Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0003083

Physical Location & Seq

Genomic Coordinates Forward (+)

56400985 .. 56412713

Gene Structure 11729 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG415600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2505 bp

ATGGTAATAACCATTATTGTTGAACTTGCAGGATGTTTCAAAATGGCAAGTTGTAATGCGAAATCAGAAAATCAAAATATTACTGCATATGGTATCATGCTTTTTGCTGCAATAATAGTTATACTTATTATTATATATAACTGTACTGATCAAGTGCTTGCCACCCGAGAGAAAAGACAAGCAAAATCCAGGGAAAAGGCTGTTCAAAGTGTAAGAGAAACAGCACAAGCACGTGAAAAATGGAAATCTGCAAAAGACATTGCTAAGAAGCATGCTGTTGGACTCTCAACACAGTTTTCACGAACATTTTCTCGCAGAAAATCCACCAGGCATTCGGACCAGCTGAAAGGAACAGGACAAGCTAAACCTGGAACAGATGGTGCCTTGCCACCTATGCCACTGACTGCGATAGGTGCATCTGAAGCAGCAACATCTAAAGGAAAGAAAAAGGAAAAAAGCAACCTCACACAAATGTTACATGCTATTGAGAATGACCCAGATAGTAATGAAGGCTTTAATCTAGAGATAGGTGATAAAAATATTAAAAAGAACGCACCAAAAGGTAAGCAGTTGCATACCCAAAGCCAGATTTTCAAGTATGCATATGGTCAAATTGAGAAGGAAAAGGCTTTACAGGAGCAGACAGCAAACTTAACCTTCTCTGGGGTTATACAAATGGCTGGTGGAATTGAAATCCAAAAGAGGCCTCCAATTGAGGTTGCTTTTAAAGATCTAACCCTCACATTGAAAGGGAAAAATATACATCTTATGAGATGTGTGACTGGGAAAATATCACCAGGCCGGGTTTCAGCTGTCATGGGTCCATCTGGAGCAGGAAAAACAACTTTTCTTAATGCTTTGTTAGGAAAAGTGAGAGGGTGCACCATGAGTGGTATGGTTCTTGTAAATGGAAAGATGGAATCTATCAACTCATATAAGAAAATCATAGGCTTTGTTCCACAGGATGATATTGTGCATGGCAATTTGACAGTGGAAGAAAATCTCTGGTTCAGCGCAAGATGCAGACTCTCTTCCAATCTGCCTCAACCAGAAAAGGTCCTGGTTGTTGAAAGAGTTATTGAATCCTTGGGCTTGCAGGCAGTGCGGGATTCCCTGGTTGGAACGGTAGAGAAGCGAGGAATCTCTGGAGGTCAAAGAAAAAGAGTAAATGTTGGGCTGGAAATGGTCATGGAACCATCACTTCTAATTTTAGATGAACCCACATCTGGTTTGGATAGTTCATCTTCTAATCTGCTACTTAGAGCTCTTAGACGTGAGGCTCTTGAAGGAGTTAACATTTGCATGGTTGTCCACCAGCCCAGCTACACCTTGTTCAGGATGTTTGATGATTTGATACTTCTCGCTAAAGGTGGGCTTACAGTGTATCATGGATCAGTGAAGAAAGTTGAAGAGTACTTCAAGAGCCTTGGGATTATTGTTCCTGATCGTGTCAATCCTCCAGACTATTTCATTGACATTTTGGAAGGCTTAGTAAAACCAAGCACAAGCTCAGGGGTGGACTATAAACAACTACCCGTTAGGTGGATGCTTCATAATGGGTACCCAGTTCCTATGGATATGCTTCAGACTTCTGAGGGAATGGCTGCATCAACAAGTGACAGTTCAGCTCATGATTCTGGATCGGAGGGTTTTTGGCAGGATGTCAAGTGTAATGTTGAGGTGAAAAAGGACAATATACAGCATAATCTCTTAAAGTCGAGTGACTTATCGGAGCGGATTACCCCTGGCATGTTCCTGCAATATAGATACTTCCTTGGCAGGGTTGGTAAGCAGCGATTACGAGAATCGAGGACACAAGCAATAGATTTTCTTATTTTATTGCTTGCTGGATCATGCTTAGGAGTTCTTGCTAAAGTAAGCGAGGAGACCTTCGGTTATCATGGTTATATGTACACCGTCATAGCAGTTTCTCTCCTTGGCAAGATTGCAGCTTTGAGAACGTTTGGACTGGACAAGTTGCACTACTGGAGACAGAGCTCTGCTGGCATGAGTAGCTTGGCTTACTTTCTTTCAAAAGATACAGTGGACCATTTTAATACGGTCATCAAGCCTCTCGTTTACCTCTCCATGTTCTATTTCTTCAACAATCCAAGATCATCTGTCACAGATAATTATGTCGTTTTGTTATGTTTGGTTTACTGCGTAACTGGTATAGCTTATGCCTTGTCCATATACCTGGCTCCCGGTCCAGCTCAACTGTGGTCCGTGCTTCTCCCAGTCGTTTTGACTCTAGTAGGAAACAATACTATTGAAAGCCATATTGTGGAAAAAATATCTAACTTCTGCTATACTAAGTGGGCTTTGGAATCTTTTCTCGTAGCAAATGCTCAAAAGTTTGTGATCCCCATCCTTATTTATATGCAATCACTGCCTGCCATTTTTTGCCATATGGATATTATAGTGGTTCTTGCTTTCTTGTATTTTCAGGTACTCTGGGGTGTGGATAATAACAAGATGTGCTACACTTCAGAAGAGTCACTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

