Rh6DG317000

Peptidyl-prolyl cis-trans isomerase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0002895
Physical Location & Seq
Reverse (-)
51939161 .. 51944941
5781 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG317000.1

Sequence Viewer

Length: 2118 bp
ATGCGGGGGAATACGCGTTGCCAAAGTGAAGCCATCGTCTCTCTGTCACTCTCATCTCTCACTCGCCACCGCCGTATCTGCTTCCTCCGAATCCGGGTCCGACCCGACCCGAACTCCAAGGAGGAAGATATGAGCAAGAAAGCGAACCCCAGTGTCTTCTTAGATGTATCCATTGATGGGGCCCCGACGGAAAGAATTGTGATTGAGCTTTTTGCGGATGTTGTGCCTAAGACAGCAGAAAATTTTAGGGCTCTCTGTACAGGTGAGAAGGGCATTGGAAAGTCTACAGGCAAACCTCTTCACTACAAAGGAACGCAATTTCATCGAATTATCAAAGGATTTATGGCGCAAGGTGGTGATTTTTCAAAGGGGAACGGAACTGGCGGAGAAAGTATTTATGGAGGAAAGTTTGCAGATGAAAATTTTAAATTGAAGCATGATAGACCCGGCCTTCTGTCTATGGCAAATGGCGGTCCAAATACAAATGGGTCTCAGTTCTTTATAATTTTCAATCCTACACCACATCTTAACGGGAAACATGTTGTTTTTGGAAAGGTTACAAAGGGAATAGATGTAGTTCAGAAAATTGAGAAAGCTGGAACAGATCAAGGAAACCCTTCGCAACTGGTGAAAATTGTAGACTGTGGTGAAGTTGAGAATAGTAAAATCACCAGTGCAACAGAGAAAGAGAAAGGGAAAAAGAGGAAATCAGTGAAGATTTCATCATCTGAGGATAGTTCTGATGAGGAAGTGAGAGGAAGGCGTAAAAAATCTCTGAAGGAAAAGAGGAAGAAAAGAAAGAGATATTCTTCGTCTGATTCCTCAGACATGTCAGATTCTTATTCTTCAGATTCAGATTCACATTCACATTCAAGTTCGCTTAGTGATGAAAGGCGTAGGAAGAGAAAAGCCGTTAAAAGAGATAAGCACTACCGTTCCAGGAAAAGAAGAGATGGAAAAAAAGAGAGGAAGAGAGGCCGACATGCCAAACAATCAAGGCGCAAGTCAAAACGGAGGTCAGAAAGTTCAAGTGATACTGAAAGTGAGAGTACTAGAAGCAGCGCCAGCAGTTCTGATGATGATAAAGATGGTCATCGCGTTTCTTCTCGTAAAAACGGCAATTTAAAGAAGGCAGAAAATAAACTTCCAAGAAATCTTGATGTGGTAAAGCAATCCCCACAAGGAGGGAAAAAATCTATTGAACAGAGGAAGAATCTTGATAGAAAGAAAATTGGGGACAACTCATCCGAGGAAGAAGGTGAATTTTCTCCAAAGAATGGTGTTCATGTAACTAACGGGCATAATGCAGAAGCTAAAACTGCTAATCAACAGTCCTACTCAGATGACTCGAACAAGCCCAGCAGAAGTCCATCACACAGTGCAAGTCCTAAGAGGATTACTGGCAGAAGTCCACCAAGAAATTCTCTTGAGCAAAAGAGAGGAAGGCCTTCTAGGAGTCCATTGGGTAGTCCTGTCCGGAAAGCTCCTGAACCTTCTACTTCAAACCACGAACAGGGTTTGTCAAGAAGCACTTCTCCAAATGGCACTCCCAAGCGCATTAGGAAAGGACGTGGTTTCACTGATCAGTATGCCTTTGCACGTCGCTACCGTACTCCATCTCCAGAGCGTTCACGGGGTAACTCTTATCGTTACGGTGGAAGAGACATTTATAGAAGTAACCGTGATAGGTACTCAAGCTACCGGAATTATTCTGAGCGCTCACAACCTCGACGTTTCCGGAGCCCACCAAGAGGCAGGAGTCCTCCCAGATCTCGAAGCCAGAGAAGTCGAAGTAGGAGCATATCTCGGAGCCCTGGTGGATATCGTGGCCGGTATAGGGACCGCAGTCGCAGCCGTAGTCGTAGTCCAGCAGATCGACCTCCTATAAGTGACAGATTAAAATCCCGCCTTGGACCTCGCATTGGTGATCAGCGTTCTCCAGACAGAGGTAGGGCTAAGTCCAGGTCGAGAAGCCGAGGGGTATCTCATTCCAGATCTCCCGATGCTACACCTAAGCGTCGTAACAGGACGACTAGGTCTCCCAGTAGGTCAAGATCAAGCTCTCCAGCTGAACAAAGGGGGTTGGTCTCATATGACGATATCAGTCCTGAATCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pro_isomerase

