG	6 cut(s)	72, 347, 541, 907, 2393, 2455
BspDI	ATCGAT	1 cut(s)	431
BspFNI	CGCG	1 cut(s)	85
BspHI	TCATGA	1 cut(s)	2500
BspLI	GGNNCC	9 cut(s)	74, 81, 886, 1252, 1692, 2064, 2432, 3072, 3296
BspPI	GGATC	5 cut(s)	646, 829, 2269, 2518, 2728
BspT107I	GGYRCC	4 cut(s)	79, 1250, 2430, 3294
BspTNI	GGTCTC	1 cut(s)	2750
BsrBI	CCGCTC	1 cut(s)	2605
BsrDI	GCAATG	2 cut(s)	1128, 3342
BsrGI	TGTACA	1 cut(s)	2781
BsrI	ACTGG	7 cut(s)	709, 1657, 2435, 2844, 2861, 3043, 3107
BssMI	GATC	9 cut(s)	651, 821, 1018, 1600, 2261, 2314, 2510, 2720, 2984
BssNI	GRCGYC	2 cut(s)	80, 102
BssT1I	CCWWGG	4 cut(s)	1956, 2296, 2644, 2806
Bst6I	CTCTTC	3 cut(s)	1906, 2274, 3263
BstACI	GRCGYC	2 cut(s)	80, 102
BstAPI	GCANNNNNTGC	1 cut(s)	1972
BstAUI	TGTACA	1 cut(s)	2781
BstBAI	YACGTR	1 cut(s)	1103
BstC8I	GCNNGC	9 cut(s)	54, 585, 878, 1029, 1143, 1964, 1968, 2715, 2875
BstENI	CCTNNNNNAGG	1 cut(s)	2203
BstF5I	GGATG	7 cut(s)	524, 840, 908, 1840, 2214, 2421, 2536
BstFNI	CGCG	1 cut(s)	85
BstH2I	RGCGCY	1 cut(s)	83
BstHHI	GCGC	3 cut(s)	82, 365, 1886
BstKTI	GATC	9 cut(s)	654, 824, 1021, 1603, 2264, 2317, 2513, 2723, 2987
BstMAI	GTCTC	4 cut(s)	174, 193, 2750, 2854
BstMBI	GATC	9 cut(s)	651, 821, 1018, 1600, 2261, 2314, 2510, 2720, 2984
BstNSI	RCATGY	3 cut(s)	1145, 1352, 2623
BstSLI	GKGCMC	3 cut(s)	416, 607, 1754
BstUI	CGCG	1 cut(s)	85
BstV1I	GCAGC	6 cut(s)	415, 964, 1307, 2461, 2674, 2831
BstV2I	GAAGAC	2 cut(s)	603, 3355
BstX2I	RGATCY	1 cut(s)	1600
BstXI	CCANNNNNNTGG	2 cut(s)	761, 3067
BstYI	RGATCY	1 cut(s)	1600
Bsu15I	ATCGAT	1 cut(s)	431
BsuRI	GGCC	3 cut(s)	73, 1576, 1671
BsuTUI	ATCGAT	1 cut(s)	431
BtgZI	GCGATG	3 cut(s)	129, 159, 165
BtrI	CACGTC	2 cut(s)	562, 2144
BtsCI	GGATG	7 cut(s)	524, 840, 908, 1840, 2214, 2421, 2536
BtsI	GCAGTG	1 cut(s)	1977
BtsIMutI	CAGTG	6 cut(s)	1268, 1866, 1977, 2256, 2271, 2919
Cac8I	GCNNGC	9 cut(s)	54, 585, 878, 1029, 1143, 1964, 1968, 2715, 2875
CaiI	CAGNNNCTG	1 cut(s)	288
CciI	TCATGA	1 cut(s)	2500
CfoI	GCGC	3 cut(s)	82, 365, 1886
Cfr13I	GGNCC	7 cut(s)	72, 1207, 1691, 1927, 2917, 3077, 3093
ClaI	ATCGAT	1 cut(s)	431
CseI	GACGC	1 cut(s)	280
Csp6I	GTAC	7 cut(s)	452, 1014, 2284, 2431, 2782, 3226, 3295
CviQI	GTAC	7 cut(s)	452, 1014, 2284, 2431, 2782, 3226, 3295
DinI	GGCGCC	1 cut(s)	81
DpnI	GATC	9 cut(s)	653, 823, 1020, 1602, 2263, 2316, 2512, 2722, 2986
DpnII	GATC	9 cut(s)	651, 821, 1018, 1600, 2261, 2314, 2510, 2720, 2984
DraI	TTTAAA	2 cut(s)	421, 1597
