Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0003027

Physical Location & Seq

Genomic Coordinates Reverse (-)

19672043 .. 19675294

Gene Structure 3252 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1162400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1830 bp

ATGAAAGCTTTAGGCGGGGGGTGCCACAGCCTGTGGGATATTTCTTATATATTCACCGAGTCGCTCACGCTCATCAATTCAGGAAGAAGGCGAGTCCAGGGTATGGCAGTGGACACCAATTTCGCATCCTCATTGTTCGATAACCTAAAGCTGGACGATCCATGGCTTCCTCCAACTAATTGGGAATCGATCCCATCCGAAACCGGAAATTCCCACCTTCTAAACCCCAACTCCTCTTCCTCTCAGTCTCTCTACAATGCCTCCGTCGTCTCCGCAAGTTTGGTGCGGTTGGCTATGAATGCACTGCAAGGAGTCGAATCGGCCCTTGTTAGTATCCGGAAGCTTTCTGCTGCATTTTTCTCCGACCCGGCGGATCGGACCTTCCATCAGATTCCACGTCTGTGGAATAGGTCCTCTAGCACCCATGCTCTGGGAAGCATTCTCCAACCCATTGGCAGCTCAGGTTTGCGAGTCTTTCTCCTCCGAAAATTTGTGGATTTCTTTACGAATTTGAATGCGGAAAGTCAAGGTCATCTTGCTGGTGAAGCTCAAGTGGAGCAGTGCCCTCCCTATAGTCTTGTTAACCATGCTTTCGCCGTTTCCGTGGAAAAGGTTGTGGAAGGGTACATGTGTGCACTGGATACATTGTATGCATCAGTGGGTTTGAGGCGCTCTTCACGTTCTTCTTCTGCGGTGGGATGTATGAACAGTGTAGTGTATTCTGAACTTACTTTGTTGGAGTTGTATTTGCATACGAAAGAATTAAGGACTCAGATTGAGGCCCTTACGAACTTATGCAACTTATGTCAGTTCTCTAGTTGCTTATCAGTATCTTCTTTGGAAGAATTGGTTTCAAATGCAAATTTTGAATTTTCTAAGTTCTATAGAGGAGGGGATTTGCTCACATATCTGTATACTCAATTACAGGTTTCTGATCCTGCTCACCGTCCTCTACTCAAATTCATTTTTCTCCGTACATTTGAGCCATATTGTGGGTTTATTAGATCATGGGTATTCAAAGCTGAGATTAGTGATCCTTACATGGAGTTTGTGGTAGAATATGTTGACAGTATGTCTCAAAATCAATGTGGTAAAGCCGGAAACCCTATTGACTTCCCATTGGCAACTATTAAGGAACGAGATGGAGTTGCTGTTCCTTGTTTTTTGAAGGACTTCTTGATTCCACTTGTCCGAGCTGGTCAGCAACTGCAAGTTCTGGTGAAATTGCTTGAATTGTGTACTTTTGTTGCCACCAAAGACCATACTTATGAGGGGTTTCTTCCCTGCTGGAGTGGGTTTTCGGGCAATTGTCCATGGTATGCATCTCTGTTGACATTCAGCAAAGGAAGTATAGAGGCCAGGATACTTTCGAGGGACAGTTATTACAAAAAGATGCAGGAAAAACTTGAGAATCTTTCGGCGAAATTAGAATTCAGATATCAACAGGTAGTTCCGCAAGGCAGACTGCCCGTTCGCTTGGATAATAATGGAAGGAGTTCCACCATCCCATTTCTATTCACATTGGATGACAATGTTGATAGTTTTATTGCTTCTCCAACAGATGATGAAAGGGAGTCACATGTGGCAGTTCATGATTTGGATTCTGATGAATTAAGTGAAAGGGATGGTCTATCTGACCTGGTGGATACATACGATTCATCTGAATGTTCAACCTCCTGTTATTCTGAAGAGCAAAATGTGCCAGAGCAAATGATTGGGCTTCCTAATCATATCATTGAGTTGGAGCAAAAATATTTATCTACTTTAAGCTTTTCAATGAGTAGTCCAGTTGAAAATTTGCAAAATCCTCATGTATGTGAAGATTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0000278 GO:0000280 GO:0000923 GO:0000930 GO:0000931 GO:0003674 GO:0005198 GO:0005200 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005813 GO:0005815 GO:0005816 GO:0005822 GO:0005825 GO:0005829 GO:0005856 GO:0006810 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007020 GO:0007049 GO:0007051 GO:0007052 GO:0007097 GO:0007098 GO:0007163 GO:0008017 GO:0008092 GO:0008150 GO:0008274 GO:0008275 GO:0008360 GO:0009987 GO:0015630 GO:0015631 GO:0016043 GO:0022402 GO:0022414 GO:0022603 GO:0022604 GO:0022607 GO:0031021 GO:0031023 GO:0031109 GO:0031122 GO:0032153 GO:0032155 GO:0032991 GO:0034453 GO:0034622 GO:0034631 GO:0043015 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044450 GO:0044464 GO:0044732 GO:0046785 GO:0046907 GO:0048285 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051179 GO:0051225 GO:0051234 GO:0051258 GO:0051298 GO:0051321 GO:0051415 GO:0051418 GO:0051640 GO:0051641 GO:0051647 GO:0051649 GO:0051656 GO:0061496 GO:0061497 GO:0065003 GO:0065007 GO:0065008 GO:0070925 GO:0071840 GO:0071957 GO:0071963 GO:0072393 GO:0090307 GO:0097435 GO:0098863 GO:0099098 GO:0099111 GO:0140014 GO:1902850 GO:1903047 GO:1990734