Protein Analysis

705

Amino Acids

79.23

Weight (kDa)

10.95

Isoelectric Point (pI)

78.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pro_isomerase PF00160 54 - 216 1.3e-49 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 503
AasI GACNNNNNNGTC 1 cut(s) 2035
AccB7I CCANNNNNTGG 1 cut(s) 1277
AccI GTMKAC 2 cut(s) 284, 639
AccII CGCG 2 cut(s) 16, 1098
AccIII TCCGGA 2 cut(s) 1476, 1737
AciI CCGC 7 cut(s) 4, 70, 215, 384, 471, 1843, 1906
AcoI YGGCCR 1 cut(s) 1828
AcsI RAATTY 4 cut(s) 241, 421, 1262, 1420
AcuI CTGAAG 2 cut(s) 797, 831
AdeI CACNNNGTG 1 cut(s) 1379
AfaI GTAC 4 cut(s) 259, 1051, 1612, 1691
AfeI AGCGCT 1 cut(s) 1718
AfiI CCNNNNNNNGG 9 cut(s) 94, 177, 1184, 1277, 1513, 1751, 1837, 1922, 1946
AflIII ACRYGT 3 cut(s) 14, 538, 828
AgsI TTSAA 7 cut(s) 366, 433, 511, 873, 1029, 1202, 1503
AjiI CACGTC 2 cut(s) 1571, 1601
AjnI CCWGG 3 cut(s) 938, 1813, 1961
AluBI AGCT 7 cut(s) 208, 596, 1313, 1484, 1698, 2061, 2069
AluI AGCT 7 cut(s) 208, 596, 1313, 1484, 1698, 2061, 2069
Alw26I GTCTC 5 cut(s) 43, 495, 1656, 2043, 2092
Aor13HI TCCGGA 2 cut(s) 1476, 1737
Aor51HI AGCGCT 1 cut(s) 1718
AoxI GGCC 5 cut(s) 180, 448, 976, 1445, 1828
ApaI GGGCCC 1 cut(s) 184
ApeKI GCWGC 2 cut(s) 1059, 1851
ApoI RAATTY 4 cut(s) 241, 421, 1262, 1420
ArsI GACNNNNNNTTYG 2 cut(s) 1001, 1033
Asp700I GAANNNNTTC 3 cut(s) 616, 1447, 1531
AspLEI GCGC 5 cut(s) 349, 1002, 1064, 1557, 1719
AspS9I GGNCC 6 cut(s) 97, 180, 181, 473, 1840, 1913
AsuC2I CCSGG 2 cut(s) 95, 447
AsuHPI GGTGA 7 cut(s) 275, 368, 640, 659, 661, 1271, 1937
AvaII GGWCC 4 cut(s) 97, 473, 1840, 1913
BaeGI GKGCMC 1 cut(s) 184
BaeI ACNNNNGTAYC 2 cut(s) 58, 91
BanII GRGCYC 4 cut(s) 184, 253, 1745, 1814
BbsI GAAGAC 1 cut(s) 148
BbvI GCAGC 2 cut(s) 1071, 1863
BccI CCATC 6 cut(s) 41, 170, 947, 1082, 1378, 1624
BceAI ACGGC 4 cut(s) 57, 896, 1132, 1839
BcgI CGANNNNNNTGC 2 cut(s) 305, 339
BciT130I CCWGG 3 cut(s) 940, 1815, 1963
