MD03G1257000.v1.1

Peptidyl-prolyl cis-trans isomerase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0002895
Physical Location & Seq
Reverse (-)
34422870 .. 34433514
10645 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1257000.v1.1.491

Sequence Viewer

Length: 2100 bp
ATGTTCTTGAGACAGGAAGATATGAGCAAGAAAAAGAACCCTTGCGTCTTCTTAGATGTATCAATTGATAGGGACCCTGTGGAACAAATTGTTATTGAGCTTTTTGCTGATGTTGTTCCTAAGACGGCAGAGAATTTCAGGGCTCTCTGTACAGGTGAGAAGGGCATTGGAAAGTCTACAGGAAAACTTCTCCATTACAAAGGATCAACATTTCATCGAGTAATAAAAGGATTTATGGCCCAGGGCGGTGATTTTTCAAATGGAAATGGCACTGGTGGAGAAAGTATTTATGGAGGAAAGTTTGCAGATGAAAATTTTAAATTGAAGCATGATAGACCTGGTCTTTTGTCCATGGCAAATGCGGGTCCAAACACAAATGGTTCCCAGTTCTTTATAATCTTCAGGCGCCAGCCTCATCTGGATGGGAAACATGTTGTTTTTGGAAAAGTTGTGAAGGGAATGGATGTAGTTGAGAAAATTGAGAAAGTGGGAACTGCTGATGGAAAACCTTTAGAAACCGTGAAAATTGTGGATTGTGGTGAATTCTCAGAAATTAAAATCCCTGTTGCAACAGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGGTAAAAAGAGGAAATCAGGAAAGGTTCCATCCTCTGAGGATAGTTCTGATGAGGAAGCTAGAGGAAGGCGTAACAAATCCTTGAAGGAAAGAACTAAGAGAAGAAGATATTCTTCATCTGACTCCCACAGCTCAGAGTCTGAGTCGGATTCTTCAGATTCTGATTCTGATTCTGATTCTTCTCTATCTGACTCAAGTTCGTCTAGTGATGGAAGGCGCAGGAAGAGGAAATCTGTTAAAAAAGGTAAGCACCAGCGTTCAAGGAAAAGAAGAGATGTGAAAAAAAAGAGGAAGAGCGGGCGGTATTCCAAACGATCAAGGCACAAGTCAAAACGGAGATCGGAAAGTTCAAGTGACACAGAAAGTGAGATTTCTAGAAGCGGCAGAAGCAGTTCTGATGATGATAAAGATGGTCGTCATGTTTCTTCTCGTAAAACCAGCAACTTAAAGCATGCAGAAAAAAAACTTCCAACCAATGATGTGGGAAAAGAACCCCCTCTAGTGAAAAAAATTGTTGTTGAACAGAGGCATAATCATGGTAGGAAGAAAACTGAGGGCAACGCATCCCAAGAAGAAGGTGAATTATCTCCAAAGAATGATGCACCTTTCAACAATGGGCATAATGCAGAAGCTAAAACTGCTAATCAGAACTCCGACTCAGATGACTCAAACATCTCTAGAAGTCCAACTCGCAAAAGGAGGTCAAGAAACAGCCCTAGGAGCATGCCAAGCCCAAGTCCTGATAGAATTCCTAGTGGAAGTCCTCCGAGGAGTACTGGCGAGAAAAACAGAGCTAGGAGTCCATCGCGTAGCCCTGTCCGCAGAGCTCCTGAACCTTCTACCACCAATCATGAAGGGGGTTTATCAAGAAGCACTTCACCAAATGGAAATTCAAAGCGCGTTAGAAAAGGGCGTGGCTTCACTGACCGCTTTGCCTTTGCACGTCGTTACCGTACTCCATCTCCAGAGCGTTCACTCCGTAATTCCTATCGTAATAATGGAAGAGACACTTATAGAAGTAACCGTGATAGGTACTCAAGCTATAGAAATTTTTCTGAGCGCTCACCTCGTAGACGTTTGCGAAGCCCACCGAAAGGTGGAAGCCCTCCGAGATACAGGAGCAGGAGAAGTCGAAGTAGGAGCATTTCCCGCAGTCCTGGTGGTTATCGTGTCCGTAATAGGGACCGCAGCCGCAGCCGCAGCCGCAGCCGCAGCCGCAGCCGCAGCCGCAGCCGCAGCCGTAGTCTGAGTCCAGTTGACCGACCTCCTGTAAGTGATAGACTAAAATCCCGCCTTGGACCCCGAATTGGTAATCAGCACTCTCCAGACAGAGGTAGGCTTAAGTCCAGGTCAAGGAGCCCAAGGCCCTCTTATTCCAGATCTCCAGATGCTACTCCTAAGCGTCGTAATCGAACTCCTAGGTCTCCGAGCAGGTCAAGATCAAGCTCCCCGCCTGCTCAAAGGGGGTTGGTTTCATATGACGATATCAGTCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pro_isomerase

