Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0002895

Physical Location & Seq

Genomic Coordinates Forward (+)

33009943 .. 33012459

Gene Structure 2517 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0206800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1746 bp

ATGTTAGCGAGCTCCGGCGAAGCCATGATGGTGACAGAACCAGCAGTACTACTTCATGAAGGCAGCAGTACTACTGAAACCGCGGCCGCACTTTTGTCGAATTCAGGTGAAGAAGATCATCACAAGCATACTTCTGGCGACGTTGATCACGAGGGTGGTCATGATGACGACTACCGGAGCTATGGAGGAGGAGGAGGAGGAAACCGGTGGCCTCGCCAAGAAACTTTGGCACTCCTGAAGATAAGGTCTCAAATGGATGCTGCTTTTCGCGACTCCGGTCTCAAAGCTCCATTGTGGGAAGATATTTCAAGGAAACTAGGGGAGCTTGGTTATTACAGAAGTGCCAAGAAATGCAAGGAGAAATTCGAGAACGTGTACAAGTACCACAGAAGAACCAAAGAAGGCCGATCTGGAAAGCCAGAAGGAAAAACTTATCGGTTTTTTGACGAACTTGAAGCTTTTGATCGTCATCAGAATAGTCACCATCCATCAATAATACCACCAAAACCGCCAGTGGTGCTGTGGACCAACAACAACCACCACCATCCAAACCAAACTGTCCCTCCTGTCGTCACTGTTCCGCAAAACGGCGTCACTCCAGCCACAGATCCAATCATTCATTCATCAACAAACAATTTTTCACGGCCACAGCAAATTCAAGCATCACAAGATAATACTAATGGATTCCGACTATTAAATCCGACCAATCTGTTCTCTAGCTCTACATCTTCTACTACTGCTTCAGACGAAGAGTTTCCGCAACGAAACAAGAGGAAAAGGAAATGGAAATACTTCTTCAGAAGACTGACAAAGCAAGTTCTCGAGAAGCAGGAGAAGCTGCAAGAAACGTTCTTGGAAGCCATTACCAAATGCGATCAAGAACGAATGGTGAAAGAAGAAGCTTTGAGAATGCAAGAGATGGCAAGAATCGATCGGGAACACGAGATTTTAGTCCAAGAGAGATCGACAGCGGCAGCTAAAGACACCGCCCTCATACAATTCTTGCAGAAGGTTTCGTTGCAATATAACTCGAATGATAATCGATCACTCGAAATCACTGATGCCGCAATACTAGTAGTACCACCAACAAATGTGCCTCGGCCATTGCCAGCACTACCGGTGTCTTGGGCAACGGACCAACGTGGTCTCACTACTAGTTCTGATTTAGCACCGAGAAATTTGGAGGCTAAGAAAGTGTATAGTAGCGGCGAAAACAATTCTGTTCTAGCTGCTGTCGGGTCCTCAAGATGGCCGAAAACGGAAGTTCAAGCATTGATAAATCTTAGGACAAGTCTTGATGTCAAGTATCAGGAAGCTGGGCCAAAAGGGTCTCTGTGGGAGGAGATATCGGCCGGGATGAGGAGGCTCGGCTACAATCGGAGCTCGAAGAGGTGCAAGGAGAAATGGGAGAACATCAACAAATACTTCAAGAAGGTCAAGGAGAGCAGCAAAACGAGACCCGAAGATTCAAAAACATGTCCTTACTTTCACCAGCTTGAAGCCTTGTACAAAAAGAAGAACAACAATATTGAATATCACAAGTCGTGCATTGACGATCGTAGTGTTGAGAAGCTCCAAATAATGCAGCCACTGAGGGAAAATGTGGATACAAATCCAGAGGAAGATGAACATGATCATGGTGAAGATGGAGAAAGTACGGAAGAAGATCAAGAACATGATCATGATCATGGCCAGGTGTATAGGGATAGTAACAAATTACAAACCGTCATCAATGGAGATGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pro_isomerase

Protein Analysis

581

Amino Acids

66.15

Weight (kDa)

6.64

Isoelectric Point (pI)

