Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0002895

Physical Location & Seq

Genomic Coordinates Reverse (-)

20734748 .. 20741073

Gene Structure 6326 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G233900.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2025 bp

ATGAACAGGAAAAAGAACCCTTGTGTCTTCTTAGATGTATCAACTGATGGGGACCCAATGGAAAGAGTTGTTATAGAGCTTTTTGCTGATGTTGTTCCTAAGACAGCAGAGAATTTTAGGGCCCTCTGTACAGGTGATAAGGGCATTGGAAAGTCTACAGGCAAACCTCTCCATTACAAAGGATCACAATTTCATCGAATAATAAAAGGATTTATGGCCCAAGGTGGTGATTTTTCAAATGGAAATGGCACTGGTGGAGAAAGTATTTATGGAGGGAAGTTTGCAGATGAAAATTTTAAATTGAAGCATGATGGACCTGGTGTTCTGTCTATGGCAAATGCTGGTCCAAACACAAATGGGTCCCAGTTCTTTATAATCTTCAGGCGCCAGCCTCATCTAGATGGGAAACATGTTGTTTTTGGAAAGGTTGTGAAAGGAATGGATGTAGTTGAGAAAATTGAGCGAGTGGGATCAGCGGATGGAAAACCTTTCCAAACTGTGAAAATTGTCGATTGTGGTGAAGTCTCTGAGAGTAAAGTCCATGGTGCAACAGAGAAAGAGAGAGTTAAAAAGAGGAAATCAGGAAAGGTTTCATCATCTGAGGATGGTTCTGATGGGGAAGCAAGAGGAAGGCGTAAAAAATCCTTGAAGGGAAAAACAAAGAGAAGGAGATACTCTTCATCTGAATCCAGCTCAGACATGTCTGAGTCTAATTCCTCAGATTCAGATTCAGATTCAGATTCAGATTCCTCTCTATCTGACTCAAGTCCGTCTAGTGGCGGAAGGCGTAGGAGGAGGTCTGTTAAAAAAGGTAAGCACCAGCGTTCAAGGAAAAGAAGTGATGGGAAAAAAGAGCGGAAGAGAGGCCGGCATGCCAAACGATCAAGGCGCAAGACAAAACGGAGATTGGAAAGTTCAAGTGATACAGAAAGTGAGAGTACTAGAAGCAGCACAAGCAGTTCTGATGATGATAAAGATGGTCCTCATGTTGCTTCTCGTAAAACCAGTAACCTAAAGCGTGCAGAAAAAAATCTTTCAACAAATCTTGATGTGGGAAAGGAACCCCCTCCTCTAGTTAAAAAAACTGTTGTTGAACAGAGGAACAATCATGATAGGGAGAAAAGTGAGGACAACTCATCCCAAGAAGAAGGTGAATTGTCTCCGAAGAATGATGCCCGTATAAATAACGGGCATAATGCAGAAGCCAAAACAGCTAATCGGAATTCCTACTCAGATGACTCCAGCAGAAGTCCGACTCGCAAAAGGAGGTCAAGAAGCAGTCCAAGCACAAGTCCTAAAAGAATTTCAAGTGGAAGTTCGCCAAGGAATTCTGGTGAGCAAAACAGAGGAAGGCCTTCTAGGAGTCCATTGGGCAGCCCTGTCTACAAAGGCCCTGAACCTTCTACCCATGACCGGGGTTTGTCAAGAAGCACTACTCCAAATGGCACTCCAAAGCGTGTTAGAAAAGGGCGTGGCTTCACTGAGCGCTATGCCTTTGCACGTCGCTACCGCACTCCATCCCCAGAGCAGCCACTTCATAACTCCTATCGTTATGGTGGAAGAGACGTGTATAGAAATAACCGTGATAGGTACTCAAACTACAGAAATTATTCTGAGCACTCACCACGTAGACGTTTCCGGAGTCCACCAAGAGGCGGGAGCCCTCCCAGATACAGAAGCAGGAGAAGTCGAAGTAGGAGCAATTCCCGCAGCCCTGGTGGTTATCGTGGCCGTAATAGGGACCGCAGCCGCAGCCGCAGTCGCAGCCGTAGTCCTAGTCTAGCAGATCGACCTCCTGTAAGTGAGAGACTAAAATCCCGCCTTGGACCCCGAATTGGTGATCAGCACTCTCCAGACAGAGGTAGGCCCAAGTCCAGGTCAAGGAGCCGAGGGCCCTCTCATTCTAGATCTCCAGATGCTACACCAAAGCGTCGTAATAGAACTCCTAGGTCTCCCAGCAGGTCAACATCAAGCTCCCCATCTGGACAAAGGGGTTTGGTTTCATATGAAGATATCAGTCCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pro_isomerase

Protein Analysis

675

Amino Acids

75.13

Weight (kDa)

10.99

Isoelectric Point (pI)

79.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002895)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34870
fragaria_vesca	FvH4_2g22860 FvH4_2g22860 FvH4_2g22860 FvH4_2g22860 FvH4_2g22860 FvH4_2g22860 FvH4_6g42250 FvH4_7g21680 FvH4_7g21700
malus_domestica	MD03G1257000.v1.1 MD11G1277600.v1.1
prunus_persica	Prupe.8G233900_v2.0.a1 Prupe.8G233900_v2.0.a1 Prupe.8G233900_v2.0.a1 Prupe.8G233900_v2.0.a1 Prupe.8G233900_v2.0.a1
pyrus_communis	pycom03g20370 pycom11g24550
rosa_chinensis	RchiOBHm_Chr6g0289781
rosa_laevigata	RLG00000012267 RLG00000027155
rosa_multiflora	Rmu_sc0005640.1_g000007
rosa_roxburghii	Rroxscaffold_1G00032710 Rroxscaffold_7G00177550 Rroxscaffold_7G00178070
rosa_rugosa	Rorug06G0206700 Rorug06G0206800 Rorug06G0206900 Rorug06G0207000
rosa_samantha	Rh1BG318900 Rh1CG332900 Rh1DG349500 Rh6AG318400 Rh6BG325700 Rh6CG331600 Rh6DG317000
rosa_wichuraiana	Rw6G027470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	374
Acc36I	ACCTGC	1 cut(s)	1950
AccB1I	GGYRCC	1 cut(s)	384
AccBSI	CCGCTC	1 cut(s)	856
AccI	GTMKAC	3 cut(s)	155, 1383, 1630
AccIII	TCCGGA	1 cut(s)	1638
AclWI	GGATC	2 cut(s)	190, 478
AcoI	YGGCCR	1 cut(s)	1729
AcsI	RAATTY	5 cut(s)	112, 292, 1222, 1302, 1327
AcuI	CTGAAG	1 cut(s)	364
AcyI	GRCGYC	1 cut(s)	385
AfaI	GTAC	3 cut(s)	130, 940, 1592
AfeI	AGCGCT	1 cut(s)	1487
AflIII	ACRYGT	3 cut(s)	409, 699, 1566
AgsI	TTSAA	8 cut(s)	237, 304, 649, 828, 918, 1038, 1094, 1308
AjiI	CACGTC	2 cut(s)	1502, 1567
AjnI	CCWGG	3 cut(s)	316, 1714, 1874
AloI	GAACNNNNNNTCC	2 cut(s)	306, 338
AluBI	AGCT	4 cut(s)	79, 693, 1214, 1974
AluI	AGCT	4 cut(s)	79, 693, 1214, 1974
Alw21I	GWGCWC	1 cut(s)	1620