Protein Analysis

700

Amino Acids

78.74

Weight (kDa)

11.1

Isoelectric Point (pI)

90.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pro_isomerase PF00160 20 - 180 9.9e-52 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 395
Acc36I ACCTGC 1 cut(s) 2025
AccB1I GGYRCC 1 cut(s) 405
AccBSI CCGCTC 1 cut(s) 900
AccI GTMKAC 2 cut(s) 176, 1675
AccII CGCG 2 cut(s) 1411, 1503
AclWI GGATC 1 cut(s) 211
AcsI RAATTY 6 cut(s) 133, 313, 542, 1350, 1492, 1651
AcuI CTGAAG 2 cut(s) 385, 741
AcyI GRCGYC 1 cut(s) 406
AfaI GTAC 4 cut(s) 151, 1378, 1558, 1637
AfeI AGCGCT 1 cut(s) 1664
AfiI CCNNNNNNNGG 6 cut(s) 1697, 1700, 1783, 1910, 1934, 1956
AflII CTTAAG 1 cut(s) 1943
AflIII ACRYGT 1 cut(s) 430
AgsI TTSAA 8 cut(s) 258, 325, 688, 864, 954, 1124, 1213, 1497
AjiI CACGTC 1 cut(s) 1547
AjnI CCWGG 4 cut(s) 240, 337, 1759, 1949
AjuI GAANNNNNNNTTGG 2 cut(s) 1477, 1509
AluBI AGCT 8 cut(s) 100, 662, 735, 1235, 1397, 1430, 1644, 2049
AluI AGCT 8 cut(s) 100, 662, 735, 1235, 1397, 1430, 1644, 2049
Alw21I GWGCWC 1 cut(s) 1432
Alw26I GTCTC 3 cut(s) 4, 1602, 2031
AlwI GGATC 1 cut(s) 211
AlwNI CAGNNNCTG 2 cut(s) 743, 764
Aor51HI AGCGCT 1 cut(s) 1664
AoxI GGCC 2 cut(s) 237, 1967
ApeKI GCWGC 9 cut(s) 1791, 1797, 1803, 1809, 1815, 1821, 1827, 1833, 1839
ApoI RAATTY 6 cut(s) 133, 313, 542, 1350, 1492, 1651
Asp700I GAANNNNTTC 4 cut(s) 712, 994, 1477, 1654
AspA2I CCTAGG 2 cut(s) 1319, 2021
AspLEI GCGC 4 cut(s) 408, 822, 1503, 1665
AspS9I GGNCC 6 cut(s) 73, 238, 365, 1786, 1901, 1968
AsuHPI GGTGA 6 cut(s) 167, 260, 551, 1193, 1473, 1659
AvaII GGWCC 4 cut(s) 73, 365, 1786, 1901
AvrII CCTAGG 2 cut(s) 1319, 2021
BanI GGYRCC 1 cut(s) 405
BanII GRGCYC 3 cut(s) 145, 1432, 1964
BbsI GAAGAC 1 cut(s) 40
Bbv12I GWGCWC 1 cut(s) 1432
BbvI GCAGC 9 cut(s) 1803, 1809, 1815, 1821, 1827, 1833, 1839, 1845, 1851
BccI CCATC 7 cut(s) 416, 494, 640, 806, 1007, 1414, 1570
BceAI ACGGC 2 cut(s) 141, 1827
BciT130I CCWGG 4 cut(s) 242, 339, 1761, 1951