53.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-bind_4	PF13837	68 - 153	2.2e-22	Myb/SANT-like DNA-binding domain
Myb_DNA-bind_4	PF13837	415 - 502	1e-24	Myb/SANT-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002895)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34870
fragaria_vesca	FvH4_2g22860 FvH4_2g22860 FvH4_2g22860 FvH4_2g22860 FvH4_2g22860 FvH4_2g22860 FvH4_6g42250 FvH4_7g21680 FvH4_7g21700
malus_domestica	MD03G1257000.v1.1 MD11G1277600.v1.1
prunus_persica	Prupe.8G233900_v2.0.a1 Prupe.8G233900_v2.0.a1 Prupe.8G233900_v2.0.a1 Prupe.8G233900_v2.0.a1 Prupe.8G233900_v2.0.a1
pyrus_communis	pycom03g20370 pycom11g24550
rosa_chinensis	RchiOBHm_Chr6g0289781
rosa_laevigata	RLG00000012267 RLG00000027155
rosa_multiflora	Rmu_sc0005640.1_g000007
rosa_roxburghii	Rroxscaffold_1G00032710 Rroxscaffold_7G00177550 Rroxscaffold_7G00178070
rosa_rugosa	Rorug06G0206700 Rorug06G0206800 Rorug06G0206900 Rorug06G0207000
rosa_samantha	Rh1BG318900 Rh1CG332900 Rh1DG349500 Rh6AG318400 Rh6BG325700 Rh6CG331600 Rh6DG317000
rosa_wichuraiana	Rw6G027470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	2 cut(s)	83, 270
AclI	AACGTT	1 cut(s)	848
AclWI	GGATC	1 cut(s)	602
AcoI	YGGCCR	6 cut(s)	84, 644, 1100, 1250, 1350, 1690
AcsI	RAATTY	4 cut(s)	100, 362, 654, 1177
AcuI	CTGAAG	3 cut(s)	257, 726, 781
AcyI	GRCGYC	1 cut(s)	591
AfaI	GTAC	7 cut(s)	48, 70, 377, 383, 1080, 1508, 1657
AfiI	CCNNNNNNNGG	3 cut(s)	587, 1248, 1359
AflIII	ACRYGT	2 cut(s)	372, 1475
AgeI	ACCGGT	2 cut(s)	204, 1117
AgsI	TTSAA	8 cut(s)	309, 455, 659, 1268, 1429, 1470, 1499, 1532
AhlI	ACTAGT	2 cut(s)	1072, 1154
AjnI	CCWGG	1 cut(s)	1692
AjuI	GAANNNNNNNTTGG	2 cut(s)	604, 636
AleI	CACNNNNGTG	1 cut(s)	153
Alw21I	GWGCWC	2 cut(s)	14, 1385
Alw26I	GTCTC	5 cut(s)	252, 284, 1151, 1335, 1450
AlwI	GGATC	1 cut(s)	602
AlwNI	CAGNNNCTG	1 cut(s)	1591
Ama87I	CYCGRG	1 cut(s)	821
AoxI	GGCC	9 cut(s)	84, 209, 403, 644, 1100, 1250, 1319, 1350, 1690
ApeKI	GCWGC	7 cut(s)	63, 260, 838, 974, 1229, 1446, 1585
ApoI	RAATTY	4 cut(s)	100, 362, 654, 1177
AsiGI	ACCGGT	2 cut(s)	204, 1117
Asp700I	GAANNNNTTC	2 cut(s)	753, 791
AspS9I	GGNCC	4 cut(s)	525, 1135, 1239, 1319
AsuC2I	CCSGG	1 cut(s)	1354
AsuHPI	GGTGA	6 cut(s)	43, 119, 473, 901, 1481, 1652
