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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G33740 AT4G33740 AT4G33740 AT4G33740 AT4G33740 |
| fragaria_vesca | FvH4_2g02971 FvH4_2g02971 |
| malus_domestica | MD05G1108600.v1.1 MD10G1112600.v1.1 |
| prunus_persica | Prupe.8G152300_v2.0.a1 |
| pyrus_communis | pycom05g10460 pycom10g09740 |
| rosa_chinensis | RchiOBHm_Chr1g0336871 RchiOBHm_Chr6g0247781 |
| rosa_laevigata | RLG00000015180 RLG00000029328 |
| rosa_multiflora | Rmu_sc0001983.1_g000010 Rmu_sc0004920.1_g000004 Rmu_sc0009569.1_g000009 Rmu_sc0018000.1_g000001 |
| rosa_roxburghii | Rroxscaffold_180G00433250 Rroxscaffold_4G00315280 Rroxscaffold_7G00213660 |
| rosa_rugosa | Rorug01G0128600 Rorug05G0528500 |
| rosa_samantha | Rh1AG149300 Rh1BG117700 Rh1CG140500 Rh1DG156600 Rh6AG043600 Rh6BG038300 Rh6CG037100 Rh6DG034200 |
| rosa_wichuraiana | Rw1G012080 Rw6G003780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 782 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1354 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 200 |
| AccBSI | CCGCTC | 1 cut(s) | 1442 |
| AccI | GTMKAC | 1 cut(s) | 339 |
| AccII | CGCG | 2 cut(s) | 344, 1523 |
| AciI | CCGC | 4 cut(s) | 10, 557, 953, 1440 |
| AclWI | GGATC | 6 cut(s) | 330, 389, 402, 438, 1417, 1529 |
| AcsI | RAATTY | 3 cut(s) | 572, 667, 1270 |
| AcuI | CTGAAG | 2 cut(s) | 318, 455 |
| AfaI | GTAC | 4 cut(s) | 895, 1036, 1069, 1465 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 181, 200, 1010, 1509 |
| AflII | CTTAAG | 1 cut(s) | 1369 |
| AgsI | TTSAA | 3 cut(s) | 227, 861, 1275 |
| AjiI | CACGTC | 1 cut(s) | 1201 |
| AjnI | CCWGG | 1 cut(s) | 1101 |
| AluBI | AGCT | 7 cut(s) | 190, 506, 911, 960, 1043, 1244, 1388 |
| AluI | AGCT | 7 cut(s) | 190, 506, 911, 960, 1043, 1244, 1388 |
| Alw21I | GWGCWC | 1 cut(s) | 962 |
| Alw26I | GTCTC | 5 cut(s) | 378, 476, 1130, 1270, 1421 |
| AlwI | GGATC | 6 cut(s) | 330, 389, 402, 438, 1417, 1529 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1139, 1247 |
| Ama87I | CYCGRG | 1 cut(s) | 80 |
| AoxI | GGCC | 1 cut(s) | 762 |
| ApeKI | GCWGC | 4 cut(s) | 76, 1244, 1385, 1646 |
| ApoI | RAATTY | 3 cut(s) | 572, 667, 1270 |
| AspLEI | GCGC | 2 cut(s) | 346, 1156 |
| AspS9I | GGNCC | 1 cut(s) | 763 |
| AsuHPI | GGTGA | 9 cut(s) | 61, 197, 635, 647, 991, 1042, 1075, 1499, 1555 |
| AvaI | CYCGRG | 1 cut(s) | 80 |
| BamHI | GGATCC | 1 cut(s) | 394 |
| BanII | GRGCYC | 1 cut(s) | 962 |
| BauI | CACGAG | 1 cut(s) | 720 |
| BbsI | GAAGAC | 2 cut(s) | 270, 291 |
| Bbv12I | GWGCWC | 1 cut(s) | 962 |
| BbvI | GCAGC | 3 cut(s) | 63, 1231, 1397 |
| BccI | CCATC | 7 cut(s) | 599, 614, 926, 970, 1172, 1298, 1394 |
| BciT130I | CCWGG | 1 cut(s) | 1103 |
| BciVI | GTATCC | 1 cut(s) | 1291 |
| BclI | TGATCA | 3 cut(s) | 3, 997, 1203 |
| BcoDI | GTCTC | 5 cut(s) | 378, 476, 1130, 1270, 1421 |
