Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001451

Physical Location & Seq

Genomic Coordinates Forward (+)

22169390 .. 22171083

Gene Structure 1694 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0154400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1290 bp

ATGGAAAAGCATTTAGCTCTCGCCTTTTCTCTTTGCTTGCTTGTTCTCTTCCACGGCTGCTTAGCCAGACACCAACAATCTCAGTCCAGCCAGCAAAATGAGTGCCAGCTGAACCAGATCCAAGCCCGCGAGCCTGACAACCGTATTGAGACTGAAGCAGGTCGGATTGAGTCATGGGACTACAACCAGGATGACTTGCAGTGCGCTGGTGTCGCTGTTCAAAGAATCACCATTGAGCGTAATGGCCTTCACTTGCCTTCTTACACTAACACTCCAAGGCTTGCGTACGTTGTACAAGGTAGGGGTCATCTAGGGATGGTATTCCCTGGCTGTCCTGAGACATTTGAGGAGTCTGAGCAATCTGATGAAGAACAACAGGGTCAGCAACAACAACAGCAAGGCCAACAACGGGGCCGCCAGCAACAGGGACGCCGACAAGGACAATTCGGACAGCAAGGCCAACAAGGACAACAAGACTTTGAACAGCTAGACCGACACCAGAGGGTGCGACGCGTCAAAGAAGGTGATGTTATCGCAATCCCCGCCGGAGTCACGACCTGGTCTCACAACGACGGTGACAGATCTCTTGTTTTTGTTACTCTTTTAGACATCGGCAATAACCACAACCAGCTTGACCAAAACCCAAGGGGAAACAACAACAACAACATCTTTGCCGGCTTCGAGACAGAGCTCCTCGCCGATGCTCTCAACATCGACCAACAGACTGCCCAGCAGCTCCAGGGACAGAACGACAACAGGCCACAGATTGTTAGGGTTCAGGGACGTCTCGACTTTGTCGAGCCACCACGGTCACAGAGGGAGGAAAGACAACTGCAAGGACAACAAGGACAACAGGGACAGAATGGCCTTGAGGAGCTATTCTGCCACATGAAGATCAAGCAGAACATCGGCAAGCCTTCAATGGCTGACGTCTTCAGCCCGCAAGCCGGTCGCATCAGCACCCTCAACAGCTTTAGCATGCCTATTCTCAGGCACCTCCGCCTCAGTGCTGAGAGAGGCTTCTTGTACAACAATGCTATCCACAGCCCACATTGGAACTTGAATGCCCATGAGATCGTCTATGTCATCAGAGGTAGCGCCAGGGTTCAGGTGGTGAACGACAACGGCGAGACCATCTTGGACGACCAGGTCCGCCAGGGACAGCTCTTCGTCGTGCCACAGAACCACGCCGTGTTGCAGAAGGCCATGAGCAACGGATACGAGTACATTGCCTTCAAGACCGATGACAATGCCATGATCAACACTCTGGCTGGCAGGACCTATCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0032870 GO:0033612 GO:0033993 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050896 GO:0051716 GO:0070647 GO:0070696 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

429

Amino Acids

48.68

Weight (kDa)

5.93

Isoelectric Point (pI)

