Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0003027

Physical Location & Seq

Genomic Coordinates Reverse (-)

13095755 .. 13107385

Gene Structure 11631 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G151400.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3684 bp

ATGGCGATGGACACCAATTTCGCATCCTCATTGTTTGAGAATCTAAACCTGGAAGATCCATGGCTTCCTCCAACTACCTGGGAATCGATCCCATCCGAAAGCGGAAATTTCCATCTTCGAAACCCCAAGTCCTCTTCCTCTCACTCCCTCTACCATGCTTCCACCGTCTCCGAGGCAAGTTTGGTGCGGTTGGCGATGAATGCACTGCAAGGAGTTGAAACGGCCCTTGTTAGCATCCAGAAACTTTCTGCTGCATTTTGCTCTGACCCGGCTGATAGGACCTTCCATCAAATTCCAAGTCTGTGGAGTAGGTCTTCAAGCACTCATGCTCTGGGAAACATTCTCCAGCCCATTGGCTGCTCAGGTTTGCTTGTCTTTCTTCTCCGGAAATTTGTGGACTATTTTTCGAATTTGAATGTGGAAAGTGAAGACCATGTTGATGGTGAAGCTCAAGTGAAACAGTGCCCTCCATATAGTCTTGTTAATCATGCTTTCGCTGTTTCGGTGGGAAAGGTTGTGGAAGGTTACATGTGTGCACTGGATACCTTGTATGCATCAGTGGGTTTAAGGCGCTCTTCGTGTCCGTCTTCTGTGGTGGGATGTCTGAACAGTGTAGTGTATTCTGTACTTACTTTGTTGGAGTTCTATTTGCACACAAAGGAATTGAGGACTCAGATTGAAGCCCTTACGAACTTATGCAACTTATATCAATTCTCCAGTTGTTTCTCAGTATCCTCTCTTGAAGAATTGATTACAAAAGCAAATTTGGAATTTTGTAATTTCTACAGAGGAGGGGATTTACTCTCATATCTGTATACTCAATTACAGGTTGCTGATCCTGCTCATCGTCCTTTACTCAAATTTCTTTTTCTTCGTACATGTGAACCGTATTGTGGCTTTATTAGATCATGGATTTTCAAAGCTGAGATTAGTGACCCTTACAAGGAGTTTGTTGTAGAATATGCTGACAGTCTATCTCCAAATCAACATGGTAAAGCTGACATCTCTATTGACTTCCCATTGGCAACTATTAGGGAACAAGATGGAGTTTCTGTTCCTTGTTTTTTGAAGGATGTCTTGATTCCACTTGTCAGAGCTGGTCAGCAGCTGCAAGTTCTAGTGAAATTGCTTGAATTGTGTACTTTTGTTGCCACCAACGACCATACTTACGAGGGTTTTCTTCCCTGCTGGACTGGATTTTCGGGCAATTGTCCATATTATTCGTCTCCATTGACATTTATAAAAGGAAATGTAGAGGCCATGTTACTTTCAAGGGACAGATATTACAGAAGAATGCAGGAAAAACTTGAGAATCTTTCAGCGAAATTAGAGTTCAGATATCAACAGGTAGTTCGACCAGGTACACTGCCTGTTCTCTTGGATAATGGTGGTAGGAGTTCAACCAACCCAGGTTTATTTGCTTTGGATGACAATTTTATTCCTTCTCCAACAAATGATAAAAGGGAGTCAAATGGGGTTCATGATTTGGATTCTGGTGAGTTAAGTGCAAGGGATGGTCTATCTGACCTCACGGATTCTTACGAGTCATCTGAATGTTCATTTGACAGTACTTCTGCAGAGCAAAATGTGTCTGAGCAGATGGTTGAGCTTCCCAATCATATTGTTGGGATGGAACAAAAATATTTATCTGCCTTAAGCTTTTCAATGAGTATGCCCGTTGATAATTTGCAAAAGGCTCATGTACGTGAAGAGTCATGCCATATAGTAAGTGACCAGAGTAGACTTTGTGAAAGAAGAGATGCCCTAGCACATTCTCATCATAAAGGTGTGTTTACAAGTCAAATATCTGTGCCCATAAAACCAAAAGAATCGAACTTGTCAGCTATGTCTGATGTTCAGTTTGCAGATTGTCTATCTGATAAGGACTGGCCAGAAGGTGGTCTTTTTGACAGTTATTCTGCCATTGATGAAGAGTACAAAGATGGTCGAAGGTCACATCCAATGGACTCTCCCTCAAAGGTGAATGAAAGAATACTAGAGGCCTTAAAGGAGGGCACATCATATTTCAGAAAAAGAGTTGGGACTAATAGTGCTTTAATTGAAGAAGCCTATGGCAAGGATCAACCTCAAAATGTGACATATACTTCTTCAGATTTATTTACGTTACAACAGTGGAAAGTTAACTCCCATAACAATTTTCTCAGCATGAATCCAATGTTGACAAAGAATAACTTACTTCACCTGATAACCAAGCCTGGAGAGAGATACGGAAGGGAATTTGGACATTCTTTGCCTTGCTTTGAATTTTCTTTGATAAAAGACCCTTTTAAGGTGTGTCTGGAAAAGCTACCTGCAGGGCTCGTGGACTTCAATGCCTCTGTTACCAGTGTTAAGAGCGATCGCTTTGGGAAACAAGATTTTGGTGGGGATAGTGTCTCGATTGATAAAACCAAAGTATCTGATTCTCTTCCATTTTCAGACTCAAAGGACCACGACCAAGAAAATGCTAATTTAACAAATGTTTCTGGTGGTAGTTGTTGGGAGAGTTTGCTTGGTAGATTCAGTGACACTGTCGTTAATAGAGTTGAAGATCACGGACAAAGCTTGTCAGAAATTTTTGAGATACCACTTGATTTTATTATCGACAAATGCCTTCTGCAGGAAATCATGCTTCAATATAAGTATGTCAGCAAGTTAACTATTAAGTTGCTTGAAGAAGGATTTGATTTGCAAGAACATTTACTGGCTCTGCGGCGATACCACTTTATGGAACTAGCGGACTGGGCAGATTTGTTTATTATGTCCCTTTGGCATCATAAATGGTGTGTTACAGAGGCAGATCATAGACTTTCAGAAATTCAAGGTTTCCTTGAGTCATCAGTTCAGAGGTCATCATGTGAACGTGACCCTCATAAGGACAGGTTATTTGTGTACATGAAAGGACATGATGCAATGCCTCTTTCAGCGTCTGTTATTGGAGTCCATTCCTTCAATTTTCTTGGTTTGGGTTATAGAGTAGACTGGCCAATCAGTATTATTTTGAGTCCTAGTGCATTGAAAATGTATGCCGAGATATTCAGCTTTCTGATACAAGTGAAGCTTGCTATTTTCTCATTGACTGATGTATGGCGCCAATTAAAGGATTTGGTGCACTCAATTAGTCAGAATAACGACTCTGAACAAAATGAAAGGGAAGTGAGTCATTTCAATGCATTAGTGAAGATGAGGCACCAGGTCAATCATTTTGTATCTACGTTACAGCAATATGTGGAGTCACAGCTATCACATGTATCATGGTGCAGGTTTCTATACTCACTTAAGCATAAGGTCAAGGATATGATGGATCTTCAGTCTGTACATCTGGCATATTTAATAGATTCGCTTGACATATGTTTCCTCTCTGATGAAACACGACCTATAGCTCGGATCATTGAGAGCATTCTGCAGTGTGCTCTTGACTTCAGGTCGTGTCTTACCGGGGAAATGTGGGATGTGGGAACAAGTCAAGGGAATTTAATTGCAAGACTTTCTGGAATCAATATATCTCAGGTGGTCGTAATAAAACAAATGTTTGACAAGAATATGAAAGAACTGCACCTCTGTTACCTCAAGTCACCTAAACATGGGAAATTTGGACTTTCTCATTTTTGGGAATACCTCAACTACAACAAGTATTACTCGGATGTTGGTAATGAAATGGCCTATTATGCCTTCTCAGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0000278 GO:0000280 GO:0000923 GO:0000930 GO:0000931 GO:0003674 GO:0005198 GO:0005200 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005813 GO:0005815 GO:0005816 GO:0005822 GO:0005825 GO:0005829 GO:0005856 GO:0006810 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007020 GO:0007049 GO:0007051 GO:0007052 GO:0007097 GO:0007098 GO:0007163 GO:0008017 GO:0008092 GO:0008150 GO:0008274 GO:0008275 GO:0008360 GO:0009987 GO:0015630 GO:0015631 GO:0016043 GO:0022402 GO:0022414 GO:0022603 GO:0022604 GO:0022607 GO:0031021 GO:0031023 GO:0031109 GO:0031122 GO:0032153 GO:0032155 GO:0032991 GO:0034453 GO:0034622 GO:0034631 GO:0043015 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044450 GO:0044464 GO:0044732 GO:0046785 GO:0046907 GO:0048285 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051179 GO:0051225 GO:0051234 GO:0051258 GO:0051298 GO:0051321 GO:0051415 GO:0051418 GO:0051640 GO:0051641 GO:0051647 GO:0051649 GO:0051656 GO:0061496 GO:0061497 GO:0065003 GO:0065007 GO:0065008 GO:0070925 GO:0071840 GO:0071957 GO:0071963 GO:0072393 GO:0090307 GO:0097435 GO:0098863 GO:0099098 GO:0099111 GO:0140014 GO:1902850 GO:1903047 GO:1990734