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Spc97_Spc98

Protein Analysis

610

Amino Acids

68.08

Weight (kDa)

5.02

Isoelectric Point (pI)

49.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GCP_N_terminal	PF17681	99 - 406	8.9e-22	Gamma tubulin complex component N-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003027)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G43610 AT3G43610 AT3G43610
fragaria_vesca	FvH4_3g27030 FvH4_3g27031 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990
malus_domestica	MD03G1162300.v1.1 MD03G1162400.v1.1 MD11G1178600.v1.1
prunus_persica	Prupe.6G151400_v2.0.a1 Prupe.6G151400_v2.0.a1 Prupe.6G151400_v2.0.a1
pyrus_communis	pycom11g15400
rosa_chinensis	RchiOBHm_Chr5g0049541
rosa_laevigata	RLG00000034625
rosa_multiflora	Rmu_co8383485.1_g000001 Rmu_sc0013032.1_g000004
rosa_roxburghii	Rroxscaffold_1G00032160
rosa_rugosa	Rorug05G0248900 Rorug05G0249000
rosa_samantha	Rh5AG325500 Rh5BG336700 Rh5CG361500 Rh5DG348800
rosa_wichuraiana	Rw5G030750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	21
AccB7I	CCANNNNNTGG	3 cut(s)	103, 430, 992
AccI	GTMKAC	1 cut(s)	914
AccIII	TCCGGA	1 cut(s)	336
AciI	CCGC	7 cut(s)	15, 273, 286, 371, 518, 692, 1454
AclWI	GGATC	5 cut(s)	152, 184, 381, 929, 1028
AcsI	RAATTY	8 cut(s)	208, 488, 508, 862, 869, 959, 1430, 1795
AcuI	CTGAAG	1 cut(s)	1707
AfaI	GTAC	3 cut(s)	626, 976, 1240
AfiI	CCNNNNNNNGG	4 cut(s)	103, 151, 430, 992
AflIII	ACRYGT	2 cut(s)	627, 1579
AgsI	TTSAA	9 cut(s)	514, 855, 869, 1018, 1168, 1232, 1671, 1776, 1793
AhdI	GACNNNNNGTC	1 cut(s)	1072
AjiI	CACGTC	1 cut(s)	398
AjnI	CCWGG	3 cut(s)	96, 1358, 1638
AleI	CACNNNNGTG	1 cut(s)	400
AloI	GAACNNNNNNTCC	2 cut(s)	1137, 1169
AluBI	AGCT	8 cut(s)	8, 151, 343, 459, 548, 1022, 1196, 1770
AluI	AGCT	8 cut(s)	8, 151, 343, 459, 548, 1022, 1196, 1770
Alw21I	GWGCWC	1 cut(s)	637
Alw26I	GTCTC	3 cut(s)	252, 274, 1080
Alw44I	GTGCAC	1 cut(s)	633
AlwI	GGATC	5 cut(s)	152, 184, 381, 929, 1028
AlwNI	CAGNNNCTG	1 cut(s)	1207
Aor13HI	TCCGGA	1 cut(s)	336
AoxI	GGCC	3 cut(s)	321, 780, 1356