834

Amino Acids

92.4

Weight (kDa)

9.12

Isoelectric Point (pI)

45.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	260 - 409	8e-24	ABC transporter
ABC2_membrane_7	PF19055	438 - 787	2e-188	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003083)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60740
fragaria_vesca	FvH4_3g31510 FvH4_3g31510 FvH4_3g31510 FvH4_3g31510 FvH4_3g31510 FvH4_3g31510 FvH4_3g31510 FvH4_3g31510 FvH4_3g31510
malus_domestica	MD03G1123900.v1.1 MD11G1140900.v1.1
prunus_persica	Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1
pyrus_communis	pycom11g11690
rosa_chinensis	RchiOBHm_Chr5g0058181
rosa_laevigata	RLG00000035201
rosa_multiflora	Rmu_co8117600.1_g000001 Rmu_sc0000367.1_g000039
rosa_roxburghii	Rroxscaffold_1G00022350 Rroxscaffold_1G00072570
rosa_rugosa	Rorug04G0431300 Rorug05G0312500 Rorug05G0312600
rosa_samantha	Rh5AG033200 Rh5AG380400 Rh5BG391600 Rh5CG035900 Rh5CG415600 Rh5DG028700
rosa_wichuraiana	Rw5G035820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1560
AccB1I	GGYRCC	2 cut(s)	380, 1560
AccB7I	CCANNNNNTGG	1 cut(s)	2284
AccBSI	CCGCTC	1 cut(s)	1735
AciI	CCGC	2 cut(s)	1105, 1735
AclI	AACGTT	1 cut(s)	1961
AclWI	GGATC	4 cut(s)	1399, 1648, 1858, 2356
AcuI	CTGAAG	3 cut(s)	441, 1568, 2472
AcvI	CACGTG	1 cut(s)	233
AfaI	GTAC	5 cut(s)	145, 1415, 1562, 1913, 2451
AfiI	CCNNNNNNNGG	6 cut(s)	663, 1226, 1335, 1542, 1780, 2284
AjiI	CACGTC	1 cut(s)	1274
AjnI	CCWGG	8 cut(s)	188, 326, 367, 796, 1059, 1113, 1744, 2196
Alw21I	GWGCWC	3 cut(s)	884, 1267, 2000
Alw26I	GTCTC	2 cut(s)	1880, 1984
Alw44I	GTGCAC	1 cut(s)	880
AlwI	GGATC	4 cut(s)	1399, 1648, 1858, 2356
Ama87I	CYCGRG	1 cut(s)	165
AoxI	GGCC	2 cut(s)	704, 799
ApaLI	GTGCAC	1 cut(s)	880
ApeKI	GCWGC	5 cut(s)	107, 425, 1604, 1792, 1949
Asp700I	GAANNNNTTC	2 cut(s)	307, 2331
Asp718I	GGTACC	1 cut(s)	1560
AspLEI	GCGC	1 cut(s)	1016
AspS9I	GGNCC	6 cut(s)	337, 821, 1057, 2047, 2207, 2223
AsuC2I	CCSGG	2 cut(s)	803, 2205
AsuHPI	GGTGA	3 cut(s)	542, 786, 1693
AvaI	CYCGRG	1 cut(s)	165
AvaII	GGWCC	6 cut(s)	337, 821, 1057, 2047, 2207, 2223
BaeGI	GKGCMC	1 cut(s)	884
BanI	GGYRCC	2 cut(s)	380, 1560
BanII	GRGCYC	2 cut(s)	1267, 2000
BbrPI	CACGTG	1 cut(s)	233
Bbv12I	GWGCWC	3 cut(s)	884, 1267, 2000