Alw26I	GTCTC	5 cut(s)	529, 1164, 1557, 1801, 1956
AlwI	GGATC	2 cut(s)	190, 478
Aor13HI	TCCGGA	1 cut(s)	1638
Aor51HI	AGCGCT	1 cut(s)	1487
AoxI	GGCC	8 cut(s)	120, 216, 865, 1352, 1390, 1729, 1865, 1892
ApaI	GGGCCC	2 cut(s)	124, 1896
ApeKI	GCWGC	7 cut(s)	948, 1374, 1528, 1710, 1746, 1752, 1764
ApoI	RAATTY	5 cut(s)	112, 292, 1222, 1302, 1327
Asp700I	GAANNNNTTC	3 cut(s)	589, 1354, 1609
AspA2I	CCTAGG	1 cut(s)	1946
AspLEI	GCGC	3 cut(s)	387, 891, 1488
AsuC2I	CCSGG	1 cut(s)	1415
AsuHPI	GGTGA	7 cut(s)	146, 239, 530, 1163, 1346, 1614, 1850
AvaII	GGWCC	7 cut(s)	52, 314, 344, 360, 980, 1741, 1826
AvrII	CCTAGG	1 cut(s)	1946
BaeGI	GKGCMC	2 cut(s)	124, 1896
BanI	GGYRCC	1 cut(s)	384
BanII	GRGCYC	3 cut(s)	124, 1664, 1896
BbsI	GAAGAC	1 cut(s)	19
Bbv12I	GWGCWC	1 cut(s)	1620
BbvI	GCAGC	7 cut(s)	960, 1386, 1540, 1722, 1758, 1764, 1776
BceAI	ACGGC	2 cut(s)	1716, 1752
BciT130I	CCWGG	3 cut(s)	318, 1716, 1876
BclI	TGATCA	1 cut(s)	1840
BcnI	CCSGG	1 cut(s)	1415
BcoDI	GTCTC	5 cut(s)	529, 1164, 1557, 1801, 1956
BfaI	CTAG	9 cut(s)	398, 774, 942, 1073, 1359, 1776, 1781, 1905, 1947
BfmI	CTRYAG	2 cut(s)	156, 1600
BfoI	RGCGCY	2 cut(s)	388, 1489
BfuAI	ACCTGC	1 cut(s)	1950
BglII	AGATCT	1 cut(s)	1907
BisI	GCNGC	9 cut(s)	949, 1375, 1529, 1711, 1747, 1750, 1753, 1756, 1765
BlnI	CCTAGG	1 cut(s)	1946
BlsI	GCNGC	9 cut(s)	950, 1376, 1530, 1712, 1748, 1751, 1754, 1757, 1766
BmcAI	AGTACT	1 cut(s)	940
Bme1390I	CCNGG	4 cut(s)	318, 1415, 1716, 1876
Bme18I	GGWCC	7 cut(s)	52, 314, 344, 360, 980, 1741, 1826
BmgBI	CACGTC	2 cut(s)	1502, 1567
BmrFI	CCNGG	4 cut(s)	318, 1415, 1716, 1876
BmrI	ACTGGG	1 cut(s)	358
BmsI	GCATC	2 cut(s)	1162, 1906
BmuI	ACTGGG	1 cut(s)	358
BoxI	GACNNNNGTC	1 cut(s)	765
BpiI	GAAGAC	1 cut(s)	19
BplI	GAGNNNNNCTC	2 cut(s)	1118, 1150
BpmI	CTGGAG	3 cut(s)	1225, 1836, 1896
BpuEI	CTTGAG	1 cut(s)	748
BpuMI	CCSGG	1 cut(s)	1415
BsaAI	YACGTR	1 cut(s)	1628
BsaHI	GRCGYC	1 cut(s)	385
BsaI	GGTCTC	1 cut(s)	1956
BsaJI	CCNNGG	8 cut(s)	220, 541, 1322, 1414, 1714, 1822, 1888, 1946
BsaWI	WCCGGW	1 cut(s)	1638
Bse118I	RCCGGY	1 cut(s)	867
Bse1I	ACTGG	3 cut(s)	256, 364, 1005
BseAI	TCCGGA	1 cut(s)	1638
