Rw5G035820

ABC transporter G family member

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
62263896 .. 62275080
11185 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G035820.1

Sequence Viewer

Length: 3414 bp
ATGTTCAGCAGAGAGCACCTCTTTCTCTCTCTTAGGGTTCTTCTCCATGTGCTCGCTCTCAGCCTTGTTTGGCCCCCGGCGCCGCGTGTTTTCAGCCAGGACGTCGGCGGCGGCGATGGCAGTGGCGGCGGCGATGGCAGTGGCGGTGGCGATGGCGGTGGCGGAGGCGATGGCGGAGGCGGAGGTGATGTCGATGTCGGTGGTGGTGGTGGAGGAGACGCAGTCTCTGCAGGGTATAAGGGCTTCACCACCGAACTCATCTTGAGTCGTTTCTCCAATGTCACCCCCATTCTCAAAGATGAACTCAAGGATTCGTTCAGCTACTGCGTCATTGACGTAGACGAGGATTGGAATGGGGCTTTCAATTTCTCAGACGATGCAACATTCATTACCAACTGCGCCAAAAAAATGAAAGGTGGAGGTTTGGGAATGATTACGCAGCGGTTGTGCACTTTTAAAGAATTATCGATGTATGGTGAAAGTTTAGTACAAGTCAAGAAAAGCAGTAAATTGAAACCGAATAAGAACTGTAACCTGTCTACATGGAATCCTGGATGTGAACCTGGGTGGGCTTGTGGAACTACTGAGGAAGTTGACGTGAAAAATAAAACATATGTGCCTGCCAGAACTGAAGACTGTGCACCTTGTTGTGAGGGTTTTTTCTGCCCTCATGGTCTTACTTGCATGATCCCTTGCCCAAAAGGTGCTTACTGCCCACTTGGAAAGCTCAATAGCACTACTGGTATATGCGTGCCATACCGTTATCACCTACCTCCAGGGAAGTCAAACCACACTTGTGGAGGAGCAGATAGGTGGGCTGATGTCTTGAGTAGTAAAGAGGTATTCTGTTCGGGTGGATCATACTGTCCGTCTAGCATCCAAAAAAATCCTTGCAGTAGTGGACATTATTGCAGGCTGGGCTCCACATCTCAGGAAGGATGTTTCAAAATGGCAAGTTGTAATGCGAAATCAGAAAATCAAAATATTACTGCATATGGTATCATGCTTTTTGCTGCAATAATAGTTATACTTATTATTATATATAACTGTACTGATCAAGTGCTTGCCACCCGAGAGAAAAGACAAGCAAAATCCAGGGAAAAGGCTGTTCAAAGTGTAAGAGAAACAGCACAAGCACGTGAAAAATGGAAATCTGCAAAAGACATTGCTAAGAAGCATGCTGTTGGACTCTCAACACAGTTTTCACGTACATTTTCTCGCAGAAAATCCACCAGGCATTCGGACCAGCTGAAAGGAACAGGACAAGCTAAACCTGGAACAGATGGTGCCTTGCCACCTATGCCACTGACTGCAATAGGTGCATCTGAAGCAGCAACATCTAAAGGAAAGAAAAAGGAAAAAAGCAACCTCACACAAATGTTACATGCTATTGAGAATGACCCAGATAGTAATGAAGGCTTTAATCTAGAGATAGGTGATAAAAATATTAAAAAGCACGCACCAAAAGGTAAGCAGTTGCATACCCAAAGCCAGATTTTCAAGTATGCATATGGTCAAATTGAGAAGGAAAAGGCTTTACAGGAGCAGACAGCAAACTTAACCTTCTCTGGGGTTATACAAATGGCTGGTGGAATTGAAATCCAAAAGAGGCCTCCAATTGAGGTTGCTTTTAAAGATCTAACCCTCACATTGAAAGGGAAAAATATACATCTTATGAGATGTGTGACTGGGAAAATATCACCAGGCCGGGTTTCAGCTGTCATGGGTCCATCTGGAGCAGGAAAAACAACTTTTCTTAATGCTTTGTTAGGAAAAGTGAGAGGGTGCACCATGAGTGGTATGGTTCTTGTAAATGGAAAGATGGAATCTATCAACTCATATAAGAAAATCATAGGCTTTGTTCCACAAGATGATATTGTGCATGGCAATTTGACAGTGGAAGAAAATCTCTGGTTCAGCGCAAGATGCAGACTCTCTTCCAATCTGCCTCAACCAGAAAAGGTCCTGGTTGTTGAAAGAGTTATTGAATCCTTGGGCTTGCAGGCGGTGCGGGATTCCCTGGTTGGAACGGTAGAGAAGCGAGGAATCTCTGGAGGTCAAAGAAAAAGAGTAAATGTTGGGCTGGAAATGGTCATGGAACCATCACTTCTAATTTTAGATGAACCCACATCTGGTTTGGATAGTTCATCTTCTAATCTGCTACTTAGAGCTCTTAGACGTGAGGCTCTTGAAGGAGTTAACATTTGCATGGTTGTCCACCAGCCCAGCTACACCTTGTTCAGGATGTTTGATGATTTGATACTTCTCGCTAAAGGTGGGCTTACAGTGTATCATGGATCAGTGAAGAAAGTTGAAGAGTACTTCAAGAGCCTTGGGATTATTGTTCCTGATCGTGTCAATCCTCCAGACTATTTCATTGACATTTTGGAAGGCTTAGTAAAACCAAGCACAAGCTCAGGGGTGGACTATAAACAACTACCCGTTAGGTGGATGCTTCATAATGGGTACCCAGTTCCTATGGATATGCTTCAGACTTCTGAGGGAATGGCTGCATCAACAAGTGACAGTTCAGCCCATGATTCTGGATCGGAGGGTTTTTGGCAGGATGTCAAGTGTAATGTTGAGGTGAAAAAGGACAATATACAGCATAATCTCTTAAAGTCAAGTGACTTATCGGAGCGGATTACCCCTGGCATGTTCCTGCAATATAGATACTTCCTTGGCAGGGTTGGTAAGCAGCGATTACGAGAATCAAGGACACAAGCAATAGATTTTCTTATTTTATTGCTTGCTGGATCATGCTTAGGAGTTCTTGCTAAAGTAAGCGAGGAGACCTTCGGTTATCATGGTTATATGTACACCGTCATAGCAGTTTCTCTCCTTGGCAAGATTGCAGCTTTGAGAACGTTTGGACTGGATAAATTGCACTACTGGAGAGAGAGCTCTGCTGGCATGAGTAGCTTGGCTTACTTTCTTTCAAAAGATACAGTGGACCATTTTAATACGGTCATCAAGCCTCTCGTTTACCTCTCCATGTTCTATTTCTTCAACAATCCAAGATCATCTGTCACAGATAATTATGTCGTTTTGTTATGTTTGGTTTACTGCGTAACTGGTATAGCTTATGCCTTGTCCATATACCTGGCTCCCGGTCCAGCTCAACTGTGGTCCGTGCTTCTCCCAGTCGTTTTGACTCTAGTAGGAAACAATACTATTGAAAGCCATATTGTGGAAAAAATATCTAACTTCTGCTATACTAAGTGGGCTTTGGAATCTTTTCTCGTAGCAAATGCTCAAAAGTACTCTGGGGTGTGGATAATAACAAGATGTGCTACACTTCAGAAGAGTCACTATGACCTCAAGAATTGGTACCCTAATTTAGCCATGCTCATTACTCTGGGTGTATTAACAAGAGTCATTGCATACATTATTTTGGTCTTCAAAAAGAAGTAG

Protein Analysis

1137

Amino Acids

124.21

Weight (kDa)

8.9

Isoelectric Point (pI)

41.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 562 - 711 1.3e-23 ABC transporter
ABC2_membrane_7 PF19055 740 - 1137 1.2e-210 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 105
Acc65I GGTACC 2 cut(s) 2466, 3330
AccB1I GGYRCC 4 cut(s) 79, 1286, 2466, 3330
AccB7I CCANNNNNTGG 1 cut(s) 3190
AccBSI CCGCTC 1 cut(s) 2641
AccI GTMKAC 2 cut(s) 339, 539
AccII CGCG 1 cut(s) 85
AclI AACGTT 1 cut(s) 2867
AclWI GGATC 5 cut(s) 682, 865, 2305, 2554, 2764
AcuI CTGAAG 4 cut(s) 651, 1347, 2474, 3284