BciVI GTATCC 1 cut(s) 178
BclI TGATCA 2 cut(s) 1582, 1927
BcnI CCSGG 2 cut(s) 95, 447
BcoDI GTCTC 5 cut(s) 43, 495, 1656, 2043, 2092
BfaI CTAG 3 cut(s) 1053, 1452, 2034
BfmI CTRYAG 1 cut(s) 285
BfoI RGCGCY 2 cut(s) 1065, 1720
BfuI GTATCC 1 cut(s) 178
BglII AGATCT 2 cut(s) 1769, 1994
BisI GCNGC 2 cut(s) 1060, 1852
BlsI GCNGC 2 cut(s) 1061, 1853
BmcAI AGTACT 1 cut(s) 1051
Bme1390I CCNGG 5 cut(s) 95, 447, 940, 1815, 1963
Bme18I GGWCC 4 cut(s) 97, 473, 1840, 1913
BmgBI CACGTC 2 cut(s) 1571, 1601
BmgT120I GGNCC 6 cut(s) 97, 180, 181, 473, 1840, 1913
BmiI GGNNCC 7 cut(s) 98, 181, 182, 183, 1742, 1811, 1841
BmrFI CCNGG 5 cut(s) 95, 447, 940, 1815, 1963
BmrI ACTGGG 2 cut(s) 144, 2037
BmsI GCATC 1 cut(s) 1993
BmuI ACTGGG 2 cut(s) 144, 2037
BoxI GACNNNNGTC 1 cut(s) 1845
BpiI GAAGAC 1 cut(s) 148
BplI GAGNNNNNCTC 2 cut(s) 1789, 1821
BpmI CTGGAG 3 cut(s) 1605, 1923, 2049
Bpu10I CCTNAGC 1 cut(s) 2013
BpuEI CTTGAG 2 cut(s) 1448, 1678
BpuMI CCSGG 2 cut(s) 95, 447
BsaBI GATNNNNATC 2 cut(s) 1092, 1900
BsaI GGTCTC 3 cut(s) 495, 2043, 2092
BsaJI CCNNGG 5 cut(s) 117, 1248, 1813, 1909, 1975
BsaWI WCCGGW 3 cut(s) 1476, 1701, 1737
BsaXI ACNNNNNCTCC 8 cut(s) 98, 128, 1603, 1633, 1801, 1831, 2023, 2053
Bsc4I CCNNNNNNNGG 9 cut(s) 94, 177, 1184, 1277, 1513, 1751, 1837, 1922, 1946
Bse118I RCCGGY 1 cut(s) 1830
Bse1I ACTGG 6 cut(s) 150, 385, 630, 672, 1405, 2043
Bse8I GATNNNNATC 2 cut(s) 1092, 1900
BseAI TCCGGA 2 cut(s) 1476, 1737
BseBI CCWGG 3 cut(s) 940, 1815, 1963
BseDI CCNNGG 5 cut(s) 117, 1248, 1813, 1909, 1975
BseGI GGATG 2 cut(s) 223, 1244
BseJI GATNNNNATC 2 cut(s) 1092, 1900
BseLI CCNNNNNNNGG 9 cut(s) 94, 177, 1184, 1277, 1513, 1751, 1837, 1922, 1946
BseMII CTCAG 5 cut(s) 506, 720, 837, 1353, 1704
BseNI ACTGG 6 cut(s) 150, 385, 630, 672, 1405, 2043
BseSI GKGCMC 1 cut(s) 184
BseXI GCAGC 2 cut(s) 1071, 1863
BseYI CCCAGC 1 cut(s) 1358
Bsh1236I CGCG 2 cut(s) 16, 1098
BshFI GGCC 5 cut(s) 182, 450, 978, 1447, 1830
BsiSI CCGG 6 cut(s) 94, 447, 1477, 1702, 1738, 1831
BslFI GGGAC 2 cut(s) 1250, 1853
BslI CCNNNNNNNGG 9 cut(s) 94, 177, 1184, 1277, 1513, 1751, 1837, 1922, 1946
BsmAI GTCTC 5 cut(s) 43, 495, 1656, 2043, 2092
BsmBI CGTCTC 1 cut(s) 43