BseBI	CCWGG	3 cut(s)	318, 1716, 1876
BseDI	CCNNGG	8 cut(s)	220, 541, 1322, 1414, 1714, 1822, 1888, 1946
BseGI	GGATG	5 cut(s)	448, 484, 610, 1136, 1517
BseMII	CTCAG	8 cut(s)	519, 591, 696, 708, 732, 1245, 1473, 1605
BseNI	ACTGG	3 cut(s)	256, 364, 1005
BseRI	GAGGAG	2 cut(s)	808, 1059
BseSI	GKGCMC	2 cut(s)	124, 1896
BseXI	GCAGC	7 cut(s)	960, 1386, 1540, 1722, 1758, 1764, 1776
BseYI	CCCAGC	1 cut(s)	1955
BsgI	GTGCAG	1 cut(s)	1041
BshFI	GGCC	8 cut(s)	122, 218, 867, 1354, 1392, 1731, 1867, 1894
BshNI	GGYRCC	1 cut(s)	384
BsiHKAI	GWGCWC	1 cut(s)	1620
BsiSI	CCGG	3 cut(s)	868, 1414, 1639
BslFI	GGGAC	3 cut(s)	65, 346, 1754
BsmAI	GTCTC	5 cut(s)	529, 1164, 1557, 1801, 1956
BsmBI	CGTCTC	1 cut(s)	1557
BsmFI	GGGAC	3 cut(s)	65, 346, 1754
BsnI	GGCC	8 cut(s)	122, 218, 867, 1354, 1392, 1731, 1867, 1894
Bso31I	GGTCTC	1 cut(s)	1956
Bsp120I	GGGCCC	2 cut(s)	120, 1892
Bsp1286I	GDGCHC	4 cut(s)	124, 1620, 1664, 1896
Bsp13I	TCCGGA	1 cut(s)	1638
Bsp1407I	TGTACA	1 cut(s)	128
Bsp143I	GATC	6 cut(s)	182, 470, 881, 1786, 1840, 1907
Bsp19I	CCATGG	1 cut(s)	541
BspANI	GGCC	8 cut(s)	122, 218, 867, 1354, 1392, 1731, 1867, 1894
BspCNI	CTCAG	8 cut(s)	520, 592, 697, 707, 731, 1244, 1474, 1606
BspEI	TCCGGA	1 cut(s)	1638
BspHI	TCATGA	1 cut(s)	1108
BspMI	ACCTGC	1 cut(s)	1950
BspPI	GGATC	2 cut(s)	190, 478
BspT107I	GGYRCC	1 cut(s)	384
BspTNI	GGTCTC	1 cut(s)	1956
BsrBI	CCGCTC	1 cut(s)	856
BsrFI	RCCGGY	1 cut(s)	867
BsrGI	TGTACA	1 cut(s)	128
BsrI	ACTGG	3 cut(s)	256, 364, 1005
BssAI	RCCGGY	1 cut(s)	867
BssECI	CCNNGG	8 cut(s)	220, 541, 1322, 1414, 1714, 1822, 1888, 1946
BssMI	GATC	6 cut(s)	182, 470, 881, 1786, 1840, 1907
BssNI	GRCGYC	1 cut(s)	385
BssT1I	CCWWGG	5 cut(s)	220, 541, 1322, 1822, 1946
Bst2UI	CCWGG	3 cut(s)	318, 1716, 1876
Bst4CI	ACNGT	3 cut(s)	499, 1087, 1583
Bst6I	CTCTTC	3 cut(s)	682, 854, 1555
BstACI	GRCGYC	1 cut(s)	385
BstAUI	TGTACA	1 cut(s)	128
BstBAI	YACGTR	1 cut(s)	1628
BstC8I	GCNNGC	4 cut(s)	389, 869, 873, 1020
BstDSI	CCRYGG	1 cut(s)	541
BstF5I	GGATG	5 cut(s)	448, 484, 610, 1136, 1517
BstH2I	RGCGCY	2 cut(s)	388, 1489
BstHHI	GCGC	3 cut(s)	387, 891, 1488