| BfaI | CTAG | 2 cut(s) | 753, 845 |
| BfmI | CTRYAG | 1 cut(s) | 62 |
| BfrI | CTTAAG | 1 cut(s) | 1369 |
| BfuI | GTATCC | 1 cut(s) | 1291 |
| BglII | AGATCT | 1 cut(s) | 1373 |
| BisI | GCNGC | 5 cut(s) | 77, 1245, 1386, 1440, 1647 |
| BlsI | GCNGC | 5 cut(s) | 78, 1246, 1387, 1441, 1648 |
| Bme1390I | CCNGG | 1 cut(s) | 1103 |
| BmeT110I | CYCGRG | 1 cut(s) | 80 |
| BmgBI | CACGTC | 1 cut(s) | 1201 |
| BmgT120I | GGNCC | 1 cut(s) | 763 |
| BmiI | GGNNCC | 2 cut(s) | 26, 396 |
| BmrFI | CCNGG | 1 cut(s) | 1103 |
| BmsI | GCATC | 3 cut(s) | 736, 1319, 1426 |
| BpiI | GAAGAC | 2 cut(s) | 270, 291 |
| BpmI | CTGGAG | 2 cut(s) | 528, 1212 |
| Bsa29I | ATCGAT | 1 cut(s) | 1418 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1414 |
| BsaI | GGTCTC | 1 cut(s) | 1421 |
| BsaJI | CCNNGG | 3 cut(s) | 1026, 1215, 1620 |
| BsaWI | WCCGGW | 1 cut(s) | 167 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1185, 1215 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 181, 200, 1010, 1509 |
| Bse1I | ACTGG | 2 cut(s) | 1114, 1195 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1414 |
| BseBI | CCWGG | 1 cut(s) | 1103 |
| BseCI | ATCGAT | 1 cut(s) | 1418 |
| BseDI | CCNNGG | 3 cut(s) | 1026, 1215, 1620 |
| BseGI | GGATG | 5 cut(s) | 625, 748, 1183, 1405, 1633 |
| BseJI | GATNNNNATC | 1 cut(s) | 1414 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 181, 200, 1010, 1509 |
| BseMII | CTCAG | 4 cut(s) | 786, 1137, 1239, 1457 |
| BseNI | ACTGG | 2 cut(s) | 1114, 1195 |
| BseRI | GAGGAG | 5 cut(s) | 272, 473, 516, 740, 1321 |
| BseXI | GCAGC | 3 cut(s) | 63, 1231, 1397 |
| BsgI | GTGCAG | 1 cut(s) | 777 |
| Bsh1236I | CGCG | 2 cut(s) | 344, 1523 |
| BshFI | GGCC | 1 cut(s) | 764 |
| BshVI | ATCGAT | 1 cut(s) | 1418 |
| BsiHKAI | GWGCWC | 1 cut(s) | 962 |
| BsiHKCI | CYCGRG | 1 cut(s) | 80 |
| BsiSI | CCGG | 2 cut(s) | 168, 1607 |
| BslFI | GGGAC | 1 cut(s) | 1525 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 181, 200, 1010, 1509 |
| BsmAI | GTCTC | 5 cut(s) | 378, 476, 1130, 1270, 1421 |
| BsmBI | CGTCTC | 1 cut(s) | 378 |
| BsmFI | GGGAC | 1 cut(s) | 1525 |
| BsmI | GAATGC | 2 cut(s) | 115, 712 |
| BsnI | GGCC | 1 cut(s) | 764 |
| Bso31I | GGTCTC | 1 cut(s) | 1421 |
| BsoBI | CYCGRG | 1 cut(s) | 80 |
| Bsp1286I | GDGCHC | 1 cut(s) | 962 |
| Bsp19I | CCATGG | 1 cut(s) | 1215 |
| BspACI | CCGC | 4 cut(s) | 10, 557, 953, 1440 |
| BspANI | GGCC | 1 cut(s) | 764 |
| BspCNI | CTCAG | 4 cut(s) | 787, 1138, 1240, 1456 |
| BspDI | ATCGAT | 1 cut(s) | 1418 |
| BspFNI | CGCG | 2 cut(s) | 344, 1523 |
| BspHI | TCATGA | 2 cut(s) | 712, 1531 |
| BspLI | GGNNCC | 2 cut(s) | 26, 396 |
| BspMAI | CTGCAG | 1 cut(s) | 66 |
| BspPI | GGATC | 6 cut(s) | 330, 389, 402, 438, 1417, 1529 |
| BspQI | GCTCTTC | 1 cut(s) | 444 |
| BspTI | CTTAAG | 1 cut(s) | 1369 |
