Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0003027

Physical Location & Seq

Genomic Coordinates Reverse (-)

46451460 .. 46462094

Gene Structure 10635 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000034625

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3600 bp

ATGGCTGTGGACACCAATTTCGCATCCTCATTGCTCCAGAATTTGAACCTCGAAGATCCACTGCTTCCTCCAACCACATGGGAATCCATCCCTTCCGAAAGCGGCCATTTCCATCTTCCAACCTCCAACTCTCACTCCCTCTACCACGCCTCCACCGTCTCCGAGGCGAGTCTGGTGCGGCTGGCGATGAATGCACTGCAAGGAGTTGAATCGTCCCTTATTAGTGTCCAAAAGCTTTCTGCTGCGTTTCGCTCCGACCCGGCCGATAGGACCTTCCATCAGGTTCCGAGTCTGTGGAGTAGGTCTTCCAGCACTCGTGCTCTGGGGAATCTTCTCCACCCCATAGGCTGCTCAGGTTTGCTGGTCTTTCTTCTCGGAAAATTCGTGGATTACTTTACCAATTTGAATGTGGAAGGTCAAAATGAAGCTCCAGCAAAACAGTGCGCTCCGTATAGTCTTGTTAATCATGCTTTTGCTGTTGCGGTGGGGAAGGTTGTGGAGGGTTACATGTGTGCTTTGGATACCTTGTATGCATCTGTGGGTGTGAGGCGGCGCTCTTCTTCAGGCTCGCCTTCTGCGGTGGGATGTCTCAACAGTGTAGTCCATTCTGAGCTTACTTTGTTGGAGCTGTATTTGCACACAAAGGAATTGAGGACTCAGATTGAATCCCTTACTAACATATGCAACTTATATCAGTTTTCTGATTGCTTCTCGGCGTCTCCTTTTGATGAGTTACATACGAAAGCCAAATCTGAGTTTTGTAAATTCTACAGAGGGGGTGATTTACTCACGTATCTATATACTCAGTTACAGGTTGCTGATCCTGCTCATCGTCCTGTACTAAAATTTCTTTTTCTTCGTACATGTGAACCATACTTCGGATTTATAAGATCATGGATATTCAAAGCTGAGATTAGCGATCCTTATGAGGAGTTTTTGGTTGAATATGTTCACTCTCCTAATCCATCTGTTGAAGCTGGTATCTCTATTGACTTCCCATTGGCAACTATTAGGGAACGAGATGGAGTTCCTGTTCCTTGTTTTTTGAAGGACTTCTTGATTCCACTTTTCAGAGCTGGTCAGCAGCTGCAAGTTCTAGTGAAATTGCTTGAATTGTGTACTTTTGTTGCCCCTAAGAACCATACTTATGAGAGTTTTCTTCCCTGCTGGAGTGGGTTTTCAAGCAATTGTCCATCTTATGCATCTCCATTGACGTTCAGCAAAGGAAATATAGAGGCCATGGTACTTTCAAGGGAATGTTATTACAAAAGGATGCAGGACCAACTCCAGAATCTTTTGACGGAATTAGAGTTCAGATTTCAACAGGTAATTTCACAAGACACACTGCCTGTTCTCTTGGATAATAGTGGAAGGAGTTCAATCATCCCAGTTTTAGTCCCACTGGATGACAGTTTTATTGCTTCTTCAACAGATGATGAAAGGGAGTCAAATGTGGTGGCTGATGATTTGGATTCAGACGAGTTAAGTACAAGAGACAATGTATGTTACACTGCAGATGCATACGAGTCATCTGAGTGTTCAAGCTCCACTATATCTGAAGAGCAAAATGTGTTCGAGCAGATGACTGAGTTCCCTAATCACATTGTAGGGGAAGAACAAAAGTATTTATCTGCTTTAAGCTTCTCAATGAGTATTCCAGTTGATACTTTGCAAAAGCCCCATGGATCTACAGATTCATGTCATATAGACAAGATTAGTAGAAGTTGTGAAAGAAAAGATGCCTTTGCGCATTCTCATCATAAAGGCATACTTACGAGTCAGATATTGGATGTTCAATTTTCAGATTGTCTCTCTGATAAGGATTGGCCGGAAAGAGATTATTTTGAGAATCAGTCTGTCATTGATATAGAGTACAAAGAAGGTCTGAAGTCACATCCAACGGATTTTGCCTCAAAGGTGAATGAAAGAATAATAGGATCGTTAAAGGAAGGTTCATCATATTTTAGAAAAAGAATCATGGATAGTAATGCTTTAATGGAAGAAGCCTTTGGCAAGGTTGAACCTCAAAAGGCCGGTTATGCTTCTGATACATTTGCATTAAAACAGTGGAAGGTTAATTACCATAACAATTTTCTCAGCATGAACCCAATGTTGACAAAAAATAATTTCCTTCACCTAACATCAAGGCCTGGAGAGAGATGGAAGACAGACCTTGGGGATTCTTTGGCTTACTTTGATTTCTCTCACATAAAAGATCCTTGTAAGGTGTTTCCGGTAAAGGTTCCTGTAGGGCTCATGGACTCTGGTGCCTCTACTACCAGTGTTAGGAGTGATCATCATCTGAAACAATGTTCTGCAGAAGCTGATGTTCTGATTGGAAGAACAATAGAGTCTGACTCTCTTCCGTTTGCAGATTCAAAGGGCCACGCCAAAGGAGATGCTACTTTAACAAATGTTTCTGGTGGTAGTTGTTGGGAGAGTTTGCTTGGTAGATTTAGTGACACTGTCATTAATAGAGTTGAAGATCGCAGAGAAAGCTTGGCGGCCACTTTTGACATACCACTGGATTTTATTATTGACACATGCCTTCTGCAGGAAATCATGCTCCAATATAAGTATGTCAGCAAGTTAACTATTAAGTTGCTTGAAGAAGGATTTGATTTGCAAGAACATTTGCTGGCTCTGCGACGATACCACTTCATGGAATTAGCAGACTGGGCAGATTTGTTTATTATGTCCCTTTGGCATCATAAATGGAGTATTACACAGGCAGATCATAGACTTTCTGAAATTCAAAGTTTTCTTGAGTCATCAGTTCAGAGGTCATCATGTGAACGTGATCATAATAAGGACAGGTTATATGTGTACCTGAAAGGACATGATGCTGTGCCTCTTTCAGCATCTGCTATTGGAGTCCATTCCTTCAACTTTCTAGGTTTGGGATATCGAGTGGACTGGCCCATCAGCATTGTTTTGACTCCTGGTGCATTGAAAATATATGCCGAGATATTTAGTTTCTTGATACAAGTGAAACTTGCTCTGTTTTCATTGACTGACGTGTGGTGCCAATTGAAGGATCTGGTCCAGTTGATTAGTCGGAATAACCACTCTGAGCAACATGAAAAGGAAGTGAGTCATTTCAATGCAATGGTGAAAATGAGGCATCAGGTCAATCACTTTGTATCTACATTACAGCAATATGTGGAGTCACAGCTATCACATGTGTCATGGTGCAGGTTTCTATATTCACTTAAGCATAAGGTCAACGATATGATGGATCTTCAGTCAGTGCACATGGCATATCTCTCAGATTCACTTCACATATGTTTCCTCTCTGATGAAACAAGACCTATAGCTTGCATCATTGAGAGCATTCTGCAGTGTGCTCTGGACTTCAGGTCTTGTCTCACTGGGGAAGTATGGAATGCAGGAACAGGTCAAGGGAATTTAATTGCAAGACACTCTGGAATCAATATATCCCAGGTTCTTTCCATAAAGCAAACGTTTGACAAAAATATGAAAGAATTGCACTTGTGTTACCTCAGATCACCTAAACATGGCGAGTTTGGACTCTCTCACTTCTGGGAATTCCTGAACTACAACAAGTATTACTCAGATGCTGCTTCCAAAGCTCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0000278 GO:0000280 GO:0000923 GO:0000930 GO:0000931 GO:0003674 GO:0005198 GO:0005200 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005813 GO:0005815 GO:0005816 GO:0005822 GO:0005825 GO:0005829 GO:0005856 GO:0006810 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007020 GO:0007049 GO:0007051 GO:0007052 GO:0007097 GO:0007098 GO:0007163 GO:0008017 GO:0008092 GO:0008150 GO:0008274 GO:0008275 GO:0008360 GO:0009987 GO:0015630 GO:0015631 GO:0016043 GO:0022402 GO:0022414 GO:0022603 GO:0022604 GO:0022607 GO:0031021 GO:0031023 GO:0031109 GO:0031122 GO:0032153 GO:0032155 GO:0032991 GO:0034453 GO:0034622 GO:0034631 GO:0043015 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044450 GO:0044464 GO:0044732 GO:0046785 GO:0046907 GO:0048285 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051179 GO:0051225 GO:0051234 GO:0051258 GO:0051298 GO:0051321 GO:0051415 GO:0051418 GO:0051640 GO:0051641 GO:0051647 GO:0051649 GO:0051656 GO:0061496 GO:0061497 GO:0065003 GO:0065007 GO:0065008 GO:0070925 GO:0071840 GO:0071957 GO:0071963 GO:0072393 GO:0090307 GO:0097435 GO:0098863 GO:0099098 GO:0099111 GO:0140014 GO:1902850 GO:1903047 GO:1990734