BstKTI	GATC	6 cut(s)	185, 473, 884, 1789, 1843, 1910
BstMAI	GTCTC	5 cut(s)	529, 1164, 1557, 1801, 1956
BstMBI	GATC	6 cut(s)	182, 470, 881, 1786, 1840, 1907
BstMWI	GCNNNNNNNGC	8 cut(s)	954, 1211, 1284, 1707, 1752, 1755, 1761, 1764
BstNI	CCWGG	3 cut(s)	318, 1716, 1876
BstNSI	RCATGY	3 cut(s)	413, 703, 875
BstPAI	GACNNNNGTC	1 cut(s)	765
BstSCI	CCNGG	4 cut(s)	316, 1413, 1714, 1874
BstSFI	CTRYAG	2 cut(s)	156, 1600
BstSLI	GKGCMC	2 cut(s)	124, 1896
BstV1I	GCAGC	7 cut(s)	960, 1386, 1540, 1722, 1758, 1764, 1776
BstV2I	GAAGAC	1 cut(s)	19
BstX2I	RGATCY	1 cut(s)	1907
BstYI	RGATCY	1 cut(s)	1907
BsuRI	GGCC	8 cut(s)	122, 218, 867, 1354, 1392, 1731, 1867, 1894
BtgI	CCRYGG	1 cut(s)	541
BtrI	CACGTC	2 cut(s)	1502, 1567
BtsCI	GGATG	5 cut(s)	448, 484, 610, 1136, 1517
BtsIMutI	CAGTG	2 cut(s)	249, 1479
BveI	ACCTGC	1 cut(s)	1950
Cac8I	GCNNGC	4 cut(s)	389, 869, 873, 1020
CciI	TCATGA	1 cut(s)	1108
CfoI	GCGC	3 cut(s)	387, 891, 1488
Cfr10I	RCCGGY	1 cut(s)	867
CseI	GACGC	1 cut(s)	1919
CsiI	ACCWGGT	1 cut(s)	316
Csp6I	GTAC	3 cut(s)	129, 939, 1591
CviAII	CATG	8 cut(s)	308, 410, 542, 700, 872, 986, 1109, 1409
CviQI	GTAC	3 cut(s)	129, 939, 1591
DinI	GGCGCC	1 cut(s)	386
DpnI	GATC	6 cut(s)	184, 472, 883, 1788, 1842, 1909
DpnII	GATC	6 cut(s)	182, 470, 881, 1786, 1840, 1907
DraI	TTTAAA	1 cut(s)	298
EaeI	YGGCCR	1 cut(s)	1729
Eam1104I	CTCTTC	3 cut(s)	682, 854, 1555
EarI	CTCTTC	3 cut(s)	682, 854, 1555
EciI	GGCGGA	1 cut(s)	795
Eco130I	CCWWGG	5 cut(s)	220, 541, 1322, 1822, 1946
Eco147I	AGGCCT	1 cut(s)	1354
Eco24I	GRGCYC	3 cut(s)	124, 1664, 1896
Eco31I	GGTCTC	1 cut(s)	1956
Eco32I	GATATC	1 cut(s)	2014
Eco47I	GGWCC	7 cut(s)	52, 314, 344, 360, 980, 1741, 1826
Eco47III	AGCGCT	1 cut(s)	1487
Eco57I	CTGAAG	1 cut(s)	364
EcoO109I	RGGNCCY	7 cut(s)	52, 120, 121, 360, 1391, 1892, 1893
EcoRI	GAATTC	2 cut(s)	1222, 1327
EcoRII	CCWGG	3 cut(s)	316, 1714, 1874
EcoRV	GATATC	1 cut(s)	2014
EcoT14I	CCWWGG	5 cut(s)	220, 541, 1322, 1822, 1946
EcoT38I	GRGCYC	3 cut(s)	124, 1664, 1896
EgeI	GGCGCC	1 cut(s)	386
EheI	GGCGCC	1 cut(s)	386
ErhI	CCWWGG	5 cut(s)	220, 541, 1322, 1822, 1946