BcoDI GTCTC 3 cut(s) 4, 1602, 2031
BfaI CTAG 9 cut(s) 663, 807, 978, 1103, 1281, 1320, 1356, 1398, 2022
BfmI CTRYAG 2 cut(s) 177, 1645
BfoI RGCGCY 2 cut(s) 409, 1666
BfrI CTTAAG 1 cut(s) 1943
BfuAI ACCTGC 1 cut(s) 2025
BglII AGATCT 1 cut(s) 1982
BlnI CCTAGG 2 cut(s) 1319, 2021
BmcAI AGTACT 1 cut(s) 1378
Bme1390I CCNGG 4 cut(s) 242, 339, 1761, 1951
Bme18I GGWCC 4 cut(s) 73, 365, 1786, 1901
BmgBI CACGTC 1 cut(s) 1547
BmgT120I GGNCC 6 cut(s) 73, 238, 365, 1786, 1901, 1968
BmiI GGNNCC 9 cut(s) 74, 75, 366, 382, 407, 630, 1787, 1903, 1961
BmrFI CCNGG 4 cut(s) 242, 339, 1761, 1951
BmrI ACTGGG 1 cut(s) 379
BmsI GCATC 3 cut(s) 1175, 1192, 1981
BmuI ACTGGG 1 cut(s) 379
BpiI GAAGAC 1 cut(s) 40
BpmI CTGGAG 3 cut(s) 1551, 1911, 1971
Bpu10I CCTNAGC 1 cut(s) 2001
BpuEI CTTGAG 3 cut(s) 28, 781, 1624
BsaHI GRCGYC 1 cut(s) 406
BsaI GGTCTC 1 cut(s) 2031
BsaJI CCNNGG 8 cut(s) 240, 241, 351, 1319, 1370, 1897, 1964, 2021
BsaXI ACNNNNNCTCC 2 cut(s) 1549, 1579
Bsc4I CCNNNNNNNGG 6 cut(s) 1697, 1700, 1783, 1910, 1934, 1956
Bse1I ACTGG 4 cut(s) 277, 385, 1384, 1856
BseBI CCWGG 4 cut(s) 242, 339, 1761, 1951
BseDI CCNNGG 8 cut(s) 240, 241, 351, 1319, 1370, 1897, 1964, 2021
BseGI GGATG 4 cut(s) 427, 469, 632, 1166
BseLI CCNNNNNNNGG 6 cut(s) 1697, 1700, 1783, 1910, 1934, 1956
BseMII CTCAG 8 cut(s) 561, 630, 735, 750, 1146, 1275, 1650, 1841
BseNI ACTGG 4 cut(s) 277, 385, 1384, 1856
BseRI GAGGAG 1 cut(s) 1387
BseXI GCAGC 9 cut(s) 1803, 1809, 1815, 1821, 1827, 1833, 1839, 1845, 1851
Bsh1236I CGCG 2 cut(s) 1411, 1503
BshFI GGCC 2 cut(s) 239, 1969
BshNI GGYRCC 1 cut(s) 405
BsiHKAI GWGCWC 1 cut(s) 1432
BslFI GGGAC 2 cut(s) 86, 1799
BslI CCNNNNNNNGG 6 cut(s) 1697, 1700, 1783, 1910, 1934, 1956
BsmAI GTCTC 3 cut(s) 4, 1602, 2031
BsmFI GGGAC 2 cut(s) 86, 1799
BsnI GGCC 2 cut(s) 239, 1969
Bso31I GGTCTC 1 cut(s) 2031
Bsp1286I GDGCHC 3 cut(s) 145, 1432, 1964
Bsp1407I TGTACA 1 cut(s) 149
Bsp143I GATC 5 cut(s) 203, 917, 941, 1982, 2042
Bsp19I CCATGG 1 cut(s) 351
BspANI GGCC 2 cut(s) 239, 1969
BspCNI CTCAG 8 cut(s) 560, 631, 736, 749, 1147, 1274, 1651, 1842
BspFNI CGCG 2 cut(s) 1411, 1503
BspHI TCATGA 1 cut(s) 1453
BspLI GGNNCC 9 cut(s) 74, 75, 366, 382, 407, 630, 1787, 1903, 1961
BspMI ACCTGC 1 cut(s) 2025
