Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0003083

Physical Location & Seq

Genomic Coordinates Forward (+)

36968688 .. 36970388

Gene Structure 1701 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0312600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGTCCGAGAGTTCAAGTCCAACGGAAGCTGTACTCTTCTATGCTCGCATGCTCTCTTCTTTGGAAAATTTGAACGGGGTCGAGTTTTTGCTCCCTGCATTGCTCAAAGCGTGCAGCAAGTCACGTTCTTTAGAGGAGGGGAGGCAAGTTCATGGCCAGATATTGAAAACCCAGATGTTGTTCGATCCGTATGTTGCCAATGCATTGATTAGGATGTACTCCGAGCTGGGATGTATTGGATTGGCACACAGGGTGTTTGATAAAATGGCTCAGAGAGACCAAGTTTCTTGGAATTCACTGATTACTGGTTATTTGAGGGTCGGGGAGGTTGAGTTGGCTCGTGCGATTTTTAATGAGATTCCGGAGAGGGACTTGGTTTCGTGTAATGCAATGATTGATGGGTATGGGAAGAGTGGCAAGTGTGAGCTTGCTGAGGAGGTTTTTAGGACAATGCATCATAAAGATGTAGTTACTTGGACGTCAATGGTTTCAGGGTATGTATTCAATCACCGTCCGAAGGAAGCATTGGGTTTGTTTAGGGAAATGTTGAGTCAGGGCATTCGGCCTGATGCCCCGGCTCTTGTTAGTGTTCTCTCAGCCATTGCCGACTTGGGTTTCGTTGAGGAAGGCAAATGGGTGCATGCTTATATTTGTACGAATAAGATTAGGTTGAATTCAGGGTTTATTGGATCAGCTCTTATAGATATGTATGCTAAATGTGGGCATATAGAGAATGCTTACCATGTCTTTGAAAACATTGCTCATTATAGGAACATTGGGGACTGGAATTGCATGATCTCTGGCCTTGCTATGCATGGCCTAGGTCATGAAGCGCTGGACATTTTCCTTGACATGAAAATGAAAGAAATTGAGCCTGATGAGATCACTTTCTTAGGACTTCTTACTGCTTGTAACCATGGAGGTCTAGTTGATGAAGGTAGATACTGTTTTGAACTCATGCAGGAGAAGTACGGACTTGTTCCTAAGATTCAGCATTATGGATGCATTATTGATCTTTTAGGTAGAGCAGGGCACTTGGAGGAGGCGGTTGACGTTATACAGAATATGCCCATAAAGGCGGATGCTATAGTTTGGAAGGCAATTCTCAGCGCTTGCACGATTCATGCTAATGTTGCAATTGGGGAAAGTGCTGCCCTCAAGGCAATAGATTTGGCTCCAGATGACTCAAGTTGTTACATTCTCCTCTCGAATCTTTATGCCAAAGTAGGGAGATGGGATGATGTGGGCAATGTTAGATTGATGATGAAACAGAGGGGAGTTCGAAAGATTCCAGGGTCAAGTTCAGTACTTGTGAATGGAAAGGTTCATGAATTCCTTGTGGGGAAGGAAATGAATGTTAAATACAGTATTGAGGTTCGTACCAAGATAGAGGAGGTTGTCTCTAGGTTGAAATTGGAAGGATACAAACCTGATTTGTCTCAAGTCCTTTTGGATATTGAAGAGGAAAGCAAAGAGGACTCACTTATTCTACACAGCGAGAAGATGGCCCTTGCATTTGGACTAATAAACACAAGCAAGGGTTCTCCTATTCACATAGTGAAGAACTTAAGGATTTGTTGTGATTGCCATTCATTTATCAAGCTGGTTTCTGGAGTTTATAATTGTCGAATTGTTGTGAGAGACCAAAACCGTTTCCATCAATTTGAGAATGGTTCCTGTTCCTGCAAAGACTTCTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

566

Amino Acids

63.31

Weight (kDa)

6.08

Isoelectric Point (pI)

