Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0001451

Physical Location & Seq

Genomic Coordinates Reverse (-)

29373093 .. 29375712

Gene Structure 2620 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1165400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1371 bp

ATGGCGAAGACGGGCGTTTTCGACTCTGATCCGACGGCGGTAGCCAAGGCGGCGGAGTTGAAGAAGGAGCTGCAGAGGCTGGTGAAAGCAATTGTCGACGACGAGGATTTCACCACCCAGACAATCGATCAGGCCAGAGACACACTCTCTGCTCTGAAAGAATTGAAGCTCAAGAAAAGATCGCTCTCTCTCAAGCTCAAGGATGTTCTCTCCTGCCCCGAAGAGTTCCGGTGCCCTCTTTCGAAAGAGCTGATGAGAGACCCTGTGATTGTCTCCACAGGCGAGACATATGATAGGGCATTCATCGAAAAAGGACTGAAAGCGGGTAACAGGATATGCCCTCGAACGCAACAAGTGCTCACACACACTGTCCTTACTCCGAATCACTTGGTTCGTGAAATGATATCGCAATGGTGTAAGAATCGAGGGATTGAATTGTCGGATCCCGTTCTCCATGTCAATGAGGATGGTATAACAGAATCTGATCGAGACCATTTTCTCTCTTTGCTCCGGAAGATGTCTTCGACATTCCCTGAGCAGAAAGAAGCTGCGAAGGAGCTTCGGATGTTGACAAAGAGGATGCCTTCTTTCCGGGCGCTTTTTAGCGAGTCTATACATGCCATTCCTCAATTGCTCAGTCCTCTATCTGAAGGCAAGTTTGAAGATGGTATTGATCCGGAACTCCAAGAAGATATTATCACAACGCTATTGAATTTGTCAATCCACGACAACAACAAGAAGCTTGTCGCTGAAACTTTAATGGTAATTCCTTTACTTATGGAAGCATTGCAATCGGGGACCATTCAAACAAGGAGCAATGCAGCTGCAGCTCTTTTCACTTTGTCAGCTCTTGATTCCAACAAGGCACTTATTGGAAAATCAGGCGCCCTAAAGCCACTCATTGCCCTCCTAGAGGAGGGACATCCATTAGCTATGAAAGATGTCGCCTCTGCAATTTTCAATCTATGCATTACTCATGAGAACAAGGCAAGAGCTGTGAGAGACGGGGCAGTGAGGACGATTCTGAAAAAGATAGCGAATGGTATGCATGTTGATGAGTTGTTGGCCATCCTTGCAATGATCTCAAGCCATCCTAAGGCTGTGGAGGAAATGGGAGAGCTTGGAGGTGTTTCTTGCTTGCTCGGTGTTATCAGGGAGACCAATTGCTCACGCAACAAGGAGAATTGCATTGCAGTCCTTCACACAATCTGTTTGAATGACCGAACCAAGTGGAAGGAAATTAGGGAAGAAGAGAACGCTTATGGAACGATATCTGAGCTTGCAAATAATGGAACTTCAAGGGCTAAGAGGAAAGCTAGTGGCATTCTTGATAGACTGAACAGAGCTGTAAATCTCACACATACTGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0032870 GO:0033612 GO:0033993 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050896 GO:0051716 GO:0070647 GO:0070696 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

457

Amino Acids

50.48

Weight (kDa)

7.61

Isoelectric Point (pI)