BsmFI GGGAC 2 cut(s) 1250, 1853
BsnI GGCC 5 cut(s) 182, 450, 978, 1447, 1830
Bso31I GGTCTC 3 cut(s) 495, 2043, 2092
Bsp120I GGGCCC 1 cut(s) 180
Bsp1286I GDGCHC 4 cut(s) 184, 253, 1745, 1814
Bsp13I TCCGGA 2 cut(s) 1476, 1737
Bsp1407I TGTACA 1 cut(s) 257
Bsp143I GATC 7 cut(s) 604, 1582, 1769, 1873, 1927, 1994, 2054
BspACI CCGC 7 cut(s) 4, 70, 215, 384, 471, 1843, 1906
BspANI GGCC 5 cut(s) 182, 450, 978, 1447, 1830
BspCNI CTCAG 5 cut(s) 505, 721, 836, 1352, 1705
BspEI TCCGGA 2 cut(s) 1476, 1737
BspFNI CGCG 2 cut(s) 16, 1098
BspLI GGNNCC 7 cut(s) 98, 181, 182, 183, 1742, 1811, 1841
BspTNI GGTCTC 3 cut(s) 495, 2043, 2092
BsrFI RCCGGY 1 cut(s) 1830
BsrGI TGTACA 1 cut(s) 257
BsrI ACTGG 6 cut(s) 150, 385, 630, 672, 1405, 2043
BssAI RCCGGY 1 cut(s) 1830
BssECI CCNNGG 5 cut(s) 117, 1248, 1813, 1909, 1975
BssMI GATC 7 cut(s) 604, 1582, 1769, 1873, 1927, 1994, 2054
BssT1I CCWWGG 2 cut(s) 117, 1909
Bst2UI CCWGG 3 cut(s) 940, 1815, 1963
Bst4CI ACNGT 7 cut(s) 644, 935, 1332, 1379, 1610, 1655, 1682
Bst6I CTCTTC 5 cut(s) 303, 896, 943, 965, 1654
BstAUI TGTACA 1 cut(s) 257
BstC8I GCNNGC 1 cut(s) 1066
BstF5I GGATG 2 cut(s) 223, 1244
BstFNI CGCG 2 cut(s) 16, 1098
BstH2I RGCGCY 2 cut(s) 1065, 1720
BstHHI GCGC 5 cut(s) 349, 1002, 1064, 1557, 1719
BstKTI GATC 7 cut(s) 607, 1585, 1772, 1876, 1930, 1997, 2057
BstMAI GTCTC 5 cut(s) 43, 495, 1656, 2043, 2092
BstMBI GATC 7 cut(s) 604, 1582, 1769, 1873, 1927, 1994, 2054
BstMWI GCNNNNNNNGC 4 cut(s) 78, 1065, 1319, 1851
BstNI CCWGG 3 cut(s) 940, 1815, 1963
BstNSI RCATGY 3 cut(s) 542, 832, 986
BstPAI GACNNNNGTC 1 cut(s) 1845
BstSCI CCNGG 5 cut(s) 93, 445, 938, 1813, 1961
BstSFI CTRYAG 1 cut(s) 285
BstSLI GKGCMC 1 cut(s) 184
BstUI CGCG 2 cut(s) 16, 1098
BstV1I GCAGC 2 cut(s) 1071, 1863
BstV2I GAAGAC 1 cut(s) 148
BstX2I RGATCY 2 cut(s) 1769, 1994
BstYI RGATCY 2 cut(s) 1769, 1994
BsuI GTATCC 1 cut(s) 178
BsuRI GGCC 5 cut(s) 182, 450, 978, 1447, 1830
BtgZI GCGATG 1 cut(s) 1079
BtrI CACGTC 2 cut(s) 1571, 1601
BtsCI GGATG 2 cut(s) 223, 1244
BtsIMutI CAGTG 5 cut(s) 157, 679, 717, 1384, 1578
Cac8I GCNNGC 1 cut(s) 1066
CfoI GCGC 5 cut(s) 349, 1002, 1064, 1557, 1719
Cfr10I RCCGGY 1 cut(s) 1830
Cfr13I GGNCC 6 cut(s) 97, 180, 181, 473, 1840, 1913