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Spc97_Spc98

Protein Analysis

1228

Amino Acids

138.95

Weight (kDa)

5.54

Isoelectric Point (pI)

44.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003027)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G43610 AT3G43610 AT3G43610
fragaria_vesca	FvH4_3g27030 FvH4_3g27031 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990
malus_domestica	MD03G1162300.v1.1 MD03G1162400.v1.1 MD11G1178600.v1.1
prunus_persica	Prupe.6G151400_v2.0.a1 Prupe.6G151400_v2.0.a1 Prupe.6G151400_v2.0.a1
pyrus_communis	pycom11g15400
rosa_chinensis	RchiOBHm_Chr5g0049541
rosa_laevigata	RLG00000034625
rosa_multiflora	Rmu_co8383485.1_g000001 Rmu_sc0013032.1_g000004
rosa_roxburghii	Rroxscaffold_1G00032160
rosa_rugosa	Rorug05G0248900 Rorug05G0249000
rosa_samantha	Rh5AG325500 Rh5BG336700 Rh5CG361500 Rh5DG348800
rosa_wichuraiana	Rw5G030750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1241
Acc36I	ACCTGC	2 cut(s)	2320, 3252
AccB1I	GGYRCC	2 cut(s)	3090, 3189
AccB7I	CCANNNNNTGG	2 cut(s)	1898, 2728
AccI	GTMKAC	3 cut(s)	815, 1741, 2979
AccIII	TCCGGA	1 cut(s)	384
AciI	CCGC	4 cut(s)	102, 187, 2713, 2738
AclWI	GGATC	6 cut(s)	50, 82, 830, 2088, 3312, 3395
AcoI	YGGCCR	2 cut(s)	1889, 2984
AcuI	CTGAAG	3 cut(s)	2094, 3293, 3406
AcyI	GRCGYC	1 cut(s)	3091
AfaI	GTAC	9 cut(s)	627, 877, 1141, 1363, 1570, 1704, 1937, 2894, 3318
AfiI	CCNNNNNNNGG	9 cut(s)	893, 943, 1898, 2290, 2620, 2728, 2875, 3100, 3584
AflII	CTTAAG	2 cut(s)	1654, 3278
AflIII	ACRYGT	3 cut(s)	528, 878, 3247
AhdI	GACNNNNNGTC	1 cut(s)	3424
AjnI	CCWGG	6 cut(s)	48, 77, 1357, 1408, 2215, 3192
AloI	GAACNNNNNNTCC	2 cut(s)	1038, 1070
Alw21I	GWGCWC	3 cut(s)	538, 3114, 3415
Alw26I	GTCTC	3 cut(s)	172, 1230, 2401
Alw44I	GTGCAC	2 cut(s)	534, 3110
AlwI	GGATC	6 cut(s)	50, 82, 830, 2088, 3312, 3395
AlwNI	CAGNNNCTG	2 cut(s)	1108, 2930
Aor13HI	TCCGGA	1 cut(s)	384
AoxI	GGCC	6 cut(s)	222, 1257, 1889, 2001, 2984, 3660
ApaLI	GTGCAC	2 cut(s)	534, 3110
ApeKI	GCWGC	4 cut(s)	251, 357, 1105, 1108
ArsI	GACNNNNNNTTYG	7 cut(s)	34, 283, 315, 1183, 1215, 2870, 2902
AsiSI	GCGATCGC	1 cut(s)	2362
AspLEI	GCGC	2 cut(s)	573, 3093
AspS9I	GGNCC	3 cut(s)	223, 279, 2449
AsuC2I	CCSGG	2 cut(s)	269, 3439
AsuHPI	GGTGA	5 cut(s)	455, 1508, 1993, 2192, 3567
AsuII	TTCGAA	2 cut(s)	118, 407
AvaII	GGWCC	2 cut(s)	279, 2449
BaeGI	GKGCMC	5 cut(s)	467, 538, 1815, 2018, 3114
BaeI	ACNNNNGTAYC	2 cut(s)	2400, 2433
BalI	TGGCCA	2 cut(s)	1891, 2986
BanI	GGYRCC	2 cut(s)	3090, 3189