BspPI GGATC 1 cut(s) 211
BspQI GCTCTTC 1 cut(s) 890
BspT107I GGYRCC 1 cut(s) 405
BspTI CTTAAG 1 cut(s) 1943
BspTNI GGTCTC 1 cut(s) 2031
BsrBI CCGCTC 1 cut(s) 900
BsrGI TGTACA 1 cut(s) 149
BsrI ACTGG 4 cut(s) 277, 385, 1384, 1856
BssECI CCNNGG 8 cut(s) 240, 241, 351, 1319, 1370, 1897, 1964, 2021
BssMI GATC 5 cut(s) 203, 917, 941, 1982, 2042
BssNI GRCGYC 1 cut(s) 406
BssT1I CCWWGG 5 cut(s) 351, 1319, 1897, 1964, 2021
Bst2UI CCWGG 4 cut(s) 242, 339, 1761, 1951
Bst4CI ACNGT 3 cut(s) 520, 1556, 1628
Bst6I CTCTTC 4 cut(s) 821, 868, 890, 1600
BstACI GRCGYC 1 cut(s) 406
BstAFI CTTAAG 1 cut(s) 1943
BstAUI TGTACA 1 cut(s) 149
BstC8I GCNNGC 5 cut(s) 410, 902, 1056, 1328, 2058
BstDSI CCRYGG 1 cut(s) 351
BstF5I GGATG 4 cut(s) 427, 469, 632, 1166
BstFNI CGCG 2 cut(s) 1411, 1503
BstH2I RGCGCY 2 cut(s) 409, 1666
BstHHI GCGC 4 cut(s) 408, 822, 1503, 1665
BstKTI GATC 5 cut(s) 206, 920, 944, 1985, 2045
BstMAI GTCTC 3 cut(s) 4, 1602, 2031
BstMBI GATC 5 cut(s) 203, 917, 941, 1982, 2042
BstNI CCWGG 4 cut(s) 242, 339, 1761, 1951
BstNSI RCATGY 3 cut(s) 434, 1058, 1330
BstSCI CCNGG 4 cut(s) 240, 337, 1759, 1949
BstSFI CTRYAG 2 cut(s) 177, 1645
BstUI CGCG 2 cut(s) 1411, 1503
BstV1I GCAGC 9 cut(s) 1803, 1809, 1815, 1821, 1827, 1833, 1839, 1845, 1851
BstV2I GAAGAC 1 cut(s) 40
BstX2I RGATCY 1 cut(s) 1982
BstXI CCANNNNNNTGG 1 cut(s) 1084
BstYI RGATCY 1 cut(s) 1982
BsuRI GGCC 2 cut(s) 239, 1969
BtgI CCRYGG 1 cut(s) 351
BtgZI GCGATG 1 cut(s) 1392
BtrI CACGTC 1 cut(s) 1547
BtsCI GGATG 4 cut(s) 427, 469, 632, 1166
BtsIMutI CAGTG 2 cut(s) 270, 1524
BveI ACCTGC 1 cut(s) 2025
Cac8I GCNNGC 5 cut(s) 410, 902, 1056, 1328, 2058
CaiI CAGNNNCTG 2 cut(s) 743, 764
CciI TCATGA 1 cut(s) 1453
CfoI GCGC 4 cut(s) 408, 822, 1503, 1665
Cfr13I GGNCC 6 cut(s) 73, 238, 365, 1786, 1901, 1968
CseI GACGC 2 cut(s) 34, 1994
CsiI ACCWGGT 1 cut(s) 337
Csp6I GTAC 4 cut(s) 150, 1377, 1557, 1636
CviAII CATG 8 cut(s) 329, 352, 431, 1022, 1055, 1139, 1327, 1454
CviQI GTAC 4 cut(s) 150, 1377, 1557, 1636
DinI GGCGCC 1 cut(s) 407
DpnI GATC 5 cut(s) 205, 919, 943, 1984, 2044
DpnII GATC 5 cut(s) 203, 917, 941, 1982, 2042
DraI TTTAAA 1 cut(s) 319
Eam1104I CTCTTC 4 cut(s) 821, 868, 890, 1600
EarI CTCTTC 4 cut(s) 821, 868, 890, 1600
