Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0003027

Physical Location & Seq

Genomic Coordinates Reverse (-)

48977459 .. 48988497

Gene Structure 11039 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G030750.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2919 bp

ATGCAACTTATATCAATTTCTGATTGCTTCTCGGCGTCTTCTTTTGATGAGTTACTTACGAAAGCCAAAGCTGAGTTTTGTAAATTCTACAGAGGGGGTGATTTACTCACGTATCTGTATACTCAGTTACAGGTTGCTGATCCTGCTCATCGTCCTGTACTAAAATTTCTTTTTCTTCGTACATGTGAACCGTACTTCGGATTCATAAGATCATGGATATTCAAAGCTGAGATTAGCGATCCTTATGAGGAGTTTTTGGTTGAATATGTTCACTCTCCTAATCCATCTGTTGAAGCTGGTATCTCTATTGACTTCCCATTGGCAACTATTAGGGAACGAGATGGAGTTCCTGTTCCTTGTTTTTTGAAGGACTTCTTGATTCCACTTTTCAGAGCTGGTCAGCAGCTGCAAGTTCTAGCGAAATTGATTGAATTGTGTACTTTTGTTGCCCCTAAGAACCATACTCATGAGAGTTTTCTTCCCTGCTGGAGTGGGTTTTCAAGCAATTGTCCATCTTATGCATCTCCATTGACGTTCAGCAAAGGAAATATAGAGGCCATGGTACTTTCAAGGGAATGTTATTACAAAAGGATGCAGGACCAACTCCAGAATCTTTTGACGGAAATAGAGTTCAGATTTCAACAGGTAATTTCACAAGACACACTGCCTGTTCTCTTGGATAATAGTGGAAGGAGTTCAACCATCCCAGTTTTAGTCCCACTGGATGACAGTTTTATTGCTCCTTCAACAGATGATGAAAGGGAGTCAAATGTGGTGGCTGATGATTTGGATTCAGACGAGTTAAGTACAAGAGACAATGTATGCTACACTGCAGATGCATACGAGTCATCTGAATGTTCAAGCTCCACTATATCTGAAGAGCAAAATGTGTTCGAGCAGATGACTGAGTTCCCTAATCACATTGTAGGGGAAGAAGAAAAGTATTTATCTGCTTTAAGCTTCTCAATGAGTATTCCAGTTGATACTTTGCAAAAGCCCCATGGATCTGCAGATTCATGTCATATAGACAAGATTAGTAGAAGTTGTGAAAGAAAAGATGCCTTTGGGCATTCTCATTATAAAGGCATACTTACGAGTCAGATATTGGATGTTCAATTTTCAGATTGTCTCTCTGATAAGGATTGGCTGGAAAGAGATTATTTTGAGAATCCGTCTGTCATTGATATAGAGTACAAAGAAGGTCTGAAGTCACGTCCAACGGACTTTGCCTCAAAGGTGAATGAAAGAATAATGGGATCGTTAAAGGAAGGTTCATCATATTTTAGAAAAAGAATCATGGATAGTAATGCTTTAATAGAAGAAGCCTTTGGCAAGGTTGAACCTCAAAAGGCCAGTTATACTTCTGATACATTTGCATTACAACAGTGGAAGGTTAATTACCAAAACAATTTTCTCAGCATGAACCCAATGTTGACAAAAAATAATTTCCTTCACCTAACATCCAGGCCTGGAGAGAGATGCAAGACAGACCTTGGGGATTCTTTGGCTTACTTTGATTTCTCTCACATAAAAGATCCTTGTAAGGTGTTTCCGGTAAAGGTTCCTGTAGGGCTCATGGACTCTGGTGCCTCTACTACCAGTGTTAGGAGTGATCACCATCTGAAACAATGTTCTGCAGAAGCTGATGTTCTGATTGGAAGAACAATAGTATCTGACTCTCTTCCGTCTTCAGATTCGAAGGGCCACACCAAAGGAGATGCTACTTTAAAAAATGTTTCTGGTGGTAGTTGTTGGGAGAGTTTGCTTGGTAGATTTAGTGACACTGTCATTAATAGAGTTGAAGATCACAGAGAAAGCTTGGCGGCCACTTTTGACATACCACTTGATTTTATTATCGACACATGCCTTCTGCAGGAAATCATGCTCCAATATAAGTATGTCAGCAAGTTAACTATTAAGTTGCTTGAAGAAGGATTTGATTTGCAAGAACATTTGCTGGCTCTGCGACGGTACCACTTCATGGAATTAGCAGACTGGGCAGATTTGTTTATTATGTCCCTTTGGCATCATAAATGGAGTATTACACAGGCAGATCATAGACTTTCCGAAATTCAAAGTTTTCTTGAGTCATCAGTTCAGAGGTCATCATGTGAACGTGATTATAATAAGGACAGGTTATTTGTGTACCTGAAAGGACACGATGCAGTGCCTCTTTCAGCATCTGCTATTGGAGTCCATTCCTTCAACTTTCTAGGTTTGGGATATCGAGTGGATTGGCCCATCAGCATTGTTTTGACTCCTGGTGCATTGAAAATATATGCCGAGATATTCAGTTTCTTGATACAAGTGAAACTTGCTCTGTTTTCATTGACTGACGTGTGGTGCCAATTGAAGGATCTGGTCCAGTTGATTAGTCGGAATAACCACTCTGAGCAACATGAAAAGGAAGTGAGTCATTTCAATGCAATGGTGAAAATGAGGCATCAGGTCAATCACTTTGTATCTACATTACAGCAATATGTGGAGTCACAGCTATCACATGTATCATGGTGCAGGTTTCTATATTCACTTAAGCATAAGGTCAAAGATATGATGGATCTTCAGTCAGTGCACATGGCATATCTCTCAGATTCACTTCACATATGTTTCCTCTCTGATGAAACAAGACCTATAGCTTGCATCATTGAGAGCATTCTGCAGTGTGCTCTGGACTTCAGGTCTTGTCTCACTGGGGAAGTATGGAATGCAGGAACAGGTCAAGGGAATTTAATTGCAAGACACTCTGGAATCAATATATCCCAGGTTCTTTCCATAAAGCAAACGTTTGACAAAAATATGAAAGAATTGCACTTGTGTTACCTCAGATCACCTAAACATGGCGAGTTTGGACTCTCTCACTTCTGGGAATACCTGAACTACAACAAGTATTACTCAGATGCTGCTTCCAAAGCCCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0000278 GO:0000280 GO:0000923 GO:0000930 GO:0000931 GO:0003674 GO:0005198 GO:0005200 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005813 GO:0005815 GO:0005816 GO:0005822 GO:0005825 GO:0005829 GO:0005856 GO:0006810 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007020 GO:0007049 GO:0007051 GO:0007052 GO:0007097 GO:0007098 GO:0007163 GO:0008017 GO:0008092 GO:0008150 GO:0008274 GO:0008275 GO:0008360 GO:0009987 GO:0015630 GO:0015631 GO:0016043 GO:0022402 GO:0022414 GO:0022603 GO:0022604 GO:0022607 GO:0031021 GO:0031023 GO:0031109 GO:0031122 GO:0032153 GO:0032155 GO:0032991 GO:0034453 GO:0034622 GO:0034631 GO:0043015 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044450 GO:0044464 GO:0044732 GO:0046785 GO:0046907 GO:0048285 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051179 GO:0051225 GO:0051234 GO:0051258 GO:0051298 GO:0051321 GO:0051415 GO:0051418 GO:0051640 GO:0051641 GO:0051647 GO:0051649 GO:0051656 GO:0061496 GO:0061497 GO:0065003 GO:0065007 GO:0065008 GO:0070925 GO:0071840 GO:0071957 GO:0071963 GO:0072393 GO:0090307 GO:0097435 GO:0098863 GO:0099098 GO:0099111 GO:0140014 GO:1902850 GO:1903047 GO:1990734

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Spc97_Spc98

Protein Analysis

972

Amino Acids

110.75

Weight (kDa)