BanII	GRGCYC	1 cut(s)	2322
BauI	CACGAG	1 cut(s)	2321
BbsI	GAAGAC	3 cut(s)	306, 435, 579
Bbv12I	GWGCWC	3 cut(s)	538, 3114, 3415
BbvI	GCAGC	4 cut(s)	238, 344, 1095, 1117
BceAI	ACGGC	1 cut(s)	237
BciT130I	CCWGG	6 cut(s)	50, 79, 1359, 1410, 2217, 3194
BciVI	GTATCC	2 cut(s)	535, 742
BcnI	CCSGG	2 cut(s)	269, 3439
BcoDI	GTCTC	3 cut(s)	172, 1230, 2401
BfaI	CTAG	5 cut(s)	1118, 1766, 1997, 2735, 3009
BfmI	CTRYAG	6 cut(s)	784, 1575, 2313, 2618, 3378, 3404
BfoI	RGCGCY	2 cut(s)	574, 3094
BfrI	CTTAAG	2 cut(s)	1654, 3278
BfuAI	ACCTGC	2 cut(s)	2320, 3252
BfuI	GTATCC	2 cut(s)	535, 742
BisI	GCNGC	5 cut(s)	252, 358, 1106, 1109, 2714
BlsI	GCNGC	5 cut(s)	253, 359, 1107, 1110, 2715
BmcAI	AGTACT	1 cut(s)	1570
Bme1390I	CCNGG	8 cut(s)	50, 79, 269, 1359, 1410, 2217, 3194, 3439
Bme18I	GGWCC	2 cut(s)	279, 2449
BmeRI	GACNNNNNGTC	1 cut(s)	3424
BmgT120I	GGNCC	3 cut(s)	223, 279, 2449
BmiI	GGNNCC	2 cut(s)	3092, 3191
BmrFI	CCNGG	8 cut(s)	50, 79, 269, 1359, 1410, 2217, 3194, 3439
BmrI	ACTGGG	1 cut(s)	2752
BmsI	GCATC	6 cut(s)	32, 243, 563, 1750, 2782, 2899
BmuI	ACTGGG	1 cut(s)	2752
BpiI	GAAGAC	3 cut(s)	306, 435, 579
BpmI	CTGGAG	3 cut(s)	329, 700, 2238
Bpu10I	CCTNAGC	1 cut(s)	361
Bpu14I	TTCGAA	2 cut(s)	118, 407
BpuEI	CTTGAG	4 cut(s)	435, 1328, 2852, 3554
BpuMI	CCSGG	2 cut(s)	269, 3439
Bsa29I	ATCGAT	1 cut(s)	86
BsaAI	YACGTR	1 cut(s)	1706
BsaHI	GRCGYC	1 cut(s)	3091
BsaJI	CCNNGG	5 cut(s)	59, 78, 171, 1408, 3438
BsaWI	WCCGGW	1 cut(s)	384
BsaXI	ACNNNNNCTCC	2 cut(s)	1038, 1068
Bsc4I	CCNNNNNNNGG	9 cut(s)	893, 943, 1898, 2290, 2620, 2728, 2875, 3100, 3584
Bse1I	ACTGG	8 cut(s)	543, 717, 1198, 1892, 2346, 2709, 2747, 2987
Bse3DI	GCAATG	1 cut(s)	2919
BseAI	TCCGGA	1 cut(s)	384
BseBI	CCWGG	6 cut(s)	50, 79, 1359, 1410, 2217, 3194
BseCI	ATCGAT	1 cut(s)	86
BseDI	CCNNGG	5 cut(s)	59, 78, 171, 1408, 3438
BseLI	CCNNNNNNNGG	9 cut(s)	893, 943, 1898, 2290, 2620, 2728, 2875, 3100, 3584
BseMI	GCAATG	1 cut(s)	2919
BseMII	CTCAG	7 cut(s)	375, 686, 741, 915, 1584, 2176, 3521
BseNI	ACTGG	8 cut(s)	543, 717, 1198, 1892, 2346, 2709, 2747, 2987
BseRI	GAGGAG	1 cut(s)	804
BseSI	GKGCMC	5 cut(s)	467, 538, 1815, 2018, 3114
BseXI	GCAGC	4 cut(s)	238, 344, 1095, 1117
BsgI	GTGCAG	2 cut(s)	3280, 3539
Bsh1285I	CGRYCG	1 cut(s)	2362
BshFI	GGCC	6 cut(s)	224, 1259, 1891, 2003, 2986, 3662
BshNI	GGYRCC	2 cut(s)	3090, 3189
BshVI	ATCGAT	1 cut(s)	86
BsiEI	CGRYCG	1 cut(s)	2362
BsiHKAI	GWGCWC	3 cut(s)	538, 3114, 3415
BsiSI	CCGG	3 cut(s)	269, 385, 3438
BslFI	GGGAC	3 cut(s)	1289, 2056, 2749