| BspTNI | GGTCTC | 1 cut(s) | 1421 |
| BsrBI | CCGCTC | 1 cut(s) | 1442 |
| BsrI | ACTGG | 2 cut(s) | 1114, 1195 |
| BssECI | CCNNGG | 3 cut(s) | 1026, 1215, 1620 |
| BssSI | CACGAG | 1 cut(s) | 720 |
| BssT1I | CCWWGG | 1 cut(s) | 1215 |
| Bst2BI | CACGAG | 1 cut(s) | 720 |
| Bst2UI | CCWGG | 1 cut(s) | 1103 |
| Bst4CI | ACNGT | 6 cut(s) | 635, 1027, 1141, 1174, 1279, 1342 |
| BstAFI | CTTAAG | 1 cut(s) | 1369 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 61 |
| BstC8I | GCNNGC | 2 cut(s) | 1078, 1585 |
| BstDEI | CTNAG | 4 cut(s) | 795, 1146, 1248, 1443 |
| BstDSI | CCRYGG | 2 cut(s) | 1026, 1215 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 179 |
| BstF5I | GGATG | 5 cut(s) | 625, 748, 1183, 1405, 1633 |
| BstFNI | CGCG | 2 cut(s) | 344, 1523 |
| BstHHI | GCGC | 2 cut(s) | 346, 1156 |
| BstMAI | GTCTC | 5 cut(s) | 378, 476, 1130, 1270, 1421 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 61, 716, 755 |
| BstNI | CCWGG | 1 cut(s) | 1103 |
| BstNSI | RCATGY | 1 cut(s) | 59 |
| BstSCI | CCNGG | 1 cut(s) | 1101 |
| BstSFI | CTRYAG | 1 cut(s) | 62 |
| BstUI | CGCG | 2 cut(s) | 344, 1523 |
| BstV1I | GCAGC | 3 cut(s) | 63, 1231, 1397 |
| BstV2I | GAAGAC | 2 cut(s) | 270, 291 |
| BstX2I | RGATCY | 4 cut(s) | 394, 430, 1373, 1409 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1109, 1222 |
| BstYI | RGATCY | 4 cut(s) | 394, 430, 1373, 1409 |
| Bsu15I | ATCGAT | 1 cut(s) | 1418 |
| BsuI | GTATCC | 1 cut(s) | 1291 |
| BsuRI | GGCC | 1 cut(s) | 764 |
| BsuTUI | ATCGAT | 1 cut(s) | 1418 |
| BtgI | CCRYGG | 2 cut(s) | 1026, 1215 |
| BtgZI | GCGATG | 1 cut(s) | 989 |
| BtrI | CACGTC | 1 cut(s) | 1201 |
| BtsCI | GGATG | 5 cut(s) | 625, 748, 1183, 1405, 1633 |
| BtsI | GCAGTG | 2 cut(s) | 765, 1601 |
| BtsIMutI | CAGTG | 4 cut(s) | 765, 786, 1587, 1601 |
| Cac8I | GCNNGC | 2 cut(s) | 1078, 1585 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1139, 1247 |
| CciI | TCATGA | 2 cut(s) | 712, 1531 |
| CfoI | GCGC | 2 cut(s) | 346, 1156 |
| Cfr13I | GGNCC | 1 cut(s) | 763 |
| ClaI | ATCGAT | 1 cut(s) | 1418 |
| CseI | GACGC | 2 cut(s) | 350, 1529 |
| Csp6I | GTAC | 4 cut(s) | 894, 1035, 1068, 1464 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 849, 884 |
| CviQI | GTAC | 4 cut(s) | 894, 1035, 1068, 1464 |
| DdeI | CTNAG | 4 cut(s) | 795, 1146, 1248, 1443 |
| DraI | TTTAAA | 1 cut(s) | 903 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1354 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1354 |
| Ecl136II | GAGCTC | 1 cut(s) | 960 |
| Eco130I | CCWWGG | 1 cut(s) | 1215 |
| Eco24I | GRGCYC | 1 cut(s) | 962 |
| Eco31I | GGTCTC | 1 cut(s) | 1421 |
| Eco53kI | GAGCTC | 1 cut(s) | 960 |
| Eco57I | CTGAAG | 2 cut(s) | 318, 455 |
| Eco88I | CYCGRG | 1 cut(s) | 80 |
| EcoICRI | GAGCTC | 1 cut(s) | 960 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 179 |