ApaLI	GTGCAC	1 cut(s)	633
ApeKI	GCWGC	2 cut(s)	350, 456
ApoI	RAATTY	8 cut(s)	208, 488, 508, 862, 869, 959, 1430, 1795
ArsI	GACNNNNNNTTYG	4 cut(s)	104, 136, 1455, 1487
Asp700I	GAANNNNTTC	2 cut(s)	1172, 1495
AspLEI	GCGC	1 cut(s)	672
AspS9I	GGNCC	4 cut(s)	322, 378, 411, 781
AsuC2I	CCSGG	1 cut(s)	368
AsuHPI	GGTGA	4 cut(s)	46, 554, 935, 1231
AvaII	GGWCC	2 cut(s)	378, 411
BaeGI	GKGCMC	2 cut(s)	566, 637
BaeI	ACNNNNGTAYC	2 cut(s)	616, 649
BanI	GGYRCC	1 cut(s)	21
Bbv12I	GWGCWC	1 cut(s)	637
BbvI	GCAGC	2 cut(s)	337, 468
BccI	CCATC	5 cut(s)	202, 393, 1136, 1511, 1619
BceAI	ACGGC	1 cut(s)	581
BciT130I	CCWGG	3 cut(s)	98, 1360, 1640
BciVI	GTATCC	4 cut(s)	344, 634, 1356, 1639
BcnI	CCSGG	1 cut(s)	368
BcoDI	GTCTC	3 cut(s)	252, 274, 1080
BfaI	CTAG	2 cut(s)	417, 816
BfmI	CTRYAG	2 cut(s)	571, 883
BfoI	RGCGCY	1 cut(s)	673
BfuI	GTATCC	4 cut(s)	344, 634, 1356, 1639
BisI	GCNGC	2 cut(s)	351, 457
BlsI	GCNGC	2 cut(s)	352, 458
Bme1390I	CCNGG	4 cut(s)	98, 368, 1360, 1640
Bme18I	GGWCC	2 cut(s)	378, 411
BmeRI	GACNNNNNGTC	1 cut(s)	1072
BmgBI	CACGTC	1 cut(s)	398
BmgT120I	GGNCC	4 cut(s)	322, 378, 411, 781
BmiI	GGNNCC	1 cut(s)	23
BmrFI	CCNGG	4 cut(s)	98, 368, 1360, 1640
BmsI	GCATC	4 cut(s)	134, 662, 1331, 1383
BplI	GAGNNNNNCTC	2 cut(s)	462, 494
BpmI	CTGGAG	1 cut(s)	1309
Bpu10I	CCTNAGC	1 cut(s)	460
BpuEI	CTTGAG	2 cut(s)	534, 1427
BpuMI	CCSGG	1 cut(s)	368
Bsa29I	ATCGAT	1 cut(s)	188
BsaJI	CCNNGG	4 cut(s)	97, 161, 603, 1313
BsaWI	WCCGGW	2 cut(s)	203, 336
BsaXI	ACNNNNNCTCC	6 cut(s)	215, 245, 245, 275, 1137, 1167
Bsc4I	CCNNNNNNNGG	4 cut(s)	103, 151, 430, 992
Bse1I	ACTGG	2 cut(s)	642, 1787
BseAI	TCCGGA	1 cut(s)	336
BseBI	CCWGG	3 cut(s)	98, 1360, 1640
BseCI	ATCGAT	1 cut(s)	188
BseDI	CCNNGG	4 cut(s)	97, 161, 603, 1313
BseGI	GGATG	6 cut(s)	125, 194, 704, 1503, 1531, 1630
BseLI	CCNNNNNNNGG	4 cut(s)	103, 151, 430, 992
BseMII	CTCAG	4 cut(s)	257, 474, 785, 1014
BseNI	ACTGG	2 cut(s)	642, 1787
BseRI	GAGGAG	3 cut(s)	223, 470, 903
BseSI	GKGCMC	2 cut(s)	566, 637
BseXI	GCAGC	2 cut(s)	337, 468
BshFI	GGCC	3 cut(s)	323, 782, 1358
BshNI	GGYRCC	1 cut(s)	21