38.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U-box	PF04564	73 - 142	1.3e-20	U-box domain
ARM_PUB	PF25598	171 - 343	4e-06	Plant U-box protein ARM repeat region
ARM_ARMC5	PF24768	236 - 405	6.7e-06	ARMC5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001451)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07360 AT3G07360 AT3G07360 AT3G07360 AT3G07360 AT3G07360 AT3G07360 AT3G07360 AT3G07360 AT3G07360
fragaria_vesca	FvH4_2g18070 FvH4_6g01250
malus_domestica	MD04G1235600.v1.1 MD05G1165400.v1.1 MD10G1154600.v1.1 MD12G1253300.v1.1
prunus_persica	Prupe.6G355500_v2.0.a1 Prupe.6G355500_v2.0.a1 Prupe.6G355500_v2.0.a1 Prupe.6G355500_v2.0.a1 Prupe.6G355500_v2.0.a1 Prupe.8G193500_v2.0.a1 Prupe.8G193500_v2.0.a1 Prupe.8G193500_v2.0.a1 Prupe.8G193500_v2.0.a1 Prupe.8G193500_v2.0.a1
pyrus_communis	pycom04g20910 pycom05g15400 pycom10g09710 pycom10g13370 pycom12g23240
rosa_chinensis	RchiOBHm_Chr3g0448811 RchiOBHm_Chr6g0283461
rosa_laevigata	RLG00000012824 RLG00000025873
rosa_multiflora	Rmu_sc0003116.1_g000024 Rmu_sc0004959.1_g000016
rosa_roxburghii	Rroxscaffold_6G00427030 Rroxscaffold_7G00185520
rosa_rugosa	Rorug02G0616500.1 Rorug02G0616600 Rorug06G0154400
rosa_samantha	Rh3AG014900 Rh3BG014700 Rh3CG013600 Rh3DG015200 Rh6AG266700 Rh6BG269200 Rh6CG269100 Rh6DG262500
rosa_wichuraiana	Rw3G001100 Rw6G023090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	231, 884
AccI	GTMKAC	1 cut(s)	96
AccIII	TCCGGA	2 cut(s)	510, 676
AciI	CCGC	4 cut(s)	38, 50, 53, 323
AclWI	GGATC	4 cut(s)	23, 437, 450, 668
AcoI	YGGCCR	1 cut(s)	1065
AcsI	RAATTY	1 cut(s)	712
AcuI	CTGAAG	1 cut(s)	669
AcyI	GRCGYC	1 cut(s)	885
AfiI	CCNNNNNNNGG	3 cut(s)	913, 916, 1096
AgsI	TTSAA	9 cut(s)	61, 166, 434, 662, 712, 806, 961, 1216, 1299
Alw21I	GWGCWC	1 cut(s)	360
Alw26I	GTCTC	7 cut(s)	132, 252, 277, 278, 483, 996, 1151
AlwI	GGATC	4 cut(s)	23, 437, 450, 668
AlwNI	CAGNNNCTG	2 cut(s)	79, 482
Aor13HI	TCCGGA	2 cut(s)	510, 676
AoxI	GGCC	2 cut(s)	132, 1065
ApeKI	GCWGC	5 cut(s)	70, 548, 821, 824, 827
ApoI	RAATTY	1 cut(s)	712
AspLEI	GCGC	2 cut(s)	598, 887
AspS9I	GGNCC	1 cut(s)	798
AsuC2I	CCSGG	1 cut(s)	593
AsuHPI	GGTGA	2 cut(s)	94, 103
AsuII	TTCGAA	1 cut(s)	242
AvaII	GGWCC	1 cut(s)	798
AxyI	CCTNAGG	1 cut(s)	1095
BaeGI	GKGCMC	1 cut(s)	236
BalI	TGGCCA	1 cut(s)	1067
BamHI	GGATCC	1 cut(s)	442
BanI	GGYRCC	2 cut(s)	231, 884