BslI	CCNNNNNNNGG	9 cut(s)	893, 943, 1898, 2290, 2620, 2728, 2875, 3100, 3584
BsmAI	GTCTC	3 cut(s)	172, 1230, 2401
BsmBI	CGTCTC	2 cut(s)	172, 1230
BsmFI	GGGAC	3 cut(s)	1289, 2056, 2749
BsmI	GAATGC	3 cut(s)	205, 1299, 3399
BsnI	GGCC	6 cut(s)	224, 1259, 1891, 2003, 2986, 3662
Bsp119I	TTCGAA	2 cut(s)	118, 407
Bsp1286I	GDGCHC	7 cut(s)	467, 538, 1815, 2018, 2322, 3114, 3415
Bsp13I	TCCGGA	1 cut(s)	384
Bsp1407I	TGTACA	2 cut(s)	2892, 3316
Bsp19I	CCATGG	1 cut(s)	59
BspACI	CCGC	4 cut(s)	102, 187, 2713, 2738
BspANI	GGCC	6 cut(s)	224, 1259, 1891, 2003, 2986, 3662
BspCNI	CTCAG	7 cut(s)	374, 685, 740, 916, 1585, 2175, 3520
BspDI	ATCGAT	1 cut(s)	86
BspEI	TCCGGA	1 cut(s)	384
BspHI	TCATGA	1 cut(s)	1480
BspLI	GGNNCC	2 cut(s)	3092, 3191
BspMAI	CTGCAG	4 cut(s)	1579, 2317, 2622, 3408
BspMI	ACCTGC	2 cut(s)	2320, 3252
BspPI	GGATC	6 cut(s)	50, 82, 830, 2088, 3312, 3395
BspQI	GCTCTTC	1 cut(s)	580
BspT104I	TTCGAA	2 cut(s)	118, 407
BspT107I	GGYRCC	2 cut(s)	3090, 3189
BspTI	CTTAAG	2 cut(s)	1654, 3278
BsrDI	GCAATG	1 cut(s)	2919
BsrGI	TGTACA	2 cut(s)	2892, 3316
BsrI	ACTGG	8 cut(s)	543, 717, 1198, 1892, 2346, 2709, 2747, 2987
BssECI	CCNNGG	5 cut(s)	59, 78, 171, 1408, 3438
BssNAI	GTATAC	1 cut(s)	816
BssNI	GRCGYC	1 cut(s)	3091
BssSI	CACGAG	1 cut(s)	2321
BssT1I	CCWWGG	1 cut(s)	59
Bst1107I	GTATAC	1 cut(s)	816
Bst2BI	CACGAG	1 cut(s)	2321
Bst2UI	CCWGG	6 cut(s)	50, 79, 1359, 1410, 2217, 3194
Bst4CI	ACNGT	9 cut(s)	166, 462, 611, 888, 971, 1568, 1913, 2133, 2533
Bst6I	CTCTTC	6 cut(s)	139, 580, 1704, 1750, 1926, 2433
BstACI	GRCGYC	1 cut(s)	3091
BstAFI	CTTAAG	2 cut(s)	1654, 3278
BstAUI	TGTACA	2 cut(s)	2892, 3316
BstBAI	YACGTR	1 cut(s)	1706
BstBI	TTCGAA	2 cut(s)	118, 407
BstC8I	GCNNGC	1 cut(s)	3063
BstDEI	CTNAG	8 cut(s)	361, 672, 727, 924, 1593, 2162, 3507, 3676
BstDSI	CCRYGG	1 cut(s)	59
BstENI	CCTNNNNNAGG	1 cut(s)	2618
BstH2I	RGCGCY	2 cut(s)	574, 3094
BstHHI	GCGC	2 cut(s)	573, 3093
BstMAI	GTCTC	3 cut(s)	172, 1230, 2401
BstMCI	CGRYCG	1 cut(s)	2362
BstMWI	GCNNNNNNNGC	4 cut(s)	200, 839, 2744, 3668
BstNI	CCWGG	6 cut(s)	50, 79, 1359, 1410, 2217, 3194
BstNSI	RCATGY	3 cut(s)	532, 882, 3251
BstSCI	CCNGG	8 cut(s)	48, 77, 267, 1357, 1408, 2215, 3192, 3437
BstSFI	CTRYAG	6 cut(s)	784, 1575, 2313, 2618, 3378, 3404
BstSLI	GKGCMC	5 cut(s)	467, 538, 1815, 2018, 3114
BstV1I	GCAGC	4 cut(s)	238, 344, 1095, 1117
BstV2I	GAAGAC	3 cut(s)	306, 435, 579
BstX2I	RGATCY	2 cut(s)	55, 3304
BstXI	CCANNNNNNTGG	4 cut(s)	78, 303, 353, 440
BstYI	RGATCY	2 cut(s)	55, 3304
