RING-type E3 ubiquitin transferase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1468 |
| AccB1I | GGYRCC | 1 cut(s) | 1052 |
| AciI | CCGC | 3 cut(s) | 236, 491, 1335 |
| AclWI | GGATC | 3 cut(s) | 23, 605, 618 |
| AcoI | YGGCCR | 3 cut(s) | 3, 42, 1233 |
| AcsI | RAATTY | 1 cut(s) | 1407 |
| AcuI | CTGAAG | 4 cut(s) | 212, 240, 837, 1214 |
| AfaI | GTAC | 3 cut(s) | 441, 525, 1430 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1084, 1264 |
| AflIII | ACRYGT | 1 cut(s) | 1425 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 152, 184 |
| Alw21I | GWGCWC | 1 cut(s) | 419 |
| Alw26I | GTCTC | 4 cut(s) | 192, 252, 651, 1319 |
| AlwI | GGATC | 3 cut(s) | 23, 605, 618 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 79 |
| AoxI | GGCC | 4 cut(s) | 3, 42, 132, 1233 |
| ApeKI | GCWGC | 5 cut(s) | 70, 716, 989, 992, 995 |
| ApoI | RAATTY | 1 cut(s) | 1407 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 225 |
| AsuC2I | CCSGG | 2 cut(s) | 761, 845 |
| AsuHPI | GGTGA | 4 cut(s) | 94, 785, 833, 1132 |
| BaeGI | GKGCMC | 2 cut(s) | 766, 1057 |
| BalI | TGGCCA | 3 cut(s) | 5, 44, 1235 |
| BamHI | GGATCC | 1 cut(s) | 610 |
| BanI | GGYRCC | 1 cut(s) | 1052 |
| BanII | GRGCYC | 1 cut(s) | 419 |
| BbsI | GAAGAC | 2 cut(s) | 458, 681 |
| Bbv12I | GWGCWC | 1 cut(s) | 419 |
| BbvI | GCAGC | 5 cut(s) | 57, 703, 1001, 1004, 1007 |
| BccI | CCATC | 6 cut(s) | 629, 797, 827, 1166, 1244, 1266 |
| BceAI | ACGGC | 1 cut(s) | 1280 |
| BclI | TGATCA | 1 cut(s) | 864 |
| BcnI | CCSGG | 2 cut(s) | 761, 845 |
| BcoDI | GTCTC | 4 cut(s) | 192, 252, 651, 1319 |
| BfaI | CTAG | 2 cut(s) | 1079, 1485 |
| BfmI | CTRYAG | 2 cut(s) | 71, 276 |
| BglII | AGATCT | 1 cut(s) | 346 |
| BisI | GCNGC | 5 cut(s) | 71, 717, 990, 993, 996 |
| BlsI | GCNGC | 5 cut(s) | 72, 718, 991, 994, 997 |
| BmcAI | AGTACT | 1 cut(s) | 525 |
| Bme1390I | CCNGG | 2 cut(s) | 761, 845 |
| BmiI | GGNNCC | 4 cut(s) | 612, 967, 1054, 1294 |
| BmrFI | CCNGG | 2 cut(s) | 761, 845 |
| BmsI | GCATC | 3 cut(s) | 738, 1099, 1146 |
| BpiI | GAAGAC | 2 cut(s) | 458, 681 |
| BpmI | CTGGAG | 1 cut(s) | 662 |
| Bpu10I | CCTNAGC | 1 cut(s) | 702 |
| BpuEI | CTTGAG | 2 cut(s) | 140, 1237 |
| BpuMI | CCSGG | 2 cut(s) | 761, 845 |
| Bsa29I | ATCGAT | 1 cut(s) | 126 |
| BsaAI | YACGTR | 2 cut(s) | 443, 1428 |
| BsaBI | GATNNNNATC | 1 cut(s) | 27 |
| BsaI | GGTCTC | 3 cut(s) | 252, 651, 1319 |
| BsaJI | CCNNGG | 2 cut(s) | 243, 1263 |
| BsaWI | WCCGGW | 1 cut(s) | 1049 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 716, 746 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1084, 1264 |
| Bse1I | ACTGG | 1 cut(s) | 16 |
| Bse3DI | GCAATG | 5 cut(s) | 584, 953, 991, 1251, 1356 |