55.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	41 - 243	4.6e-26	Cupin
Cupin_1	PF00190	302 - 426	1.7e-32	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001451)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07360 AT3G07360 AT3G07360 AT3G07360 AT3G07360 AT3G07360 AT3G07360 AT3G07360 AT3G07360 AT3G07360
fragaria_vesca	FvH4_2g18070 FvH4_6g01250
malus_domestica	MD04G1235600.v1.1 MD05G1165400.v1.1 MD10G1154600.v1.1 MD12G1253300.v1.1
prunus_persica	Prupe.6G355500_v2.0.a1 Prupe.6G355500_v2.0.a1 Prupe.6G355500_v2.0.a1 Prupe.6G355500_v2.0.a1 Prupe.6G355500_v2.0.a1 Prupe.8G193500_v2.0.a1 Prupe.8G193500_v2.0.a1 Prupe.8G193500_v2.0.a1 Prupe.8G193500_v2.0.a1 Prupe.8G193500_v2.0.a1
pyrus_communis	pycom04g20910 pycom05g15400 pycom10g09710 pycom10g13370 pycom12g23240
rosa_chinensis	RchiOBHm_Chr3g0448811 RchiOBHm_Chr6g0283461
rosa_laevigata	RLG00000012824 RLG00000025873
rosa_multiflora	Rmu_sc0003116.1_g000024 Rmu_sc0004959.1_g000016
rosa_roxburghii	Rroxscaffold_6G00427030 Rroxscaffold_7G00185520
rosa_rugosa	Rorug02G0616500.1 Rorug02G0616600 Rorug06G0154400
rosa_samantha	Rh3AG014900 Rh3BG014700 Rh3CG013600 Rh3DG015200 Rh6AG266700 Rh6BG269200 Rh6CG269100 Rh6DG262500
rosa_wichuraiana	Rw3G001100 Rw6G023090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1148
AatII	GACGTC	2 cut(s)	787, 933
Acc36I	ACCTGC	1 cut(s)	149
AccB1I	GGYRCC	1 cut(s)	993
AccII	CGCG	2 cut(s)	129, 513
AciI	CCGC	6 cut(s)	127, 415, 543, 941, 1000, 1153
AclWI	GGATC	1 cut(s)	112
AcuI	CTGAAG	2 cut(s)	174, 919
AcyI	GRCGYC	3 cut(s)	430, 784, 930
AdeI	CACNNNGTG	1 cut(s)	1192
AfaI	GTAC	4 cut(s)	287, 294, 1028, 1226
AfiI	CCNNNNNNNGG	3 cut(s)	409, 424, 947
AflIII	ACRYGT	1 cut(s)	511
AgsI	TTSAA	5 cut(s)	221, 482, 921, 1063, 1237
AjnI	CCWGG	7 cut(s)	186, 325, 557, 738, 1100, 1146, 1155
AluBI	AGCT	9 cut(s)	17, 109, 487, 631, 691, 736, 877, 972, 1165
AluI	AGCT	9 cut(s)	17, 109, 487, 631, 691, 736, 877, 972, 1165
Alw21I	GWGCWC	1 cut(s)	693
Alw26I	GTCTC	6 cut(s)	143, 332, 567, 677, 791, 1124
AlwI	GGATC	1 cut(s)	112
AoxI	GGCC	7 cut(s)	244, 400, 412, 457, 758, 865, 1203
ApeKI	GCWGC	2 cut(s)	57, 733
AspLEI	GCGC	2 cut(s)	206, 1100
AspS9I	GGNCC	3 cut(s)	412, 1150, 1278
AsuHPI	GGTGA	4 cut(s)	220, 536, 587, 1126
AvaII	GGWCC	2 cut(s)	1150, 1278
BanI	GGYRCC	1 cut(s)	993
BanII	GRGCYC	1 cut(s)	693
BarI	GAAGNNNNNNTAC	2 cut(s)	1217, 1249
BbsI	GAAGAC	1 cut(s)	925
Bbv12I	GWGCWC	1 cut(s)	693