| EcoRI | GAATTC | 1 cut(s) | 667 |
| EcoRII | CCWGG | 1 cut(s) | 1101 |
| EcoT14I | CCWWGG | 1 cut(s) | 1215 |
| EcoT38I | GRGCYC | 1 cut(s) | 962 |
| ErhI | CCWWGG | 1 cut(s) | 1215 |
| Esp3I | CGTCTC | 1 cut(s) | 378 |
| FaqI | GGGAC | 1 cut(s) | 1525 |
| FbaI | TGATCA | 3 cut(s) | 3, 997, 1203 |
| FblI | GTMKAC | 1 cut(s) | 339 |
| Fnu4HI | GCNGC | 5 cut(s) | 77, 1245, 1386, 1440, 1647 |
| FokI | GGATG | 5 cut(s) | 632, 755, 1190, 1412, 1640 |
| FriOI | GRGCYC | 1 cut(s) | 962 |
| Fsp4HI | GCNGC | 5 cut(s) | 77, 1245, 1386, 1440, 1647 |
| FspBI | CTAG | 2 cut(s) | 753, 845 |
| GlaI | GCGC | 2 cut(s) | 345, 1155 |
| GluI | GCNGC | 5 cut(s) | 77, 1245, 1386, 1440, 1647 |
| GsuI | CTGGAG | 2 cut(s) | 528, 1212 |
| HaeIII | GGCC | 1 cut(s) | 764 |
| HapII | CCGG | 2 cut(s) | 168, 1607 |
| HgaI | GACGC | 2 cut(s) | 350, 1529 |
| HhaI | GCGC | 2 cut(s) | 346, 1156 |
| Hin6I | GCGC | 2 cut(s) | 344, 1154 |
| HinP1I | GCGC | 2 cut(s) | 344, 1154 |
| HincII | GTYRAC | 1 cut(s) | 1089 |
| HindII | GTYRAC | 1 cut(s) | 1089 |
| HpaII | CCGG | 2 cut(s) | 168, 1607 |
| HphI | GGTGA | 9 cut(s) | 61, 197, 635, 647, 991, 1042, 1075, 1499, 1555 |
| Hpy166II | GTNNAC | 2 cut(s) | 340, 1089 |
| Hpy188III | TCNNGA | 6 cut(s) | 713, 830, 1301, 1314, 1407, 1532 |
| Hpy8I | GTNNAC | 2 cut(s) | 340, 1089 |
| HpyAV | CCTTC | 5 cut(s) | 224, 263, 542, 610, 1484 |
| HpyCH4III | ACNGT | 6 cut(s) | 635, 1027, 1141, 1174, 1279, 1342 |
| HpyCH4IV | ACGT | 1 cut(s) | 1200 |
| HpyCH4V | TGCA | 4 cut(s) | 64, 310, 758, 1646 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 61, 716, 755 |
| HpyF3I | CTNAG | 4 cut(s) | 795, 1146, 1248, 1443 |
| HpySE526I | ACGT | 1 cut(s) | 1200 |
| HspAI | GCGC | 2 cut(s) | 344, 1154 |
| Ksp22I | TGATCA | 3 cut(s) | 3, 997, 1203 |
| LguI | GCTCTTC | 1 cut(s) | 444 |
| LmnI | GCTCC | 3 cut(s) | 272, 503, 1382 |
| Lsp1109I | GCAGC | 3 cut(s) | 63, 1231, 1397 |
| LweI | GCATC | 3 cut(s) | 736, 1319, 1426 |
| MaeI | CTAG | 2 cut(s) | 753, 845 |
| MaeII | ACGT | 1 cut(s) | 1200 |
| MaeIII | GTNAC | 1 cut(s) | 96 |
| MbiI | CCGCTC | 1 cut(s) | 1442 |
| MflI | RGATCY | 4 cut(s) | 394, 430, 1373, 1409 |
| MhlI | GDGCHC | 1 cut(s) | 962 |
| MluCI | AATT | 7 cut(s) | 572, 667, 730, 856, 1051, 1270, 1290 |
| MlyI | GAGTC | 4 cut(s) | 1157, 1463, 1493, 1519 |
| MseI | TTAA | 4 cut(s) | 902, 968, 1287, 1370 |
| MslI | CAYNNNNRTG | 2 cut(s) | 120, 1220 |
| MspA1I | CMGCKG | 2 cut(s) | 1244, 1388 |
| MspCI | CTTAAG | 1 cut(s) | 1369 |
| MspI | CCGG | 2 cut(s) | 168, 1607 |
| MspR9I | CCNGG | 1 cut(s) | 1103 |
| Mva1269I | GAATGC | 2 cut(s) | 115, 712 |
| MvaI | CCWGG | 1 cut(s) | 1103 |
| MvnI | CGCG | 2 cut(s) | 344, 1523 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 61, 716, 755 |
| NcoI | CCATGG | 1 cut(s) | 1215 |