| Bse8I | GATNNNNATC | 1 cut(s) | 27 |
| BseCI | ATCGAT | 1 cut(s) | 126 |
| BseDI | CCNNGG | 2 cut(s) | 243, 1263 |
| BseGI | GGATG | 7 cut(s) | 471, 640, 753, 789, 1090, 1236, 1258 |
| BseJI | GATNNNNATC | 1 cut(s) | 27 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1084, 1264 |
| BseMI | GCAATG | 5 cut(s) | 584, 953, 991, 1251, 1356 |
| BseMII | CTCAG | 6 cut(s) | 314, 411, 414, 693, 817, 1434 |
| BseNI | ACTGG | 1 cut(s) | 16 |
| BseSI | GKGCMC | 2 cut(s) | 766, 1057 |
| BseXI | GCAGC | 5 cut(s) | 57, 703, 1001, 1004, 1007 |
| Bsh1285I | CGRYCG | 2 cut(s) | 734, 1390 |
| BshFI | GGCC | 4 cut(s) | 5, 44, 134, 1235 |
| BshNI | GGYRCC | 1 cut(s) | 1052 |
| BshVI | ATCGAT | 1 cut(s) | 126 |
| BsiEI | CGRYCG | 2 cut(s) | 734, 1390 |
| BsiHKAI | GWGCWC | 1 cut(s) | 419 |
| BsiSI | CCGG | 4 cut(s) | 32, 760, 845, 1050 |
| BsiWI | CGTACG | 1 cut(s) | 1428 |
| BslFI | GGGAC | 1 cut(s) | 1474 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1084, 1264 |
| BsmAI | GTCTC | 4 cut(s) | 192, 252, 651, 1319 |
| BsmFI | GGGAC | 1 cut(s) | 1474 |
| BsmI | GAATGC | 1 cut(s) | 1491 |
| BsnI | GGCC | 4 cut(s) | 5, 44, 134, 1235 |
| Bso31I | GGTCTC | 3 cut(s) | 252, 651, 1319 |
| Bsp1286I | GDGCHC | 3 cut(s) | 419, 766, 1057 |
| Bsp143I | GATC | 7 cut(s) | 28, 127, 179, 346, 610, 864, 1387 |
| BspACI | CCGC | 3 cut(s) | 236, 491, 1335 |
| BspANI | GGCC | 4 cut(s) | 5, 44, 134, 1235 |
| BspCNI | CTCAG | 6 cut(s) | 315, 412, 413, 694, 816, 1435 |
| BspDI | ATCGAT | 1 cut(s) | 126 |
| BspLI | GGNNCC | 4 cut(s) | 612, 967, 1054, 1294 |
| BspMAI | CTGCAG | 1 cut(s) | 75 |
| BspPI | GGATC | 3 cut(s) | 23, 605, 618 |
| BspT107I | GGYRCC | 1 cut(s) | 1052 |
| BspTNI | GGTCTC | 3 cut(s) | 252, 651, 1319 |
| BsrDI | GCAATG | 5 cut(s) | 584, 953, 991, 1251, 1356 |
| BsrI | ACTGG | 1 cut(s) | 16 |
| BssECI | CCNNGG | 2 cut(s) | 243, 1263 |
| BssMI | GATC | 7 cut(s) | 28, 127, 179, 346, 610, 864, 1387 |
| BssT1I | CCWWGG | 2 cut(s) | 243, 1263 |
| Bst4CI | ACNGT | 2 cut(s) | 1211, 1516 |
| Bst6I | CTCTTC | 2 cut(s) | 216, 1413 |
| BstBAI | YACGTR | 2 cut(s) | 443, 1428 |
| BstC8I | GCNNGC | 3 cut(s) | 493, 1307, 1449 |
| BstDEI | CTNAG | 8 cut(s) | 323, 350, 400, 420, 702, 803, 1443, 1473 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1082 |
| BstF5I | GGATG | 7 cut(s) | 471, 640, 753, 789, 1090, 1236, 1258 |
| BstKTI | GATC | 7 cut(s) | 31, 130, 182, 349, 613, 867, 1390 |
| BstMAI | GTCTC | 4 cut(s) | 192, 252, 651, 1319 |
| BstMBI | GATC | 7 cut(s) | 28, 127, 179, 346, 610, 864, 1387 |
| BstMCI | CGRYCG | 2 cut(s) | 734, 1390 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 41, 76, 995, 1241 |
| BstNSI | RCATGY | 3 cut(s) | 788, 914, 1220 |
| BstSCI | CCNGG | 2 cut(s) | 759, 843 |