Esp3I	CGTCTC	1 cut(s)	1557
FaeI	CATG	8 cut(s)	311, 413, 545, 703, 875, 989, 1112, 1412
FaqI	GGGAC	3 cut(s)	65, 346, 1754
FatI	CATG	8 cut(s)	307, 409, 541, 699, 871, 985, 1108, 1408
FauI	CCCGC	3 cut(s)	1649, 1715, 1826
FauNDI	CATATG	1 cut(s)	2005
FbaI	TGATCA	1 cut(s)	1840
FblI	GTMKAC	3 cut(s)	155, 1383, 1630
Fnu4HI	GCNGC	9 cut(s)	949, 1375, 1529, 1711, 1747, 1750, 1753, 1756, 1765
FokI	GGATG	5 cut(s)	455, 491, 617, 1123, 1504
FriOI	GRGCYC	3 cut(s)	124, 1664, 1896
Fsp4HI	GCNGC	9 cut(s)	949, 1375, 1529, 1711, 1747, 1750, 1753, 1756, 1765
FspBI	CTAG	9 cut(s)	398, 774, 942, 1073, 1359, 1776, 1781, 1905, 1947
GlaI	GCGC	3 cut(s)	386, 890, 1487
GluI	GCNGC	9 cut(s)	949, 1375, 1529, 1711, 1747, 1750, 1753, 1756, 1765
GsaI	CCCAGC	1 cut(s)	1959
GsuI	CTGGAG	3 cut(s)	1225, 1836, 1896
HaeII	RGCGCY	2 cut(s)	388, 1489
HaeIII	GGCC	8 cut(s)	122, 218, 867, 1354, 1392, 1731, 1867, 1894
HapII	CCGG	3 cut(s)	868, 1414, 1639
HgaI	GACGC	1 cut(s)	1919
HhaI	GCGC	3 cut(s)	387, 891, 1488
Hin1I	GRCGYC	1 cut(s)	385
Hin1II	CATG	8 cut(s)	311, 413, 545, 703, 875, 989, 1112, 1412
Hin6I	GCGC	3 cut(s)	385, 889, 1486
HinP1I	GCGC	3 cut(s)	385, 889, 1486
HincII	GTYRAC	1 cut(s)	1965
HindII	GTYRAC	1 cut(s)	1965
HpaII	CCGG	3 cut(s)	868, 1414, 1639
HphI	GGTGA	7 cut(s)	146, 239, 530, 1163, 1346, 1614, 1850
Hpy166II	GTNNAC	5 cut(s)	156, 1384, 1631, 1646, 1965
Hpy8I	GTNNAC	5 cut(s)	156, 1384, 1631, 1646, 1965
Hpy99I	CGWCG	2 cut(s)	1506, 1935
HpyAV	CCTTC	8 cut(s)	624, 643, 660, 777, 1142, 1344, 1365, 1410
HpyCH4III	ACNGT	3 cut(s)	499, 1087, 1583
HpyCH4IV	ACGT	4 cut(s)	1501, 1566, 1627, 1633
HpyCH4V	TGCA	5 cut(s)	284, 548, 1022, 1199, 1499
HpyF10VI	GCNNNNNNNGC	8 cut(s)	954, 1211, 1284, 1707, 1752, 1755, 1761, 1764
HpySE526I	ACGT	4 cut(s)	1501, 1566, 1627, 1633
Hsp92I	GRCGYC	1 cut(s)	385
Hsp92II	CATG	8 cut(s)	311, 413, 545, 703, 875, 989, 1112, 1412
HspAI	GCGC	3 cut(s)	385, 889, 1486
KasI	GGCGCC	1 cut(s)	384
KflI	GGGWCCC	2 cut(s)	52, 360
Kpn2I	TCCGGA	1 cut(s)	1638
KroI	GCCGGC	1 cut(s)	867
KroNI	GCCGGC	1 cut(s)	869
Ksp22I	TGATCA	1 cut(s)	1840
Kzo9I	GATC	6 cut(s)	182, 470, 881, 1786, 1840, 1907