BbvI	GCAGC	2 cut(s)	44, 745
BccI	CCATC	2 cut(s)	310, 1142
BceAI	ACGGC	3 cut(s)	70, 1141, 1175
BcgI	CGANNNNNNTGC	6 cut(s)	932, 966, 1211, 1232, 1245, 1266
BciT130I	CCWGG	7 cut(s)	188, 327, 559, 740, 1102, 1148, 1157
BciVI	GTATCC	1 cut(s)	1211
BclI	TGATCA	1 cut(s)	1257
BcoDI	GTCTC	6 cut(s)	143, 332, 567, 677, 791, 1124
BfaI	CTAG	2 cut(s)	311, 488
BfoI	RGCGCY	1 cut(s)	1101
BfuAI	ACCTGC	1 cut(s)	149
BfuI	GTATCC	1 cut(s)	1211
BglII	AGATCT	1 cut(s)	581
BisI	GCNGC	3 cut(s)	58, 415, 734
BlpI	GCTNAGC	1 cut(s)	61
BlsI	GCNGC	3 cut(s)	59, 416, 735
Bme1390I	CCNGG	7 cut(s)	188, 327, 559, 740, 1102, 1148, 1157
Bme18I	GGWCC	2 cut(s)	1150, 1278
BmgT120I	GGNCC	3 cut(s)	412, 1150, 1278
BmiI	GGNNCC	2 cut(s)	413, 995
BmrFI	CCNGG	7 cut(s)	188, 327, 559, 740, 1102, 1148, 1157
BmsI	GCATC	2 cut(s)	691, 963
BpiI	GAAGAC	1 cut(s)	925
BpmI	CTGGAG	1 cut(s)	722
Bpu1102I	GCTNAGC	1 cut(s)	61
BpuEI	CTTGAG	1 cut(s)	890
BsaHI	GRCGYC	3 cut(s)	430, 784, 930
BsaI	GGTCTC	2 cut(s)	567, 1124
BsaJI	CCNNGG	8 cut(s)	52, 275, 325, 644, 739, 806, 1101, 1156
BsaXI	ACNNNNNCTCC	2 cut(s)	256, 286
Bsc4I	CCNNNNNNNGG	3 cut(s)	409, 424, 947
Bse118I	RCCGGY	2 cut(s)	674, 947
Bse3DI	GCAATG	1 cut(s)	1227
BseBI	CCWGG	7 cut(s)	188, 327, 559, 740, 1102, 1148, 1157
BseDI	CCNNGG	8 cut(s)	52, 275, 325, 644, 739, 806, 1101, 1156
BseGI	GGATG	2 cut(s)	196, 321
BseLI	CCNNNNNNNGG	3 cut(s)	409, 424, 947
BseMI	GCAATG	1 cut(s)	1227
BseMII	CTCAG	6 cut(s)	95, 327, 345, 1002, 1003, 1018
BseRI	GAGGAG	3 cut(s)	362, 683, 887
BseXI	GCAGC	2 cut(s)	44, 745
BseYI	CCCAGC	1 cut(s)	729
Bsh1236I	CGCG	2 cut(s)	129, 513
Bsh1285I	CGRYCG	1 cut(s)	952
BshFI	GGCC	7 cut(s)	246, 402, 414, 459, 760, 867, 1205
BshNI	GGYRCC	1 cut(s)	993
BsiEI	CGRYCG	1 cut(s)	952
BsiHKAI	GWGCWC	1 cut(s)	693
BsiSI	CCGG	3 cut(s)	546, 675, 948
BsiWI	CGTACG	1 cut(s)	285
BslFI	GGGAC	6 cut(s)	191, 441, 756, 795, 870, 1173
BslI	CCNNNNNNNGG	3 cut(s)	409, 424, 947
BsmAI	GTCTC	6 cut(s)	143, 332, 567, 677, 791, 1124
BsmBI	CGTCTC	1 cut(s)	791
BsmFI	GGGAC	6 cut(s)	191, 441, 756, 795, 870, 1173
BsmI	GAATGC	1 cut(s)	1069
BsnI	GGCC	7 cut(s)	246, 402, 414, 459, 760, 867, 1205
Bso31I	GGTCTC	2 cut(s)	567, 1124
Bsp1286I	GDGCHC	1 cut(s)	693
Bsp1407I	TGTACA	2 cut(s)	292, 1026
Bsp143I	GATC	5 cut(s)	117, 581, 894, 1074, 1257
Bsp1720I	GCTNAGC	1 cut(s)	61
BspACI	CCGC	6 cut(s)	127, 415, 543, 941, 1000, 1153
BspANI	GGCC	7 cut(s)	246, 402, 414, 459, 760, 867, 1205