| BstSFI | CTRYAG | 2 cut(s) | 71, 276 |
| BstSLI | GKGCMC | 2 cut(s) | 766, 1057 |
| BstSNI | TACGTA | 1 cut(s) | 443 |
| BstV1I | GCAGC | 5 cut(s) | 57, 703, 1001, 1004, 1007 |
| BstV2I | GAAGAC | 2 cut(s) | 458, 681 |
| BstX2I | RGATCY | 2 cut(s) | 346, 610 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 556, 1270 |
| BstYI | RGATCY | 2 cut(s) | 346, 610 |
| Bsu15I | ATCGAT | 1 cut(s) | 126 |
| BsuRI | GGCC | 4 cut(s) | 5, 44, 134, 1235 |
| BsuTUI | ATCGAT | 1 cut(s) | 126 |
| BtgZI | GCGATG | 1 cut(s) | 1054 |
| BtsCI | GGATG | 7 cut(s) | 471, 640, 753, 789, 1090, 1236, 1258 |
| BtsI | GCAGTG | 1 cut(s) | 1185 |
| BtsIMutI | CAGTG | 1 cut(s) | 1185 |
| Cac8I | GCNNGC | 3 cut(s) | 493, 1307, 1449 |
| CaiI | CAGNNNCTG | 1 cut(s) | 79 |
| ClaI | ATCGAT | 1 cut(s) | 126 |
| CseI | GACGC | 1 cut(s) | 1347 |
| Csp6I | GTAC | 3 cut(s) | 440, 524, 1429 |
| CviAII | CATG | 6 cut(s) | 785, 893, 911, 1145, 1217, 1536 |
| CviQI | GTAC | 3 cut(s) | 440, 524, 1429 |
| DdeI | CTNAG | 8 cut(s) | 323, 350, 400, 420, 702, 803, 1443, 1473 |
| DpnI | GATC | 7 cut(s) | 30, 129, 181, 348, 612, 866, 1389 |
| DpnII | GATC | 7 cut(s) | 28, 127, 179, 346, 610, 864, 1387 |
| DraI | TTTAAA | 1 cut(s) | 1383 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1468 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1468 |
| EaeI | YGGCCR | 3 cut(s) | 3, 42, 1233 |
| Eam1104I | CTCTTC | 2 cut(s) | 216, 1413 |
| EarI | CTCTTC | 2 cut(s) | 216, 1413 |
| Ecl136II | GAGCTC | 1 cut(s) | 417 |
| Eco105I | TACGTA | 1 cut(s) | 443 |
| Eco130I | CCWWGG | 2 cut(s) | 243, 1263 |
| Eco24I | GRGCYC | 1 cut(s) | 419 |
| Eco31I | GGTCTC | 3 cut(s) | 252, 651, 1319 |
| Eco32I | GATATC | 1 cut(s) | 573 |
| Eco53kI | GAGCTC | 1 cut(s) | 417 |
| Eco57I | CTGAAG | 4 cut(s) | 212, 240, 837, 1214 |
| EcoICRI | GAGCTC | 1 cut(s) | 417 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1082 |
| EcoRV | GATATC | 1 cut(s) | 573 |
| EcoT14I | CCWWGG | 2 cut(s) | 243, 1263 |
| EcoT22I | ATGCAT | 3 cut(s) | 366, 1139, 1218 |
| EcoT38I | GRGCYC | 1 cut(s) | 419 |
| ErhI | CCWWGG | 2 cut(s) | 243, 1263 |
| FaeI | CATG | 6 cut(s) | 788, 896, 914, 1148, 1220, 1539 |
| FaqI | GGGAC | 1 cut(s) | 1474 |
| FatI | CATG | 6 cut(s) | 784, 892, 910, 1144, 1216, 1535 |
| FauI | CCCGC | 1 cut(s) | 484 |
| FauNDI | CATATG | 1 cut(s) | 457 |
| FbaI | TGATCA | 1 cut(s) | 864 |
| Fnu4HI | GCNGC | 5 cut(s) | 71, 717, 990, 993, 996 |
| FokI | GGATG | 7 cut(s) | 458, 647, 760, 776, 1077, 1223, 1245 |
| FriOI | GRGCYC | 1 cut(s) | 419 |
| Fsp4HI | GCNGC | 5 cut(s) | 71, 717, 990, 993, 996 |
| FspBI | CTAG | 2 cut(s) | 1079, 1485 |
| GluI | GCNGC | 5 cut(s) | 71, 717, 990, 993, 996 |
| GsuI | CTGGAG | 1 cut(s) | 662 |