5.52

Isoelectric Point (pI)

47.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GCP_N_terminal	PF17681	28 - 153	2.2e-13	Gamma tubulin complex component N-terminal
GCP_C_terminal	PF04130	648 - 964	5.3e-62	Gamma tubulin complex component C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0003027)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G43610 AT3G43610 AT3G43610
fragaria_vesca	FvH4_3g27030 FvH4_3g27031 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990
malus_domestica	MD03G1162300.v1.1 MD03G1162400.v1.1 MD11G1178600.v1.1
prunus_persica	Prupe.6G151400_v2.0.a1 Prupe.6G151400_v2.0.a1 Prupe.6G151400_v2.0.a1
pyrus_communis	pycom11g15400
rosa_chinensis	RchiOBHm_Chr5g0049541
rosa_laevigata	RLG00000034625
rosa_multiflora	Rmu_co8383485.1_g000001 Rmu_sc0013032.1_g000004
rosa_roxburghii	Rroxscaffold_1G00032160
rosa_rugosa	Rorug05G0248900 Rorug05G0249000
rosa_samantha	Rh5AG325500 Rh5BG336700 Rh5CG361500 Rh5DG348800
rosa_wichuraiana	Rw5G030750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1080, 2124
Acc36I	ACCTGC	1 cut(s)	2505
Acc65I	GGTACC	1 cut(s)	1971
AccB1I	GGYRCC	3 cut(s)	1586, 1971, 2343
AccB7I	CCANNNNNTGG	1 cut(s)	1981
AccI	GTMKAC	1 cut(s)	119
AciI	CCGC	1 cut(s)	1823
AclI	AACGTT	1 cut(s)	2783
AclWI	GGATC	7 cut(s)	134, 233, 1012, 1264, 1529, 2364, 2565
AcoI	YGGCCR	1 cut(s)	1824
AcsI	RAATTY	4 cut(s)	83, 164, 2070, 2725
AcuI	CTGAAG	5 cut(s)	897, 1226, 1674, 2546, 2659
AcyI	GRCGYC	1 cut(s)	35
AfaI	GTAC	9 cut(s)	159, 181, 194, 439, 564, 808, 1193, 1973, 2147
AfiI	CCNNNNNNNGG	6 cut(s)	197, 1605, 1873, 1981, 2353, 2837
AflII	CTTAAG	1 cut(s)	2531
AflIII	ACRYGT	3 cut(s)	182, 2337, 2500
AhdI	GACNNNNNGTC	1 cut(s)	2677
AjiI	CACGTC	2 cut(s)	1214, 2338
AjnI	CCWGG	4 cut(s)	1463, 1468, 2260, 2760
AjuI	GAANNNNNNNTTGG	4 cut(s)	1311, 1343, 1395, 1427
AloI	GAACNNNNNNTCC	4 cut(s)	336, 368, 614, 646
Alw21I	GWGCWC	2 cut(s)	2574, 2668
Alw26I	GTCTC	3 cut(s)	807, 1133, 2690
Alw44I	GTGCAC	1 cut(s)	2570
AlwI	GGATC	7 cut(s)	134, 233, 1012, 1264, 1529, 2364, 2565
AlwNI	CAGNNNCTG	4 cut(s)	406, 1643, 2183, 2900
AoxI	GGCC	6 cut(s)	555, 1350, 1466, 1702, 1824, 2237
ApaLI	GTGCAC	1 cut(s)	2570