Eam1104I	CTCTTC	3 cut(s)	1906, 2274, 3263
EarI	CTCTTC	3 cut(s)	1906, 2274, 3263
EciI	GGCGGA	2 cut(s)	147, 153
Ecl136II	GAGCTC	2 cut(s)	2135, 2868
Eco130I	CCWWGG	4 cut(s)	1956, 2296, 2644, 2806
Eco147I	AGGCCT	1 cut(s)	1576
Eco24I	GRGCYC	3 cut(s)	887, 2137, 2870
Eco31I	GGTCTC	1 cut(s)	2750
Eco47I	GGWCC	6 cut(s)	1207, 1691, 1927, 2917, 3077, 3093
Eco53kI	GAGCTC	2 cut(s)	2135, 2868
Eco57I	CTGAAG	4 cut(s)	615, 1311, 2438, 3248
Eco72I	CACGTG	1 cut(s)	1103
Eco88I	CYCGRG	1 cut(s)	1035
EcoICRI	GAGCTC	2 cut(s)	2135, 2868
EcoNI	CCTNNNNNAGG	1 cut(s)	2203
EcoO109I	RGGNCCY	1 cut(s)	1927
EcoT14I	CCWWGG	4 cut(s)	1956, 2296, 2644, 2806
EcoT22I	ATGCAT	1 cut(s)	1474
EcoT38I	GRGCYC	3 cut(s)	887, 2137, 2870
EgeI	GGCGCC	1 cut(s)	81
EheI	GGCGCC	1 cut(s)	81
ErhI	CCWWGG	4 cut(s)	1956, 2296, 2644, 2806
Esp3I	CGTCTC	1 cut(s)	174
FalI	AAGNNNNNCTT	2 cut(s)	2229, 2261
FauI	CCCGC	1 cut(s)	1968
FauNDI	CATATG	3 cut(s)	577, 958, 1474
FbaI	TGATCA	1 cut(s)	1018
FblI	GTMKAC	2 cut(s)	303, 503
Fnu4HI	GCNGC	9 cut(s)	83, 109, 112, 404, 978, 1296, 2475, 2663, 2820
FokI	GGATG	7 cut(s)	531, 827, 915, 1847, 2221, 2428, 2543
FriOI	GRGCYC	3 cut(s)	887, 2137, 2870
Fsp4HI	GCNGC	9 cut(s)	83, 109, 112, 404, 978, 1296, 2475, 2663, 2820
FspBI	CTAG	3 cut(s)	837, 1391, 3122
GlaI	GCGC	3 cut(s)	81, 364, 1885
GluI	GCNGC	9 cut(s)	83, 109, 112, 404, 978, 1296, 2475, 2663, 2820
GsaI	CCCAGC	2 cut(s)	884, 2193
GsuI	CTGGAG	5 cut(s)	723, 1719, 2037, 2313, 2878
HaeII	RGCGCY	1 cut(s)	83
HaeIII	GGCC	3 cut(s)	73, 1576, 1671
HapII	CCGG	4 cut(s)	77, 195, 1672, 3075
HgaI	GACGC	1 cut(s)	280
HhaI	GCGC	3 cut(s)	82, 365, 1886
Hin1I	GRCGYC	2 cut(s)	80, 102
Hin6I	GCGC	3 cut(s)	80, 363, 1884
HinP1I	GCGC	3 cut(s)	80, 363, 1884
HincII	GTYRAC	2 cut(s)	559, 2164
HindII	GTYRAC	2 cut(s)	559, 2164
HpaI	GTTAAC	1 cut(s)	2164
HpaII	CCGG	4 cut(s)	77, 195, 1672, 3075
HphI	GGTGA	7 cut(s)	202, 238, 452, 722, 1412, 1656, 2563
Hpy188I	TCNGA	9 cut(s)	337, 937, 1207, 1291, 2457, 2464, 2515, 2602, 3267
Hpy99I	CGWCG	1 cut(s)	107
HpyAV	CCTTC	7 cut(s)	893, 1373, 1483, 1537, 2150, 2348, 2770
HpyCH4IV	ACGT	6 cut(s)	102, 300, 561, 1102, 2143, 2831
HpySE526I	ACGT	6 cut(s)	102, 300, 561, 1102, 2143, 2831
Hsp92I	GRCGYC	2 cut(s)	80, 102
HspAI	GCGC	3 cut(s)	80, 363, 1884
KasI	GGCGCC	1 cut(s)	79
KpnI	GGTACC	2 cut(s)	2434, 3298
Ksp22I	TGATCA	1 cut(s)	1018
KspAI	GTTAAC	1 cut(s)	2164
Kzo9I	GATC	9 cut(s)	651, 821, 1018, 1600, 2261, 2314, 2510, 2720, 2984