BbvI	GCAGC	5 cut(s)	94, 437, 1591, 1804, 1961
BccI	CCATC	5 cut(s)	371, 832, 910, 1204, 2375
BciT130I	CCWGG	8 cut(s)	190, 328, 369, 798, 1061, 1115, 1746, 2198
BclI	TGATCA	1 cut(s)	148
BcnI	CCSGG	2 cut(s)	803, 2205
BcoDI	GTCTC	2 cut(s)	1880, 1984
BfaI	CTAG	2 cut(s)	521, 2252
BglII	AGATCT	1 cut(s)	730
BisI	GCNGC	5 cut(s)	108, 426, 1605, 1793, 1950
BlsI	GCNGC	5 cut(s)	109, 427, 1606, 1794, 1951
BmcAI	AGTACT	1 cut(s)	1415
Bme18I	GGWCC	6 cut(s)	337, 821, 1057, 2047, 2207, 2223
BmeT110I	CYCGRG	1 cut(s)	165
BmgBI	CACGTC	1 cut(s)	1274
BmgT120I	GGNCC	6 cut(s)	337, 821, 1057, 2047, 2207, 2223
BmiI	GGNNCC	5 cut(s)	382, 822, 1194, 1562, 2202
BmrI	ACTGGG	3 cut(s)	792, 1559, 2231
BmsI	GCATC	4 cut(s)	425, 1010, 1536, 1616
BmuI	ACTGGG	3 cut(s)	792, 1559, 2231
BpmI	CTGGAG	4 cut(s)	849, 1167, 1443, 2008
Bpu10I	CCTNAGC	2 cut(s)	1510, 1858
BpuMI	CCSGG	2 cut(s)	803, 2205
BsaAI	YACGTR	1 cut(s)	233
BsaBI	GATNNNNATC	1 cut(s)	2366
BsaI	GGTCTC	1 cut(s)	1880
BsaJI	CCNNGG	7 cut(s)	189, 1086, 1113, 1426, 1744, 1774, 1936
Bsc4I	CCNNNNNNNGG	6 cut(s)	663, 1226, 1335, 1542, 1780, 2284
Bse1I	ACTGG	6 cut(s)	787, 1565, 1974, 1991, 2173, 2237
Bse3DI	GCAATG	1 cut(s)	258
Bse8I	GATNNNNATC	1 cut(s)	2366
BseBI	CCWGG	8 cut(s)	190, 328, 369, 798, 1061, 1115, 1746, 2198
BseDI	CCNNGG	7 cut(s)	189, 1086, 1113, 1426, 1744, 1774, 1936
BseGI	GGATG	6 cut(s)	38, 970, 1344, 1551, 1666, 2367
BseJI	GATNNNNATC	1 cut(s)	2366
BseLI	CCNNNNNNNGG	6 cut(s)	663, 1226, 1335, 1542, 1780, 2284
BseMI	GCAATG	1 cut(s)	258
BseMII	CTCAG	2 cut(s)	1524, 1584
BseNI	ACTGG	6 cut(s)	787, 1565, 1974, 1991, 2173, 2237
BseRI	GAGGAG	1 cut(s)	1898
BseSI	GKGCMC	1 cut(s)	884
BseXI	GCAGC	5 cut(s)	94, 437, 1591, 1804, 1961
BseYI	CCCAGC	1 cut(s)	1319
BshFI	GGCC	2 cut(s)	706, 801
BshNI	GGYRCC	2 cut(s)	380, 1560
BsiHKAI	GWGCWC	3 cut(s)	884, 1267, 2000
BsiHKCI	CYCGRG	1 cut(s)	165
BsiSI	CCGG	2 cut(s)	802, 2205
BslI	CCNNNNNNNGG	6 cut(s)	663, 1226, 1335, 1542, 1780, 2284
BsmAI	GTCTC	2 cut(s)	1880, 1984
BsmI	GAATGC	1 cut(s)	331
BsnI	GGCC	2 cut(s)	706, 801
Bso31I	GGTCTC	1 cut(s)	1880
BsoBI	CYCGRG	1 cut(s)	165
Bsp1286I	GDGCHC	3 cut(s)	884, 1267, 2000
Bsp1407I	TGTACA	1 cut(s)	1911
Bsp143I	GATC	8 cut(s)	148, 730, 1391, 1444, 1640, 1850, 2114, 2361