BbsI	GAAGAC	2 cut(s)	14, 513
Bbv12I	GWGCWC	1 cut(s)	360
BbvI	GCAGC	5 cut(s)	57, 535, 811, 833, 839
BccI	CCATC	4 cut(s)	461, 659, 1076, 1098
BceAI	ACGGC	1 cut(s)	51
BcgI	CGANNNNNNTGC	4 cut(s)	774, 808, 1027, 1061
BcnI	CCSGG	1 cut(s)	593
BcoDI	GTCTC	7 cut(s)	132, 252, 277, 278, 483, 996, 1151
BfaI	CTAG	2 cut(s)	911, 1317
BfmI	CTRYAG	2 cut(s)	71, 825
BfoI	RGCGCY	2 cut(s)	599, 888
BglI	GCCNNNNNGGC	1 cut(s)	50
BisI	GCNGC	6 cut(s)	51, 71, 549, 822, 825, 828
BlsI	GCNGC	6 cut(s)	52, 72, 550, 823, 826, 829
Bme1390I	CCNGG	1 cut(s)	593
Bme18I	GGWCC	1 cut(s)	798
BmgT120I	GGNCC	1 cut(s)	798
BmiI	GGNNCC	4 cut(s)	233, 444, 799, 886
BmrFI	CCNGG	1 cut(s)	593
BmsI	GCATC	1 cut(s)	570
BpiI	GAAGAC	2 cut(s)	14, 513
BplI	GAGNNNNNCTC	2 cut(s)	129, 161
Bpu10I	CCTNAGC	1 cut(s)	534
Bpu14I	TTCGAA	1 cut(s)	242
BpuEI	CTTGAG	4 cut(s)	155, 176, 182, 1069
BpuMI	CCSGG	1 cut(s)	593
Bsa29I	ATCGAT	1 cut(s)	126
BsaHI	GRCGYC	1 cut(s)	885
BsaI	GGTCTC	3 cut(s)	252, 483, 1151
BsaJI	CCNNGG	1 cut(s)	45
BsaWI	WCCGGW	3 cut(s)	228, 510, 676
Bsc4I	CCNNNNNNNGG	3 cut(s)	913, 916, 1096
Bse21I	CCTNAGG	1 cut(s)	1095
Bse3DI	GCAATG	6 cut(s)	416, 785, 823, 900, 1083, 1188
BseAI	TCCGGA	2 cut(s)	510, 676
BseCI	ATCGAT	1 cut(s)	126
BseDI	CCNNGG	1 cut(s)	45
BseGI	GGATG	7 cut(s)	208, 472, 570, 585, 922, 1068, 1090
BseLI	CCNNNNNNNGG	3 cut(s)	913, 916, 1096
BseMI	GCAATG	6 cut(s)	416, 785, 823, 900, 1083, 1188
BseMII	CTCAG	3 cut(s)	525, 649, 1266
BseRI	GAGGAG	1 cut(s)	929
BseSI	GKGCMC	1 cut(s)	236
BseXI	GCAGC	5 cut(s)	57, 535, 811, 833, 839
BshFI	GGCC	2 cut(s)	134, 1067
BshNI	GGYRCC	2 cut(s)	231, 884
BshVI	ATCGAT	1 cut(s)	126
BsiHKAI	GWGCWC	1 cut(s)	360
BsiSI	CCGG	4 cut(s)	229, 511, 592, 677
BslFI	GGGAC	2 cut(s)	811, 933
BslI	CCNNNNNNNGG	3 cut(s)	913, 916, 1096
BsmAI	GTCTC	7 cut(s)	132, 252, 277, 278, 483, 996, 1151
BsmBI	CGTCTC	1 cut(s)	996
BsmFI	GGGAC	2 cut(s)	811, 933
BsmI	GAATGC	2 cut(s)	299, 1323
BsnI	GGCC	2 cut(s)	134, 1067
Bso31I	GGTCTC	3 cut(s)	252, 483, 1151
Bsp119I	TTCGAA	1 cut(s)	242
Bsp1286I	GDGCHC	2 cut(s)	236, 360
Bsp13I	TCCGGA	2 cut(s)	510, 676
Bsp143I	GATC	7 cut(s)	28, 127, 179, 442, 484, 673, 1080
BspACI	CCGC	4 cut(s)	38, 50, 53, 323
BspANI	GGCC	2 cut(s)	134, 1067
BspCNI	CTCAG	3 cut(s)	526, 648, 1267
BspDI	ATCGAT	1 cut(s)	126
BspEI	TCCGGA	2 cut(s)	510, 676
BspHI	TCATGA	1 cut(s)	976