ApeKI	GCWGC	3 cut(s)	403, 406, 2900
ApoI	RAATTY	4 cut(s)	83, 164, 2070, 2725
ArsI	GACNNNNNNTTYG	2 cut(s)	2123, 2155
AseI	ATTAAT	1 cut(s)	1791
Asp700I	GAANNNNTTC	3 cut(s)	267, 371, 694
Asp718I	GGTACC	1 cut(s)	1971
AspS9I	GGNCC	4 cut(s)	598, 1702, 2238, 2362
AsuHPI	GGTGA	6 cut(s)	110, 1249, 1445, 1607, 2443, 2820
AsuII	TTCGAA	1 cut(s)	1697
AvaII	GGWCC	2 cut(s)	598, 2362
BaeGI	GKGCMC	1 cut(s)	2574
BaeI	ACNNNNGTAYC	4 cut(s)	95, 128, 1653, 1686
BanI	GGYRCC	3 cut(s)	1586, 1971, 2343
BanII	GRGCYC	1 cut(s)	1575
BarI	GAAGNNNNNNTAC	2 cut(s)	1382, 1414
BbsI	GAAGAC	2 cut(s)	30, 1680
Bbv12I	GWGCWC	2 cut(s)	2574, 2668
BbvI	GCAGC	3 cut(s)	393, 415, 2887
BccI	CCATC	7 cut(s)	292, 335, 520, 710, 1626, 2249, 2548
BciT130I	CCWGG	4 cut(s)	1465, 1470, 2262, 2762
BclI	TGATCA	1 cut(s)	1612
BcoDI	GTCTC	3 cut(s)	807, 1133, 2690
BfaI	CTAG	2 cut(s)	416, 2213
BfmI	CTRYAG	8 cut(s)	88, 831, 1008, 1566, 1635, 1871, 2631, 2657
BfrI	CTTAAG	1 cut(s)	2531
BfuAI	ACCTGC	1 cut(s)	2505
BisI	GCNGC	4 cut(s)	404, 407, 1824, 2901
BlsI	GCNGC	4 cut(s)	405, 408, 1825, 2902
Bme1390I	CCNGG	4 cut(s)	1465, 1470, 2262, 2762
Bme18I	GGWCC	2 cut(s)	598, 2362
BmeRI	GACNNNNNGTC	1 cut(s)	2677
BmgBI	CACGTC	2 cut(s)	1214, 2338
BmgT120I	GGNCC	4 cut(s)	598, 1702, 2238, 2362
BmiI	GGNNCC	4 cut(s)	1563, 1588, 1973, 2345
BmrFI	CCNGG	4 cut(s)	1465, 1470, 2262, 2762
BmrI	ACTGGG	3 cut(s)	701, 2005, 2700
BmuI	ACTGGG	3 cut(s)	701, 2005, 2700
BpiI	GAAGAC	2 cut(s)	30, 1680
BpmI	CTGGAG	3 cut(s)	508, 590, 1491
Bpu14I	TTCGAA	1 cut(s)	1697
BpuEI	CTTGAG	1 cut(s)	2105
BsaAI	YACGTR	1 cut(s)	111
BsaBI	GATNNNNATC	1 cut(s)	1617
BsaHI	GRCGYC	1 cut(s)	35
BsaJI	CCNNGG	4 cut(s)	558, 1000, 1492, 2760
BsaWI	WCCGGW	1 cut(s)	1552
BsaXI	ACNNNNNCTCC	2 cut(s)	336, 366
Bsc4I	CCNNNNNNNGG	6 cut(s)	197, 1605, 1873, 1981, 2353, 2837
Bse1I	ACTGG	8 cut(s)	707, 726, 977, 1353, 1599, 2000, 2365, 2695
Bse3DI	GCAATG	1 cut(s)	2433
Bse8I	GATNNNNATC	1 cut(s)	1617
BseBI	CCWGG	4 cut(s)	1465, 1470, 2262, 2762
BseDI	CCNNGG	4 cut(s)	558, 1000, 1492, 2760
BseGI	GGATG	5 cut(s)	597, 702, 730, 1114, 1460
BseJI	GATNNNNATC	1 cut(s)	1617
BseLI	CCNNNNNNNGG	6 cut(s)	197, 1605, 1873, 1981, 2353, 2837