AvaI	CYCGRG	1 cut(s)	821
AvaII	GGWCC	3 cut(s)	525, 1135, 1239
BalI	TGGCCA	1 cut(s)	1692
BanII	GRGCYC	2 cut(s)	14, 1385
BauI	CACGAG	2 cut(s)	149, 941
BbsI	GAAGAC	1 cut(s)	808
Bbv12I	GWGCWC	2 cut(s)	14, 1385
BbvI	GCAGC	7 cut(s)	75, 247, 825, 986, 1216, 1458, 1597
BccI	CCATC	8 cut(s)	22, 492, 496, 552, 913, 1242, 1640, 1733
BceAI	ACGGC	2 cut(s)	604, 659
BcgI	CGANNNNNNTGC	2 cut(s)	78, 112
BciT130I	CCWGG	1 cut(s)	1694
BciVI	GTATCC	1 cut(s)	1600
BclI	TGATCA	4 cut(s)	145, 1633, 1678, 1684
BcnI	CCSGG	1 cut(s)	1354
BcoDI	GTCTC	5 cut(s)	252, 284, 1151, 1335, 1450
BcuI	ACTAGT	2 cut(s)	1072, 1154
BfaI	CTAG	5 cut(s)	317, 717, 1073, 1155, 1226
BfuI	GTATCC	1 cut(s)	1600
BmcAI	AGTACT	2 cut(s)	48, 70
Bme1390I	CCNGG	2 cut(s)	1354, 1694
Bme18I	GGWCC	3 cut(s)	525, 1135, 1239
BmeT110I	CYCGRG	1 cut(s)	821
BmgT120I	GGNCC	4 cut(s)	525, 1135, 1239, 1319
BmiI	GGNNCC	1 cut(s)	1240
BmrFI	CCNGG	2 cut(s)	1354, 1694
BmsI	GCATC	3 cut(s)	247, 671, 1051
BoxI	GACNNNNGTC	1 cut(s)	276
BpiI	GAAGAC	1 cut(s)	808
BpmI	CTGGAG	1 cut(s)	582
BpuEI	CTTGAG	1 cut(s)	1228
BpuMI	CCSGG	1 cut(s)	1354
Bsa29I	ATCGAT	2 cut(s)	930, 1042
BsaBI	GATNNNNATC	3 cut(s)	468, 1611, 1683
BsaHI	GRCGYC	1 cut(s)	591
BsaI	GGTCTC	5 cut(s)	252, 284, 1151, 1335, 1450
BsaJI	CCNNGG	2 cut(s)	81, 1097
BsaWI	WCCGGW	4 cut(s)	174, 204, 275, 1117
BsaXI	ACNNNNNCTCC	2 cut(s)	547, 577
Bsc4I	CCNNNNNNNGG	3 cut(s)	587, 1248, 1359
Bse118I	RCCGGY	2 cut(s)	204, 1117
Bse1I	ACTGG	1 cut(s)	512
Bse3DI	GCAATG	1 cut(s)	1103
Bse8I	GATNNNNATC	3 cut(s)	468, 1611, 1683
BseBI	CCWGG	1 cut(s)	1694
BseCI	ATCGAT	2 cut(s)	930, 1042
BseDI	CCNNGG	2 cut(s)	81, 1097
BseGI	GGATG	4 cut(s)	262, 484, 544, 1362
BseJI	GATNNNNATC	3 cut(s)	468, 1611, 1683
BseLI	CCNNNNNNNGG	3 cut(s)	587, 1248, 1359
BseMI	GCAATG	1 cut(s)	1103
BseMII	CTCAG	1 cut(s)	1583
BseNI	ACTGG	1 cut(s)	512
BseRI	GAGGAG	6 cut(s)	201, 204, 207, 210, 1355, 1375
BseX3I	CGGCCG	2 cut(s)	84, 1350
BseXI	GCAGC	7 cut(s)	75, 247, 825, 986, 1216, 1458, 1597
BseYI	CCCAGC	1 cut(s)	1316
Bsh1236I	CGCG	2 cut(s)	83, 270
Bsh1285I	CGRYCG	4 cut(s)	87, 934, 1353, 1558
BshFI	GGCC	9 cut(s)	86, 211, 405, 646, 1102, 1252, 1321, 1352, 1692
BshTI	ACCGGT	2 cut(s)	204, 1117
BshVI	ATCGAT	2 cut(s)	930, 1042
BsiEI	CGRYCG	4 cut(s)	87, 934, 1353, 1558
BsiHKAI	GWGCWC	2 cut(s)	14, 1385
BsiHKCI	CYCGRG	1 cut(s)	821
BsiSI	CCGG	6 cut(s)	15, 175, 205, 276, 1118, 1353
BslFI	GGGAC	1 cut(s)	545
BslI	CCNNNNNNNGG	3 cut(s)	587, 1248, 1359
BsmAI	GTCTC	5 cut(s)	252, 284, 1151, 1335, 1450
BsmFI	GGGAC	1 cut(s)	545
BsmI	GAATGC	1 cut(s)	915
BsnI	GGCC	9 cut(s)	86, 211, 405, 646, 1102, 1252, 1321, 1352, 1692
Bso31I	GGTCTC	5 cut(s)	252, 284, 1151, 1335, 1450
BsoBI	CYCGRG	1 cut(s)	821
Bsp1286I	GDGCHC	2 cut(s)	14, 1385
Bsp1407I	TGTACA	2 cut(s)	375, 1506
Bsp68I	TCGCGA	1 cut(s)	270
BspANI	GGCC	9 cut(s)	86, 211, 405, 646, 1102, 1252, 1321, 1352, 1692
BspCNI	CTCAG	1 cut(s)	1584
BspDI	ATCGAT	2 cut(s)	930, 1042
BspFNI	CGCG	2 cut(s)	83, 270
BspHI	TCATGA	3 cut(s)	55, 160, 1681
BspLI	GGNNCC	1 cut(s)	1240
BspPI	GGATC	1 cut(s)	602
BspTNI	GGTCTC	5 cut(s)	252, 284, 1151, 1335, 1450
BsrDI	GCAATG	1 cut(s)	1103
BsrFI	RCCGGY	2 cut(s)	204, 1117
BsrGI	TGTACA	2 cut(s)	375, 1506
BsrI	ACTGG	1 cut(s)	512
BssAI	RCCGGY	2 cut(s)	204, 1117
BssECI	CCNNGG	2 cut(s)	81, 1097
BssNI	GRCGYC	1 cut(s)	591
BssSI	CACGAG	2 cut(s)	149, 941
Bst2BI	CACGAG	2 cut(s)	149, 941
Bst2UI	CCWGG	1 cut(s)	1694
Bst4CI	ACNGT	3 cut(s)	559, 577, 1726
Bst6I	CTCTTC	2 cut(s)	744, 1382
BstACI	GRCGYC	1 cut(s)	591
BstAUI	TGTACA	2 cut(s)	375, 1506
BstC8I	GCNNGC	2 cut(s)	10, 1110
BstDEI	CTNAG	3 cut(s)	1188, 1283, 1592
BstDSI	CCRYGG	1 cut(s)	81
BstF5I	GGATG	4 cut(s)	262, 484, 544, 1362
BstFNI	CGCG	2 cut(s)	83, 270
BstMAI	GTCTC	5 cut(s)	252, 284, 1151, 1335, 1450
BstMCI	CGRYCG	4 cut(s)	87, 934, 1353, 1558
BstMWI	GCNNNNNNNGC	2 cut(s)	517, 835
BstNI	CCWGG	1 cut(s)	1694
BstNSI	RCATGY	1 cut(s)	1479
BstPAI	GACNNNNGTC	1 cut(s)	276
BstSCI	CCNGG	2 cut(s)	1352, 1692
BstUI	CGCG	2 cut(s)	83, 270
BstV1I	GCAGC	7 cut(s)	75, 247, 825, 986, 1216, 1458, 1597
BstV2I	GAAGAC	1 cut(s)	808
BstX2I	RGATCY	1 cut(s)	607
BstYI	RGATCY	1 cut(s)	607
BstZI	CGGCCG	2 cut(s)	84, 1350
Bsu15I	ATCGAT	2 cut(s)	930, 1042
BsuI	GTATCC	1 cut(s)	1600
BsuRI	GGCC	9 cut(s)	86, 211, 405, 646, 1102, 1252, 1321, 1352, 1692
BsuTUI	ATCGAT	2 cut(s)	930, 1042
BtgI	CCRYGG	1 cut(s)	81
BtsCI	GGATG	4 cut(s)	262, 484, 544, 1362
BtsIMutI	CAGTG	4 cut(s)	519, 573, 1056, 1589
BtuMI	TCGCGA	1 cut(s)	270