AcvI CACGTG 1 cut(s) 1139
AcyI GRCGYC 2 cut(s) 80, 102
AfaI GTAC 8 cut(s) 489, 1051, 1210, 2321, 2468, 2819, 3263, 3332
AfiI CCNNNNNNNGG 6 cut(s) 1569, 2132, 2241, 2448, 2686, 3190
AjiI CACGTC 2 cut(s) 598, 2180
AleI CACNNNNGTG 1 cut(s) 795
Alw21I GWGCWC 7 cut(s) 18, 54, 452, 643, 1790, 2173, 2906
Alw26I GTCTC 3 cut(s) 210, 229, 2786
Alw44I GTGCAC 3 cut(s) 448, 639, 1786
AlwI GGATC 5 cut(s) 682, 865, 2305, 2554, 2764
AlwNI CAGNNNCTG 2 cut(s) 227, 324
Ama87I CYCGRG 1 cut(s) 1071
AoxI GGCC 3 cut(s) 71, 1610, 1705
ApaLI GTGCAC 3 cut(s) 448, 639, 1786
ApeKI GCWGC 6 cut(s) 439, 1013, 1331, 2510, 2698, 2855
Asp700I GAANNNNTTC 1 cut(s) 3237
Asp718I GGTACC 2 cut(s) 2466, 3330
AspLEI GCGC 3 cut(s) 82, 401, 1922
AspS9I GGNCC 7 cut(s) 72, 1243, 1727, 1963, 2953, 3113, 3129
AsuC2I CCSGG 3 cut(s) 77, 1709, 3111
AsuHPI GGTGA 8 cut(s) 197, 238, 274, 488, 758, 1448, 1692, 2599
AvaI CYCGRG 1 cut(s) 1071
AvaII GGWCC 6 cut(s) 1243, 1727, 1963, 2953, 3113, 3129
BaeGI GKGCMC 3 cut(s) 452, 643, 1790
BanI GGYRCC 4 cut(s) 79, 1286, 2466, 3330
BanII GRGCYC 3 cut(s) 923, 2173, 2906
BarI GAAGNNNNNNTAC 2 cut(s) 227, 259
BbrPI CACGTG 1 cut(s) 1139
BbsI GAAGAC 2 cut(s) 639, 3391
Bbv12I GWGCWC 7 cut(s) 18, 54, 452, 643, 1790, 2173, 2906
BbvI GCAGC 6 cut(s) 451, 1000, 1343, 2497, 2710, 2867
BccI CCATC 8 cut(s) 110, 128, 146, 164, 1277, 1738, 1816, 2110
BclI TGATCA 1 cut(s) 1054
BcnI CCSGG 3 cut(s) 77, 1709, 3111
BcoDI GTCTC 3 cut(s) 210, 229, 2786
BfaI CTAG 3 cut(s) 873, 1427, 3158
BfmI CTRYAG 1 cut(s) 228
BfoI RGCGCY 1 cut(s) 83
BglII AGATCT 1 cut(s) 1636
BmcAI AGTACT 2 cut(s) 2321, 3263
Bme18I GGWCC 6 cut(s) 1243, 1727, 1963, 2953, 3113, 3129
BmeT110I CYCGRG 1 cut(s) 1071
BmgBI CACGTC 2 cut(s) 598, 2180
BmgT120I GGNCC 7 cut(s) 72, 1243, 1727, 1963, 2953, 3113, 3129
BmiI GGNNCC 9 cut(s) 74, 81, 922, 1288, 1728, 2100, 2468, 3108, 3332
BmrI ACTGGG 3 cut(s) 1698, 2465, 3137
BmsI GCATC 6 cut(s) 367, 885, 1331, 1916, 2442, 2522
BmuI ACTGGG 3 cut(s) 1698, 2465, 3137
BpiI GAAGAC 2 cut(s) 639, 3391
BplI GAGNNNNNCTC 1 cut(s) 35
BpmI CTGGAG 5 cut(s) 759, 1755, 2073, 2349, 2914
Bpu10I CCTNAGC 2 cut(s) 2416, 2764