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Spc97_Spc98

Protein Analysis

1200

Amino Acids

135.49

Weight (kDa)

5.65

Isoelectric Point (pI)

47.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GCP_N_terminal	PF17681	63 - 373	6.9e-23	Gamma tubulin complex component N-terminal
GCP_C_terminal	PF04130	875 - 1191	1.3e-61	Gamma tubulin complex component C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003027)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G43610 AT3G43610 AT3G43610
fragaria_vesca	FvH4_3g27030 FvH4_3g27031 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990 FvH4_4g33990
malus_domestica	MD03G1162300.v1.1 MD03G1162400.v1.1 MD11G1178600.v1.1
prunus_persica	Prupe.6G151400_v2.0.a1 Prupe.6G151400_v2.0.a1 Prupe.6G151400_v2.0.a1
pyrus_communis	pycom11g15400
rosa_chinensis	RchiOBHm_Chr5g0049541
rosa_laevigata	RLG00000034625
rosa_multiflora	Rmu_co8383485.1_g000001 Rmu_sc0013032.1_g000004
rosa_roxburghii	Rroxscaffold_1G00032160
rosa_rugosa	Rorug05G0248900 Rorug05G0249000
rosa_samantha	Rh5AG325500 Rh5BG336700 Rh5CG361500 Rh5DG348800
rosa_wichuraiana	Rw5G030750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	887
Acc16I	TGCGCA	1 cut(s)	1749
Acc36I	ACCTGC	1 cut(s)	3186
AccB1I	GGYRCC	2 cut(s)	2267, 3024
AccB7I	CCANNNNNTGG	1 cut(s)	2662
AciI	CCGC	6 cut(s)	102, 178, 482, 550, 578, 2504
AclI	AACGTT	1 cut(s)	3464
AclWI	GGATC	8 cut(s)	50, 815, 914, 1693, 1945, 2210, 3045, 3246
AcoI	YGGCCR	4 cut(s)	103, 261, 1826, 2505
AcsI	RAATTY	7 cut(s)	40, 380, 764, 845, 2751, 3406, 3548
AcuI	CTGAAG	5 cut(s)	546, 1578, 1907, 3227, 3340
AcyI	GRCGYC	1 cut(s)	716
AfaI	GTAC	7 cut(s)	840, 862, 1120, 1245, 1489, 1874, 2828
AfiI	CCNNNNNNNGG	6 cut(s)	878, 2286, 2554, 2662, 3034, 3518
AflII	CTTAAG	1 cut(s)	3212
AflIII	ACRYGT	4 cut(s)	507, 863, 3018, 3181
AhdI	GACNNNNNGTC	1 cut(s)	3358
AjiI	CACGTC	1 cut(s)	3019
AjnI	CCWGG	3 cut(s)	2149, 2941, 3441
AjuI	GAANNNNNNNTTGG	2 cut(s)	1992, 2024
AloI	GAACNNNNNNTCC	4 cut(s)	1017, 1049, 1295, 1327
Alw21I	GWGCWC	3 cut(s)	322, 3255, 3349
Alw26I	GTCTC	6 cut(s)	163, 593, 723, 1488, 1814, 3371
Alw44I	GTGCAC	1 cut(s)	3251
AlwI	GGATC	8 cut(s)	50, 815, 914, 1693, 1945, 2210, 3045, 3246
AlwNI	CAGNNNCTG	4 cut(s)	1087, 2324, 2864, 3581
AoxI	GGCC	9 cut(s)	103, 261, 1236, 1826, 2031, 2147, 2383, 2505, 2918
ApaLI	GTGCAC	1 cut(s)	3251
ApeKI	GCWGC	5 cut(s)	242, 348, 1084, 1087, 3581
ApoI	RAATTY	7 cut(s)	40, 380, 764, 845, 2751, 3406, 3548
ArsI	GACNNNNNNTTYG	1 cut(s)	34