| NlaIV | GGNNCC | 2 cut(s) | 26, 396 |
| NspI | RCATGY | 1 cut(s) | 59 |
| PagI | TCATGA | 2 cut(s) | 712, 1531 |
| PciSI | GCTCTTC | 1 cut(s) | 444 |
| PctI | GAATGC | 2 cut(s) | 115, 712 |
| PfeI | GAWTC | 9 cut(s) | 42, 358, 826, 1259, 1297, 1319, 1472, 1544, 1553 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 200 |
| PkrI | GCNGC | 5 cut(s) | 78, 1246, 1387, 1441, 1648 |
| PleI | GAGTC | 4 cut(s) | 1156, 1462, 1493, 1519 |
| PpsI | GAGTC | 4 cut(s) | 1156, 1462, 1493, 1519 |
| PsiI | TTATAA | 1 cut(s) | 782 |
| Psp124BI | GAGCTC | 1 cut(s) | 962 |
| Psp6I | CCWGG | 1 cut(s) | 1101 |
| PspGI | CCWGG | 1 cut(s) | 1101 |
| PspN4I | GGNNCC | 2 cut(s) | 26, 396 |
| PspPI | GGNCC | 1 cut(s) | 763 |
| PstI | CTGCAG | 1 cut(s) | 66 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1139, 1247 |
| PsuI | RGATCY | 4 cut(s) | 394, 430, 1373, 1409 |
| PvuII | CAGCTG | 2 cut(s) | 1244, 1388 |
| RsaI | GTAC | 4 cut(s) | 895, 1036, 1069, 1465 |
| RsaNI | GTAC | 4 cut(s) | 894, 1035, 1068, 1464 |
| RseI | CAYNNNNRTG | 2 cut(s) | 120, 1220 |
| SacI | GAGCTC | 1 cut(s) | 962 |
| SapI | GCTCTTC | 1 cut(s) | 444 |
| SaqAI | TTAA | 4 cut(s) | 902, 968, 1287, 1370 |
| SatI | GCNGC | 5 cut(s) | 77, 1245, 1386, 1440, 1647 |
| Sau96I | GGNCC | 1 cut(s) | 763 |
| SchI | GAGTC | 4 cut(s) | 1157, 1463, 1493, 1519 |
| ScrFI | CCNGG | 1 cut(s) | 1103 |
| SduI | GDGCHC | 1 cut(s) | 962 |
| SfaNI | GCATC | 3 cut(s) | 736, 1319, 1426 |
| SfcI | CTRYAG | 1 cut(s) | 62 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 120, 1220 |
| SmlI | CTYRAG | 1 cut(s) | 1369 |
| SmoI | CTYRAG | 1 cut(s) | 1369 |
| Sse9I | AATT | 7 cut(s) | 572, 667, 730, 856, 1051, 1270, 1290 |
| SsiI | CCGC | 4 cut(s) | 10, 557, 953, 1440 |
| SspMI | CTAG | 2 cut(s) | 753, 845 |
| SstI | GAGCTC | 1 cut(s) | 962 |
| StyD4I | CCNGG | 1 cut(s) | 1101 |
| StyI | CCWWGG | 1 cut(s) | 1215 |
| TaaI | ACNGT | 6 cut(s) | 635, 1027, 1141, 1174, 1279, 1342 |
| TaiI | ACGT | 1 cut(s) | 1203 |
| TaqI | TCGA | 1 cut(s) | 1418 |
| TasI | AATT | 7 cut(s) | 572, 667, 730, 856, 1051, 1270, 1290 |
| TatI | WGTACW | 1 cut(s) | 1067 |
| TauI | GCSGC | 1 cut(s) | 1442 |
| TfiI | GAWTC | 9 cut(s) | 42, 358, 826, 1259, 1297, 1319, 1472, 1544, 1553 |
| Tru1I | TTAA | 4 cut(s) | 902, 968, 1287, 1370 |
| Tru9I | TTAA | 4 cut(s) | 902, 968, 1287, 1370 |
| TscAI | CASTG | 4 cut(s) | 765, 793, 1594, 1608 |
| TseI | GCWGC | 4 cut(s) | 76, 1244, 1385, 1646 |
| TspGWI | ACGGA | 1 cut(s) | 1395 |
| TspRI | CASTG | 4 cut(s) | 765, 793, 1594, 1608 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 200 |
| Vha464I | CTTAAG | 1 cut(s) | 1369 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 179 |
| XapI | RAATTY | 3 cut(s) | 572, 667, 1270 |
| XceI | RCATGY | 1 cut(s) | 59 |
| XmiI | GTMKAC | 1 cut(s) | 339 |
| XspI | CTAG | 2 cut(s) | 753, 845 |