BpuEI CTTGAG 4 cut(s) 283, 290, 847, 3305
BpuMI CCSGG 3 cut(s) 77, 1709, 3111
Bsa29I ATCGAT 1 cut(s) 467
BsaAI YACGTR 2 cut(s) 1139, 1208
BsaHI GRCGYC 2 cut(s) 80, 102
BsaI GGTCTC 1 cut(s) 2786
BsaXI ACNNNNNCTCC 4 cut(s) 174, 204, 207, 237
Bsc4I CCNNNNNNNGG 6 cut(s) 1569, 2132, 2241, 2448, 2686, 3190
Bse1I ACTGG 7 cut(s) 745, 1693, 2471, 2880, 2897, 3079, 3143
Bse3DI GCAATG 2 cut(s) 1164, 3378
BseCI ATCGAT 1 cut(s) 467
BseGI GGATG 6 cut(s) 560, 876, 944, 2250, 2457, 2572
BseLI CCNNNNNNNGG 6 cut(s) 1569, 2132, 2241, 2448, 2686, 3190
BseMI GCAATG 2 cut(s) 1164, 3378
BseMII CTCAG 6 cut(s) 73, 384, 576, 944, 2430, 2490
BseNI ACTGG 7 cut(s) 745, 1693, 2471, 2880, 2897, 3079, 3143
BseRI GAGGAG 3 cut(s) 228, 816, 2804
BseSI GKGCMC 3 cut(s) 452, 643, 1790
BseXI GCAGC 6 cut(s) 451, 1000, 1343, 2497, 2710, 2867
BseYI CCCAGC 2 cut(s) 916, 2225
Bsh1236I CGCG 1 cut(s) 85
BshFI GGCC 3 cut(s) 73, 1612, 1707
BshNI GGYRCC 4 cut(s) 79, 1286, 2466, 3330
BshVI ATCGAT 1 cut(s) 467
BsiHKAI GWGCWC 7 cut(s) 18, 54, 452, 643, 1790, 2173, 2906
BsiHKCI CYCGRG 1 cut(s) 1071
BsiSI CCGG 3 cut(s) 77, 1708, 3111
BslI CCNNNNNNNGG 6 cut(s) 1569, 2132, 2241, 2448, 2686, 3190
BsmAI GTCTC 3 cut(s) 210, 229, 2786
BsmBI CGTCTC 1 cut(s) 210
BsmI GAATGC 1 cut(s) 1237
BsnI GGCC 3 cut(s) 73, 1612, 1707
Bso31I GGTCTC 1 cut(s) 2786
BsoBI CYCGRG 1 cut(s) 1071
Bsp1286I GDGCHC 8 cut(s) 18, 54, 452, 643, 923, 1790, 2173, 2906
Bsp1407I TGTACA 1 cut(s) 2817
Bsp143I GATC 9 cut(s) 687, 857, 1054, 1636, 2297, 2350, 2546, 2756, 3020
BspANI GGCC 3 cut(s) 73, 1612, 1707
BspCNI CTCAG 6 cut(s) 72, 383, 577, 943, 2429, 2491
BspDI ATCGAT 1 cut(s) 467
BspFNI CGCG 1 cut(s) 85
BspLI GGNNCC 9 cut(s) 74, 81, 922, 1288, 1728, 2100, 2468, 3108, 3332
BspMAI CTGCAG 1 cut(s) 232
BspPI GGATC 5 cut(s) 682, 865, 2305, 2554, 2764
BspT107I GGYRCC 4 cut(s) 79, 1286, 2466, 3330
BspTNI GGTCTC 1 cut(s) 2786
BsrBI CCGCTC 1 cut(s) 2641
BsrDI GCAATG 2 cut(s) 1164, 3378
BsrGI TGTACA 1 cut(s) 2817
BsrI ACTGG 7 cut(s) 745, 1693, 2471, 2880, 2897, 3079, 3143
BssMI GATC 9 cut(s) 687, 857, 1054, 1636, 2297, 2350, 2546, 2756, 3020
BssNI GRCGYC 2 cut(s) 80, 102