CseI GACGC 1 cut(s) 2006
Csp6I GTAC 4 cut(s) 258, 1050, 1611, 1690
CviAII CATG 5 cut(s) 437, 539, 829, 983, 1286
CviQI GTAC 4 cut(s) 258, 1050, 1611, 1690
DpnI GATC 7 cut(s) 606, 1584, 1771, 1875, 1929, 1996, 2056
DpnII GATC 7 cut(s) 604, 1582, 1769, 1873, 1927, 1994, 2054
DraI TTTAAA 2 cut(s) 427, 1125
DraIII CACNNNGTG 1 cut(s) 1379
DrdI GACNNNNNNGTC 1 cut(s) 2035
DseDI GACNNNNNNGTC 1 cut(s) 2035
EaeI YGGCCR 1 cut(s) 1828
Eam1104I CTCTTC 5 cut(s) 303, 896, 943, 965, 1654
EarI CTCTTC 5 cut(s) 303, 896, 943, 965, 1654
EciI GGCGGA 1 cut(s) 399
Eco130I CCWWGG 2 cut(s) 117, 1909
Eco147I AGGCCT 1 cut(s) 1447
Eco24I GRGCYC 4 cut(s) 184, 253, 1745, 1814
Eco31I GGTCTC 3 cut(s) 495, 2043, 2092
Eco32I GATATC 2 cut(s) 1823, 2101
Eco47I GGWCC 4 cut(s) 97, 473, 1840, 1913
Eco47III AGCGCT 1 cut(s) 1718
Eco57I CTGAAG 2 cut(s) 797, 831
EcoO109I RGGNCCY 2 cut(s) 180, 181
EcoRII CCWGG 3 cut(s) 938, 1813, 1961
EcoRV GATATC 2 cut(s) 1823, 2101
EcoT14I CCWWGG 2 cut(s) 117, 1909
EcoT38I GRGCYC 4 cut(s) 184, 253, 1745, 1814
ErhI CCWWGG 2 cut(s) 117, 1909
Esp3I CGTCTC 1 cut(s) 43
FaeI CATG 5 cut(s) 440, 542, 832, 986, 1289
FalI AAGNNNNNCTT 2 cut(s) 1516, 1548
FaqI GGGAC 2 cut(s) 1250, 1853
FatI CATG 5 cut(s) 436, 538, 828, 982, 1285
FauI CCCGC 1 cut(s) 1913
FauNDI CATATG 1 cut(s) 2092
FbaI TGATCA 2 cut(s) 1582, 1927
FblI GTMKAC 2 cut(s) 284, 639
Fnu4HI GCNGC 2 cut(s) 1060, 1852
FokI GGATG 2 cut(s) 230, 1231
FriOI GRGCYC 4 cut(s) 184, 253, 1745, 1814
Fsp4HI GCNGC 2 cut(s) 1060, 1852
FspBI CTAG 3 cut(s) 1053, 1452, 2034
GlaI GCGC 5 cut(s) 348, 1001, 1063, 1556, 1718
GluI GCNGC 2 cut(s) 1060, 1852
GsaI CCCAGC 1 cut(s) 1362
GsuI CTGGAG 3 cut(s) 1605, 1923, 2049
HaeII RGCGCY 2 cut(s) 1065, 1720
HaeIII GGCC 5 cut(s) 182, 450, 978, 1447, 1830
HapII CCGG 6 cut(s) 94, 447, 1477, 1702, 1738, 1831
HgaI GACGC 1 cut(s) 2006
HhaI GCGC 5 cut(s) 349, 1002, 1064, 1557, 1719
Hin1II CATG 5 cut(s) 440, 542, 832, 986, 1289
Hin6I GCGC 5 cut(s) 347, 1000, 1062, 1555, 1717
HinP1I GCGC 5 cut(s) 347, 1000, 1062, 1555, 1717
HpaII CCGG 6 cut(s) 94, 447, 1477, 1702, 1738, 1831
HphI GGTGA 7 cut(s) 275, 368, 640, 659, 661, 1271, 1937
Hpy166II GTNNAC 4 cut(s) 285, 640, 1412, 1631