Cac8I	GCNNGC	2 cut(s)	10, 1110
CaiI	CAGNNNCTG	1 cut(s)	1591
CciI	TCATGA	3 cut(s)	55, 160, 1681
CciNI	GCGGCCGC	1 cut(s)	84
Cfr10I	RCCGGY	2 cut(s)	204, 1117
Cfr13I	GGNCC	4 cut(s)	525, 1135, 1239, 1319
Cfr42I	CCGCGG	1 cut(s)	84
ClaI	ATCGAT	2 cut(s)	930, 1042
CseI	GACGC	1 cut(s)	580
Csp6I	GTAC	7 cut(s)	47, 69, 376, 382, 1079, 1507, 1656
CspAI	ACCGGT	2 cut(s)	204, 1117
CviAII	CATG	9 cut(s)	25, 56, 161, 1476, 1631, 1637, 1676, 1682, 1688
CviQI	GTAC	7 cut(s)	47, 69, 376, 382, 1079, 1507, 1656
DdeI	CTNAG	3 cut(s)	1188, 1283, 1592
EaeI	YGGCCR	6 cut(s)	84, 644, 1100, 1250, 1350, 1690
EagI	CGGCCG	2 cut(s)	84, 1350
Eam1104I	CTCTTC	2 cut(s)	744, 1382
EarI	CTCTTC	2 cut(s)	744, 1382
Ecl136II	GAGCTC	2 cut(s)	12, 1383
EclXI	CGGCCG	2 cut(s)	84, 1350
Eco24I	GRGCYC	2 cut(s)	14, 1385
Eco31I	GGTCTC	5 cut(s)	252, 284, 1151, 1335, 1450
Eco32I	GATATC	1 cut(s)	1347
Eco47I	GGWCC	3 cut(s)	525, 1135, 1239
Eco52I	CGGCCG	2 cut(s)	84, 1350
Eco53kI	GAGCTC	2 cut(s)	12, 1383
Eco57I	CTGAAG	3 cut(s)	257, 726, 781
Eco88I	CYCGRG	1 cut(s)	821
EcoICRI	GAGCTC	2 cut(s)	12, 1383
EcoO109I	RGGNCCY	1 cut(s)	1239
EcoRI	GAATTC	1 cut(s)	100
EcoRII	CCWGG	1 cut(s)	1692
EcoRV	GATATC	1 cut(s)	1347
EcoT38I	GRGCYC	2 cut(s)	14, 1385
FaeI	CATG	9 cut(s)	28, 59, 164, 1479, 1634, 1640, 1679, 1685, 1691
FaqI	GGGAC	1 cut(s)	545
FatI	CATG	9 cut(s)	24, 55, 160, 1475, 1630, 1636, 1675, 1681, 1687
FbaI	TGATCA	4 cut(s)	145, 1633, 1678, 1684
FokI	GGATG	4 cut(s)	269, 471, 531, 1369
FriOI	GRGCYC	2 cut(s)	14, 1385
FspBI	CTAG	5 cut(s)	317, 717, 1073, 1155, 1226
GsaI	CCCAGC	1 cut(s)	1320
GsuI	CTGGAG	1 cut(s)	582
HaeIII	GGCC	9 cut(s)	86, 211, 405, 646, 1102, 1252, 1321, 1352, 1692
HapII	CCGG	6 cut(s)	15, 175, 205, 276, 1118, 1353
HgaI	GACGC	1 cut(s)	580
Hin1I	GRCGYC	1 cut(s)	591
Hin1II	CATG	9 cut(s)	28, 59, 164, 1479, 1634, 1640, 1679, 1685, 1691
HindIII	AAGCTT	2 cut(s)	456, 900
HinfI	GANTC	4 cut(s)	272, 684, 927, 1466
HpaII	CCGG	6 cut(s)	15, 175, 205, 276, 1118, 1353
HphI	GGTGA	6 cut(s)	43, 119, 473, 901, 1481, 1652
Hpy166II	GTNNAC	2 cut(s)	376, 525
Hpy188I	TCNGA	7 cut(s)	474, 689, 702, 745, 800, 1162, 1380
Hpy8I	GTNNAC	2 cut(s)	376, 525
Hpy99I	CGWCG	1 cut(s)	143
HpyAV	CCTTC	5 cut(s)	53, 395, 416, 1003, 1426
HpyCH4III	ACNGT	3 cut(s)	559, 577, 1726