BspLI	GGNNCC	4 cut(s)	233, 444, 799, 886
BspMAI	CTGCAG	2 cut(s)	75, 829
BspPI	GGATC	4 cut(s)	23, 437, 450, 668
BspT104I	TTCGAA	1 cut(s)	242
BspT107I	GGYRCC	2 cut(s)	231, 884
BspTNI	GGTCTC	3 cut(s)	252, 483, 1151
BsrDI	GCAATG	6 cut(s)	416, 785, 823, 900, 1083, 1188
BssECI	CCNNGG	1 cut(s)	45
BssMI	GATC	7 cut(s)	28, 127, 179, 442, 484, 673, 1080
BssNI	GRCGYC	1 cut(s)	885
BssT1I	CCWWGG	1 cut(s)	45
Bst4CI	ACNGT	1 cut(s)	370
Bst6I	CTCTTC	2 cut(s)	216, 1245
BstACI	GRCGYC	1 cut(s)	885
BstAPI	GCANNNNNTGC	1 cut(s)	355
BstBI	TTCGAA	1 cut(s)	242
BstC8I	GCNNGC	2 cut(s)	1139, 1281
BstDEI	CTNAG	5 cut(s)	534, 635, 1095, 1275, 1305
BstENI	CCTNNNNNAGG	2 cut(s)	911, 914
BstF5I	GGATG	7 cut(s)	208, 472, 570, 585, 922, 1068, 1090
BstH2I	RGCGCY	2 cut(s)	599, 888
BstHHI	GCGC	2 cut(s)	598, 887
BstKTI	GATC	7 cut(s)	31, 130, 182, 445, 487, 676, 1083
BstMAI	GTCTC	7 cut(s)	132, 252, 277, 278, 483, 996, 1151
BstMBI	GATC	7 cut(s)	28, 127, 179, 442, 484, 673, 1080
BstMWI	GCNNNNNNNGC	5 cut(s)	50, 76, 355, 827, 1073
BstNSI	RCATGY	2 cut(s)	620, 1052
BstSCI	CCNGG	1 cut(s)	591
BstSFI	CTRYAG	2 cut(s)	71, 825
BstSLI	GKGCMC	1 cut(s)	236
BstV1I	GCAGC	5 cut(s)	57, 535, 811, 833, 839
BstV2I	GAAGAC	2 cut(s)	14, 513
BstX2I	RGATCY	1 cut(s)	442
BstYI	RGATCY	1 cut(s)	442
Bsu15I	ATCGAT	1 cut(s)	126
Bsu36I	CCTNAGG	1 cut(s)	1095
BsuRI	GGCC	2 cut(s)	134, 1067
BsuTUI	ATCGAT	1 cut(s)	126
BtsCI	GGATG	7 cut(s)	208, 472, 570, 585, 922, 1068, 1090
BtsI	GCAGTG	1 cut(s)	1017
BtsIMutI	CAGTG	2 cut(s)	366, 1017
Cac8I	GCNNGC	2 cut(s)	1139, 1281
CaiI	CAGNNNCTG	2 cut(s)	79, 482
CciI	TCATGA	1 cut(s)	976
CfoI	GCGC	2 cut(s)	598, 887
Cfr13I	GGNCC	1 cut(s)	798
ClaI	ATCGAT	1 cut(s)	126
CviAII	CATG	5 cut(s)	455, 617, 977, 1049, 1368
DdeI	CTNAG	5 cut(s)	534, 635, 1095, 1275, 1305
DinI	GGCGCC	1 cut(s)	886
DpnI	GATC	7 cut(s)	30, 129, 181, 444, 486, 675, 1082
DpnII	GATC	7 cut(s)	28, 127, 179, 442, 484, 673, 1080
EaeI	YGGCCR	1 cut(s)	1065
Eam1104I	CTCTTC	2 cut(s)	216, 1245
EarI	CTCTTC	2 cut(s)	216, 1245
EciI	GGCGGA	1 cut(s)	68
Eco130I	CCWWGG	1 cut(s)	45
Eco31I	GGTCTC	3 cut(s)	252, 483, 1151
Eco32I	GATATC	2 cut(s)	405, 1272
Eco47I	GGWCC	1 cut(s)	798
Eco57I	CTGAAG	1 cut(s)	669
Eco81I	CCTNAGG	1 cut(s)	1095
EcoNI	CCTNNNNNAGG	2 cut(s)	911, 914
EcoRV	GATATC	2 cut(s)	405, 1272
EcoT14I	CCWWGG	1 cut(s)	45
EcoT22I	ATGCAT	2 cut(s)	971, 1050