AseI	ATTAAT	1 cut(s)	2472
Asp700I	GAANNNNTTC	3 cut(s)	948, 1052, 1375
AspLEI	GCGC	3 cut(s)	446, 555, 1750
AspS9I	GGNCC	5 cut(s)	270, 1279, 2383, 2919, 3043
AsuC2I	CCSGG	1 cut(s)	260
AsuHPI	GGTGA	5 cut(s)	791, 1930, 2126, 3124, 3501
AvaII	GGWCC	3 cut(s)	270, 1279, 3043
BaeGI	GKGCMC	1 cut(s)	3255
BaeI	ACNNNNGTAYC	2 cut(s)	776, 809
BanI	GGYRCC	2 cut(s)	2267, 3024
BanII	GRGCYC	1 cut(s)	2256
BarI	GAAGNNNNNNTAC	2 cut(s)	2063, 2095
BauI	CACGAG	1 cut(s)	315
BbsI	GAAGAC	2 cut(s)	297, 2171
Bbv12I	GWGCWC	3 cut(s)	322, 3255, 3349
BbvI	GCAGC	5 cut(s)	229, 335, 1074, 1096, 3568
BccI	CCATC	9 cut(s)	95, 120, 285, 973, 1016, 1201, 2154, 2930, 3229
BcgI	CGANNNNNNTGC	2 cut(s)	157, 191
BciT130I	CCWGG	3 cut(s)	2151, 2943, 3443
BciVI	GTATCC	1 cut(s)	514
BclI	TGATCA	2 cut(s)	2293, 2800
BcnI	CCSGG	1 cut(s)	260
BcoDI	GTCTC	6 cut(s)	163, 593, 723, 1488, 1814, 3371
BfaI	CTAG	2 cut(s)	1097, 2894
BfmI	CTRYAG	8 cut(s)	769, 1512, 1689, 2247, 2316, 2552, 3312, 3338
BfoI	RGCGCY	1 cut(s)	556
BfrI	CTTAAG	1 cut(s)	3212
BfuAI	ACCTGC	1 cut(s)	3186
BfuI	GTATCC	1 cut(s)	514
BisI	GCNGC	9 cut(s)	103, 179, 243, 349, 551, 1085, 1088, 2505, 3582
BlsI	GCNGC	9 cut(s)	104, 180, 244, 350, 552, 1086, 1089, 2506, 3583
Bme1390I	CCNGG	4 cut(s)	260, 2151, 2943, 3443
Bme18I	GGWCC	3 cut(s)	270, 1279, 3043
BmeRI	GACNNNNNGTC	1 cut(s)	3358
BmgBI	CACGTC	1 cut(s)	3019
BmgT120I	GGNCC	5 cut(s)	270, 1279, 2383, 2919, 3043
BmiI	GGNNCC	4 cut(s)	285, 2244, 2269, 3026
BmrFI	CCNGG	4 cut(s)	260, 2151, 2943, 3443
BmrI	ACTGGG	3 cut(s)	1382, 2686, 3381
BmuI	ACTGGG	3 cut(s)	1382, 2686, 3381
BpiI	GAAGAC	2 cut(s)	297, 2171
BplI	GAGNNNNNCTC	2 cut(s)	2342, 2374
BpmI	CTGGAG	5 cut(s)	20, 414, 1189, 1271, 2172
Bpu10I	CCTNAGC	1 cut(s)	352
BpuEI	CTTGAG	1 cut(s)	2786
BpuMI	CCSGG	1 cut(s)	260
BsaAI	YACGTR	1 cut(s)	792
BsaBI	GATNNNNATC	1 cut(s)	2298
BsaHI	GRCGYC	1 cut(s)	716
BsaJI	CCNNGG	5 cut(s)	162, 1239, 1681, 2173, 3441
BsaWI	WCCGGW	1 cut(s)	2233
BsaXI	ACNNNNNCTCC	6 cut(s)	119, 134, 149, 164, 1017, 1047
Bsc4I	CCNNNNNNNGG	6 cut(s)	878, 2286, 2554, 2662, 3034, 3518
Bse118I	RCCGGY	1 cut(s)	2033
Bse1I	ACTGG	9 cut(s)	1388, 1407, 1658, 2280, 2529, 2681, 2921, 3046, 3376
Bse3DI	GCAATG	2 cut(s)	29, 3114
Bse8I	GATNNNNATC	1 cut(s)	2298
BseBI	CCWGG	3 cut(s)	2151, 2943, 3443
BseDI	CCNNGG	5 cut(s)	162, 1239, 1681, 2173, 3441
BseGI	GGATG	8 cut(s)	23, 87, 590, 1278, 1383, 1411, 1795, 1894
BseJI	GATNNNNATC	1 cut(s)	2298
BseLI	CCNNNNNNNGG	6 cut(s)	878, 2286, 2554, 2662, 3034, 3518