BspACI	CCGC	2 cut(s)	1105, 1735
BspANI	GGCC	2 cut(s)	706, 801
BspCNI	CTCAG	2 cut(s)	1523, 1585
BspHI	TCATGA	1 cut(s)	1630
BspLI	GGNNCC	5 cut(s)	382, 822, 1194, 1562, 2202
BspPI	GGATC	4 cut(s)	1399, 1648, 1858, 2356
BspT107I	GGYRCC	2 cut(s)	380, 1560
BspTNI	GGTCTC	1 cut(s)	1880
BsrBI	CCGCTC	1 cut(s)	1735
BsrDI	GCAATG	1 cut(s)	258
BsrGI	TGTACA	1 cut(s)	1911
BsrI	ACTGG	6 cut(s)	787, 1565, 1974, 1991, 2173, 2237
BssECI	CCNNGG	7 cut(s)	189, 1086, 1113, 1426, 1744, 1774, 1936
BssMI	GATC	8 cut(s)	148, 730, 1391, 1444, 1640, 1850, 2114, 2361
BssT1I	CCWWGG	4 cut(s)	1086, 1426, 1774, 1936
Bst2UI	CCWGG	8 cut(s)	190, 328, 369, 798, 1061, 1115, 1746, 2198
Bst6I	CTCTTC	3 cut(s)	1036, 1404, 2487
BstAPI	GCANNNNNTGC	2 cut(s)	1102, 2389
BstAUI	TGTACA	1 cut(s)	1911
BstBAI	YACGTR	1 cut(s)	233
BstC8I	GCNNGC	7 cut(s)	159, 273, 1094, 1098, 1845, 2005, 2394
BstDEI	CTNAG	8 cut(s)	264, 1259, 1268, 1489, 1510, 1593, 1858, 2313
BstENI	CCTNNNNNAGG	1 cut(s)	1333
BstF5I	GGATG	6 cut(s)	38, 970, 1344, 1551, 1666, 2367
BstHHI	GCGC	1 cut(s)	1016
BstKTI	GATC	8 cut(s)	151, 733, 1394, 1447, 1643, 1853, 2117, 2364
BstMAI	GTCTC	2 cut(s)	1880, 1984
BstMBI	GATC	8 cut(s)	148, 730, 1391, 1444, 1640, 1850, 2114, 2361
BstMWI	GCNNNNNNNGC	8 cut(s)	394, 413, 422, 1020, 1102, 2004, 2013, 2389
BstNI	CCWGG	8 cut(s)	190, 328, 369, 798, 1061, 1115, 1746, 2198
BstNSI	RCATGY	3 cut(s)	275, 482, 1753
BstSLI	GKGCMC	1 cut(s)	884
BstV1I	GCAGC	5 cut(s)	94, 437, 1591, 1804, 1961
BstX2I	RGATCY	1 cut(s)	730
BstXI	CCANNNNNNTGG	1 cut(s)	2197
BstYI	RGATCY	1 cut(s)	730
BsuRI	GGCC	2 cut(s)	706, 801
BtrI	CACGTC	1 cut(s)	1274
BtsCI	GGATG	6 cut(s)	38, 970, 1344, 1551, 1666, 2367
BtsI	GCAGTG	2 cut(s)	1107, 2387
BtsIMutI	CAGTG	7 cut(s)	398, 996, 1107, 1386, 1401, 2049, 2387
Cac8I	GCNNGC	7 cut(s)	159, 273, 1094, 1098, 1845, 2005, 2394
CciI	TCATGA	1 cut(s)	1630
CfoI	GCGC	1 cut(s)	1016
Cfr13I	GGNCC	6 cut(s)	337, 821, 1057, 2047, 2207, 2223
Csp6I	GTAC	5 cut(s)	144, 1414, 1561, 1912, 2450
CviQI	GTAC	5 cut(s)	144, 1414, 1561, 1912, 2450
DdeI	CTNAG	8 cut(s)	264, 1259, 1268, 1489, 1510, 1593, 1858, 2313
DpnI	GATC	8 cut(s)	150, 732, 1393, 1446, 1642, 1852, 2116, 2363
DpnII	GATC	8 cut(s)	148, 730, 1391, 1444, 1640, 1850, 2114, 2361