BssT1I CCWWGG 4 cut(s) 1992, 2332, 2680, 2842
Bst6I CTCTTC 3 cut(s) 1942, 2310, 3299
BstACI GRCGYC 2 cut(s) 80, 102
BstAPI GCANNNNNTGC 3 cut(s) 227, 1319, 2008
BstAUI TGTACA 1 cut(s) 2817
BstBAI YACGTR 2 cut(s) 1139, 1208
BstENI CCTNNNNNAGG 1 cut(s) 2239
BstF5I GGATG 6 cut(s) 560, 876, 944, 2250, 2457, 2572
BstFNI CGCG 1 cut(s) 85
BstH2I RGCGCY 1 cut(s) 83
BstHHI GCGC 3 cut(s) 82, 401, 1922
BstKTI GATC 9 cut(s) 690, 860, 1057, 1639, 2300, 2353, 2549, 2759, 3023
BstMAI GTCTC 3 cut(s) 210, 229, 2786
BstMBI GATC 9 cut(s) 687, 857, 1054, 1636, 2297, 2350, 2546, 2756, 3020
BstNSI RCATGY 3 cut(s) 1181, 1388, 2659
BstSFI CTRYAG 1 cut(s) 228
BstSLI GKGCMC 3 cut(s) 452, 643, 1790
BstUI CGCG 1 cut(s) 85
BstV1I GCAGC 6 cut(s) 451, 1000, 1343, 2497, 2710, 2867
BstV2I GAAGAC 2 cut(s) 639, 3391
BstX2I RGATCY 1 cut(s) 1636
BstXI CCANNNNNNTGG 3 cut(s) 797, 2543, 3103
BstYI RGATCY 1 cut(s) 1636
Bsu15I ATCGAT 1 cut(s) 467
BsuRI GGCC 3 cut(s) 73, 1612, 1707
BsuTUI ATCGAT 1 cut(s) 467
BtgZI GCGATG 4 cut(s) 129, 147, 165, 183
BtrI CACGTC 2 cut(s) 598, 2180
BtsCI GGATG 6 cut(s) 560, 876, 944, 2250, 2457, 2572
BtsI GCAGTG 2 cut(s) 127, 145
BtsIMutI CAGTG 7 cut(s) 127, 145, 1304, 1902, 2292, 2307, 2955
CaiI CAGNNNCTG 2 cut(s) 227, 324
CfoI GCGC 3 cut(s) 82, 401, 1922
Cfr13I GGNCC 7 cut(s) 72, 1243, 1727, 1963, 2953, 3113, 3129
ClaI ATCGAT 1 cut(s) 467
CseI GACGC 2 cut(s) 227, 316
Csp6I GTAC 8 cut(s) 488, 1050, 1209, 2320, 2467, 2818, 3262, 3331
CviQI GTAC 8 cut(s) 488, 1050, 1209, 2320, 2467, 2818, 3262, 3331
DinI GGCGCC 1 cut(s) 81
DpnI GATC 9 cut(s) 689, 859, 1056, 1638, 2299, 2352, 2548, 2758, 3022
DpnII GATC 9 cut(s) 687, 857, 1054, 1636, 2297, 2350, 2546, 2756, 3020
DraI TTTAAA 2 cut(s) 457, 1633
Eam1104I CTCTTC 3 cut(s) 1942, 2310, 3299
EarI CTCTTC 3 cut(s) 1942, 2310, 3299
EciI GGCGGA 3 cut(s) 177, 189, 195
Ecl136II GAGCTC 2 cut(s) 2171, 2904
Eco130I CCWWGG 4 cut(s) 1992, 2332, 2680, 2842
Eco147I AGGCCT 1 cut(s) 1612
Eco24I GRGCYC 3 cut(s) 923, 2173, 2906
Eco31I GGTCTC 1 cut(s) 2786
Eco47I GGWCC 6 cut(s) 1243, 1727, 1963, 2953, 3113, 3129
Eco53kI GAGCTC 2 cut(s) 2171, 2904