BseMI	GCAATG	2 cut(s)	29, 3114
BseNI	ACTGG	9 cut(s)	1388, 1407, 1658, 2280, 2529, 2681, 2921, 3046, 3376
BseRI	GAGGAG	1 cut(s)	944
BseSI	GKGCMC	1 cut(s)	3255
BseX3I	CGGCCG	1 cut(s)	261
BseXI	GCAGC	5 cut(s)	229, 335, 1074, 1096, 3568
BsgI	GTGCAG	1 cut(s)	3214
Bsh1285I	CGRYCG	1 cut(s)	264
BshFI	GGCC	9 cut(s)	105, 263, 1238, 1828, 2033, 2149, 2385, 2507, 2920
BshNI	GGYRCC	2 cut(s)	2267, 3024
BsiEI	CGRYCG	1 cut(s)	264
BsiHKAI	GWGCWC	3 cut(s)	322, 3255, 3349
BsiSI	CCGG	4 cut(s)	260, 1829, 2034, 2234
BslFI	GGGAC	3 cut(s)	199, 1382, 2683
BslI	CCNNNNNNNGG	6 cut(s)	878, 2286, 2554, 2662, 3034, 3518
BsmAI	GTCTC	6 cut(s)	163, 593, 723, 1488, 1814, 3371
BsmBI	CGTCTC	2 cut(s)	163, 723
BsmFI	GGGAC	3 cut(s)	199, 1382, 2683
BsmI	GAATGC	4 cut(s)	196, 1750, 3333, 3391
BsnI	GGCC	9 cut(s)	105, 263, 1238, 1828, 2033, 2149, 2385, 2507, 2920
Bsp1286I	GDGCHC	4 cut(s)	322, 2256, 3255, 3349
Bsp19I	CCATGG	2 cut(s)	1239, 1681
BspACI	CCGC	6 cut(s)	102, 178, 482, 550, 578, 2504
BspANI	GGCC	9 cut(s)	105, 263, 1238, 1828, 2033, 2149, 2385, 2507, 2920
BspLI	GGNNCC	4 cut(s)	285, 2244, 2269, 3026
BspMAI	CTGCAG	4 cut(s)	1516, 2320, 2556, 3342
BspMI	ACCTGC	1 cut(s)	3186
BspPI	GGATC	8 cut(s)	50, 815, 914, 1693, 1945, 2210, 3045, 3246
BspQI	GCTCTTC	2 cut(s)	562, 1554
BspT107I	GGYRCC	2 cut(s)	2267, 3024
BspTI	CTTAAG	1 cut(s)	3212
BsrDI	GCAATG	2 cut(s)	29, 3114
BsrFI	RCCGGY	1 cut(s)	2033
BsrI	ACTGG	9 cut(s)	1388, 1407, 1658, 2280, 2529, 2681, 2921, 3046, 3376
BssAI	RCCGGY	1 cut(s)	2033
BssECI	CCNNGG	5 cut(s)	162, 1239, 1681, 2173, 3441
BssNI	GRCGYC	1 cut(s)	716
BssSI	CACGAG	1 cut(s)	315
BssT1I	CCWWGG	3 cut(s)	1239, 1681, 2173
Bst2BI	CACGAG	1 cut(s)	315
Bst2UI	CCWGG	3 cut(s)	2151, 2943, 3443
Bst4CI	ACNGT	6 cut(s)	157, 441, 596, 1412, 2067, 2467
Bst6I	CTCTTC	3 cut(s)	562, 1554, 2367
BstACI	GRCGYC	1 cut(s)	716
BstAFI	CTTAAG	1 cut(s)	3212
BstBAI	YACGTR	1 cut(s)	792
BstC8I	GCNNGC	4 cut(s)	183, 569, 2640, 3319
BstDSI	CCRYGG	2 cut(s)	1239, 1681
BstENI	CCTNNNNNAGG	1 cut(s)	2552
BstF5I	GGATG	8 cut(s)	23, 87, 590, 1278, 1383, 1411, 1795, 1894
BstH2I	RGCGCY	1 cut(s)	556
BstHHI	GCGC	3 cut(s)	446, 555, 1750
BstMAI	GTCTC	6 cut(s)	163, 593, 723, 1488, 1814, 3371
BstMCI	CGRYCG	1 cut(s)	264
BstMWI	GCNNNNNNNGC	8 cut(s)	191, 634, 824, 2039, 2496, 2644, 2678, 3590
BstNI	CCWGG	3 cut(s)	2151, 2943, 3443
BstNSI	RCATGY	4 cut(s)	511, 867, 2547, 3185
BstSCI	CCNGG	4 cut(s)	258, 2149, 2941, 3441
BstSFI	CTRYAG	8 cut(s)	769, 1512, 1689, 2247, 2316, 2552, 3312, 3338