DraI	TTTAAA	1 cut(s)	727
Eam1104I	CTCTTC	3 cut(s)	1036, 1404, 2487
EarI	CTCTTC	3 cut(s)	1036, 1404, 2487
Ecl136II	GAGCTC	2 cut(s)	1265, 1998
Eco130I	CCWWGG	4 cut(s)	1086, 1426, 1774, 1936
Eco147I	AGGCCT	1 cut(s)	706
Eco24I	GRGCYC	2 cut(s)	1267, 2000
Eco31I	GGTCTC	1 cut(s)	1880
Eco47I	GGWCC	6 cut(s)	337, 821, 1057, 2047, 2207, 2223
Eco53kI	GAGCTC	2 cut(s)	1265, 1998
Eco57I	CTGAAG	3 cut(s)	441, 1568, 2472
Eco72I	CACGTG	1 cut(s)	233
Eco88I	CYCGRG	1 cut(s)	165
EcoICRI	GAGCTC	2 cut(s)	1265, 1998
EcoNI	CCTNNNNNAGG	1 cut(s)	1333
EcoO109I	RGGNCCY	1 cut(s)	1057
EcoRII	CCWGG	8 cut(s)	188, 326, 367, 796, 1059, 1113, 1744, 2196
EcoT14I	CCWWGG	4 cut(s)	1086, 1426, 1774, 1936
EcoT22I	ATGCAT	1 cut(s)	604
EcoT38I	GRGCYC	2 cut(s)	1267, 2000
ErhI	CCWWGG	4 cut(s)	1086, 1426, 1774, 1936
FalI	AAGNNNNNCTT	2 cut(s)	1359, 1391
FauI	CCCGC	1 cut(s)	1098
FauNDI	CATATG	3 cut(s)	88, 604, 2409
FbaI	TGATCA	1 cut(s)	148
Fnu4HI	GCNGC	5 cut(s)	108, 426, 1605, 1793, 1950
FokI	GGATG	6 cut(s)	45, 977, 1351, 1558, 1673, 2354
FriOI	GRGCYC	2 cut(s)	1267, 2000
Fsp4HI	GCNGC	5 cut(s)	108, 426, 1605, 1793, 1950
FspBI	CTAG	2 cut(s)	521, 2252
GlaI	GCGC	1 cut(s)	1015
GluI	GCNGC	5 cut(s)	108, 426, 1605, 1793, 1950
GsaI	CCCAGC	1 cut(s)	1323
GsuI	CTGGAG	4 cut(s)	849, 1167, 1443, 2008
HaeIII	GGCC	2 cut(s)	706, 801
HapII	CCGG	2 cut(s)	802, 2205
HhaI	GCGC	1 cut(s)	1016
Hin6I	GCGC	1 cut(s)	1014
HinP1I	GCGC	1 cut(s)	1014
HincII	GTYRAC	1 cut(s)	1294
HindII	GTYRAC	1 cut(s)	1294
HpaI	GTTAAC	1 cut(s)	1294
HpaII	CCGG	2 cut(s)	802, 2205
HphI	GGTGA	3 cut(s)	542, 786, 1693
Hpy166II	GTNNAC	8 cut(s)	882, 1294, 1312, 1519, 1914, 2047, 2080, 2158
Hpy188I	TCNGA	8 cut(s)	67, 337, 421, 1587, 1594, 1645, 1732, 2491
Hpy8I	GTNNAC	8 cut(s)	882, 1294, 1312, 1519, 1914, 2047, 2080, 2158
HpyAV	CCTTC	6 cut(s)	503, 613, 667, 1280, 1478, 1900
HpyCH4IV	ACGT	3 cut(s)	232, 1273, 1961
HpyF10VI	GCNNNNNNNGC	8 cut(s)	394, 413, 422, 1020, 1102, 2004, 2013, 2389
HpyF3I	CTNAG	8 cut(s)	264, 1259, 1268, 1489, 1510, 1593, 1858, 2313
HpySE526I	ACGT	3 cut(s)	232, 1273, 1961
HspAI	GCGC	1 cut(s)	1014
KpnI	GGTACC	1 cut(s)	1564
Ksp22I	TGATCA	1 cut(s)	148
KspAI	GTTAAC	1 cut(s)	1294
Kzo9I	GATC	8 cut(s)	148, 730, 1391, 1444, 1640, 1850, 2114, 2361