Ecl136II GAGCTC 1 cut(s) 1430
Eco130I CCWWGG 5 cut(s) 351, 1319, 1897, 1964, 2021
Eco24I GRGCYC 3 cut(s) 145, 1432, 1964
Eco31I GGTCTC 1 cut(s) 2031
Eco32I GATATC 1 cut(s) 2089
Eco47I GGWCC 4 cut(s) 73, 365, 1786, 1901
Eco47III AGCGCT 1 cut(s) 1664
Eco53kI GAGCTC 1 cut(s) 1430
Eco57I CTGAAG 2 cut(s) 385, 741
EcoICRI GAGCTC 1 cut(s) 1430
EcoO109I RGGNCCY 2 cut(s) 73, 1968
EcoRI GAATTC 2 cut(s) 542, 1350
EcoRII CCWGG 4 cut(s) 240, 337, 1759, 1949
EcoRV GATATC 1 cut(s) 2089
EcoT14I CCWWGG 5 cut(s) 351, 1319, 1897, 1964, 2021
EcoT38I GRGCYC 3 cut(s) 145, 1432, 1964
EgeI GGCGCC 1 cut(s) 407
EheI GGCGCC 1 cut(s) 407
ErhI CCWWGG 5 cut(s) 351, 1319, 1897, 1964, 2021
FaeI CATG 8 cut(s) 332, 355, 434, 1025, 1058, 1142, 1330, 1457
FalI AAGNNNNNCTT 8 cut(s) 700, 732, 1462, 1494, 1597, 1629, 1957, 1989
FaqI GGGAC 2 cut(s) 86, 1799
FatI CATG 8 cut(s) 328, 351, 430, 1021, 1054, 1138, 1326, 1453
FauI CCCGC 5 cut(s) 355, 893, 1760, 1901, 2061
FauNDI CATATG 1 cut(s) 2080
FblI GTMKAC 2 cut(s) 176, 1675
FokI GGATG 4 cut(s) 434, 476, 619, 1153
FriOI GRGCYC 3 cut(s) 145, 1432, 1964
FspBI CTAG 9 cut(s) 663, 807, 978, 1103, 1281, 1320, 1356, 1398, 2022
GlaI GCGC 4 cut(s) 407, 821, 1502, 1664
GsuI CTGGAG 3 cut(s) 1551, 1911, 1971
HaeII RGCGCY 2 cut(s) 409, 1666
HaeIII GGCC 2 cut(s) 239, 1969
HgaI GACGC 2 cut(s) 34, 1994
HhaI GCGC 4 cut(s) 408, 822, 1503, 1665
Hin1I GRCGYC 1 cut(s) 406
Hin1II CATG 8 cut(s) 332, 355, 434, 1025, 1058, 1142, 1330, 1457
Hin6I GCGC 4 cut(s) 406, 820, 1501, 1663
HinP1I GCGC 4 cut(s) 406, 820, 1501, 1663
HincII GTYRAC 1 cut(s) 1861
HindII GTYRAC 1 cut(s) 1861
HphI GGTGA 6 cut(s) 167, 260, 551, 1193, 1473, 1659
Hpy166II GTNNAC 4 cut(s) 177, 1577, 1676, 1861
Hpy8I GTNNAC 4 cut(s) 177, 1577, 1676, 1861
Hpy99I CGWCG 2 cut(s) 1551, 2010
HpyAV CCTTC 8 cut(s) 154, 448, 663, 682, 810, 1172, 1449, 1451
HpyCH4III ACNGT 3 cut(s) 520, 1556, 1628
HpyCH4IV ACGT 2 cut(s) 1546, 1678
HpyCH4V TGCA 6 cut(s) 305, 569, 1058, 1205, 1229, 1544
HpySE526I ACGT 2 cut(s) 1546, 1678
Hsp92I GRCGYC 1 cut(s) 406
Hsp92II CATG 8 cut(s) 332, 355, 434, 1025, 1058, 1142, 1330, 1457
HspAI GCGC 4 cut(s) 406, 820, 1501, 1663
KasI GGCGCC 1 cut(s) 405
KflI GGGWCCC 1 cut(s) 73