BstZ17I	GTATAC	1 cut(s)	816
Bsu15I	ATCGAT	1 cut(s)	86
BsuI	GTATCC	2 cut(s)	535, 742
BsuRI	GGCC	6 cut(s)	224, 1259, 1891, 2003, 2986, 3662
BsuTUI	ATCGAT	1 cut(s)	86
BtgI	CCRYGG	1 cut(s)	59
BtgZI	GCGATG	2 cut(s)	20, 209
BtsI	GCAGTG	3 cut(s)	203, 1364, 3413
BveI	ACCTGC	2 cut(s)	2320, 3252
Cac8I	GCNNGC	1 cut(s)	3063
CaiI	CAGNNNCTG	2 cut(s)	1108, 2930
CciI	TCATGA	1 cut(s)	1480
CfoI	GCGC	2 cut(s)	573, 3093
Cfr13I	GGNCC	3 cut(s)	223, 279, 2449
ClaI	ATCGAT	1 cut(s)	86
CseI	GACGC	1 cut(s)	2916
CsiI	ACCWGGT	2 cut(s)	1357, 3192
Csp6I	GTAC	9 cut(s)	626, 876, 1140, 1362, 1569, 1703, 1936, 2893, 3317
CviQI	GTAC	9 cut(s)	626, 876, 1140, 1362, 1569, 1703, 1936, 2893, 3317
DdeI	CTNAG	8 cut(s)	361, 672, 727, 924, 1593, 2162, 3507, 3676
DinI	GGCGCC	1 cut(s)	3092
DriI	GACNNNNNGTC	1 cut(s)	3424
EaeI	YGGCCR	2 cut(s)	1889, 2984
Eam1104I	CTCTTC	6 cut(s)	139, 580, 1704, 1750, 1926, 2433
Eam1105I	GACNNNNNGTC	1 cut(s)	3424
EarI	CTCTTC	6 cut(s)	139, 580, 1704, 1750, 1926, 2433
Eco130I	CCWWGG	1 cut(s)	59
Eco147I	AGGCCT	1 cut(s)	2003
Eco24I	GRGCYC	1 cut(s)	2322
Eco32I	GATATC	1 cut(s)	1340
Eco47I	GGWCC	2 cut(s)	279, 2449
Eco57I	CTGAAG	3 cut(s)	2094, 3293, 3406
EcoNI	CCTNNNNNAGG	1 cut(s)	2618
EcoO109I	RGGNCCY	1 cut(s)	279
EcoRII	CCWGG	6 cut(s)	48, 77, 1357, 1408, 2215, 3192
EcoRV	GATATC	1 cut(s)	1340
EcoT14I	CCWWGG	1 cut(s)	59
EcoT22I	ATGCAT	2 cut(s)	556, 3175
EcoT38I	GRGCYC	1 cut(s)	2322
EgeI	GGCGCC	1 cut(s)	3092
EheI	GGCGCC	1 cut(s)	3092
ErhI	CCWWGG	1 cut(s)	59
Esp3I	CGTCTC	2 cut(s)	172, 1230
FaqI	GGGAC	3 cut(s)	1289, 2056, 2749
FauNDI	CATATG	1 cut(s)	3350
FblI	GTMKAC	3 cut(s)	815, 1741, 2979
Fnu4HI	GCNGC	5 cut(s)	252, 358, 1106, 1109, 2714
FriOI	GRGCYC	1 cut(s)	2322
Fsp4HI	GCNGC	5 cut(s)	252, 358, 1106, 1109, 2714
FspBI	CTAG	5 cut(s)	1118, 1766, 1997, 2735, 3009
GlaI	GCGC	2 cut(s)	572, 3092
GluI	GCNGC	5 cut(s)	252, 358, 1106, 1109, 2714
GsuI	CTGGAG	3 cut(s)	329, 700, 2238
HaeII	RGCGCY	2 cut(s)	574, 3094
HaeIII	GGCC	6 cut(s)	224, 1259, 1891, 2003, 2986, 3662
HapII	CCGG	3 cut(s)	269, 385, 3438
HgaI	GACGC	1 cut(s)	2916
HhaI	GCGC	2 cut(s)	573, 3093
Hin1I	GRCGYC	1 cut(s)	3091
Hin6I	GCGC	2 cut(s)	571, 3091
HinP1I	GCGC	2 cut(s)	571, 3091
HincII	GTYRAC	3 cut(s)	2143, 2181, 2658
HindII	GTYRAC	3 cut(s)	2143, 2181, 2658
HindIII	AAGCTT	3 cut(s)	1657, 2563, 3059
HpaI	GTTAAC	2 cut(s)	2143, 2658
HpaII	CCGG	3 cut(s)	269, 385, 3438
HphI	GGTGA	5 cut(s)	455, 1508, 1993, 2192, 3567
Hpy188III	TCNNGA	9 cut(s)	238, 385, 740, 1078, 1481, 2300, 2398, 3416, 3492