LmnI	GCTCC	4 cut(s)	637, 830, 1732, 2206
Lsp1109I	GCAGC	5 cut(s)	94, 437, 1591, 1804, 1961
LweI	GCATC	4 cut(s)	425, 1010, 1536, 1616
MaeI	CTAG	2 cut(s)	521, 2252
MaeII	ACGT	3 cut(s)	232, 1273, 1961
MaeIII	GTNAC	7 cut(s)	474, 778, 1616, 1721, 2122, 2164, 2496
MalI	GATC	8 cut(s)	150, 732, 1393, 1446, 1642, 1852, 2116, 2363
MbiI	CCGCTC	1 cut(s)	1735
MboI	GATC	8 cut(s)	148, 730, 1391, 1444, 1640, 1850, 2114, 2361
MboII	GAAGA	7 cut(s)	1007, 1023, 1236, 1411, 1421, 2092, 2504
MfeI	CAATTG	1 cut(s)	711
MflI	RGATCY	1 cut(s)	730
MhlI	GDGCHC	3 cut(s)	884, 1267, 2000
MluCI	AATT	6 cut(s)	612, 687, 711, 982, 1206, 2131
MlyI	GAGTC	4 cut(s)	276, 1020, 2242, 2504
MmeI	TCCRAC	2 cut(s)	259, 1099
Mph1103I	ATGCAT	1 cut(s)	604
MroXI	GAANNNNTTC	2 cut(s)	307, 2331
MseI	TTAA	8 cut(s)	516, 543, 653, 726, 852, 1293, 1712, 2055
MslI	CAYNNNNRTG	2 cut(s)	470, 1301
MspA1I	CMGCKG	2 cut(s)	343, 812
MspI	CCGG	2 cut(s)	802, 2205
MunI	CAATTG	1 cut(s)	711
Mva1269I	GAATGC	1 cut(s)	331
MvaI	CCWGG	8 cut(s)	190, 328, 369, 798, 1061, 1115, 1746, 2198
MwoI	GCNNNNNNNGC	8 cut(s)	394, 413, 422, 1020, 1102, 2004, 2013, 2389
NciI	CCSGG	2 cut(s)	803, 2205
NdeI	CATATG	3 cut(s)	88, 604, 2409
NdeII	GATC	8 cut(s)	148, 730, 1391, 1444, 1640, 1850, 2114, 2361
NlaIV	GGNNCC	5 cut(s)	382, 822, 1194, 1562, 2202
NmuCI	GTSAC	5 cut(s)	778, 1616, 1721, 2122, 2496
NsiI	ATGCAT	1 cut(s)	604
NspI	RCATGY	3 cut(s)	275, 482, 1753
PaeI	GCATGC	1 cut(s)	275
PagI	TCATGA	1 cut(s)	1630
PceI	AGGCCT	1 cut(s)	706
PctI	GAATGC	1 cut(s)	331
PdmI	GAANNNNTTC	2 cut(s)	307, 2331
PfeI	GAWTC	7 cut(s)	920, 1082, 1109, 1140, 1634, 1805, 2327
PflMI	CCANNNNNTGG	1 cut(s)	2284
PkrI	GCNGC	5 cut(s)	109, 427, 1606, 1794, 1951
PleI	GAGTC	4 cut(s)	276, 1020, 2242, 2503
PmaCI	CACGTG	1 cut(s)	233
PmlI	CACGTG	1 cut(s)	233
PpsI	GAGTC	4 cut(s)	276, 1020, 2242, 2503
Ppu21I	YACGTR	1 cut(s)	233
PpuMI	RGGWCCY	1 cut(s)	1057
Psp124BI	GAGCTC	2 cut(s)	1267, 2000
Psp1406I	AACGTT	1 cut(s)	1961
Psp5II	RGGWCCY	1 cut(s)	1057
Psp6I	CCWGG	8 cut(s)	188, 326, 367, 796, 1059, 1113, 1744, 2196
PspCI	CACGTG	1 cut(s)	233
PspFI	CCCAGC	1 cut(s)	1319
PspGI	CCWGG	8 cut(s)	188, 326, 367, 796, 1059, 1113, 1744, 2196
PspN4I	GGNNCC	5 cut(s)	382, 822, 1194, 1562, 2202