Kzo9I GATC 5 cut(s) 203, 917, 941, 1982, 2042
LguI GCTCTTC 1 cut(s) 890
LmnI GCTCC 6 cut(s) 1323, 1435, 1722, 1743, 1959, 2054
Lsp1109I GCAGC 9 cut(s) 1803, 1809, 1815, 1821, 1827, 1833, 1839, 1845, 1851
LweI GCATC 3 cut(s) 1175, 1192, 1981
MabI ACCWGGT 1 cut(s) 337
MaeI CTAG 9 cut(s) 663, 807, 978, 1103, 1281, 1320, 1356, 1398, 2022
MaeII ACGT 2 cut(s) 1546, 1678
MaeIII GTNAC 4 cut(s) 674, 956, 1550, 1622
MalI GATC 5 cut(s) 205, 919, 943, 1984, 2044
MbiI CCGCTC 1 cut(s) 900
MboI GATC 5 cut(s) 203, 917, 941, 1982, 2042
MfeI CAATTG 1 cut(s) 63
MflI RGATCY 1 cut(s) 1982
MhlI GDGCHC 3 cut(s) 145, 1432, 1964
Mly113I GGCGCC 1 cut(s) 406
MlyI GAGTC 8 cut(s) 719, 749, 755, 788, 1253, 1262, 1411, 1861
MmeI TCCRAC 4 cut(s) 729, 1097, 1281, 1313
MroXI GAANNNNTTC 4 cut(s) 712, 994, 1477, 1654
MseI TTAA 6 cut(s) 318, 555, 840, 1049, 1944, 2098
MslI CAYNNNNRTG 2 cut(s) 420, 1137
MspCI CTTAAG 1 cut(s) 1943
MspR9I CCNGG 4 cut(s) 242, 339, 1761, 1951
MunI CAATTG 1 cut(s) 63
MvaI CCWGG 4 cut(s) 242, 339, 1761, 1951
MvnI CGCG 2 cut(s) 1411, 1503
NarI GGCGCC 1 cut(s) 406
NcoI CCATGG 1 cut(s) 351
NdeI CATATG 1 cut(s) 2080
NdeII GATC 5 cut(s) 203, 917, 941, 1982, 2042
NlaIII CATG 8 cut(s) 332, 355, 434, 1025, 1058, 1142, 1330, 1457
NlaIV GGNNCC 9 cut(s) 74, 75, 366, 382, 407, 630, 1787, 1903, 1961
NmuCI GTSAC 1 cut(s) 956
NspI RCATGY 3 cut(s) 434, 1058, 1330
PaeI GCATGC 2 cut(s) 1058, 1330
PagI TCATGA 1 cut(s) 1453
PasI CCCWGGG 1 cut(s) 241
PciI ACATGT 1 cut(s) 430
PciSI GCTCTTC 1 cut(s) 890
PcsI WCGNNNNNNNCGW 1 cut(s) 1552
PdmI GAANNNNTTC 4 cut(s) 712, 994, 1477, 1654
PfeI GAWTC 5 cut(s) 752, 761, 767, 773, 779
PflFI GACNNNGTC 1 cut(s) 339
PleI GAGTC 8 cut(s) 719, 748, 754, 788, 1253, 1262, 1410, 1860
PluTI GGCGCC 1 cut(s) 409
PpsI GAGTC 8 cut(s) 719, 748, 754, 788, 1253, 1262, 1410, 1860
PpuMI RGGWCCY 1 cut(s) 73
PscI ACATGT 1 cut(s) 430
PsiI TTATAA 1 cut(s) 395
Psp124BI GAGCTC 1 cut(s) 1432
Psp5II RGGWCCY 1 cut(s) 73
Psp6I CCWGG 4 cut(s) 240, 337, 1759, 1949
PspGI CCWGG 4 cut(s) 240, 337, 1759, 1949
PspN4I GGNNCC 9 cut(s) 74, 75, 366, 382, 407, 630, 1787, 1903, 1961
PspPI GGNCC 6 cut(s) 73, 238, 365, 1786, 1901, 1968
PspPPI RGGWCCY 1 cut(s) 73
PstNI CAGNNNCTG 2 cut(s) 743, 764