Hpy8I GTNNAC 4 cut(s) 285, 640, 1412, 1631
Hpy99I CGWCG 4 cut(s) 190, 1605, 1734, 2022
HpyCH4III ACNGT 7 cut(s) 644, 935, 1332, 1379, 1610, 1655, 1682
HpyCH4IV ACGT 3 cut(s) 1570, 1600, 1732
HpyCH4V TGCA 5 cut(s) 413, 677, 1307, 1382, 1598
HpyF10VI GCNNNNNNNGC 4 cut(s) 78, 1065, 1319, 1851
HpySE526I ACGT 3 cut(s) 1570, 1600, 1732
Hsp92II CATG 5 cut(s) 440, 542, 832, 986, 1289
HspAI GCGC 5 cut(s) 347, 1000, 1062, 1555, 1717
Kpn2I TCCGGA 2 cut(s) 1476, 1737
Ksp22I TGATCA 2 cut(s) 1582, 1927
Kzo9I GATC 7 cut(s) 604, 1582, 1769, 1873, 1927, 1994, 2054
LmnI GCTCC 4 cut(s) 1489, 1740, 1797, 1809
Lsp1109I GCAGC 2 cut(s) 1071, 1863
LweI GCATC 1 cut(s) 1993
MaeI CTAG 3 cut(s) 1053, 1452, 2034
MaeII ACGT 3 cut(s) 1570, 1600, 1732
MaeIII GTNAC 8 cut(s) 45, 556, 1288, 1637, 1649, 1676, 1889, 2021
MalI GATC 7 cut(s) 606, 1584, 1771, 1875, 1929, 1996, 2056
MboI GATC 7 cut(s) 604, 1582, 1769, 1873, 1927, 1994, 2054
MflI RGATCY 2 cut(s) 1769, 1994
MhlI GDGCHC 4 cut(s) 184, 253, 1745, 1814
MluI ACGCGT 1 cut(s) 14
MlyI GAGTC 3 cut(s) 1340, 1465, 1768
MmeI TCCRAC 1 cut(s) 124
MroI TCCGGA 2 cut(s) 1476, 1737
MroXI GAANNNNTTC 3 cut(s) 616, 1447, 1531
MseI TTAA 5 cut(s) 426, 528, 915, 1124, 1898
MspA1I CMGCKG 1 cut(s) 2069
MspI CCGG 6 cut(s) 94, 447, 1477, 1702, 1738, 1831
MspR9I CCNGG 5 cut(s) 95, 447, 940, 1815, 1963
MvaI CCWGG 3 cut(s) 940, 1815, 1963
MvnI CGCG 2 cut(s) 16, 1098
MwoI GCNNNNNNNGC 4 cut(s) 78, 1065, 1319, 1851
NciI CCSGG 2 cut(s) 95, 447
NdeI CATATG 1 cut(s) 2092
NdeII GATC 7 cut(s) 604, 1582, 1769, 1873, 1927, 1994, 2054
NlaIII CATG 5 cut(s) 440, 542, 832, 986, 1289
NlaIV GGNNCC 7 cut(s) 98, 181, 182, 183, 1742, 1811, 1841
NmeAIII GCCGAG 1 cut(s) 2000
NmuCI GTSAC 2 cut(s) 45, 1889
NspI RCATGY 3 cut(s) 542, 832, 986
PceI AGGCCT 1 cut(s) 1447
PciI ACATGT 2 cut(s) 538, 828
PcsI WCGNNNNNNNCGW 2 cut(s) 70, 1606
PdmI GAANNNNTTC 3 cut(s) 616, 1447, 1531
PfeI GAWTC 7 cut(s) 90, 818, 836, 851, 857, 1213, 2111
PflFI GACNNNGTC 1 cut(s) 2035
PflMI CCANNNNNTGG 1 cut(s) 1277
PfoI TCCNGGA 1 cut(s) 938
PkrI GCNGC 2 cut(s) 1061, 1853
PleI GAGTC 3 cut(s) 1340, 1464, 1767
PpsI GAGTC 3 cut(s) 1340, 1464, 1767
PscI ACATGT 2 cut(s) 538, 828