PspPI	GGNCC	6 cut(s)	337, 821, 1057, 2047, 2207, 2223
PspPPI	RGGWCCY	1 cut(s)	1057
PsuI	RGATCY	1 cut(s)	730
PvuII	CAGCTG	2 cut(s)	343, 812
RsaI	GTAC	5 cut(s)	145, 1415, 1562, 1913, 2451
RsaNI	GTAC	5 cut(s)	144, 1414, 1561, 1912, 2450
RseI	CAYNNNNRTG	2 cut(s)	470, 1301
SacI	GAGCTC	2 cut(s)	1267, 2000
SaqAI	TTAA	8 cut(s)	516, 543, 653, 726, 852, 1293, 1712, 2055
SatI	GCNGC	5 cut(s)	108, 426, 1605, 1793, 1950
Sau3AI	GATC	8 cut(s)	148, 730, 1391, 1444, 1640, 1850, 2114, 2361
Sau96I	GGNCC	6 cut(s)	337, 821, 1057, 2047, 2207, 2223
ScaI	AGTACT	1 cut(s)	1415
SchI	GAGTC	4 cut(s)	276, 1020, 2242, 2504
SduI	GDGCHC	3 cut(s)	884, 1267, 2000
SfaNI	GCATC	4 cut(s)	425, 1010, 1536, 1616
SinI	GGWCC	6 cut(s)	337, 821, 1057, 2047, 2207, 2223
SmiMI	CAYNNNNRTG	2 cut(s)	470, 1301
SphI	GCATGC	1 cut(s)	275
Sse9I	AATT	6 cut(s)	612, 687, 711, 982, 1206, 2131
SseBI	AGGCCT	1 cut(s)	706
SsiI	CCGC	2 cut(s)	1105, 1735
SspI	AATATT	2 cut(s)	79, 541
SspMI	CTAG	2 cut(s)	521, 2252
SstI	GAGCTC	2 cut(s)	1267, 2000
StuI	AGGCCT	1 cut(s)	706
StyI	CCWWGG	4 cut(s)	1086, 1426, 1774, 1936
TaiI	ACGT	3 cut(s)	235, 1276, 1964
TaqI	TCGA	2 cut(s)	1718, 1808
TasI	AATT	6 cut(s)	612, 687, 711, 982, 1206, 2131
TatI	WGTACW	3 cut(s)	143, 1413, 1911
TfiI	GAWTC	7 cut(s)	920, 1082, 1109, 1140, 1634, 1805, 2327
Tru1I	TTAA	8 cut(s)	516, 543, 653, 726, 852, 1293, 1712, 2055
Tru9I	TTAA	8 cut(s)	516, 543, 653, 726, 852, 1293, 1712, 2055
TscAI	CASTG	7 cut(s)	405, 996, 1107, 1386, 1401, 2049, 2394
TseFI	GTSAC	5 cut(s)	778, 1616, 1721, 2122, 2496
TseI	GCWGC	5 cut(s)	107, 425, 1604, 1792, 1949
Tsp45I	GTSAC	5 cut(s)	778, 1616, 1721, 2122, 2496
TspDTI	ATGAA	5 cut(s)	522, 1230, 1230, 1459, 1541
TspGWI	ACGGA	1 cut(s)	2215
TspRI	CASTG	7 cut(s)	405, 996, 1107, 1386, 1401, 2049, 2394
Van91I	CCANNNNNTGG	1 cut(s)	2284
VneI	GTGCAC	1 cut(s)	880
VpaK11BI	GGWCC	6 cut(s)	337, 821, 1057, 2047, 2207, 2223
XagI	CCTNNNNNAGG	1 cut(s)	1333
XbaI	TCTAGA	1 cut(s)	520
XceI	RCATGY	3 cut(s)	275, 482, 1753
XcmI	CCANNNNNNNNNTGG	3 cut(s)	892, 1228, 2217
XmnI	GAANNNNTTC	2 cut(s)	307, 2331
XspI	CTAG	2 cut(s)	521, 2252
ZrmI	AGTACT	1 cut(s)	1415
Zsp2I	ATGCAT	1 cut(s)	604

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.