BseMI	GCAATG	1 cut(s)	2433
BseMII	CTCAG	9 cut(s)	63, 137, 219, 897, 1429, 2382, 2601, 2836, 2907
BseNI	ACTGG	8 cut(s)	707, 726, 977, 1353, 1599, 2000, 2365, 2695
BseRI	GAGGAG	1 cut(s)	263
BseSI	GKGCMC	1 cut(s)	2574
BseXI	GCAGC	3 cut(s)	393, 415, 2887
BsgI	GTGCAG	1 cut(s)	2533
BshFI	GGCC	6 cut(s)	557, 1352, 1468, 1704, 1826, 2239
BshNI	GGYRCC	3 cut(s)	1586, 1971, 2343
BsiHKAI	GWGCWC	2 cut(s)	2574, 2668
BsiSI	CCGG	1 cut(s)	1553
BslFI	GGGAC	2 cut(s)	701, 2002
BslI	CCNNNNNNNGG	6 cut(s)	197, 1605, 1873, 1981, 2353, 2837
BsmAI	GTCTC	3 cut(s)	807, 1133, 2690
BsmFI	GGGAC	2 cut(s)	701, 2002
BsmI	GAATGC	3 cut(s)	1069, 2652, 2710
BsnI	GGCC	6 cut(s)	557, 1352, 1468, 1704, 1826, 2239
Bsp119I	TTCGAA	1 cut(s)	1697
Bsp1286I	GDGCHC	3 cut(s)	1575, 2574, 2668
Bsp19I	CCATGG	2 cut(s)	558, 1000
BspACI	CCGC	1 cut(s)	1823
BspANI	GGCC	6 cut(s)	557, 1352, 1468, 1704, 1826, 2239
BspCNI	CTCAG	9 cut(s)	64, 136, 220, 898, 1428, 2383, 2600, 2835, 2906
BspHI	TCATGA	1 cut(s)	466
BspLI	GGNNCC	4 cut(s)	1563, 1588, 1973, 2345
BspMAI	CTGCAG	5 cut(s)	835, 1012, 1639, 1875, 2661
BspMI	ACCTGC	1 cut(s)	2505
BspPI	GGATC	7 cut(s)	134, 233, 1012, 1264, 1529, 2364, 2565
BspQI	GCTCTTC	1 cut(s)	873
BspT104I	TTCGAA	1 cut(s)	1697
BspT107I	GGYRCC	3 cut(s)	1586, 1971, 2343
BspTI	CTTAAG	1 cut(s)	2531
BsrDI	GCAATG	1 cut(s)	2433
BsrI	ACTGG	8 cut(s)	707, 726, 977, 1353, 1599, 2000, 2365, 2695
BssECI	CCNNGG	4 cut(s)	558, 1000, 1492, 2760
BssNAI	GTATAC	1 cut(s)	120
BssNI	GRCGYC	1 cut(s)	35
BssT1I	CCWWGG	3 cut(s)	558, 1000, 1492
Bst1107I	GTATAC	1 cut(s)	120
Bst2UI	CCWGG	4 cut(s)	1465, 1470, 2262, 2762
Bst4CI	ACNGT	5 cut(s)	192, 731, 1386, 1786, 1971
Bst6I	CTCTTC	2 cut(s)	873, 1686
BstACI	GRCGYC	1 cut(s)	35
BstAFI	CTTAAG	1 cut(s)	2531
BstBAI	YACGTR	1 cut(s)	111
BstBI	TTCGAA	1 cut(s)	1697
BstC8I	GCNNGC	2 cut(s)	1959, 2638
BstDSI	CCRYGG	2 cut(s)	558, 1000
BstENI	CCTNNNNNAGG	1 cut(s)	1871
BstF5I	GGATG	5 cut(s)	597, 702, 730, 1114, 1460
BstMAI	GTCTC	3 cut(s)	807, 1133, 2690
BstMWI	GCNNNNNNNGC	4 cut(s)	143, 1963, 1997, 2909
BstNI	CCWGG	4 cut(s)	1465, 1470, 2262, 2762
BstNSI	RCATGY	3 cut(s)	186, 1866, 2504