LmnI	GCTCC	4 cut(s)	1659, 1698, 1884, 1979
Lsp1109I	GCAGC	7 cut(s)	960, 1386, 1540, 1722, 1758, 1764, 1776
LweI	GCATC	2 cut(s)	1162, 1906
MabI	ACCWGGT	1 cut(s)	316
MaeI	CTAG	9 cut(s)	398, 774, 942, 1073, 1359, 1776, 1781, 1905, 1947
MaeII	ACGT	4 cut(s)	1501, 1566, 1627, 1633
MaeIII	GTNAC	1 cut(s)	1007
MalI	GATC	6 cut(s)	184, 472, 883, 1788, 1842, 1909
MbiI	CCGCTC	1 cut(s)	856
MboI	GATC	6 cut(s)	182, 470, 881, 1786, 1840, 1907
MboII	GAAGA	8 cut(s)	19, 370, 669, 871, 1157, 1177, 1572, 2021
MflI	RGATCY	1 cut(s)	1907
MhlI	GDGCHC	4 cut(s)	124, 1620, 1664, 1896
Mly113I	GGCGCC	1 cut(s)	385
MlyI	GAGTC	6 cut(s)	716, 755, 1232, 1249, 1372, 1651
MmeI	TCCRAC	1 cut(s)	1277
MroI	TCCGGA	1 cut(s)	1638
MroNI	GCCGGC	1 cut(s)	867
MroXI	GAANNNNTTC	3 cut(s)	589, 1354, 1609
MseI	TTAA	5 cut(s)	297, 567, 804, 1077, 2023
MslI	CAYNNNNRTG	1 cut(s)	399
MspA1I	CMGCKG	1 cut(s)	476
MspI	CCGG	3 cut(s)	868, 1414, 1639
MspR9I	CCNGG	4 cut(s)	318, 1415, 1716, 1876
MvaI	CCWGG	3 cut(s)	318, 1716, 1876
MwoI	GCNNNNNNNGC	8 cut(s)	954, 1211, 1284, 1707, 1752, 1755, 1761, 1764
NaeI	GCCGGC	1 cut(s)	869
NarI	GGCGCC	1 cut(s)	385
NciI	CCSGG	1 cut(s)	1415
NcoI	CCATGG	1 cut(s)	541
NdeI	CATATG	1 cut(s)	2005
NdeII	GATC	6 cut(s)	182, 470, 881, 1786, 1840, 1907
NgoMIV	GCCGGC	1 cut(s)	867
NlaIII	CATG	8 cut(s)	311, 413, 545, 703, 875, 989, 1112, 1412
NmeAIII	GCCGAG	1 cut(s)	1913
NspI	RCATGY	3 cut(s)	413, 703, 875
PaeI	GCATGC	1 cut(s)	875
PagI	TCATGA	1 cut(s)	1108
PceI	AGGCCT	1 cut(s)	1354
PciI	ACATGT	2 cut(s)	409, 699
PdiI	GCCGGC	1 cut(s)	869
PdmI	GAANNNNTTC	3 cut(s)	589, 1354, 1609
PfeI	GAWTC	6 cut(s)	686, 722, 728, 734, 740, 746
PkrI	GCNGC	9 cut(s)	950, 1376, 1530, 1712, 1748, 1751, 1754, 1757, 1766
PleI	GAGTC	6 cut(s)	715, 755, 1232, 1249, 1371, 1650
PluTI	GGCGCC	1 cut(s)	388
PpsI	GAGTC	6 cut(s)	715, 755, 1232, 1249, 1371, 1650
Ppu21I	YACGTR	1 cut(s)	1628
PpuMI	RGGWCCY	2 cut(s)	52, 360
PscI	ACATGT	2 cut(s)	409, 699
PshAI	GACNNNNGTC	1 cut(s)	765
PsiI	TTATAA	1 cut(s)	374
Psp5II	RGGWCCY	2 cut(s)	52, 360
Psp6I	CCWGG	3 cut(s)	316, 1714, 1874