46.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR	PF01535	126 - 155	4.8e-07	PPR repeat
PPR_2	PF13041	154 - 191	7.6e-09	PPR repeat family
PPR	PF01535	157 - 187	1.2e-07	PPR repeat
PPR	PF01535	262 - 288	8.3e-06	PPR repeat
PPR_2	PF13041	262 - 304	1.4e-09	PPR repeat family
E_motif	PF20431	375 - 436	1.2e-17	E motif
DYW_deaminase	PF14432	474 - 566	6.7e-39	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0003083)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60740
fragaria_vesca	FvH4_3g31510 FvH4_3g31510 FvH4_3g31510 FvH4_3g31510 FvH4_3g31510 FvH4_3g31510 FvH4_3g31510 FvH4_3g31510 FvH4_3g31510
malus_domestica	MD03G1123900.v1.1 MD11G1140900.v1.1
prunus_persica	Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1 Prupe.6G106500_v2.0.a1
pyrus_communis	pycom11g11690
rosa_chinensis	RchiOBHm_Chr5g0058181
rosa_laevigata	RLG00000035201
rosa_multiflora	Rmu_co8117600.1_g000001 Rmu_sc0000367.1_g000039
rosa_roxburghii	Rroxscaffold_1G00022350 Rroxscaffold_1G00072570
rosa_rugosa	Rorug04G0431300 Rorug05G0312500 Rorug05G0312600
rosa_samantha	Rh5AG033200 Rh5AG380400 Rh5BG391600 Rh5CG035900 Rh5CG415600 Rh5DG028700
rosa_wichuraiana	Rw5G035820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1620
AatII	GACGTC	1 cut(s)	482
AccIII	TCCGGA	1 cut(s)	361
AciI	CCGC	2 cut(s)	1046, 1079
AclWI	GGATC	2 cut(s)	179, 697
AcoI	YGGCCR	1 cut(s)	154
AcsI	RAATTY	4 cut(s)	67, 292, 673, 1331
AcyI	GRCGYC	1 cut(s)	479
AdeI	CACNNNGTG	2 cut(s)	253, 1558
AfaI	GTAC	6 cut(s)	33, 218, 655, 971, 1308, 1381
AfeI	AGCGCT	2 cut(s)	834, 1111
AfiI	CCNNNNNNNGG	2 cut(s)	517, 1227
AflII	CTTAAG	1 cut(s)	1567
AgsI	TTSAA	9 cut(s)	15, 73, 166, 505, 673, 752, 953, 1411, 1460
AjnI	CCWGG	1 cut(s)	1291
AjuI	GAANNNNNNNTTGG	2 cut(s)	509, 541
AluBI	AGCT	5 cut(s)	29, 226, 427, 695, 1603
AluI	AGCT	5 cut(s)	29, 226, 427, 695, 1603
Alw26I	GTCTC	4 cut(s)	270, 1405, 1443, 1635
AlwI	GGATC	2 cut(s)	179, 697
Aor13HI	TCCGGA	1 cut(s)	361
Aor51HI	AGCGCT	2 cut(s)	834, 1111
AoxI	GGCC	5 cut(s)	154, 563, 802, 817, 1506
ApeKI	GCWGC	2 cut(s)	114, 1151
ApoI	RAATTY	4 cut(s)	67, 292, 673, 1331
ArsI	GACNNNNNNTTYG	2 cut(s)	599, 631
AspA2I	CCTAGG	1 cut(s)	820
AspLEI	GCGC	2 cut(s)	835, 1112
AspS9I	GGNCC	1 cut(s)	1507
AsuC2I	CCSGG	1 cut(s)	575
AsuHPI	GGTGA	1 cut(s)	500
AsuII	TTCGAA	1 cut(s)	1282