Eco57I CTGAAG 4 cut(s) 651, 1347, 2474, 3284
Eco72I CACGTG 1 cut(s) 1139
Eco88I CYCGRG 1 cut(s) 1071
EcoICRI GAGCTC 2 cut(s) 2171, 2904
EcoNI CCTNNNNNAGG 1 cut(s) 2239
EcoO109I RGGNCCY 1 cut(s) 1963
EcoT14I CCWWGG 4 cut(s) 1992, 2332, 2680, 2842
EcoT22I ATGCAT 1 cut(s) 1510
EcoT38I GRGCYC 3 cut(s) 923, 2173, 2906
EgeI GGCGCC 1 cut(s) 81
EheI GGCGCC 1 cut(s) 81
ErhI CCWWGG 4 cut(s) 1992, 2332, 2680, 2842
Esp3I CGTCTC 1 cut(s) 210
FalI AAGNNNNNCTT 2 cut(s) 2265, 2297
FauI CCCGC 1 cut(s) 2004
FauNDI CATATG 3 cut(s) 613, 994, 1510
FbaI TGATCA 1 cut(s) 1054
FblI GTMKAC 2 cut(s) 339, 539
FokI GGATG 6 cut(s) 567, 863, 951, 2257, 2464, 2579
FriOI GRGCYC 3 cut(s) 923, 2173, 2906
FspBI CTAG 3 cut(s) 873, 1427, 3158
GlaI GCGC 3 cut(s) 81, 400, 1921
GsaI CCCAGC 2 cut(s) 920, 2229
GsuI CTGGAG 5 cut(s) 759, 1755, 2073, 2349, 2914
HaeII RGCGCY 1 cut(s) 83
HaeIII GGCC 3 cut(s) 73, 1612, 1707
HapII CCGG 3 cut(s) 77, 1708, 3111
HgaI GACGC 2 cut(s) 227, 316
HhaI GCGC 3 cut(s) 82, 401, 1922
Hin1I GRCGYC 2 cut(s) 80, 102
Hin6I GCGC 3 cut(s) 80, 399, 1920
HinP1I GCGC 3 cut(s) 80, 399, 1920
HincII GTYRAC 2 cut(s) 595, 2200
HindII GTYRAC 2 cut(s) 595, 2200
HpaI GTTAAC 1 cut(s) 2200
HpaII CCGG 3 cut(s) 77, 1708, 3111
HphI GGTGA 8 cut(s) 197, 238, 274, 488, 758, 1448, 1692, 2599
Hpy188I TCNGA 9 cut(s) 373, 973, 1243, 1327, 2493, 2500, 2551, 2638, 3303
Hpy99I CGWCG 1 cut(s) 107
HpyAV CCTTC 7 cut(s) 929, 1409, 1519, 1573, 2186, 2384, 2806
HpyCH4IV ACGT 7 cut(s) 102, 336, 597, 1138, 1207, 2179, 2867
HpySE526I ACGT 7 cut(s) 102, 336, 597, 1138, 1207, 2179, 2867
Hsp92I GRCGYC 2 cut(s) 80, 102
HspAI GCGC 3 cut(s) 80, 399, 1920
KasI GGCGCC 1 cut(s) 79
KpnI GGTACC 2 cut(s) 2470, 3334
Ksp22I TGATCA 1 cut(s) 1054
KspAI GTTAAC 1 cut(s) 2200
Kzo9I GATC 9 cut(s) 687, 857, 1054, 1636, 2297, 2350, 2546, 2756, 3020
LmnI GCTCC 6 cut(s) 803, 926, 1543, 1736, 2638, 3112
Lsp1109I GCAGC 6 cut(s) 451, 1000, 1343, 2497, 2710, 2867
LweI GCATC 6 cut(s) 367, 885, 1331, 1916, 2442, 2522
MaeI CTAG 3 cut(s) 873, 1427, 3158
MaeII ACGT 7 cut(s) 102, 336, 597, 1138, 1207, 2179, 2867
MaeIII GTNAC 9 cut(s) 280, 530, 1380, 1684, 2522, 2627, 3028, 3070, 3308