HpyCH4III	ACNGT	9 cut(s)	166, 462, 611, 888, 971, 1568, 1913, 2133, 2533
HpyCH4IV	ACGT	4 cut(s)	1705, 2123, 2863, 3215
HpyF10VI	GCNNNNNNNGC	4 cut(s)	200, 839, 2744, 3668
HpyF3I	CTNAG	8 cut(s)	361, 672, 727, 924, 1593, 2162, 3507, 3676
HpySE526I	ACGT	4 cut(s)	1705, 2123, 2863, 3215
Hsp92I	GRCGYC	1 cut(s)	3091
HspAI	GCGC	2 cut(s)	571, 3091
KasI	GGCGCC	1 cut(s)	3090
Kpn2I	TCCGGA	1 cut(s)	384
KspAI	GTTAAC	2 cut(s)	2143, 2658
LguI	GCTCTTC	1 cut(s)	580
Lsp1109I	GCAGC	4 cut(s)	238, 344, 1095, 1117
LweI	GCATC	6 cut(s)	32, 243, 563, 1750, 2782, 2899
MabI	ACCWGGT	2 cut(s)	1357, 3192
MaeI	CTAG	5 cut(s)	1118, 1766, 1997, 2735, 3009
MaeII	ACGT	4 cut(s)	1705, 2123, 2863, 3215
MfeI	CAATTG	1 cut(s)	1207
MflI	RGATCY	2 cut(s)	55, 3304
MhlI	GDGCHC	7 cut(s)	467, 538, 1815, 2018, 2322, 3114, 3415
MlsI	TGGCCA	2 cut(s)	1891, 2986
MluNI	TGGCCA	2 cut(s)	1891, 2986
Mly113I	GGCGCC	1 cut(s)	3091
MmeI	TCCRAC	3 cut(s)	95, 618, 1472
Mox20I	TGGCCA	2 cut(s)	1891, 2986
Mph1103I	ATGCAT	2 cut(s)	556, 3175
MroI	TCCGGA	1 cut(s)	384
MscI	TGGCCA	2 cut(s)	1891, 2986
MslI	CAYNNNNRTG	5 cut(s)	438, 1552, 1704, 1785, 3168
Msp20I	TGGCCA	2 cut(s)	1891, 2986
MspA1I	CMGCKG	1 cut(s)	1108
MspCI	CTTAAG	2 cut(s)	1654, 3278
MspI	CCGG	3 cut(s)	269, 385, 3438
MspR9I	CCNGG	8 cut(s)	50, 79, 269, 1359, 1410, 2217, 3194, 3439
MunI	CAATTG	1 cut(s)	1207
Mva1269I	GAATGC	3 cut(s)	205, 1299, 3399
MvaI	CCWGG	6 cut(s)	50, 79, 1359, 1410, 2217, 3194
MwoI	GCNNNNNNNGC	4 cut(s)	200, 839, 2744, 3668
NarI	GGCGCC	1 cut(s)	3091
NciI	CCSGG	2 cut(s)	269, 3439
NcoI	CCATGG	1 cut(s)	59
NdeI	CATATG	1 cut(s)	3350
NlaIV	GGNNCC	2 cut(s)	3092, 3191
NmeAIII	GCCGAG	1 cut(s)	3055
NmuCI	GTSAC	8 cut(s)	932, 1730, 1953, 2095, 2525, 2864, 3234, 3573
NsiI	ATGCAT	2 cut(s)	556, 3175
NspI	RCATGY	3 cut(s)	532, 882, 3251
NspV	TTCGAA	2 cut(s)	118, 407
PagI	TCATGA	1 cut(s)	1480
PceI	AGGCCT	1 cut(s)	2003
PciI	ACATGT	3 cut(s)	528, 878, 3247
PciSI	GCTCTTC	1 cut(s)	580
PctI	GAATGC	3 cut(s)	205, 1299, 3399
PflFI	GACNNNGTC	1 cut(s)	2531
PflMI	CCANNNNNTGG	2 cut(s)	1898, 2728
PkrI	GCNGC	5 cut(s)	253, 359, 1107, 1110, 2715
Ple19I	CGATCG	1 cut(s)	2362
PluTI	GGCGCC	1 cut(s)	3094
Ppu21I	YACGTR	1 cut(s)	1706
PpuMI	RGGWCCY	1 cut(s)	279
PscI	ACATGT	3 cut(s)	528, 878, 3247
PsiI	TTATAA	1 cut(s)	1241
Psp5II	RGGWCCY	1 cut(s)	279
Psp6I	CCWGG	6 cut(s)	48, 77, 1357, 1408, 2215, 3192
PspGI	CCWGG	6 cut(s)	48, 77, 1357, 1408, 2215, 3192
PspN4I	GGNNCC	2 cut(s)	3092, 3191
PspPI	GGNCC	3 cut(s)	223, 279, 2449