BspCNI	CTCAG	6 cut(s)	94, 328, 346, 1002, 1003, 1017
BspFNI	CGCG	2 cut(s)	129, 513
BspLI	GGNNCC	2 cut(s)	413, 995
BspMI	ACCTGC	1 cut(s)	149
BspPI	GGATC	1 cut(s)	112
BspQI	GCTCTTC	1 cut(s)	1172
BspT107I	GGYRCC	1 cut(s)	993
BspTNI	GGTCTC	2 cut(s)	567, 1124
BsrDI	GCAATG	1 cut(s)	1227
BsrFI	RCCGGY	2 cut(s)	674, 947
BsrGI	TGTACA	2 cut(s)	292, 1026
BssAI	RCCGGY	2 cut(s)	674, 947
BssECI	CCNNGG	8 cut(s)	52, 275, 325, 644, 739, 806, 1101, 1156
BssMI	GATC	5 cut(s)	117, 581, 894, 1074, 1257
BssNI	GRCGYC	3 cut(s)	430, 784, 930
BssT1I	CCWWGG	2 cut(s)	275, 644
Bst2UI	CCWGG	7 cut(s)	188, 327, 559, 740, 1102, 1148, 1157
Bst4CI	ACNGT	3 cut(s)	143, 575, 810
Bst6I	CTCTTC	2 cut(s)	53, 1172
BstACI	GRCGYC	3 cut(s)	430, 784, 930
BstAUI	TGTACA	2 cut(s)	292, 1026
BstDEI	CTNAG	7 cut(s)	61, 81, 336, 354, 989, 1004, 1011
BstDSI	CCRYGG	2 cut(s)	52, 806
BstF5I	GGATG	2 cut(s)	196, 321
BstFNI	CGCG	2 cut(s)	129, 513
BstH2I	RGCGCY	1 cut(s)	1101
BstHHI	GCGC	2 cut(s)	206, 1100
BstKTI	GATC	5 cut(s)	120, 584, 897, 1077, 1260
BstMAI	GTCTC	6 cut(s)	143, 332, 567, 677, 791, 1124
BstMBI	GATC	5 cut(s)	117, 581, 894, 1074, 1257
BstMCI	CGRYCG	1 cut(s)	952
BstMWI	GCNNNNNNNGC	2 cut(s)	212, 542
BstNI	CCWGG	7 cut(s)	188, 327, 559, 740, 1102, 1148, 1157
BstNSI	RCATGY	1 cut(s)	982
BstSCI	CCNGG	7 cut(s)	186, 325, 557, 738, 1100, 1146, 1155
BstUI	CGCG	2 cut(s)	129, 513
BstV1I	GCAGC	2 cut(s)	44, 745
BstV2I	GAAGAC	1 cut(s)	925
BstX2I	RGATCY	2 cut(s)	117, 581
BstYI	RGATCY	2 cut(s)	117, 581
BsuI	GTATCC	1 cut(s)	1211
BsuRI	GGCC	7 cut(s)	246, 402, 414, 459, 760, 867, 1205
BtgI	CCRYGG	2 cut(s)	52, 806
BtsCI	GGATG	2 cut(s)	196, 321
BtsI	GCAGTG	1 cut(s)	206
BtsIMutI	CAGTG	2 cut(s)	206, 1012
BveI	ACCTGC	1 cut(s)	149
CfoI	GCGC	2 cut(s)	206, 1100
Cfr10I	RCCGGY	2 cut(s)	674, 947
Cfr13I	GGNCC	3 cut(s)	412, 1150, 1278
CseI	GACGC	3 cut(s)	438, 502, 519
CsiI	ACCWGGT	2 cut(s)	557, 1146
Csp6I	GTAC	4 cut(s)	286, 293, 1027, 1225
CviAII	CATG	6 cut(s)	174, 889, 979, 1070, 1207, 1255
CviQI	GTAC	4 cut(s)	286, 293, 1027, 1225
DdeI	CTNAG	7 cut(s)	61, 81, 336, 354, 989, 1004, 1011
DpnI	GATC	5 cut(s)	119, 583, 896, 1076, 1259
DpnII	GATC	5 cut(s)	117, 581, 894, 1074, 1257
DraIII	CACNNNGTG	1 cut(s)	1192
DrdI	GACNNNNNNGTC	1 cut(s)	1148
DseDI	GACNNNNNNGTC	1 cut(s)	1148
Eam1104I	CTCTTC	2 cut(s)	53, 1172
EarI	CTCTTC	2 cut(s)	53, 1172
EciI	GGCGGA	2 cut(s)	989, 1142
Ecl136II	GAGCTC	1 cut(s)	691
Eco130I	CCWWGG	2 cut(s)	275, 644
Eco24I	GRGCYC	1 cut(s)	693