MalI GATC 9 cut(s) 689, 859, 1056, 1638, 2299, 2352, 2548, 2758, 3022
MbiI CCGCTC 1 cut(s) 2641
MboI GATC 9 cut(s) 687, 857, 1054, 1636, 2297, 2350, 2546, 2756, 3020
MfeI CAATTG 1 cut(s) 1617
MflI RGATCY 1 cut(s) 1636
MhlI GDGCHC 8 cut(s) 18, 54, 452, 643, 923, 1790, 2173, 2906
Mly113I GGCGCC 1 cut(s) 80
MlyI GAGTC 6 cut(s) 274, 1182, 1926, 3148, 3316, 3384
MmeI TCCRAC 2 cut(s) 1165, 2005
Mph1103I ATGCAT 1 cut(s) 1510
MroXI GAANNNNTTC 1 cut(s) 3237
MslI CAYNNNNRTG 3 cut(s) 795, 1376, 2207
MspA1I CMGCKG 3 cut(s) 442, 1249, 1718
MspI CCGG 3 cut(s) 77, 1708, 3111
MunI CAATTG 1 cut(s) 1617
Mva1269I GAATGC 1 cut(s) 1237
MvnI CGCG 1 cut(s) 85
NarI GGCGCC 1 cut(s) 80
NciI CCSGG 3 cut(s) 77, 1709, 3111
NdeI CATATG 3 cut(s) 613, 994, 1510
NdeII GATC 9 cut(s) 687, 857, 1054, 1636, 2297, 2350, 2546, 2756, 3020
NlaIV GGNNCC 9 cut(s) 74, 81, 922, 1288, 1728, 2100, 2468, 3108, 3332
NmuCI GTSAC 6 cut(s) 280, 1684, 2522, 2627, 3028, 3308
NsiI ATGCAT 1 cut(s) 1510
NspI RCATGY 3 cut(s) 1181, 1388, 2659
OliI CACNNNNGTG 1 cut(s) 795
PaeI GCATGC 1 cut(s) 1181
PceI AGGCCT 1 cut(s) 1612
PcsI WCGNNNNNNNCGW 1 cut(s) 111
PctI GAATGC 1 cut(s) 1237
PdmI GAANNNNTTC 1 cut(s) 3237
PfeI GAWTC 9 cut(s) 311, 547, 1826, 1988, 2015, 2046, 2540, 2711, 3233
PflFI GACNNNGTC 1 cut(s) 221
PflMI CCANNNNNTGG 1 cut(s) 3190
PfoI TCCNGGA 1 cut(s) 550
PleI GAGTC 6 cut(s) 273, 1182, 1926, 3148, 3315, 3383
PluTI GGCGCC 1 cut(s) 83
PmaCI CACGTG 1 cut(s) 1139
PmlI CACGTG 1 cut(s) 1139
PpsI GAGTC 6 cut(s) 273, 1182, 1926, 3148, 3315, 3383
Ppu21I YACGTR 2 cut(s) 1139, 1208
PpuMI RGGWCCY 1 cut(s) 1963
Psp124BI GAGCTC 2 cut(s) 2173, 2906
Psp1406I AACGTT 1 cut(s) 2867
Psp5II RGGWCCY 1 cut(s) 1963
PspCI CACGTG 1 cut(s) 1139
PspFI CCCAGC 2 cut(s) 916, 2225
PspN4I GGNNCC 9 cut(s) 74, 81, 922, 1288, 1728, 2100, 2468, 3108, 3332
PspPI GGNCC 7 cut(s) 72, 1243, 1727, 1963, 2953, 3113, 3129
PspPPI RGGWCCY 1 cut(s) 1963
PstI CTGCAG 1 cut(s) 232
PstNI CAGNNNCTG 2 cut(s) 227, 324
PsuI RGATCY 1 cut(s) 1636
PsyI GACNNNGTC 1 cut(s) 221
PvuII CAGCTG 2 cut(s) 1249, 1718
RsaI GTAC 8 cut(s) 489, 1051, 1210, 2321, 2468, 2819, 3263, 3332