LmnI	GCTCC	6 cut(s)	767, 890, 1507, 1700, 2602, 3076
Lsp1109I	GCAGC	6 cut(s)	415, 964, 1307, 2461, 2674, 2831
LweI	GCATC	5 cut(s)	849, 1295, 1880, 2406, 2486
MaeI	CTAG	3 cut(s)	837, 1391, 3122
MaeII	ACGT	6 cut(s)	102, 300, 561, 1102, 2143, 2831
MaeIII	GTNAC	9 cut(s)	244, 494, 1344, 1648, 2486, 2591, 2992, 3034, 3272
MalI	GATC	9 cut(s)	653, 823, 1020, 1602, 2263, 2316, 2512, 2722, 2986
MbiI	CCGCTC	1 cut(s)	2605
MboI	GATC	9 cut(s)	651, 821, 1018, 1600, 2261, 2314, 2510, 2720, 2984
MfeI	CAATTG	1 cut(s)	1581
MflI	RGATCY	1 cut(s)	1600
MhlI	GDGCHC	8 cut(s)	18, 54, 416, 607, 887, 1754, 2137, 2870
Mly113I	GGCGCC	1 cut(s)	80
MlyI	GAGTC	7 cut(s)	195, 238, 1146, 1890, 3112, 3280, 3348
MmeI	TCCRAC	2 cut(s)	1129, 1969
Mph1103I	ATGCAT	1 cut(s)	1474
MroXI	GAANNNNTTC	2 cut(s)	1177, 3201
MslI	CAYNNNNRTG	3 cut(s)	759, 1340, 2171
MspA1I	CMGCKG	3 cut(s)	406, 1213, 1682
MspI	CCGG	4 cut(s)	77, 195, 1672, 3075
MunI	CAATTG	1 cut(s)	1581
Mva1269I	GAATGC	1 cut(s)	1201
MvnI	CGCG	1 cut(s)	85
NarI	GGCGCC	1 cut(s)	80
NciI	CCSGG	4 cut(s)	77, 196, 1673, 3075
NdeI	CATATG	3 cut(s)	577, 958, 1474
NdeII	GATC	9 cut(s)	651, 821, 1018, 1600, 2261, 2314, 2510, 2720, 2984
NlaIV	GGNNCC	9 cut(s)	74, 81, 886, 1252, 1692, 2064, 2432, 3072, 3296
NmuCI	GTSAC	6 cut(s)	244, 1648, 2486, 2591, 2992, 3272
NsiI	ATGCAT	1 cut(s)	1474
NspI	RCATGY	3 cut(s)	1145, 1352, 2623
OliI	CACNNNNGTG	1 cut(s)	759
PaeI	GCATGC	1 cut(s)	1145
PagI	TCATGA	1 cut(s)	2500
PceI	AGGCCT	1 cut(s)	1576
PcsI	WCGNNNNNNNCGW	1 cut(s)	111
PctI	GAATGC	1 cut(s)	1201
PdmI	GAANNNNTTC	2 cut(s)	1177, 3201
PfeI	GAWTC	9 cut(s)	275, 511, 1790, 1952, 1979, 2010, 2504, 2675, 3197
PflFI	GACNNNGTC	1 cut(s)	185
PflMI	CCANNNNNTGG	1 cut(s)	3154
PfoI	TCCNGGA	1 cut(s)	514
PkrI	GCNGC	9 cut(s)	84, 110, 113, 405, 979, 1297, 2476, 2664, 2821
PleI	GAGTC	7 cut(s)	194, 237, 1146, 1890, 3112, 3279, 3347
PluTI	GGCGCC	1 cut(s)	83
PmaCI	CACGTG	1 cut(s)	1103
PmlI	CACGTG	1 cut(s)	1103
PpsI	GAGTC	7 cut(s)	194, 237, 1146, 1890, 3112, 3279, 3347
Ppu21I	YACGTR	1 cut(s)	1103
PpuMI	RGGWCCY	1 cut(s)	1927
Psp124BI	GAGCTC	2 cut(s)	2137, 2870
Psp1406I	AACGTT	1 cut(s)	2831
Psp5II	RGGWCCY	1 cut(s)	1927
PspCI	CACGTG	1 cut(s)	1103
PspFI	CCCAGC	2 cut(s)	880, 2189
PspN4I	GGNNCC	9 cut(s)	74, 81, 886, 1252, 1692, 2064, 2432, 3072, 3296
PspPI	GGNCC	7 cut(s)	72, 1207, 1691, 1927, 2917, 3077, 3093
PspPPI	RGGWCCY	1 cut(s)	1927
PstNI	CAGNNNCTG	1 cut(s)	288