BstSLI	GKGCMC	1 cut(s)	3255
BstV1I	GCAGC	5 cut(s)	229, 335, 1074, 1096, 3568
BstV2I	GAAGAC	2 cut(s)	297, 2171
BstX2I	RGATCY	5 cut(s)	55, 1685, 2215, 3037, 3238
BstXI	CCANNNNNNTGG	1 cut(s)	78
BstYI	RGATCY	5 cut(s)	55, 1685, 2215, 3037, 3238
BstZI	CGGCCG	1 cut(s)	261
BsuI	GTATCC	1 cut(s)	514
BsuRI	GGCC	9 cut(s)	105, 263, 1238, 1828, 2033, 2149, 2385, 2507, 2920
BtgI	CCRYGG	2 cut(s)	1239, 1681
BtgZI	GCGATG	1 cut(s)	200
BtrI	CACGTC	1 cut(s)	3019
BtsCI	GGATG	8 cut(s)	23, 87, 590, 1278, 1383, 1411, 1795, 1894
BtsI	GCAGTG	5 cut(s)	59, 194, 1343, 1509, 3347
BveI	ACCTGC	1 cut(s)	3186
Cac8I	GCNNGC	4 cut(s)	183, 569, 2640, 3319
CaiI	CAGNNNCTG	4 cut(s)	1087, 2324, 2864, 3581
CfoI	GCGC	3 cut(s)	446, 555, 1750
Cfr10I	RCCGGY	1 cut(s)	2033
Cfr13I	GGNCC	5 cut(s)	270, 1279, 2383, 2919, 3043
CseI	GACGC	1 cut(s)	705
Csp6I	GTAC	7 cut(s)	839, 861, 1119, 1244, 1488, 1873, 2827
CspCI	CAANNNNNGTGG	2 cut(s)	1437, 1472
CviQI	GTAC	7 cut(s)	839, 861, 1119, 1244, 1488, 1873, 2827
DriI	GACNNNNNGTC	1 cut(s)	3358
EaeI	YGGCCR	4 cut(s)	103, 261, 1826, 2505
EagI	CGGCCG	1 cut(s)	261
Eam1104I	CTCTTC	3 cut(s)	562, 1554, 2367
Eam1105I	GACNNNNNGTC	1 cut(s)	3358
EarI	CTCTTC	3 cut(s)	562, 1554, 2367
EclXI	CGGCCG	1 cut(s)	261
Eco130I	CCWWGG	3 cut(s)	1239, 1681, 2173
Eco147I	AGGCCT	1 cut(s)	2149
Eco24I	GRGCYC	1 cut(s)	2256
Eco32I	GATATC	1 cut(s)	2906
Eco47I	GGWCC	3 cut(s)	270, 1279, 3043
Eco52I	CGGCCG	1 cut(s)	261
Eco57I	CTGAAG	5 cut(s)	546, 1578, 1907, 3227, 3340
EcoNI	CCTNNNNNAGG	1 cut(s)	2552
EcoO109I	RGGNCCY	1 cut(s)	270
EcoRI	GAATTC	1 cut(s)	3548
EcoRII	CCWGG	3 cut(s)	2149, 2941, 3441
EcoRV	GATATC	1 cut(s)	2906
EcoT14I	CCWWGG	3 cut(s)	1239, 1681, 2173
EcoT22I	ATGCAT	3 cut(s)	535, 1204, 1522
EcoT38I	GRGCYC	1 cut(s)	2256
ErhI	CCWWGG	3 cut(s)	1239, 1681, 2173
Esp3I	CGTCTC	2 cut(s)	163, 723
FalI	AAGNNNNNCTT	6 cut(s)	1040, 1072, 1755, 1787, 2979, 3011
FaqI	GGGAC	3 cut(s)	199, 1382, 2683
FauNDI	CATATG	2 cut(s)	680, 3284
FbaI	TGATCA	2 cut(s)	2293, 2800
Fnu4HI	GCNGC	9 cut(s)	103, 179, 243, 349, 551, 1085, 1088, 2505, 3582
FokI	GGATG	8 cut(s)	10, 74, 597, 1285, 1370, 1418, 1802, 1881
FriOI	GRGCYC	1 cut(s)	2256
Fsp4HI	GCNGC	9 cut(s)	103, 179, 243, 349, 551, 1085, 1088, 2505, 3582
FspBI	CTAG	2 cut(s)	1097, 2894
FspI	TGCGCA	1 cut(s)	1749
GlaI	GCGC	3 cut(s)	445, 554, 1749
GluI	GCNGC	9 cut(s)	103, 179, 243, 349, 551, 1085, 1088, 2505, 3582
GsuI	CTGGAG	5 cut(s)	20, 414, 1189, 1271, 2172
HaeII	RGCGCY	1 cut(s)	556