BshVI	ATCGAT	1 cut(s)	188
BsiHKAI	GWGCWC	1 cut(s)	637
BsiSI	CCGG	4 cut(s)	204, 337, 368, 1098
BslFI	GGGAC	1 cut(s)	1388
BslI	CCNNNNNNNGG	4 cut(s)	103, 151, 430, 992
BsmAI	GTCTC	3 cut(s)	252, 274, 1080
BsmBI	CGTCTC	1 cut(s)	274
BsmFI	GGGAC	1 cut(s)	1388
BsmI	GAATGC	3 cut(s)	304, 438, 520
BsnI	GGCC	3 cut(s)	323, 782, 1358
Bsp1286I	GDGCHC	2 cut(s)	566, 637
Bsp13I	TCCGGA	1 cut(s)	336
Bsp143I	GATC	6 cut(s)	157, 189, 373, 934, 1004, 1033
Bsp19I	CCATGG	2 cut(s)	161, 1313
BspACI	CCGC	7 cut(s)	15, 273, 286, 371, 518, 692, 1454
BspANI	GGCC	3 cut(s)	323, 782, 1358
BspCNI	CTCAG	4 cut(s)	256, 473, 784, 1015
BspDI	ATCGAT	1 cut(s)	188
BspEI	TCCGGA	1 cut(s)	336
BspHI	TCATGA	1 cut(s)	1591
BspLI	GGNNCC	1 cut(s)	23
BspPI	GGATC	5 cut(s)	152, 184, 381, 929, 1028
BspQI	GCTCTTC	2 cut(s)	679, 1683
BspT107I	GGYRCC	1 cut(s)	21
BsrI	ACTGG	2 cut(s)	642, 1787
BssECI	CCNNGG	4 cut(s)	97, 161, 603, 1313
BssMI	GATC	6 cut(s)	157, 189, 373, 934, 1004, 1033
BssNAI	GTATAC	1 cut(s)	915
BssT1I	CCWWGG	2 cut(s)	161, 1313
Bst1107I	GTATAC	1 cut(s)	915
Bst2UI	CCWGG	3 cut(s)	98, 1360, 1640
Bst4CI	ACNGT	4 cut(s)	710, 947, 1070, 1379
Bst6I	CTCTTC	3 cut(s)	241, 679, 1683
BstAPI	GCANNNNNTGC	1 cut(s)	1699
BstDEI	CTNAG	5 cut(s)	243, 460, 771, 876, 1023
BstDSI	CCRYGG	3 cut(s)	161, 603, 1313
BstF5I	GGATG	6 cut(s)	125, 194, 704, 1503, 1531, 1630
BstH2I	RGCGCY	1 cut(s)	673
BstHHI	GCGC	1 cut(s)	672
BstKTI	GATC	6 cut(s)	160, 192, 376, 937, 1007, 1036
BstMAI	GTCTC	3 cut(s)	252, 274, 1080
BstMBI	GATC	6 cut(s)	157, 189, 373, 934, 1004, 1033
BstMWI	GCNNNNNNNGC	4 cut(s)	21, 299, 545, 1699
BstNI	CCWGG	3 cut(s)	98, 1360, 1640
BstNSI	RCATGY	2 cut(s)	631, 1583
BstSCI	CCNGG	4 cut(s)	96, 366, 1358, 1638
BstSFI	CTRYAG	2 cut(s)	571, 883
BstSLI	GKGCMC	2 cut(s)	566, 637
BstV1I	GCAGC	2 cut(s)	337, 468
BstXI	CCANNNNNNTGG	3 cut(s)	180, 402, 452
BstZ17I	GTATAC	1 cut(s)	915
Bsu15I	ATCGAT	1 cut(s)	188
BsuI	GTATCC	4 cut(s)	344, 634, 1356, 1639
BsuRI	GGCC	3 cut(s)	323, 782, 1358
BsuTUI	ATCGAT	1 cut(s)	188
BtgI	CCRYGG	3 cut(s)	161, 603, 1313
BtrI	CACGTC	1 cut(s)	398