AvrII	CCTAGG	1 cut(s)	820
BaeGI	GKGCMC	1 cut(s)	1035
BalI	TGGCCA	1 cut(s)	156
BauI	CACGAG	1 cut(s)	339
BbvCI	CCTCAGC	1 cut(s)	432
BbvI	GCAGC	2 cut(s)	126, 1138
BccI	CCATC	4 cut(s)	392, 1227, 1498, 1665
BciT130I	CCWGG	1 cut(s)	1293
BciVI	GTATCC	1 cut(s)	1415
BcnI	CCSGG	1 cut(s)	575
BcoDI	GTCTC	4 cut(s)	270, 1405, 1443, 1635
BfaI	CTAG	3 cut(s)	821, 926, 1404
BfmI	CTRYAG	1 cut(s)	1086
BfoI	RGCGCY	2 cut(s)	836, 1113
BfrI	CTTAAG	1 cut(s)	1567
BfuI	GTATCC	1 cut(s)	1415
BglI	GCCNNNNNGGC	1 cut(s)	1160
BisI	GCNGC	2 cut(s)	115, 1152
BlnI	CCTAGG	1 cut(s)	820
BlsI	GCNGC	2 cut(s)	116, 1153
BmcAI	AGTACT	1 cut(s)	1308
Bme1390I	CCNGG	2 cut(s)	575, 1293
BmgT120I	GGNCC	1 cut(s)	1507
BmiI	GGNNCC	2 cut(s)	1176, 1675
BmrFI	CCNGG	2 cut(s)	575, 1293
BmsI	GCATC	4 cut(s)	463, 559, 992, 1072
BplI	GAGNNNNNCTC	2 cut(s)	1385, 1417
BpmI	CTGGAG	2 cut(s)	1161, 1632
Bpu10I	CCTNAGC	1 cut(s)	432
Bpu14I	TTCGAA	1 cut(s)	1282
BpuEI	CTTGAG	3 cut(s)	1142, 1171, 1425
BpuMI	CCSGG	1 cut(s)	575
BsaHI	GRCGYC	1 cut(s)	479
BsaI	GGTCTC	2 cut(s)	270, 1635
BsaJI	CCNNGG	4 cut(s)	573, 820, 916, 1292
BsaWI	WCCGGW	1 cut(s)	361
BsaXI	ACNNNNNCTCC	4 cut(s)	317, 347, 912, 942
Bsc4I	CCNNNNNNNGG	2 cut(s)	517, 1227
Bse1I	ACTGG	2 cut(s)	310, 788
Bse3DI	GCAATG	5 cut(s)	98, 396, 600, 756, 1255
BseAI	TCCGGA	1 cut(s)	361
BseBI	CCWGG	1 cut(s)	1293
BseDI	CCNNGG	4 cut(s)	573, 820, 916, 1292
BseGI	GGATG	5 cut(s)	219, 236, 1007, 1087, 1243
BseLI	CCNNNNNNNGG	2 cut(s)	517, 1227
BseMI	GCAATG	5 cut(s)	98, 396, 600, 756, 1255
BseMII	CTCAG	4 cut(s)	284, 423, 609, 1120
BseNI	ACTGG	2 cut(s)	310, 788
BseRI	GAGGAG	5 cut(s)	149, 449, 1055, 1193, 1406
BseSI	GKGCMC	1 cut(s)	1035
BseXI	GCAGC	2 cut(s)	126, 1138
BseYI	CCCAGC	1 cut(s)	226
BsgI	GTGCAG	1 cut(s)	133
BshFI	GGCC	5 cut(s)	156, 565, 804, 819, 1508
BsiSI	CCGG	2 cut(s)	362, 575
BslFI	GGGAC	2 cut(s)	383, 794
BslI	CCNNNNNNNGG	2 cut(s)	517, 1227
BsmAI	GTCTC	4 cut(s)	270, 1405, 1443, 1635
BsmFI	GGGAC	2 cut(s)	383, 794
BsmI	GAATGC	2 cut(s)	558, 739
BsnI	GGCC	5 cut(s)	156, 565, 804, 819, 1508
Bso31I	GGTCTC	2 cut(s)	270, 1635
Bsp119I	TTCGAA	1 cut(s)	1282
Bsp1286I	GDGCHC	1 cut(s)	1035
Bsp13I	TCCGGA	1 cut(s)	361
Bsp143I	GATC	5 cut(s)	184, 689, 795, 882, 1012
Bsp19I	CCATGG	1 cut(s)	916
BspACI	CCGC	2 cut(s)	1046, 1079