PspPPI	RGGWCCY	1 cut(s)	279
PstI	CTGCAG	4 cut(s)	1579, 2317, 2622, 3408
PstNI	CAGNNNCTG	2 cut(s)	1108, 2930
PsuI	RGATCY	2 cut(s)	55, 3304
PsyI	GACNNNGTC	1 cut(s)	2531
PvuI	CGATCG	1 cut(s)	2362
PvuII	CAGCTG	1 cut(s)	1108
RgaI	GCGATCGC	1 cut(s)	2362
RsaI	GTAC	9 cut(s)	627, 877, 1141, 1363, 1570, 1704, 1937, 2894, 3318
RsaNI	GTAC	9 cut(s)	626, 876, 1140, 1362, 1569, 1703, 1936, 2893, 3317
RseI	CAYNNNNRTG	5 cut(s)	438, 1552, 1704, 1785, 3168
SapI	GCTCTTC	1 cut(s)	580
SatI	GCNGC	5 cut(s)	252, 358, 1106, 1109, 2714
Sau96I	GGNCC	3 cut(s)	223, 279, 2449
SbfI	CCTGCAGG	1 cut(s)	2317
ScaI	AGTACT	1 cut(s)	1570
ScrFI	CCNGG	8 cut(s)	50, 79, 269, 1359, 1410, 2217, 3194, 3439
SdaI	CCTGCAGG	1 cut(s)	2317
SduI	GDGCHC	7 cut(s)	467, 538, 1815, 2018, 2322, 3114, 3415
SexAI	ACCWGGT	2 cut(s)	1357, 3192
SfaAI	GCGATCGC	1 cut(s)	2362
SfaNI	GCATC	6 cut(s)	32, 243, 563, 1750, 2782, 2899
SfcI	CTRYAG	6 cut(s)	784, 1575, 2313, 2618, 3378, 3404
SfoI	GGCGCC	1 cut(s)	3092
SfuI	TTCGAA	2 cut(s)	118, 407
SgfI	GCGATCGC	1 cut(s)	2362
SinI	GGWCC	2 cut(s)	279, 2449
SmiMI	CAYNNNNRTG	5 cut(s)	438, 1552, 1704, 1785, 3168
SmlI	CTYRAG	6 cut(s)	450, 1307, 1654, 2831, 3278, 3569
SmoI	CTYRAG	6 cut(s)	450, 1307, 1654, 2831, 3278, 3569
Sse8387I	CCTGCAGG	1 cut(s)	2317
SseBI	AGGCCT	1 cut(s)	2003
SsiI	CCGC	4 cut(s)	102, 187, 2713, 2738
SspDI	GGCGCC	1 cut(s)	3090
SspI	AATATT	1 cut(s)	1643
SspMI	CTAG	5 cut(s)	1118, 1766, 1997, 2735, 3009
StuI	AGGCCT	1 cut(s)	2003
StyD4I	CCNGG	8 cut(s)	48, 77, 267, 1357, 1408, 2215, 3192, 3437
StyI	CCWWGG	1 cut(s)	59
TaaI	ACNGT	9 cut(s)	166, 462, 611, 888, 971, 1568, 1913, 2133, 2533
TaiI	ACGT	4 cut(s)	1708, 2126, 2866, 3218
TaqI	TCGA	8 cut(s)	86, 118, 407, 1354, 1832, 1948, 2399, 2604
TatI	WGTACW	6 cut(s)	625, 1139, 1568, 1935, 2892, 3316
TauI	GCSGC	1 cut(s)	2716
TseFI	GTSAC	8 cut(s)	932, 1730, 1953, 2095, 2525, 2864, 3234, 3573
TseI	GCWGC	4 cut(s)	251, 357, 1105, 1108
Tsp45I	GTSAC	8 cut(s)	932, 1730, 1953, 2095, 2525, 2864, 3234, 3573
TspGWI	ACGGA	4 cut(s)	573, 1547, 2244, 2571
Tth111I	GACNNNGTC	1 cut(s)	2531
Van91I	CCANNNNNTGG	2 cut(s)	1898, 2728
Vha464I	CTTAAG	2 cut(s)	1654, 3278
VneI	GTGCAC	2 cut(s)	534, 3110
VpaK11BI	GGWCC	2 cut(s)	279, 2449
XagI	CCTNNNNNAGG	1 cut(s)	2618
XceI	RCATGY	3 cut(s)	532, 882, 3251
XmiI	GTMKAC	3 cut(s)	815, 1741, 2979
XspI	CTAG	5 cut(s)	1118, 1766, 1997, 2735, 3009
ZrmI	AGTACT	1 cut(s)	1570
Zsp2I	ATGCAT	2 cut(s)	556, 3175

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.