HaeIII	GGCC	9 cut(s)	105, 263, 1238, 1828, 2033, 2149, 2385, 2507, 2920
HapII	CCGG	4 cut(s)	260, 1829, 2034, 2234
HgaI	GACGC	1 cut(s)	705
HhaI	GCGC	3 cut(s)	446, 555, 1750
Hin1I	GRCGYC	1 cut(s)	716
Hin6I	GCGC	3 cut(s)	444, 553, 1748
HinP1I	GCGC	3 cut(s)	444, 553, 1748
HincII	GTYRAC	3 cut(s)	2115, 2592, 3226
HindII	GTYRAC	3 cut(s)	2115, 2592, 3226
HindIII	AAGCTT	3 cut(s)	233, 1639, 2497
HpaI	GTTAAC	1 cut(s)	2592
HpaII	CCGG	4 cut(s)	260, 1829, 2034, 2234
HphI	GGTGA	5 cut(s)	791, 1930, 2126, 3124, 3501
Hpy188III	TCNNGA	8 cut(s)	37, 1057, 1288, 2765, 2980, 3350, 3426, 3553
Hpy99I	CGWCG	1 cut(s)	2652
HpyCH4III	ACNGT	6 cut(s)	157, 441, 596, 1412, 2067, 2467
HpyCH4IV	ACGT	5 cut(s)	791, 1214, 2797, 3018, 3464
HpyF10VI	GCNNNNNNNGC	8 cut(s)	191, 634, 824, 2039, 2496, 2644, 2678, 3590
HpySE526I	ACGT	5 cut(s)	791, 1214, 2797, 3018, 3464
Hsp92I	GRCGYC	1 cut(s)	716
HspAI	GCGC	3 cut(s)	444, 553, 1748
Ksp22I	TGATCA	2 cut(s)	2293, 2800
KspAI	GTTAAC	1 cut(s)	2592
LguI	GCTCTTC	2 cut(s)	562, 1554
LmnI	GCTCC	7 cut(s)	39, 257, 433, 451, 625, 1550, 2571
Lsp1109I	GCAGC	5 cut(s)	229, 335, 1074, 1096, 3568
MaeI	CTAG	2 cut(s)	1097, 2894
MaeII	ACGT	5 cut(s)	791, 1214, 2797, 3018, 3464
MaeIII	GTNAC	8 cut(s)	503, 732, 807, 1505, 1890, 2459, 3168, 3497
MfeI	CAATTG	2 cut(s)	1186, 3029
MflI	RGATCY	5 cut(s)	55, 1685, 2215, 3037, 3238
MhlI	GDGCHC	4 cut(s)	322, 2256, 3255, 3349
MmeI	TCCRAC	7 cut(s)	95, 143, 150, 279, 603, 1922, 3038
Mph1103I	ATGCAT	3 cut(s)	535, 1204, 1522
MroXI	GAANNNNTTC	3 cut(s)	948, 1052, 1375
MslI	CAYNNNNRTG	3 cut(s)	1146, 1534, 3102
MspA1I	CMGCKG	1 cut(s)	1087
MspCI	CTTAAG	1 cut(s)	3212
MspI	CCGG	4 cut(s)	260, 1829, 2034, 2234
MspR9I	CCNGG	4 cut(s)	260, 2151, 2943, 3443
MunI	CAATTG	2 cut(s)	1186, 3029
Mva1269I	GAATGC	4 cut(s)	196, 1750, 3333, 3391
MvaI	CCWGG	3 cut(s)	2151, 2943, 3443
MwoI	GCNNNNNNNGC	8 cut(s)	191, 634, 824, 2039, 2496, 2644, 2678, 3590
NciI	CCSGG	1 cut(s)	260
NcoI	CCATGG	2 cut(s)	1239, 1681
NdeI	CATATG	2 cut(s)	680, 3284
NlaIV	GGNNCC	4 cut(s)	285, 2244, 2269, 3026
NmeAIII	GCCGAG	2 cut(s)	692, 2989
NmuCI	GTSAC	3 cut(s)	1890, 2459, 3168
NsbI	TGCGCA	1 cut(s)	1749
NsiI	ATGCAT	3 cut(s)	535, 1204, 1522
NspI	RCATGY	4 cut(s)	511, 867, 2547, 3185
PceI	AGGCCT	1 cut(s)	2149
PciI	ACATGT	3 cut(s)	507, 863, 3181
PciSI	GCTCTTC	2 cut(s)	562, 1554
PcsI	WCGNNNNNNNCGW	2 cut(s)	153, 381
PctI	GAATGC	4 cut(s)	196, 1750, 3333, 3391
PdmI	GAANNNNTTC	3 cut(s)	948, 1052, 1375
PflFI	GACNNNGTC	1 cut(s)	2465