PsuI	RGATCY	1 cut(s)	1600
PsyI	GACNNNGTC	1 cut(s)	185
PvuII	CAGCTG	2 cut(s)	1213, 1682
RsaI	GTAC	7 cut(s)	453, 1015, 2285, 2432, 2783, 3227, 3296
RsaNI	GTAC	7 cut(s)	452, 1014, 2284, 2431, 2782, 3226, 3295
RseI	CAYNNNNRTG	3 cut(s)	759, 1340, 2171
SacI	GAGCTC	2 cut(s)	2137, 2870
SatI	GCNGC	9 cut(s)	83, 109, 112, 404, 978, 1296, 2475, 2663, 2820
Sau3AI	GATC	9 cut(s)	651, 821, 1018, 1600, 2261, 2314, 2510, 2720, 2984
Sau96I	GGNCC	7 cut(s)	72, 1207, 1691, 1927, 2917, 3077, 3093
ScaI	AGTACT	2 cut(s)	2285, 3227
SchI	GAGTC	7 cut(s)	195, 238, 1146, 1890, 3112, 3280, 3348
SduI	GDGCHC	8 cut(s)	18, 54, 416, 607, 887, 1754, 2137, 2870
SfaNI	GCATC	5 cut(s)	849, 1295, 1880, 2406, 2486
SfoI	GGCGCC	1 cut(s)	81
SinI	GGWCC	6 cut(s)	1207, 1691, 1927, 2917, 3077, 3093
SmiMI	CAYNNNNRTG	3 cut(s)	759, 1340, 2171
SmlI	CTYRAG	4 cut(s)	226, 269, 790, 3284
SmoI	CTYRAG	4 cut(s)	226, 269, 790, 3284
SphI	GCATGC	1 cut(s)	1145
SseBI	AGGCCT	1 cut(s)	1576
SsiI	CCGC	9 cut(s)	83, 108, 111, 120, 132, 138, 406, 1975, 2605
SspDI	GGCGCC	1 cut(s)	79
SspI	AATATT	2 cut(s)	949, 1411
SspMI	CTAG	3 cut(s)	837, 1391, 3122
SstI	GAGCTC	2 cut(s)	2137, 2870
StuI	AGGCCT	1 cut(s)	1576
StyI	CCWWGG	4 cut(s)	1956, 2296, 2644, 2806
TaiI	ACGT	6 cut(s)	105, 303, 564, 1105, 2146, 2834
TaqI	TCGA	4 cut(s)	156, 431, 2588, 2678
TatI	WGTACW	5 cut(s)	451, 1013, 2283, 2781, 3225
TauI	GCSGC	3 cut(s)	85, 111, 114
TfiI	GAWTC	9 cut(s)	275, 511, 1790, 1952, 1979, 2010, 2504, 2675, 3197
TscAI	CASTG	6 cut(s)	1275, 1866, 1977, 2256, 2271, 2919
TseFI	GTSAC	6 cut(s)	244, 1648, 2486, 2591, 2992, 3272
TseI	GCWGC	6 cut(s)	403, 977, 1295, 2474, 2662, 2819
Tsp45I	GTSAC	6 cut(s)	244, 1648, 2486, 2591, 2992, 3272
TspDTI	ATGAA	8 cut(s)	279, 340, 389, 1392, 2100, 2100, 2329, 2411
TspGWI	ACGGA	3 cut(s)	198, 822, 3085
TspRI	CASTG	6 cut(s)	1275, 1866, 1977, 2256, 2271, 2919
Tth111I	GACNNNGTC	1 cut(s)	185
Van91I	CCANNNNNTGG	1 cut(s)	3154
VneI	GTGCAC	3 cut(s)	412, 603, 1750
VpaK11BI	GGWCC	6 cut(s)	1207, 1691, 1927, 2917, 3077, 3093
XagI	CCTNNNNNAGG	1 cut(s)	2203
XbaI	TCTAGA	1 cut(s)	1390
XceI	RCATGY	3 cut(s)	1145, 1352, 2623
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1762, 2098, 3087
XmiI	GTMKAC	2 cut(s)	303, 503
XmnI	GAANNNNTTC	2 cut(s)	1177, 3201
XspI	CTAG	3 cut(s)	837, 1391, 3122
ZraI	GACGTC	1 cut(s)	103
ZrmI	AGTACT	2 cut(s)	2285, 3227
Zsp2I	ATGCAT	1 cut(s)	1474

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.