BtsCI	GGATG	6 cut(s)	125, 194, 704, 1503, 1531, 1630
BtsI	GCAGTG	3 cut(s)	114, 302, 566
BtsIMutI	CAGTG	6 cut(s)	114, 302, 566, 635, 663, 715
CaiI	CAGNNNCTG	1 cut(s)	1207
CciI	TCATGA	1 cut(s)	1591
CfoI	GCGC	1 cut(s)	672
Cfr13I	GGNCC	4 cut(s)	322, 378, 411, 781
ClaI	ATCGAT	1 cut(s)	188
CsiI	ACCWGGT	1 cut(s)	1638
Csp6I	GTAC	3 cut(s)	625, 975, 1239
CviQI	GTAC	3 cut(s)	625, 975, 1239
DdeI	CTNAG	5 cut(s)	243, 460, 771, 876, 1023
DpnI	GATC	6 cut(s)	159, 191, 375, 936, 1006, 1035
DpnII	GATC	6 cut(s)	157, 189, 373, 934, 1004, 1033
DriI	GACNNNNNGTC	1 cut(s)	1072
Eam1104I	CTCTTC	3 cut(s)	241, 679, 1683
Eam1105I	GACNNNNNGTC	1 cut(s)	1072
EarI	CTCTTC	3 cut(s)	241, 679, 1683
EciI	GGCGGA	1 cut(s)	386
Eco130I	CCWWGG	2 cut(s)	161, 1313
Eco32I	GATATC	1 cut(s)	1439
Eco47I	GGWCC	2 cut(s)	378, 411
Eco57I	CTGAAG	1 cut(s)	1707
EcoO109I	RGGNCCY	2 cut(s)	411, 781
EcoRI	GAATTC	1 cut(s)	1430
EcoRII	CCWGG	3 cut(s)	96, 1358, 1638
EcoRV	GATATC	1 cut(s)	1439
EcoT14I	CCWWGG	2 cut(s)	161, 1313
EcoT22I	ATGCAT	2 cut(s)	655, 1324
ErhI	CCWWGG	2 cut(s)	161, 1313
Esp3I	CGTCTC	1 cut(s)	274
FalI	AAGNNNNNCTT	4 cut(s)	519, 551, 1160, 1192
FaqI	GGGAC	1 cut(s)	1388
FauI	CCCGC	1 cut(s)	8
FblI	GTMKAC	1 cut(s)	914
Fnu4HI	GCNGC	2 cut(s)	351, 457
FokI	GGATG	6 cut(s)	112, 181, 711, 1490, 1538, 1637
Fsp4HI	GCNGC	2 cut(s)	351, 457
FspBI	CTAG	2 cut(s)	417, 816
GlaI	GCGC	1 cut(s)	671
GluI	GCNGC	2 cut(s)	351, 457
GsuI	CTGGAG	1 cut(s)	1309
HaeII	RGCGCY	1 cut(s)	673
HaeIII	GGCC	3 cut(s)	323, 782, 1358
HapII	CCGG	4 cut(s)	204, 337, 368, 1098
HhaI	GCGC	1 cut(s)	672
Hin6I	GCGC	1 cut(s)	670
HinP1I	GCGC	1 cut(s)	670
HincII	GTYRAC	3 cut(s)	583, 1066, 1332
HindII	GTYRAC	3 cut(s)	583, 1066, 1332
HindIII	AAGCTT	3 cut(s)	6, 341, 1768
HpaI	GTTAAC	1 cut(s)	583
HpaII	CCGG	4 cut(s)	204, 337, 368, 1098
HphI	GGTGA	4 cut(s)	46, 554, 935, 1231
Hpy166II	GTNNAC	7 cut(s)	112, 583, 635, 915, 1066, 1239, 1332
Hpy188III	TCNNGA	4 cut(s)	81, 337, 1177, 1592
Hpy8I	GTNNAC	7 cut(s)	112, 583, 635, 915, 1066, 1239, 1332
Hpy99I	CGWCG	1 cut(s)	269
HpyAV	CCTTC	6 cut(s)	81, 227, 391, 614, 1162, 1485