BspANI	GGCC	5 cut(s)	156, 565, 804, 819, 1508
BspCNI	CTCAG	4 cut(s)	283, 424, 608, 1119
BspEI	TCCGGA	1 cut(s)	361
BspHI	TCATGA	2 cut(s)	826, 1327
BspLI	GGNNCC	2 cut(s)	1176, 1675
BspPI	GGATC	2 cut(s)	179, 697
BspT104I	TTCGAA	1 cut(s)	1282
BspTI	CTTAAG	1 cut(s)	1567
BspTNI	GGTCTC	2 cut(s)	270, 1635
BsrDI	GCAATG	5 cut(s)	98, 396, 600, 756, 1255
BsrI	ACTGG	2 cut(s)	310, 788
BssECI	CCNNGG	4 cut(s)	573, 820, 916, 1292
BssMI	GATC	5 cut(s)	184, 689, 795, 882, 1012
BssNI	GRCGYC	1 cut(s)	479
BssSI	CACGAG	1 cut(s)	339
BssT1I	CCWWGG	2 cut(s)	820, 916
Bst2BI	CACGAG	1 cut(s)	339
Bst2UI	CCWGG	1 cut(s)	1293
Bst4CI	ACNGT	4 cut(s)	512, 947, 1367, 1652
Bst6I	CTCTTC	4 cut(s)	41, 61, 404, 1455
BstACI	GRCGYC	1 cut(s)	479
BstAFI	CTTAAG	1 cut(s)	1567
BstBI	TTCGAA	1 cut(s)	1282
BstC8I	GCNNGC	6 cut(s)	46, 50, 112, 429, 642, 1114
BstDEI	CTNAG	6 cut(s)	270, 432, 595, 892, 984, 1106
BstDSI	CCRYGG	1 cut(s)	916
BstF5I	GGATG	5 cut(s)	219, 236, 1007, 1087, 1243
BstH2I	RGCGCY	2 cut(s)	836, 1113
BstHHI	GCGC	2 cut(s)	835, 1112
BstKTI	GATC	5 cut(s)	187, 692, 798, 885, 1015
BstMAI	GTCTC	4 cut(s)	270, 1405, 1443, 1635
BstMBI	GATC	5 cut(s)	184, 689, 795, 882, 1012
BstMWI	GCNNNNNNNGC	2 cut(s)	1133, 1160
BstNI	CCWGG	1 cut(s)	1293
BstNSI	RCATGY	2 cut(s)	52, 644
BstSCI	CCNGG	2 cut(s)	573, 1291
BstSFI	CTRYAG	1 cut(s)	1086
BstSLI	GKGCMC	1 cut(s)	1035
BstV1I	GCAGC	2 cut(s)	126, 1138
BsuI	GTATCC	1 cut(s)	1415
BsuRI	GGCC	5 cut(s)	156, 565, 804, 819, 1508
BtgI	CCRYGG	1 cut(s)	916
BtsCI	GGATG	5 cut(s)	219, 236, 1007, 1087, 1243
BtsIMutI	CAGTG	1 cut(s)	296
Cac8I	GCNNGC	6 cut(s)	46, 50, 112, 429, 642, 1114
CciI	TCATGA	2 cut(s)	826, 1327
CfoI	GCGC	2 cut(s)	835, 1112
Cfr13I	GGNCC	1 cut(s)	1507
Csp6I	GTAC	6 cut(s)	32, 217, 654, 970, 1307, 1380
CviQI	GTAC	6 cut(s)	32, 217, 654, 970, 1307, 1380
DdeI	CTNAG	6 cut(s)	270, 432, 595, 892, 984, 1106
DpnI	GATC	5 cut(s)	186, 691, 797, 884, 1014
DpnII	GATC	5 cut(s)	184, 689, 795, 882, 1012
DraIII	CACNNNGTG	2 cut(s)	253, 1558
EaeI	YGGCCR	1 cut(s)	154
Eam1104I	CTCTTC	4 cut(s)	41, 61, 404, 1455
EarI	CTCTTC	4 cut(s)	41, 61, 404, 1455
EciI	GGCGGA	1 cut(s)	1094
Eco130I	CCWWGG	2 cut(s)	820, 916
Eco31I	GGTCTC	2 cut(s)	270, 1635
Eco47III	AGCGCT	2 cut(s)	834, 1111
EcoRI	GAATTC	3 cut(s)	292, 673, 1331
EcoRII	CCWGG	1 cut(s)	1291
EcoT14I	CCWWGG	2 cut(s)	820, 916