EgeI	GGCGCC	1 cut(s)	886
EheI	GGCGCC	1 cut(s)	886
ErhI	CCWWGG	1 cut(s)	45
Esp3I	CGTCTC	1 cut(s)	996
FaeI	CATG	5 cut(s)	458, 620, 980, 1052, 1371
FaqI	GGGAC	2 cut(s)	811, 933
FatI	CATG	5 cut(s)	454, 616, 976, 1048, 1367
FauI	CCCGC	1 cut(s)	316
FauNDI	CATATG	1 cut(s)	289
FblI	GTMKAC	1 cut(s)	96
Fnu4HI	GCNGC	6 cut(s)	51, 71, 549, 822, 825, 828
FokI	GGATG	7 cut(s)	215, 479, 577, 592, 909, 1055, 1077
Fsp4HI	GCNGC	6 cut(s)	51, 71, 549, 822, 825, 828
FspBI	CTAG	2 cut(s)	911, 1317
GlaI	GCGC	2 cut(s)	597, 886
GluI	GCNGC	6 cut(s)	51, 71, 549, 822, 825, 828
HaeII	RGCGCY	2 cut(s)	599, 888
HaeIII	GGCC	2 cut(s)	134, 1067
HapII	CCGG	4 cut(s)	229, 511, 592, 677
HhaI	GCGC	2 cut(s)	598, 887
Hin1I	GRCGYC	1 cut(s)	885
Hin1II	CATG	5 cut(s)	458, 620, 980, 1052, 1371
Hin6I	GCGC	2 cut(s)	596, 885
HinP1I	GCGC	2 cut(s)	596, 885
HincII	GTYRAC	2 cut(s)	97, 570
HindII	GTYRAC	2 cut(s)	97, 570
HindIII	AAGCTT	1 cut(s)	740
HinfI	GANTC	7 cut(s)	23, 382, 421, 479, 608, 854, 1021
HpaII	CCGG	4 cut(s)	229, 511, 592, 677
HphI	GGTGA	2 cut(s)	94, 103
Hpy166II	GTNNAC	2 cut(s)	97, 570
Hpy188III	TCNNGA	8 cut(s)	172, 395, 488, 511, 677, 851, 977, 1328
Hpy8I	GTNNAC	2 cut(s)	97, 570
Hpy99I	CGWCG	3 cut(s)	37, 101, 104
HpyAV	CCTTC	6 cut(s)	58, 547, 594, 644, 1208, 1228
HpyCH4III	ACNGT	1 cut(s)	370
HpyF10VI	GCNNNNNNNGC	5 cut(s)	50, 76, 355, 827, 1073
HpyF3I	CTNAG	5 cut(s)	534, 635, 1095, 1275, 1305
Hsp92I	GRCGYC	1 cut(s)	885
Hsp92II	CATG	5 cut(s)	458, 620, 980, 1052, 1371
HspAI	GCGC	2 cut(s)	596, 885
KasI	GGCGCC	1 cut(s)	884
Kpn2I	TCCGGA	2 cut(s)	510, 676
Kzo9I	GATC	7 cut(s)	28, 127, 179, 442, 484, 673, 1080
LmnI	GCTCC	4 cut(s)	67, 513, 556, 813
Lsp1109I	GCAGC	5 cut(s)	57, 535, 811, 833, 839
LweI	GCATC	1 cut(s)	570
MaeI	CTAG	2 cut(s)	911, 1317
MaeIII	GTNAC	1 cut(s)	326
MalI	GATC	7 cut(s)	30, 129, 181, 444, 486, 675, 1082
MboI	GATC	7 cut(s)	28, 127, 179, 442, 484, 673, 1080
MboII	GAAGA	9 cut(s)	19, 73, 233, 513, 526, 674, 701, 1259, 1262
MfeI	CAATTG	3 cut(s)	90, 629, 1162
MflI	RGATCY	1 cut(s)	442
MhlI	GDGCHC	2 cut(s)	236, 360
MlsI	TGGCCA	1 cut(s)	1067
MluNI	TGGCCA	1 cut(s)	1067
Mly113I	GGCGCC	1 cut(s)	885
MlyI	GAGTC	2 cut(s)	17, 617
MmeI	TCCRAC	3 cut(s)	56, 420, 882
Mox20I	TGGCCA	1 cut(s)	1067
Mph1103I	ATGCAT	2 cut(s)	971, 1050
MroI	TCCGGA	2 cut(s)	510, 676
MscI	TGGCCA	1 cut(s)	1067
MseI	TTAA	1 cut(s)	758