PsuI RGATCY 1 cut(s) 1982
PsyI GACNNNGTC 1 cut(s) 339
RsaI GTAC 4 cut(s) 151, 1378, 1558, 1637
RsaNI GTAC 4 cut(s) 150, 1377, 1557, 1636
RseI CAYNNNNRTG 2 cut(s) 420, 1137
SacI GAGCTC 1 cut(s) 1432
SapI GCTCTTC 1 cut(s) 890
SaqAI TTAA 6 cut(s) 318, 555, 840, 1049, 1944, 2098
Sau3AI GATC 5 cut(s) 203, 917, 941, 1982, 2042
Sau96I GGNCC 6 cut(s) 73, 238, 365, 1786, 1901, 1968
ScaI AGTACT 1 cut(s) 1378
SchI GAGTC 8 cut(s) 719, 749, 755, 788, 1253, 1262, 1411, 1861
ScrFI CCNGG 4 cut(s) 242, 339, 1761, 1951
SduI GDGCHC 3 cut(s) 145, 1432, 1964
SexAI ACCWGGT 1 cut(s) 337
SfaNI GCATC 3 cut(s) 1175, 1192, 1981
SfcI CTRYAG 2 cut(s) 177, 1645
SfoI GGCGCC 1 cut(s) 407
SinI GGWCC 4 cut(s) 73, 365, 1786, 1901
SmiMI CAYNNNNRTG 2 cut(s) 420, 1137
SmlI CTYRAG 4 cut(s) 7, 796, 1639, 1943
SmoI CTYRAG 4 cut(s) 7, 796, 1639, 1943
SphI GCATGC 2 cut(s) 1058, 1330
SspDI GGCGCC 1 cut(s) 405
SspMI CTAG 9 cut(s) 663, 807, 978, 1103, 1281, 1320, 1356, 1398, 2022
SstI GAGCTC 1 cut(s) 1432
StyD4I CCNGG 4 cut(s) 240, 337, 1759, 1949
StyI CCWWGG 5 cut(s) 351, 1319, 1897, 1964, 2021
TaaI ACNGT 3 cut(s) 520, 1556, 1628
TaiI ACGT 2 cut(s) 1549, 1681
TaqI TCGA 3 cut(s) 217, 1735, 2014
TaqII GACCGA 1 cut(s) 1878
TatI WGTACW 2 cut(s) 149, 1376
TauI GCSGC 9 cut(s) 987, 1797, 1803, 1809, 1815, 1821, 1827, 1833, 1839
TfiI GAWTC 5 cut(s) 752, 761, 767, 773, 779
Tru1I TTAA 6 cut(s) 318, 555, 840, 1049, 1944, 2098
Tru9I TTAA 6 cut(s) 318, 555, 840, 1049, 1944, 2098
TscAI CASTG 2 cut(s) 277, 1531
TseFI GTSAC 1 cut(s) 956
TseI GCWGC 9 cut(s) 1791, 1797, 1803, 1809, 1815, 1821, 1827, 1833, 1839
Tsp45I GTSAC 1 cut(s) 956
TspDTI ATGAA 5 cut(s) 203, 324, 708, 1470, 2067
TspGWI ACGGA 3 cut(s) 952, 1571, 1766
TspRI CASTG 2 cut(s) 277, 1531
Tth111I GACNNNGTC 1 cut(s) 339
Vha464I CTTAAG 1 cut(s) 1943
VpaK11BI GGWCC 4 cut(s) 73, 365, 1786, 1901
XapI RAATTY 6 cut(s) 133, 313, 542, 1350, 1492, 1651
XbaI TCTAGA 2 cut(s) 977, 1280
XceI RCATGY 3 cut(s) 434, 1058, 1330
XmaJI CCTAGG 2 cut(s) 1319, 2021
XmiI GTMKAC 2 cut(s) 176, 1675
XmnI GAANNNNTTC 4 cut(s) 712, 994, 1477, 1654
XspI CTAG 9 cut(s) 663, 807, 978, 1103, 1281, 1320, 1356, 1398, 2022
ZrmI AGTACT 1 cut(s) 1378
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.