EcoT22I	ATGCAT	4 cut(s)	205, 456, 816, 1007
ErhI	CCWWGG	2 cut(s)	820, 916
FaqI	GGGAC	2 cut(s)	383, 794
Fnu4HI	GCNGC	2 cut(s)	115, 1152
FokI	GGATG	5 cut(s)	226, 243, 1014, 1094, 1250
Fsp4HI	GCNGC	2 cut(s)	115, 1152
FspBI	CTAG	3 cut(s)	821, 926, 1404
GlaI	GCGC	2 cut(s)	834, 1111
GluI	GCNGC	2 cut(s)	115, 1152
GsaI	CCCAGC	1 cut(s)	230
GsuI	CTGGAG	2 cut(s)	1161, 1632
HaeII	RGCGCY	2 cut(s)	836, 1113
HaeIII	GGCC	5 cut(s)	156, 565, 804, 819, 1508
HapII	CCGG	2 cut(s)	362, 575
HhaI	GCGC	2 cut(s)	835, 1112
Hin1I	GRCGYC	1 cut(s)	479
Hin6I	GCGC	2 cut(s)	833, 1110
HinP1I	GCGC	2 cut(s)	833, 1110
HincII	GTYRAC	1 cut(s)	1051
HindII	GTYRAC	1 cut(s)	1051
HinfI	GANTC	8 cut(s)	358, 550, 988, 1120, 1184, 1210, 1288, 1478
HpaII	CCGG	2 cut(s)	362, 575
HphI	GGTGA	1 cut(s)	500
Hpy166II	GTNNAC	1 cut(s)	1051
Hpy188I	TCNGA	4 cut(s)	7, 223, 273, 516
Hpy188III	TCNNGA	6 cut(s)	362, 827, 1178, 1207, 1328, 1611
Hpy8I	GTNNAC	1 cut(s)	1051
HpyAV	CCTTC	6 cut(s)	511, 620, 929, 1090, 1339, 1412
HpyCH4III	ACNGT	4 cut(s)	512, 947, 1367, 1652
HpyCH4IV	ACGT	3 cut(s)	124, 479, 1053
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1133, 1160
HpyF3I	CTNAG	6 cut(s)	270, 432, 595, 892, 984, 1106
HpySE526I	ACGT	3 cut(s)	124, 479, 1053
Hsp92I	GRCGYC	1 cut(s)	479
HspAI	GCGC	2 cut(s)	833, 1110
Kpn2I	TCCGGA	1 cut(s)	361
Kzo9I	GATC	5 cut(s)	184, 689, 795, 882, 1012
LmnI	GCTCC	2 cut(s)	96, 1180
Lsp1109I	GCAGC	2 cut(s)	126, 1138
LweI	GCATC	4 cut(s)	463, 559, 992, 1072
MaeI	CTAG	3 cut(s)	821, 926, 1404
MaeII	ACGT	3 cut(s)	124, 479, 1053
MaeIII	GTNAC	4 cut(s)	120, 469, 911, 1193
MalI	GATC	5 cut(s)	186, 691, 797, 884, 1014
MboI	GATC	5 cut(s)	184, 689, 795, 882, 1012
MboII	GAAGA	6 cut(s)	28, 48, 421, 1472, 1513, 1573
MfeI	CAATTG	1 cut(s)	1137
MhlI	GDGCHC	1 cut(s)	1035
MlsI	TGGCCA	1 cut(s)	156
MluNI	TGGCCA	1 cut(s)	156
MlyI	GAGTC	3 cut(s)	559, 1178, 1472
MmeI	TCCRAC	1 cut(s)	44
Mox20I	TGGCCA	1 cut(s)	156
Mph1103I	ATGCAT	4 cut(s)	205, 456, 816, 1007
MroI	TCCGGA	1 cut(s)	361
MscI	TGGCCA	1 cut(s)	156
MseI	TTAA	3 cut(s)	351, 1359, 1568
MslI	CAYNNNNRTG	3 cut(s)	462, 857, 1128
Msp20I	TGGCCA	1 cut(s)	156
MspCI	CTTAAG	1 cut(s)	1567
MspI	CCGG	2 cut(s)	362, 575
MspR9I	CCNGG	2 cut(s)	575, 1293
MunI	CAATTG	1 cut(s)	1137
Mva1269I	GAATGC	2 cut(s)	558, 739
MvaI	CCWGG	1 cut(s)	1293