RsaNI GTAC 8 cut(s) 488, 1050, 1209, 2320, 2467, 2818, 3262, 3331
RseI CAYNNNNRTG 3 cut(s) 795, 1376, 2207
SacI GAGCTC 2 cut(s) 2173, 2906
Sau3AI GATC 9 cut(s) 687, 857, 1054, 1636, 2297, 2350, 2546, 2756, 3020
Sau96I GGNCC 7 cut(s) 72, 1243, 1727, 1963, 2953, 3113, 3129
ScaI AGTACT 2 cut(s) 2321, 3263
SchI GAGTC 6 cut(s) 274, 1182, 1926, 3148, 3316, 3384
SduI GDGCHC 8 cut(s) 18, 54, 452, 643, 923, 1790, 2173, 2906
SfaNI GCATC 6 cut(s) 367, 885, 1331, 1916, 2442, 2522
SfcI CTRYAG 1 cut(s) 228
SfoI GGCGCC 1 cut(s) 81
SinI GGWCC 6 cut(s) 1243, 1727, 1963, 2953, 3113, 3129
SmiMI CAYNNNNRTG 3 cut(s) 795, 1376, 2207
SmlI CTYRAG 4 cut(s) 262, 305, 826, 3320
SmoI CTYRAG 4 cut(s) 262, 305, 826, 3320
SphI GCATGC 1 cut(s) 1181
SseBI AGGCCT 1 cut(s) 1612
SspDI GGCGCC 1 cut(s) 79
SspI AATATT 2 cut(s) 985, 1447
SspMI CTAG 3 cut(s) 873, 1427, 3158
SstI GAGCTC 2 cut(s) 2173, 2906
StuI AGGCCT 1 cut(s) 1612
StyI CCWWGG 4 cut(s) 1992, 2332, 2680, 2842
TaiI ACGT 7 cut(s) 105, 339, 600, 1141, 1210, 2182, 2870
TaqI TCGA 2 cut(s) 192, 467
TatI WGTACW 5 cut(s) 487, 1049, 2319, 2817, 3261
TauI GCSGC 5 cut(s) 85, 111, 114, 129, 132
TfiI GAWTC 9 cut(s) 311, 547, 1826, 1988, 2015, 2046, 2540, 2711, 3233
TscAI CASTG 7 cut(s) 127, 145, 1311, 1902, 2292, 2307, 2955
TseFI GTSAC 6 cut(s) 280, 1684, 2522, 2627, 3028, 3308
TseI GCWGC 6 cut(s) 439, 1013, 1331, 2510, 2698, 2855
Tsp45I GTSAC 6 cut(s) 280, 1684, 2522, 2627, 3028, 3308
TspDTI ATGAA 8 cut(s) 315, 376, 425, 1428, 2136, 2136, 2365, 2447
TspGWI ACGGA 2 cut(s) 858, 3121
TspRI CASTG 7 cut(s) 127, 145, 1311, 1902, 2292, 2307, 2955
Tth111I GACNNNGTC 1 cut(s) 221
Van91I CCANNNNNTGG 1 cut(s) 3190
VneI GTGCAC 3 cut(s) 448, 639, 1786
VpaK11BI GGWCC 6 cut(s) 1243, 1727, 1963, 2953, 3113, 3129
XagI CCTNNNNNAGG 1 cut(s) 2239
XbaI TCTAGA 1 cut(s) 1426
XceI RCATGY 3 cut(s) 1181, 1388, 2659
XcmI CCANNNNNNNNNTGG 3 cut(s) 1798, 2134, 3123
XmiI GTMKAC 2 cut(s) 339, 539
XmnI GAANNNNTTC 1 cut(s) 3237
XspI CTAG 3 cut(s) 873, 1427, 3158
ZraI GACGTC 1 cut(s) 103
ZrmI AGTACT 2 cut(s) 2321, 3263
Zsp2I ATGCAT 1 cut(s) 1510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.