MslI	CAYNNNNRTG	2 cut(s)	459, 1053
Msp20I	TGGCCA	1 cut(s)	1067
MspA1I	CMGCKG	1 cut(s)	824
MspI	CCGG	4 cut(s)	229, 511, 592, 677
MspR9I	CCNGG	1 cut(s)	593
MunI	CAATTG	3 cut(s)	90, 629, 1162
Mva1269I	GAATGC	2 cut(s)	299, 1323
MwoI	GCNNNNNNNGC	5 cut(s)	50, 76, 355, 827, 1073
NarI	GGCGCC	1 cut(s)	885
NciI	CCSGG	1 cut(s)	593
NdeI	CATATG	1 cut(s)	289
NdeII	GATC	7 cut(s)	28, 127, 179, 442, 484, 673, 1080
NlaIII	CATG	5 cut(s)	458, 620, 980, 1052, 1371
NlaIV	GGNNCC	4 cut(s)	233, 444, 799, 886
NsiI	ATGCAT	2 cut(s)	971, 1050
NspI	RCATGY	2 cut(s)	620, 1052
NspV	TTCGAA	1 cut(s)	242
PagI	TCATGA	1 cut(s)	976
PctI	GAATGC	2 cut(s)	299, 1323
PfeI	GAWTC	5 cut(s)	382, 421, 479, 854, 1021
PkrI	GCNGC	6 cut(s)	52, 72, 550, 823, 826, 829
PleI	GAGTC	2 cut(s)	17, 616
PluTI	GGCGCC	1 cut(s)	888
PpsI	GAGTC	2 cut(s)	17, 616
PspN4I	GGNNCC	4 cut(s)	233, 444, 799, 886
PspPI	GGNCC	1 cut(s)	798
PstI	CTGCAG	2 cut(s)	75, 829
PstNI	CAGNNNCTG	2 cut(s)	79, 482
PsuI	RGATCY	1 cut(s)	442
PvuII	CAGCTG	1 cut(s)	824
RseI	CAYNNNNRTG	2 cut(s)	459, 1053
SalI	GTCGAC	1 cut(s)	95
SaqAI	TTAA	1 cut(s)	758
SatI	GCNGC	6 cut(s)	51, 71, 549, 822, 825, 828
Sau3AI	GATC	7 cut(s)	28, 127, 179, 442, 484, 673, 1080
Sau96I	GGNCC	1 cut(s)	798
SchI	GAGTC	2 cut(s)	17, 617
ScrFI	CCNGG	1 cut(s)	593
SduI	GDGCHC	2 cut(s)	236, 360
SfaNI	GCATC	1 cut(s)	570
SfcI	CTRYAG	2 cut(s)	71, 825
SfoI	GGCGCC	1 cut(s)	886
SfuI	TTCGAA	1 cut(s)	242
SinI	GGWCC	1 cut(s)	798
SmiMI	CAYNNNNRTG	2 cut(s)	459, 1053
SmlI	CTYRAG	4 cut(s)	170, 191, 197, 1084
SmoI	CTYRAG	4 cut(s)	170, 191, 197, 1084
SsiI	CCGC	4 cut(s)	38, 50, 53, 323
SspDI	GGCGCC	1 cut(s)	884
SspMI	CTAG	2 cut(s)	911, 1317
StyD4I	CCNGG	1 cut(s)	591
StyI	CCWWGG	1 cut(s)	45
TaaI	ACNGT	1 cut(s)	370
TaqI	TCGA	9 cut(s)	21, 96, 126, 242, 306, 343, 424, 487, 524
TaqII	GACCGA	1 cut(s)	1236
TauI	GCSGC	1 cut(s)	53
TfiI	GAWTC	5 cut(s)	382, 421, 479, 854, 1021
Tru1I	TTAA	1 cut(s)	758
Tru9I	TTAA	1 cut(s)	758
TscAI	CASTG	2 cut(s)	373, 1017
TseI	GCWGC	5 cut(s)	70, 548, 821, 824, 827
TspDTI	ATGAA	2 cut(s)	292, 950
TspRI	CASTG	2 cut(s)	373, 1017
VpaK11BI	GGWCC	1 cut(s)	798
XagI	CCTNNNNNAGG	2 cut(s)	911, 914
XapI	RAATTY	1 cut(s)	712
XceI	RCATGY	2 cut(s)	620, 1052
XmiI	GTMKAC	1 cut(s)	96
XspI	CTAG	2 cut(s)	911, 1317
Zsp2I	ATGCAT	2 cut(s)	971, 1050

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.