MwoI	GCNNNNNNNGC	2 cut(s)	1133, 1160
NciI	CCSGG	1 cut(s)	575
NcoI	CCATGG	1 cut(s)	916
NdeII	GATC	5 cut(s)	184, 689, 795, 882, 1012
NlaIV	GGNNCC	2 cut(s)	1176, 1675
NmuCI	GTSAC	1 cut(s)	120
NsiI	ATGCAT	4 cut(s)	205, 456, 816, 1007
NspI	RCATGY	2 cut(s)	52, 644
NspV	TTCGAA	1 cut(s)	1282
PaeI	GCATGC	2 cut(s)	52, 644
PagI	TCATGA	2 cut(s)	826, 1327
PctI	GAATGC	2 cut(s)	558, 739
PfeI	GAWTC	5 cut(s)	358, 988, 1120, 1210, 1288
PkrI	GCNGC	2 cut(s)	116, 1153
PleI	GAGTC	3 cut(s)	558, 1178, 1472
PpsI	GAGTC	3 cut(s)	558, 1178, 1472
PsiI	TTATAA	1 cut(s)	1620
Psp6I	CCWGG	1 cut(s)	1291
PspFI	CCCAGC	1 cut(s)	226
PspGI	CCWGG	1 cut(s)	1291
PspN4I	GGNNCC	2 cut(s)	1176, 1675
PspPI	GGNCC	1 cut(s)	1507
RsaI	GTAC	6 cut(s)	33, 218, 655, 971, 1308, 1381
RsaNI	GTAC	6 cut(s)	32, 217, 654, 970, 1307, 1380
RseI	CAYNNNNRTG	3 cut(s)	462, 857, 1128
SaqAI	TTAA	3 cut(s)	351, 1359, 1568
SatI	GCNGC	2 cut(s)	115, 1152
Sau3AI	GATC	5 cut(s)	184, 689, 795, 882, 1012
Sau96I	GGNCC	1 cut(s)	1507
ScaI	AGTACT	1 cut(s)	1308
SchI	GAGTC	3 cut(s)	559, 1178, 1472
ScrFI	CCNGG	2 cut(s)	575, 1293
SduI	GDGCHC	1 cut(s)	1035
SfaNI	GCATC	4 cut(s)	463, 559, 992, 1072
SfcI	CTRYAG	1 cut(s)	1086
SfuI	TTCGAA	1 cut(s)	1282
SmiMI	CAYNNNNRTG	3 cut(s)	462, 857, 1128
SmlI	CTYRAG	4 cut(s)	1157, 1186, 1440, 1567
SmoI	CTYRAG	4 cut(s)	1157, 1186, 1440, 1567
SphI	GCATGC	2 cut(s)	52, 644
SsiI	CCGC	2 cut(s)	1046, 1079
SspMI	CTAG	3 cut(s)	821, 926, 1404
StyD4I	CCNGG	2 cut(s)	573, 1291
StyI	CCWWGG	2 cut(s)	820, 916
TaaI	ACNGT	4 cut(s)	512, 947, 1367, 1652
TaiI	ACGT	3 cut(s)	127, 482, 1056
TaqI	TCGA	5 cut(s)	81, 183, 1208, 1282, 1627
TatI	WGTACW	3 cut(s)	31, 216, 1306
TfiI	GAWTC	5 cut(s)	358, 988, 1120, 1210, 1288
Tru1I	TTAA	3 cut(s)	351, 1359, 1568
Tru9I	TTAA	3 cut(s)	351, 1359, 1568
TscAI	CASTG	1 cut(s)	303
TseFI	GTSAC	1 cut(s)	120
TseI	GCWGC	2 cut(s)	114, 1151
Tsp45I	GTSAC	1 cut(s)	120
TspGWI	ACGGA	3 cut(s)	38, 177, 987
TspRI	CASTG	1 cut(s)	303
Vha464I	CTTAAG	1 cut(s)	1567
XapI	RAATTY	4 cut(s)	67, 292, 673, 1331
XceI	RCATGY	2 cut(s)	52, 644
XcmI	CCANNNNNNNNNTGG	1 cut(s)	607
XmaJI	CCTAGG	1 cut(s)	820
XspI	CTAG	3 cut(s)	821, 926, 1404
ZraI	GACGTC	1 cut(s)	480
ZrmI	AGTACT	1 cut(s)	1308
Zsp2I	ATGCAT	4 cut(s)	205, 456, 816, 1007

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.