BstSCI	CCNGG	4 cut(s)	1463, 1468, 2260, 2760
BstSFI	CTRYAG	8 cut(s)	88, 831, 1008, 1566, 1635, 1871, 2631, 2657
BstSLI	GKGCMC	1 cut(s)	2574
BstV1I	GCAGC	3 cut(s)	393, 415, 2887
BstV2I	GAAGAC	2 cut(s)	30, 1680
BstX2I	RGATCY	4 cut(s)	1004, 1534, 2356, 2557
BstYI	RGATCY	4 cut(s)	1004, 1534, 2356, 2557
BstZ17I	GTATAC	1 cut(s)	120
BsuRI	GGCC	6 cut(s)	557, 1352, 1468, 1704, 1826, 2239
BtgI	CCRYGG	2 cut(s)	558, 1000
BtrI	CACGTC	2 cut(s)	1214, 2338
BtsCI	GGATG	5 cut(s)	597, 702, 730, 1114, 1460
BtsI	GCAGTG	4 cut(s)	662, 828, 2172, 2666
BveI	ACCTGC	1 cut(s)	2505
Cac8I	GCNNGC	2 cut(s)	1959, 2638
CaiI	CAGNNNCTG	4 cut(s)	406, 1643, 2183, 2900
CciI	TCATGA	1 cut(s)	466
Cfr13I	GGNCC	4 cut(s)	598, 1702, 2238, 2362
CseI	GACGC	1 cut(s)	24
Csp6I	GTAC	9 cut(s)	158, 180, 193, 438, 563, 807, 1192, 1972, 2146
CspCI	CAANNNNNGTGG	2 cut(s)	756, 791
CviQI	GTAC	9 cut(s)	158, 180, 193, 438, 563, 807, 1192, 1972, 2146
DraI	TTTAAA	1 cut(s)	1728
DriI	GACNNNNNGTC	1 cut(s)	2677
EaeI	YGGCCR	1 cut(s)	1824
Eam1104I	CTCTTC	2 cut(s)	873, 1686
Eam1105I	GACNNNNNGTC	1 cut(s)	2677
EarI	CTCTTC	2 cut(s)	873, 1686
Eco130I	CCWWGG	3 cut(s)	558, 1000, 1492
Eco147I	AGGCCT	1 cut(s)	1468
Eco24I	GRGCYC	1 cut(s)	1575
Eco32I	GATATC	1 cut(s)	2225
Eco47I	GGWCC	2 cut(s)	598, 2362
Eco57I	CTGAAG	5 cut(s)	897, 1226, 1674, 2546, 2659
EcoNI	CCTNNNNNAGG	1 cut(s)	1871
EcoRII	CCWGG	4 cut(s)	1463, 1468, 2260, 2760
EcoRV	GATATC	1 cut(s)	2225
EcoT14I	CCWWGG	3 cut(s)	558, 1000, 1492
EcoT22I	ATGCAT	2 cut(s)	523, 841
EcoT38I	GRGCYC	1 cut(s)	1575
ErhI	CCWWGG	3 cut(s)	558, 1000, 1492
FalI	AAGNNNNNCTT	6 cut(s)	359, 391, 1074, 1106, 2298, 2330
FaqI	GGGAC	2 cut(s)	701, 2002
FauNDI	CATATG	1 cut(s)	2603
FbaI	TGATCA	1 cut(s)	1612
FblI	GTMKAC	1 cut(s)	119
Fnu4HI	GCNGC	4 cut(s)	404, 407, 1824, 2901
FokI	GGATG	5 cut(s)	604, 689, 737, 1121, 1447
FriOI	GRGCYC	1 cut(s)	1575
Fsp4HI	GCNGC	4 cut(s)	404, 407, 1824, 2901
FspBI	CTAG	2 cut(s)	416, 2213
GluI	GCNGC	4 cut(s)	404, 407, 1824, 2901
GsuI	CTGGAG	3 cut(s)	508, 590, 1491
HaeIII	GGCC	6 cut(s)	557, 1352, 1468, 1704, 1826, 2239
HapII	CCGG	1 cut(s)	1553
HgaI	GACGC	1 cut(s)	24
Hin1I	GRCGYC	1 cut(s)	35
HincII	GTYRAC	2 cut(s)	1434, 1911