PspFI	CCCAGC	1 cut(s)	1955
PspGI	CCWGG	3 cut(s)	316, 1714, 1874
PspOMI	GGGCCC	2 cut(s)	120, 1892
PspPPI	RGGWCCY	2 cut(s)	52, 360
PsuI	RGATCY	1 cut(s)	1907
RsaI	GTAC	3 cut(s)	130, 940, 1592
RsaNI	GTAC	3 cut(s)	129, 939, 1591
RseI	CAYNNNNRTG	1 cut(s)	399
SaqAI	TTAA	5 cut(s)	297, 567, 804, 1077, 2023
SatI	GCNGC	9 cut(s)	949, 1375, 1529, 1711, 1747, 1750, 1753, 1756, 1765
Sau3AI	GATC	6 cut(s)	182, 470, 881, 1786, 1840, 1907
ScaI	AGTACT	1 cut(s)	940
SchI	GAGTC	6 cut(s)	716, 755, 1232, 1249, 1372, 1651
ScrFI	CCNGG	4 cut(s)	318, 1415, 1716, 1876
SduI	GDGCHC	4 cut(s)	124, 1620, 1664, 1896
SexAI	ACCWGGT	1 cut(s)	316
SfaNI	GCATC	2 cut(s)	1162, 1906
SfcI	CTRYAG	2 cut(s)	156, 1600
SfoI	GGCGCC	1 cut(s)	386
SinI	GGWCC	7 cut(s)	52, 314, 344, 360, 980, 1741, 1826
SmiMI	CAYNNNNRTG	1 cut(s)	399
SmlI	CTYRAG	1 cut(s)	763
SmoI	CTYRAG	1 cut(s)	763
SphI	GCATGC	1 cut(s)	875
SseBI	AGGCCT	1 cut(s)	1354
SspDI	GGCGCC	1 cut(s)	384
SspMI	CTAG	9 cut(s)	398, 774, 942, 1073, 1359, 1776, 1781, 1905, 1947
StuI	AGGCCT	1 cut(s)	1354
StyD4I	CCNGG	4 cut(s)	316, 1413, 1714, 1874
StyI	CCWWGG	5 cut(s)	220, 541, 1322, 1822, 1946
TaaI	ACNGT	3 cut(s)	499, 1087, 1583
TaiI	ACGT	4 cut(s)	1504, 1569, 1630, 1636
TaqI	TCGA	4 cut(s)	196, 510, 1690, 1789
TatI	WGTACW	2 cut(s)	128, 938
TauI	GCSGC	2 cut(s)	1752, 1758
TfiI	GAWTC	6 cut(s)	686, 722, 728, 734, 740, 746
Tru1I	TTAA	5 cut(s)	297, 567, 804, 1077, 2023
Tru9I	TTAA	5 cut(s)	297, 567, 804, 1077, 2023
TscAI	CASTG	2 cut(s)	256, 1486
TseI	GCWGC	7 cut(s)	948, 1374, 1528, 1710, 1746, 1752, 1764
TspDTI	ATGAA	8 cut(s)	17, 182, 303, 582, 669, 1526, 1992, 2022
TspGWI	ACGGA	2 cut(s)	759, 916
TspRI	CASTG	2 cut(s)	256, 1486
VpaK11BI	GGWCC	7 cut(s)	52, 314, 344, 360, 980, 1741, 1826
XapI	RAATTY	5 cut(s)	112, 292, 1222, 1302, 1327
XbaI	TCTAGA	2 cut(s)	397, 1904
XceI	RCATGY	3 cut(s)	413, 703, 875
XmaJI	CCTAGG	1 cut(s)	1946
XmiI	GTMKAC	3 cut(s)	155, 1383, 1630
XmnI	GAANNNNTTC	3 cut(s)	589, 1354, 1609
XspI	CTAG	9 cut(s)	398, 774, 942, 1073, 1359, 1776, 1781, 1905, 1947
ZrmI	AGTACT	1 cut(s)	940

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.