HpyCH4IV	ACGT	4 cut(s)	141, 372, 848, 1141
HpyCH4V	TGCA	8 cut(s)	354, 841, 913, 1006, 1021, 1395, 1548, 1585
HpyF10VI	GCNNNNNNNGC	2 cut(s)	517, 835
HpyF3I	CTNAG	3 cut(s)	1188, 1283, 1592
HpySE526I	ACGT	4 cut(s)	141, 372, 848, 1141
Hsp92I	GRCGYC	1 cut(s)	591
Hsp92II	CATG	9 cut(s)	28, 59, 164, 1479, 1634, 1640, 1679, 1685, 1691
Ksp22I	TGATCA	4 cut(s)	145, 1633, 1678, 1684
KspI	CCGCGG	1 cut(s)	84
LmnI	GCTCC	6 cut(s)	17, 177, 292, 322, 1380, 1578
Lsp1109I	GCAGC	7 cut(s)	75, 247, 825, 986, 1216, 1458, 1597
LweI	GCATC	3 cut(s)	247, 671, 1051
MaeI	CTAG	5 cut(s)	317, 717, 1073, 1155, 1226
MaeII	ACGT	4 cut(s)	141, 372, 848, 1141
MaeIII	GTNAC	5 cut(s)	31, 479, 571, 592, 1709
MflI	RGATCY	1 cut(s)	607
MhlI	GDGCHC	2 cut(s)	14, 1385
MlsI	TGGCCA	1 cut(s)	1692
MluCI	AATT	8 cut(s)	100, 362, 634, 654, 998, 1177, 1216, 1715
MluNI	TGGCCA	1 cut(s)	1692
MlyI	GAGTC	1 cut(s)	266
MmeI	TCCRAC	2 cut(s)	712, 725
Mox20I	TGGCCA	1 cut(s)	1692
MroXI	GAANNNNTTC	2 cut(s)	753, 791
MscI	TGGCCA	1 cut(s)	1692
MseI	TTAA	1 cut(s)	695
MslI	CAYNNNNRTG	5 cut(s)	29, 153, 1635, 1680, 1686
Msp20I	TGGCCA	1 cut(s)	1692
MspA1I	CMGCKG	2 cut(s)	83, 971
MspI	CCGG	6 cut(s)	15, 175, 205, 276, 1118, 1353
MspR9I	CCNGG	2 cut(s)	1354, 1694
Mva1269I	GAATGC	1 cut(s)	915
MvaI	CCWGG	1 cut(s)	1694
MvnI	CGCG	2 cut(s)	83, 270
MwoI	GCNNNNNNNGC	2 cut(s)	517, 835
NciI	CCSGG	1 cut(s)	1354
NlaIII	CATG	9 cut(s)	28, 59, 164, 1479, 1634, 1640, 1679, 1685, 1691
NlaIV	GGNNCC	1 cut(s)	1240
NmeAIII	GCCGAG	2 cut(s)	1078, 1347
NmuCI	GTSAC	4 cut(s)	31, 479, 571, 592
NotI	GCGGCCGC	1 cut(s)	84
NruI	TCGCGA	1 cut(s)	270
NspI	RCATGY	1 cut(s)	1479
OliI	CACNNNNGTG	1 cut(s)	153
PaeR7I	CTCGAG	1 cut(s)	821
PagI	TCATGA	3 cut(s)	55, 160, 1681
PciI	ACATGT	1 cut(s)	1475
PcsI	WCGNNNNNNNCGW	1 cut(s)	147
PctI	GAATGC	1 cut(s)	915
PdmI	GAANNNNTTC	2 cut(s)	753, 791
PfeI	GAWTC	3 cut(s)	684, 927, 1466
PinAI	ACCGGT	2 cut(s)	204, 1117
Ple19I	CGATCG	2 cut(s)	934, 1558
PleI	GAGTC	1 cut(s)	266
PpsI	GAGTC	1 cut(s)	266
PpuMI	RGGWCCY	1 cut(s)	1239
PscI	ACATGT	1 cut(s)	1475
PshAI	GACNNNNGTC	1 cut(s)	276
Psp124BI	GAGCTC	2 cut(s)	14, 1385
Psp1406I	AACGTT	1 cut(s)	848
Psp5II	RGGWCCY	1 cut(s)	1239
Psp6I	CCWGG	1 cut(s)	1692
PspFI	CCCAGC	1 cut(s)	1316