| HaeIII | GGCC | 4 cut(s) | 5, 44, 134, 1235 |
| HapII | CCGG | 4 cut(s) | 32, 760, 845, 1050 |
| HgaI | GACGC | 1 cut(s) | 1347 |
| Hin1II | CATG | 6 cut(s) | 788, 896, 914, 1148, 1220, 1539 |
| HincII | GTYRAC | 2 cut(s) | 97, 738 |
| HindII | GTYRAC | 2 cut(s) | 97, 738 |
| HinfI | GANTC | 7 cut(s) | 23, 354, 647, 776, 880, 1022, 1189 |
| HpaII | CCGG | 4 cut(s) | 32, 760, 845, 1050 |
| HphI | GGTGA | 4 cut(s) | 94, 785, 833, 1132 |
| Hpy166II | GTNNAC | 3 cut(s) | 97, 738, 809 |
| Hpy188I | TCNGA | 8 cut(s) | 28, 192, 421, 610, 652, 817, 1194, 1444 |
| Hpy188III | TCNNGA | 8 cut(s) | 563, 679, 693, 877, 963, 1019, 1412, 1496 |
| Hpy8I | GTNNAC | 3 cut(s) | 97, 738, 809 |
| Hpy99I | CGWCG | 1 cut(s) | 104 |
| HpyAV | CCTTC | 6 cut(s) | 58, 310, 762, 812, 1376, 1396 |
| HpyCH4III | ACNGT | 2 cut(s) | 1211, 1516 |
| HpyCH4IV | ACGT | 2 cut(s) | 442, 1427 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 41, 76, 995, 1241 |
| HpyF3I | CTNAG | 8 cut(s) | 323, 350, 400, 420, 702, 803, 1443, 1473 |
| HpySE526I | ACGT | 2 cut(s) | 442, 1427 |
| Hsp92II | CATG | 6 cut(s) | 788, 896, 914, 1148, 1220, 1539 |
| Ksp22I | TGATCA | 1 cut(s) | 864 |
| Kzo9I | GATC | 7 cut(s) | 28, 127, 179, 346, 610, 864, 1387 |
| LmnI | GCTCC | 7 cut(s) | 67, 414, 681, 724, 981, 1292, 1314 |
| Lsp1109I | GCAGC | 5 cut(s) | 57, 703, 1001, 1004, 1007 |
| LweI | GCATC | 3 cut(s) | 738, 1099, 1146 |
| MaeI | CTAG | 2 cut(s) | 1079, 1485 |
| MaeII | ACGT | 2 cut(s) | 442, 1427 |
| MalI | GATC | 7 cut(s) | 30, 129, 181, 348, 612, 866, 1389 |
| MboI | GATC | 7 cut(s) | 28, 127, 179, 346, 610, 864, 1387 |
| MfeI | CAATTG | 1 cut(s) | 1330 |
| MflI | RGATCY | 2 cut(s) | 346, 610 |
| MhlI | GDGCHC | 3 cut(s) | 419, 766, 1057 |
| MlsI | TGGCCA | 3 cut(s) | 5, 44, 1235 |
| MluNI | TGGCCA | 3 cut(s) | 5, 44, 1235 |
| MlyI | GAGTC | 1 cut(s) | 785 |
| MmeI | TCCRAC | 2 cut(s) | 588, 1050 |
| Mox20I | TGGCCA | 3 cut(s) | 5, 44, 1235 |
| Mph1103I | ATGCAT | 3 cut(s) | 366, 1139, 1218 |
| MroXI | GAANNNNTTC | 1 cut(s) | 225 |
| MscI | TGGCCA | 3 cut(s) | 5, 44, 1235 |
| MseI | TTAA | 2 cut(s) | 428, 1382 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1221 |
| Msp20I | TGGCCA | 3 cut(s) | 5, 44, 1235 |
| MspI | CCGG | 4 cut(s) | 32, 760, 845, 1050 |
| MspR9I | CCNGG | 2 cut(s) | 761, 845 |
| MssI | GTTTAAAC | 1 cut(s) | 1383 |
| MunI | CAATTG | 1 cut(s) | 1330 |
| Mva1269I | GAATGC | 1 cut(s) | 1491 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 41, 76, 995, 1241 |
| NciI | CCSGG | 2 cut(s) | 761, 845 |
| NdeI | CATATG | 1 cut(s) | 457 |
| NdeII | GATC | 7 cut(s) | 28, 127, 179, 346, 610, 864, 1387 |
| NlaIII | CATG | 6 cut(s) | 788, 896, 914, 1148, 1220, 1539 |