HindII	GTYRAC	2 cut(s)	1434, 1911
HindIII	AAGCTT	2 cut(s)	958, 1816
HpaI	GTTAAC	1 cut(s)	1911
HpaII	CCGG	1 cut(s)	1553
HphI	GGTGA	6 cut(s)	110, 1249, 1445, 1607, 2443, 2820
Hpy166II	GTNNAC	9 cut(s)	120, 188, 271, 438, 1434, 1911, 2114, 2146, 2572
Hpy188III	TCNNGA	7 cut(s)	376, 467, 607, 2084, 2299, 2669, 2745
Hpy8I	GTNNAC	9 cut(s)	120, 188, 271, 438, 1434, 1911, 2114, 2146, 2572
Hpy99I	CGWCG	1 cut(s)	1971
HpyCH4III	ACNGT	5 cut(s)	192, 731, 1386, 1786, 1971
HpyCH4IV	ACGT	6 cut(s)	110, 533, 1213, 2116, 2337, 2783
HpyF10VI	GCNNNNNNNGC	4 cut(s)	143, 1963, 1997, 2909
HpySE526I	ACGT	6 cut(s)	110, 533, 1213, 2116, 2337, 2783
Hsp92I	GRCGYC	1 cut(s)	35
KpnI	GGTACC	1 cut(s)	1975
Ksp22I	TGATCA	1 cut(s)	1612
KspAI	GTTAAC	1 cut(s)	1911
LguI	GCTCTTC	1 cut(s)	873
LmnI	GCTCC	3 cut(s)	745, 869, 1890
Lsp1109I	GCAGC	3 cut(s)	393, 415, 2887
MaeI	CTAG	2 cut(s)	416, 2213
MaeII	ACGT	6 cut(s)	110, 533, 1213, 2116, 2337, 2783
MaeIII	GTNAC	6 cut(s)	51, 126, 1209, 1778, 2487, 2816
MfeI	CAATTG	2 cut(s)	505, 2348
MflI	RGATCY	4 cut(s)	1004, 1534, 2356, 2557
MhlI	GDGCHC	3 cut(s)	1575, 2574, 2668
MmeI	TCCRAC	2 cut(s)	1241, 2357
Mph1103I	ATGCAT	2 cut(s)	523, 841
MroXI	GAANNNNTTC	3 cut(s)	267, 371, 694
MslI	CAYNNNNRTG	3 cut(s)	465, 853, 2421
MspA1I	CMGCKG	1 cut(s)	406
MspCI	CTTAAG	1 cut(s)	2531
MspI	CCGG	1 cut(s)	1553
MspR9I	CCNGG	4 cut(s)	1465, 1470, 2262, 2762
MunI	CAATTG	2 cut(s)	505, 2348
Mva1269I	GAATGC	3 cut(s)	1069, 2652, 2710
MvaI	CCWGG	4 cut(s)	1465, 1470, 2262, 2762
MwoI	GCNNNNNNNGC	4 cut(s)	143, 1963, 1997, 2909
NcoI	CCATGG	2 cut(s)	558, 1000
NdeI	CATATG	1 cut(s)	2603
NlaIV	GGNNCC	4 cut(s)	1563, 1588, 1973, 2345
NmeAIII	GCCGAG	2 cut(s)	11, 2308
NmuCI	GTSAC	3 cut(s)	1209, 1778, 2487
NsiI	ATGCAT	2 cut(s)	523, 841
NspI	RCATGY	3 cut(s)	186, 1866, 2504
NspV	TTCGAA	1 cut(s)	1697
PagI	TCATGA	1 cut(s)	466
PceI	AGGCCT	1 cut(s)	1468
PciI	ACATGT	2 cut(s)	182, 2500
PciSI	GCTCTTC	1 cut(s)	873
PctI	GAATGC	3 cut(s)	1069, 2652, 2710
PdmI	GAANNNNTTC	3 cut(s)	267, 371, 694
PflFI	GACNNNGTC	1 cut(s)	1784
PflMI	CCANNNNNTGG	1 cut(s)	1981
PkrI	GCNGC	4 cut(s)	405, 408, 1825, 2902
Ppu21I	YACGTR	1 cut(s)	111