PflMI	CCANNNNNTGG	1 cut(s)	2662
PkrI	GCNGC	9 cut(s)	104, 180, 244, 350, 552, 1086, 1089, 2506, 3583
Ppu21I	YACGTR	1 cut(s)	792
PpuMI	RGGWCCY	1 cut(s)	270
PscI	ACATGT	3 cut(s)	507, 863, 3181
PshBI	ATTAAT	1 cut(s)	2472
PsiI	TTATAA	1 cut(s)	887
Psp1406I	AACGTT	1 cut(s)	3464
Psp5II	RGGWCCY	1 cut(s)	270
Psp6I	CCWGG	3 cut(s)	2149, 2941, 3441
PspGI	CCWGG	3 cut(s)	2149, 2941, 3441
PspN4I	GGNNCC	4 cut(s)	285, 2244, 2269, 3026
PspPI	GGNCC	5 cut(s)	270, 1279, 2383, 2919, 3043
PspPPI	RGGWCCY	1 cut(s)	270
PstI	CTGCAG	4 cut(s)	1516, 2320, 2556, 3342
PstNI	CAGNNNCTG	4 cut(s)	1087, 2324, 2864, 3581
PsuI	RGATCY	5 cut(s)	55, 1685, 2215, 3037, 3238
PsyI	GACNNNGTC	1 cut(s)	2465
PvuII	CAGCTG	1 cut(s)	1087
RsaI	GTAC	7 cut(s)	840, 862, 1120, 1245, 1489, 1874, 2828
RsaNI	GTAC	7 cut(s)	839, 861, 1119, 1244, 1488, 1873, 2827
RseI	CAYNNNNRTG	3 cut(s)	1146, 1534, 3102
SapI	GCTCTTC	2 cut(s)	562, 1554
SatI	GCNGC	9 cut(s)	103, 179, 243, 349, 551, 1085, 1088, 2505, 3582
Sau96I	GGNCC	5 cut(s)	270, 1279, 2383, 2919, 3043
ScrFI	CCNGG	4 cut(s)	260, 2151, 2943, 3443
SduI	GDGCHC	4 cut(s)	322, 2256, 3255, 3349
SfcI	CTRYAG	8 cut(s)	769, 1512, 1689, 2247, 2316, 2552, 3312, 3338
SinI	GGWCC	3 cut(s)	270, 1279, 3043
SmiMI	CAYNNNNRTG	3 cut(s)	1146, 1534, 3102
SmlI	CTYRAG	2 cut(s)	2765, 3212
SmoI	CTYRAG	2 cut(s)	2765, 3212
SseBI	AGGCCT	1 cut(s)	2149
SsiI	CCGC	6 cut(s)	102, 178, 482, 550, 578, 2504
SspMI	CTAG	2 cut(s)	1097, 2894
StuI	AGGCCT	1 cut(s)	2149
StyD4I	CCNGG	4 cut(s)	258, 2149, 2941, 3441
StyI	CCWWGG	3 cut(s)	1239, 1681, 2173
TaaI	ACNGT	6 cut(s)	157, 441, 596, 1412, 2067, 2467
TaiI	ACGT	5 cut(s)	794, 1217, 2800, 3021, 3467
TaqI	TCGA	3 cut(s)	51, 1575, 2908
TatI	WGTACW	4 cut(s)	838, 1118, 1487, 1872
TauI	GCSGC	4 cut(s)	105, 181, 553, 2507
TseFI	GTSAC	3 cut(s)	1890, 2459, 3168
TseI	GCWGC	5 cut(s)	242, 348, 1084, 1087, 3581
Tsp45I	GTSAC	3 cut(s)	1890, 2459, 3168
TspGWI	ACGGA	4 cut(s)	438, 1316, 1916, 2355
Tth111I	GACNNNGTC	1 cut(s)	2465
Van91I	CCANNNNNTGG	1 cut(s)	2662
Vha464I	CTTAAG	1 cut(s)	3212
VneI	GTGCAC	1 cut(s)	3251
VpaK11BI	GGWCC	3 cut(s)	270, 1279, 3043
VspI	ATTAAT	1 cut(s)	2472
XagI	CCTNNNNNAGG	1 cut(s)	2552
XapI	RAATTY	7 cut(s)	40, 380, 764, 845, 2751, 3406, 3548
XceI	RCATGY	4 cut(s)	511, 867, 2547, 3185
XcmI	CCANNNNNNNNNTGG	1 cut(s)	406
XmnI	GAANNNNTTC	3 cut(s)	948, 1052, 1375
XspI	CTAG	2 cut(s)	1097, 2894
Zsp2I	ATGCAT	3 cut(s)	535, 1204, 1522

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.