PspGI	CCWGG	1 cut(s)	1692
PspN4I	GGNNCC	1 cut(s)	1240
PspPI	GGNCC	4 cut(s)	525, 1135, 1239, 1319
PspPPI	RGGWCCY	1 cut(s)	1239
PsrI	GAACNNNNNNTAC	2 cut(s)	30, 62
PstNI	CAGNNNCTG	1 cut(s)	1591
PsuI	RGATCY	1 cut(s)	607
PvuI	CGATCG	2 cut(s)	934, 1558
RruI	TCGCGA	1 cut(s)	270
RsaI	GTAC	7 cut(s)	48, 70, 377, 383, 1080, 1508, 1657
RsaNI	GTAC	7 cut(s)	47, 69, 376, 382, 1079, 1507, 1656
RseI	CAYNNNNRTG	5 cut(s)	29, 153, 1635, 1680, 1686
SacI	GAGCTC	2 cut(s)	14, 1385
SacII	CCGCGG	1 cut(s)	84
SaqAI	TTAA	1 cut(s)	695
Sau96I	GGNCC	4 cut(s)	525, 1135, 1239, 1319
ScaI	AGTACT	2 cut(s)	48, 70
SchI	GAGTC	1 cut(s)	266
ScrFI	CCNGG	2 cut(s)	1354, 1694
SduI	GDGCHC	2 cut(s)	14, 1385
SfaNI	GCATC	3 cut(s)	247, 671, 1051
Sfr274I	CTCGAG	1 cut(s)	821
Sfr303I	CCGCGG	1 cut(s)	84
SgrBI	CCGCGG	1 cut(s)	84
SinI	GGWCC	3 cut(s)	525, 1135, 1239
SlaI	CTCGAG	1 cut(s)	821
SmiMI	CAYNNNNRTG	5 cut(s)	29, 153, 1635, 1680, 1686
SmlI	CTYRAG	2 cut(s)	821, 1243
SmoI	CTYRAG	2 cut(s)	821, 1243
SpeI	ACTAGT	2 cut(s)	1072, 1154
Sse9I	AATT	8 cut(s)	100, 362, 634, 654, 998, 1177, 1216, 1715
SspI	AATATT	1 cut(s)	1528
SspMI	CTAG	5 cut(s)	317, 717, 1073, 1155, 1226
SstI	GAGCTC	2 cut(s)	14, 1385
StyD4I	CCNGG	2 cut(s)	1352, 1692
TaaI	ACNGT	3 cut(s)	559, 577, 1726
TaiI	ACGT	4 cut(s)	144, 375, 851, 1144
TaqI	TCGA	9 cut(s)	98, 366, 822, 930, 965, 1031, 1042, 1050, 1385
TasI	AATT	8 cut(s)	100, 362, 634, 654, 998, 1177, 1216, 1715
TatI	WGTACW	4 cut(s)	46, 68, 375, 1506
TauI	GCSGC	5 cut(s)	86, 89, 974, 1067, 1209
TfiI	GAWTC	3 cut(s)	684, 927, 1466
Tru1I	TTAA	1 cut(s)	695
Tru9I	TTAA	1 cut(s)	695
TscAI	CASTG	4 cut(s)	519, 580, 1063, 1596
TseFI	GTSAC	4 cut(s)	31, 479, 571, 592
TseI	GCWGC	7 cut(s)	63, 260, 838, 974, 1229, 1446, 1585
Tsp45I	GTSAC	4 cut(s)	31, 479, 571, 592
TspDTI	ATGAA	5 cut(s)	44, 72, 608, 612, 1641
TspGWI	ACGGA	3 cut(s)	1148, 1274, 1673
TspRI	CASTG	4 cut(s)	519, 580, 1063, 1596
VpaK11BI	GGWCC	3 cut(s)	525, 1135, 1239
XapI	RAATTY	4 cut(s)	100, 362, 654, 1177
XceI	RCATGY	1 cut(s)	1479
XcmI	CCANNNNNNNNNTGG	1 cut(s)	519
XhoI	CTCGAG	1 cut(s)	821
XmnI	GAANNNNTTC	2 cut(s)	753, 791
XspI	CTAG	5 cut(s)	317, 717, 1073, 1155, 1226
ZrmI	AGTACT	2 cut(s)	48, 70

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.