PscI	ACATGT	2 cut(s)	182, 2500
PshBI	ATTAAT	1 cut(s)	1791
PsiI	TTATAA	2 cut(s)	1080, 2124
Psp1406I	AACGTT	1 cut(s)	2783
Psp6I	CCWGG	4 cut(s)	1463, 1468, 2260, 2760
PspGI	CCWGG	4 cut(s)	1463, 1468, 2260, 2760
PspN4I	GGNNCC	4 cut(s)	1563, 1588, 1973, 2345
PspPI	GGNCC	4 cut(s)	598, 1702, 2238, 2362
PstI	CTGCAG	5 cut(s)	835, 1012, 1639, 1875, 2661
PstNI	CAGNNNCTG	4 cut(s)	406, 1643, 2183, 2900
PsuI	RGATCY	4 cut(s)	1004, 1534, 2356, 2557
PsyI	GACNNNGTC	1 cut(s)	1784
PvuII	CAGCTG	1 cut(s)	406
RsaI	GTAC	9 cut(s)	159, 181, 194, 439, 564, 808, 1193, 1973, 2147
RsaNI	GTAC	9 cut(s)	158, 180, 193, 438, 563, 807, 1192, 1972, 2146
RseI	CAYNNNNRTG	3 cut(s)	465, 853, 2421
SapI	GCTCTTC	1 cut(s)	873
SatI	GCNGC	4 cut(s)	404, 407, 1824, 2901
Sau96I	GGNCC	4 cut(s)	598, 1702, 2238, 2362
ScrFI	CCNGG	4 cut(s)	1465, 1470, 2262, 2762
SduI	GDGCHC	3 cut(s)	1575, 2574, 2668
SfcI	CTRYAG	8 cut(s)	88, 831, 1008, 1566, 1635, 1871, 2631, 2657
SfuI	TTCGAA	1 cut(s)	1697
SinI	GGWCC	2 cut(s)	598, 2362
SmiMI	CAYNNNNRTG	3 cut(s)	465, 853, 2421
SmlI	CTYRAG	2 cut(s)	2084, 2531
SmoI	CTYRAG	2 cut(s)	2084, 2531
SseBI	AGGCCT	1 cut(s)	1468
SsiI	CCGC	1 cut(s)	1823
SspMI	CTAG	2 cut(s)	416, 2213
StuI	AGGCCT	1 cut(s)	1468
StyD4I	CCNGG	4 cut(s)	1463, 1468, 2260, 2760
StyI	CCWWGG	3 cut(s)	558, 1000, 1492
TaaI	ACNGT	5 cut(s)	192, 731, 1386, 1786, 1971
TaiI	ACGT	6 cut(s)	113, 536, 1216, 2119, 2340, 2786
TaqI	TCGA	4 cut(s)	894, 1697, 1857, 2227
TatI	WGTACW	4 cut(s)	157, 437, 806, 1191
TauI	GCSGC	1 cut(s)	1826
TseFI	GTSAC	3 cut(s)	1209, 1778, 2487
TseI	GCWGC	3 cut(s)	403, 406, 2900
Tsp45I	GTSAC	3 cut(s)	1209, 1778, 2487
TspGWI	ACGGA	4 cut(s)	635, 1161, 1235, 1674
Tth111I	GACNNNGTC	1 cut(s)	1784
Van91I	CCANNNNNTGG	1 cut(s)	1981
Vha464I	CTTAAG	1 cut(s)	2531
VneI	GTGCAC	1 cut(s)	2570
VpaK11BI	GGWCC	2 cut(s)	598, 2362
VspI	ATTAAT	1 cut(s)	1791
XagI	CCTNNNNNAGG	1 cut(s)	1871
XapI	RAATTY	4 cut(s)	83, 164, 2070, 2725
XceI	RCATGY	3 cut(s)	186, 1866, 2504
XmiI	GTMKAC	1 cut(s)	119
XmnI	GAANNNNTTC	3 cut(s)	267, 371, 694
XspI	CTAG	2 cut(s)	416, 2213
Zsp2I	ATGCAT	2 cut(s)	523, 841

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.