PshAI GACNNNNGTC 1 cut(s) 1845
PsiI TTATAA 1 cut(s) 503
Psp6I CCWGG 3 cut(s) 938, 1813, 1961
PspFI CCCAGC 1 cut(s) 1358
PspGI CCWGG 3 cut(s) 938, 1813, 1961
PspN4I GGNNCC 7 cut(s) 98, 181, 182, 183, 1742, 1811, 1841
PspOMI GGGCCC 1 cut(s) 180
PspPI GGNCC 6 cut(s) 97, 180, 181, 473, 1840, 1913
PsuI RGATCY 2 cut(s) 1769, 1994
PsyI GACNNNGTC 1 cut(s) 2035
PvuII CAGCTG 1 cut(s) 2069
RsaI GTAC 4 cut(s) 259, 1051, 1612, 1691
RsaNI GTAC 4 cut(s) 258, 1050, 1611, 1690
SaqAI TTAA 5 cut(s) 426, 528, 915, 1124, 1898
SatI GCNGC 2 cut(s) 1060, 1852
Sau3AI GATC 7 cut(s) 604, 1582, 1769, 1873, 1927, 1994, 2054
Sau96I GGNCC 6 cut(s) 97, 180, 181, 473, 1840, 1913
ScaI AGTACT 1 cut(s) 1051
SchI GAGTC 3 cut(s) 1340, 1465, 1768
ScrFI CCNGG 5 cut(s) 95, 447, 940, 1815, 1963
SduI GDGCHC 4 cut(s) 184, 253, 1745, 1814
SfaNI GCATC 1 cut(s) 1993
SfcI CTRYAG 1 cut(s) 285
SinI GGWCC 4 cut(s) 97, 473, 1840, 1913
SmlI CTYRAG 2 cut(s) 1427, 1693
SmoI CTYRAG 2 cut(s) 1427, 1693
SseBI AGGCCT 1 cut(s) 1447
SsiI CCGC 7 cut(s) 4, 70, 215, 384, 471, 1843, 1906
SspMI CTAG 3 cut(s) 1053, 1452, 2034
StuI AGGCCT 1 cut(s) 1447
StyD4I CCNGG 5 cut(s) 93, 445, 938, 1813, 1961
StyI CCWWGG 2 cut(s) 117, 1909
TaaI ACNGT 7 cut(s) 644, 935, 1332, 1379, 1610, 1655, 1682
TaiI ACGT 3 cut(s) 1573, 1603, 1735
TaqI TCGA 7 cut(s) 325, 1349, 1729, 1774, 1789, 1876, 1967
TatI WGTACW 2 cut(s) 257, 1049
TfiI GAWTC 7 cut(s) 90, 818, 836, 851, 857, 1213, 2111
Tru1I TTAA 5 cut(s) 426, 528, 915, 1124, 1898
Tru9I TTAA 5 cut(s) 426, 528, 915, 1124, 1898
TscAI CASTG 5 cut(s) 157, 679, 717, 1384, 1585
TseFI GTSAC 2 cut(s) 45, 1889
TseI GCWGC 2 cut(s) 1059, 1851
Tsp45I GTSAC 2 cut(s) 45, 1889
TspDTI ATGAA 5 cut(s) 311, 432, 711, 903, 1274
TspGWI ACGGA 3 cut(s) 203, 390, 1027
TspRI CASTG 5 cut(s) 157, 679, 717, 1384, 1585
Tth111I GACNNNGTC 1 cut(s) 2035
Van91I CCANNNNNTGG 1 cut(s) 1277
VpaK11BI GGWCC 4 cut(s) 97, 473, 1840, 1913
XapI RAATTY 4 cut(s) 241, 421, 1262, 1420
XceI RCATGY 3 cut(s) 542, 832, 986
XmiI GTMKAC 2 cut(s) 284, 639
XmnI GAANNNNTTC 3 cut(s) 616, 1447, 1531
XspI CTAG 3 cut(s) 1053, 1452, 2034
ZrmI AGTACT 1 cut(s) 1051
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.