| NlaIV | GGNNCC | 4 cut(s) | 612, 967, 1054, 1294 |
| NmeAIII | GCCGAG | 1 cut(s) | 128 |
| NsiI | ATGCAT | 3 cut(s) | 366, 1139, 1218 |
| NspI | RCATGY | 3 cut(s) | 788, 914, 1220 |
| PctI | GAATGC | 1 cut(s) | 1491 |
| PdmI | GAANNNNTTC | 1 cut(s) | 225 |
| PfeI | GAWTC | 6 cut(s) | 23, 354, 647, 880, 1022, 1189 |
| Pfl23II | CGTACG | 1 cut(s) | 1428 |
| PkrI | GCNGC | 5 cut(s) | 72, 718, 991, 994, 997 |
| Ple19I | CGATCG | 1 cut(s) | 1390 |
| PleI | GAGTC | 1 cut(s) | 784 |
| PmeI | GTTTAAAC | 1 cut(s) | 1383 |
| PpsI | GAGTC | 1 cut(s) | 784 |
| Ppu21I | YACGTR | 2 cut(s) | 443, 1428 |
| Psp124BI | GAGCTC | 1 cut(s) | 419 |
| PspLI | CGTACG | 1 cut(s) | 1428 |
| PspN4I | GGNNCC | 4 cut(s) | 612, 967, 1054, 1294 |
| PstI | CTGCAG | 1 cut(s) | 75 |
| PstNI | CAGNNNCTG | 1 cut(s) | 79 |
| PsuI | RGATCY | 2 cut(s) | 346, 610 |
| PvuI | CGATCG | 1 cut(s) | 1390 |
| RsaI | GTAC | 3 cut(s) | 441, 525, 1430 |
| RsaNI | GTAC | 3 cut(s) | 440, 524, 1429 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1221 |
| SacI | GAGCTC | 1 cut(s) | 419 |
| SaqAI | TTAA | 2 cut(s) | 428, 1382 |
| SatI | GCNGC | 5 cut(s) | 71, 717, 990, 993, 996 |
| Sau3AI | GATC | 7 cut(s) | 28, 127, 179, 346, 610, 864, 1387 |
| ScaI | AGTACT | 1 cut(s) | 525 |
| SchI | GAGTC | 1 cut(s) | 785 |
| ScrFI | CCNGG | 2 cut(s) | 761, 845 |
| SduI | GDGCHC | 3 cut(s) | 419, 766, 1057 |
| SfaNI | GCATC | 3 cut(s) | 738, 1099, 1146 |
| SfcI | CTRYAG | 2 cut(s) | 71, 276 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1221 |
| SmlI | CTYRAG | 2 cut(s) | 155, 1252 |
| SmoI | CTYRAG | 2 cut(s) | 155, 1252 |
| SnaBI | TACGTA | 1 cut(s) | 443 |
| SsiI | CCGC | 3 cut(s) | 236, 491, 1335 |
| SspMI | CTAG | 2 cut(s) | 1079, 1485 |
| SstI | GAGCTC | 1 cut(s) | 419 |
| StyD4I | CCNGG | 2 cut(s) | 759, 843 |
| StyI | CCWWGG | 2 cut(s) | 243, 1263 |
| TaaI | ACNGT | 2 cut(s) | 1211, 1516 |
| TaiI | ACGT | 2 cut(s) | 445, 1430 |
| TaqI | TCGA | 4 cut(s) | 126, 229, 511, 1390 |
| TaqII | GACCGA | 1 cut(s) | 720 |
| TatI | WGTACW | 1 cut(s) | 523 |
| TfiI | GAWTC | 6 cut(s) | 23, 354, 647, 880, 1022, 1189 |
| Tru1I | TTAA | 2 cut(s) | 428, 1382 |
| Tru9I | TTAA | 2 cut(s) | 428, 1382 |
| TscAI | CASTG | 1 cut(s) | 1185 |
| TseI | GCWGC | 5 cut(s) | 70, 716, 989, 992, 995 |
| TspDTI | ATGAA | 3 cut(s) | 292, 460, 1118 |
| TspGWI | ACGGA | 3 cut(s) | 427, 1301, 1446 |
| TspRI | CASTG | 1 cut(s) | 1185 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1082 |
| XapI | RAATTY | 1 cut(s) | 1407 |
| XceI | RCATGY | 3 cut(s) | 788, 914, 1220 |
| XmnI | GAANNNNTTC | 1 cut(s) | 225 |
| XspI | CTAG | 2 cut(s) | 1079, 1485 |
| ZrmI | AGTACT | 1 cut(s) | 525 |
| Zsp2I | ATGCAT | 3 cut(s) | 366, 1139, 1218 |