HpyCH4III	ACNGT	4 cut(s)	710, 947, 1070, 1379
HpyCH4IV	ACGT	2 cut(s)	397, 679
HpyF10VI	GCNNNNNNNGC	4 cut(s)	21, 299, 545, 1699
HpyF3I	CTNAG	5 cut(s)	243, 460, 771, 876, 1023
HpySE526I	ACGT	2 cut(s)	397, 679
HspAI	GCGC	1 cut(s)	670
Kpn2I	TCCGGA	1 cut(s)	336
KspAI	GTTAAC	1 cut(s)	583
Kzo9I	GATC	6 cut(s)	157, 189, 373, 934, 1004, 1033
LguI	GCTCTTC	2 cut(s)	679, 1683
LmnI	GCTCC	2 cut(s)	556, 1744
Lsp1109I	GCAGC	2 cut(s)	337, 468
LweI	GCATC	4 cut(s)	134, 662, 1331, 1383
MabI	ACCWGGT	1 cut(s)	1638
MaeI	CTAG	2 cut(s)	417, 816
MaeII	ACGT	2 cut(s)	397, 679
MaeIII	GTNAC	1 cut(s)	1575
MalI	GATC	6 cut(s)	159, 191, 375, 936, 1006, 1035
MboI	GATC	6 cut(s)	157, 189, 373, 934, 1004, 1033
MboII	GAAGA	9 cut(s)	96, 228, 666, 675, 678, 825, 854, 1271, 1700
MfeI	CAATTG	1 cut(s)	1306
MhlI	GDGCHC	2 cut(s)	566, 637
MlyI	GAGTC	6 cut(s)	68, 102, 321, 480, 763, 1583
MmeI	TCCRAC	6 cut(s)	197, 387, 469, 717, 1580, 1722
Mph1103I	ATGCAT	2 cut(s)	655, 1324
MroI	TCCGGA	1 cut(s)	336
MroXI	GAANNNNTTC	2 cut(s)	1172, 1495
MseI	TTAA	5 cut(s)	582, 764, 1131, 1613, 1766
MslI	CAYNNNNRTG	4 cut(s)	400, 1266, 1663, 1815
MspI	CCGG	4 cut(s)	204, 337, 368, 1098
MspR9I	CCNGG	4 cut(s)	98, 368, 1360, 1640
MunI	CAATTG	1 cut(s)	1306
Mva1269I	GAATGC	3 cut(s)	304, 438, 520
MvaI	CCWGG	3 cut(s)	98, 1360, 1640
MwoI	GCNNNNNNNGC	4 cut(s)	21, 299, 545, 1699
NciI	CCSGG	1 cut(s)	368
NcoI	CCATGG	2 cut(s)	161, 1313
NdeII	GATC	6 cut(s)	157, 189, 373, 934, 1004, 1033
NlaIV	GGNNCC	1 cut(s)	23
NmuCI	GTSAC	1 cut(s)	1575
NsiI	ATGCAT	2 cut(s)	655, 1324
NspI	RCATGY	2 cut(s)	631, 1583
OliI	CACNNNNGTG	1 cut(s)	400
PagI	TCATGA	1 cut(s)	1591
PciI	ACATGT	2 cut(s)	627, 1579
PciSI	GCTCTTC	2 cut(s)	679, 1683
PcsI	WCGNNNNNNNCGW	1 cut(s)	600
PctI	GAATGC	3 cut(s)	304, 438, 520
PdmI	GAANNNNTTC	2 cut(s)	1172, 1495
PfeI	GAWTC	7 cut(s)	185, 317, 391, 1180, 1411, 1601, 1655
PflMI	CCANNNNNTGG	3 cut(s)	103, 430, 992
PkrI	GCNGC	2 cut(s)	352, 458
PleI	GAGTC	6 cut(s)	67, 101, 320, 479, 763, 1582
PpsI	GAGTC	6 cut(s)	67, 101, 320, 479, 763, 1582
PpuMI	RGGWCCY	1 cut(s)	411
PscI	ACATGT	2 cut(s)	627, 1579
Psp5II	RGGWCCY	1 cut(s)	411
Psp6I	CCWGG	3 cut(s)	96, 1358, 1638
PspGI	CCWGG	3 cut(s)	96, 1358, 1638
PspN4I	GGNNCC	1 cut(s)	23
PspPI	GGNCC	4 cut(s)	322, 378, 411, 781
PspPPI	RGGWCCY	1 cut(s)	411
PstNI	CAGNNNCTG	1 cut(s)	1207
RsaI	GTAC	3 cut(s)	626, 976, 1240
RsaNI	GTAC	3 cut(s)	625, 975, 1239
RseI	CAYNNNNRTG	4 cut(s)	400, 1266, 1663, 1815
SapI	GCTCTTC	2 cut(s)	679, 1683
SaqAI	TTAA	5 cut(s)	582, 764, 1131, 1613, 1766
SatI	GCNGC	2 cut(s)	351, 457
Sau3AI	GATC	6 cut(s)	157, 189, 373, 934, 1004, 1033
Sau96I	GGNCC	4 cut(s)	322, 378, 411, 781
SchI	GAGTC	6 cut(s)	68, 102, 321, 480, 763, 1583
ScrFI	CCNGG	4 cut(s)	98, 368, 1360, 1640
SduI	GDGCHC	2 cut(s)	566, 637
SexAI	ACCWGGT	1 cut(s)	1638
SfaNI	GCATC	4 cut(s)	134, 662, 1331, 1383
SfcI	CTRYAG	2 cut(s)	571, 883
SinI	GGWCC	2 cut(s)	378, 411
SmiMI	CAYNNNNRTG	4 cut(s)	400, 1266, 1663, 1815
SmlI	CTYRAG	2 cut(s)	549, 1406
SmoI	CTYRAG	2 cut(s)	549, 1406
SsiI	CCGC	7 cut(s)	15, 273, 286, 371, 518, 692, 1454
SspI	AATATT	1 cut(s)	1754
SspMI	CTAG	2 cut(s)	417, 816
StyD4I	CCNGG	4 cut(s)	96, 366, 1358, 1638
StyI	CCWWGG	2 cut(s)	161, 1313
TaaI	ACNGT	4 cut(s)	710, 947, 1070, 1379
TaiI	ACGT	2 cut(s)	400, 682
TaqI	TCGA	4 cut(s)	138, 188, 315, 1370
TatI	WGTACW	1 cut(s)	1238
TfiI	GAWTC	7 cut(s)	185, 317, 391, 1180, 1411, 1601, 1655
Tru1I	TTAA	5 cut(s)	582, 764, 1131, 1613, 1766
Tru9I	TTAA	5 cut(s)	582, 764, 1131, 1613, 1766
TscAI	CASTG	6 cut(s)	114, 309, 566, 642, 663, 715
TseFI	GTSAC	1 cut(s)	1575
TseI	GCWGC	2 cut(s)	350, 456
Tsp45I	GTSAC	1 cut(s)	1575
TspDTI	ATGAA	8 cut(s)	17, 311, 719, 952, 1580, 1581, 1623, 1647
TspGWI	ACGGA	3 cut(s)	253, 592, 962
TspRI	CASTG	6 cut(s)	114, 309, 566, 642, 663, 715
Van91I	CCANNNNNTGG	3 cut(s)	103, 430, 992
VneI	GTGCAC	1 cut(s)	633
VpaK11BI	GGWCC	2 cut(s)	378, 411
XapI	RAATTY	8 cut(s)	208, 488, 508, 862, 869, 959, 1430, 1795
XceI	RCATGY	2 cut(s)	631, 1583
XmiI	GTMKAC	1 cut(s)	914
XmnI	GAANNNNTTC	2 cut(s)	1172, 1495
XspI	CTAG	2 cut(s)	417, 816
Zsp2I	ATGCAT	2 cut(s)	655, 1324

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.