Eco31I	GGTCTC	2 cut(s)	567, 1124
Eco47I	GGWCC	2 cut(s)	1150, 1278
Eco53kI	GAGCTC	1 cut(s)	691
Eco57I	CTGAAG	2 cut(s)	174, 919
EcoICRI	GAGCTC	1 cut(s)	691
EcoO109I	RGGNCCY	1 cut(s)	1278
EcoRII	CCWGG	7 cut(s)	186, 325, 557, 738, 1100, 1146, 1155
EcoT14I	CCWWGG	2 cut(s)	275, 644
EcoT38I	GRGCYC	1 cut(s)	693
ErhI	CCWWGG	2 cut(s)	275, 644
Esp3I	CGTCTC	1 cut(s)	791
FaeI	CATG	6 cut(s)	177, 892, 982, 1073, 1210, 1258
FaiI	YATR	7 cut(s)	175, 890, 980, 1071, 1083, 1208, 1256
FaqI	GGGAC	6 cut(s)	191, 441, 756, 795, 870, 1173
FatI	CATG	6 cut(s)	173, 888, 978, 1069, 1206, 1254
FauI	CCCGC	3 cut(s)	134, 550, 948
FbaI	TGATCA	1 cut(s)	1257
Fnu4HI	GCNGC	3 cut(s)	58, 415, 734
FokI	GGATG	2 cut(s)	203, 328
FriOI	GRGCYC	1 cut(s)	693
Fsp4HI	GCNGC	3 cut(s)	58, 415, 734
FspBI	CTAG	2 cut(s)	311, 488
GlaI	GCGC	2 cut(s)	205, 1099
GluI	GCNGC	3 cut(s)	58, 415, 734
GsaI	CCCAGC	1 cut(s)	733
GsuI	CTGGAG	1 cut(s)	722
HaeII	RGCGCY	1 cut(s)	1101
HaeIII	GGCC	7 cut(s)	246, 402, 414, 459, 760, 867, 1205
HapII	CCGG	3 cut(s)	546, 675, 948
HgaI	GACGC	3 cut(s)	438, 502, 519
HhaI	GCGC	2 cut(s)	206, 1100
Hin1I	GRCGYC	3 cut(s)	430, 784, 930
Hin1II	CATG	6 cut(s)	177, 892, 982, 1073, 1210, 1258
Hin6I	GCGC	2 cut(s)	204, 1098
HinP1I	GCGC	2 cut(s)	204, 1098
HinfI	GANTC	4 cut(s)	170, 225, 350, 549
HpaII	CCGG	3 cut(s)	546, 675, 948
HphI	GGTGA	4 cut(s)	220, 536, 587, 1126
Hpy166II	GTNNAC	1 cut(s)	1117
Hpy188I	TCNGA	5 cut(s)	165, 355, 364, 449, 1091
Hpy188III	TCNNGA	5 cut(s)	335, 553, 682, 788, 1237
Hpy8I	GTNNAC	1 cut(s)	1117
Hpy99I	CGWCG	3 cut(s)	513, 575, 1175
HpyAV	CCTTC	6 cut(s)	257, 267, 515, 927, 1195, 1243
HpyCH4III	ACNGT	3 cut(s)	143, 575, 810
HpyCH4IV	ACGT	3 cut(s)	288, 784, 930
HpyCH4V	TGCA	3 cut(s)	199, 835, 1198
HpyF10VI	GCNNNNNNNGC	2 cut(s)	212, 542
HpyF3I	CTNAG	7 cut(s)	61, 81, 336, 354, 989, 1004, 1011
HpySE526I	ACGT	3 cut(s)	288, 784, 930
Hsp92I	GRCGYC	3 cut(s)	430, 784, 930
Hsp92II	CATG	6 cut(s)	177, 892, 982, 1073, 1210, 1258
HspAI	GCGC	2 cut(s)	204, 1098
KroI	GCCGGC	1 cut(s)	674
KroNI	GCCGGC	1 cut(s)	676
Ksp22I	TGATCA	1 cut(s)	1257
Kzo9I	GATC	5 cut(s)	117, 581, 894, 1074, 1257
LguI	GCTCTTC	1 cut(s)	1172
LmnI	GCTCC	3 cut(s)	696, 741, 874
Lsp1109I	GCAGC	2 cut(s)	44, 745
LweI	GCATC	2 cut(s)	691, 963
MabI	ACCWGGT	2 cut(s)	557, 1146
MaeI	CTAG	2 cut(s)	311, 488
MaeII	ACGT	3 cut(s)	288, 784, 930
MaeIII	GTNAC	4 cut(s)	550, 575, 595, 810
MalI	GATC	5 cut(s)	119, 583, 896, 1076, 1259
MboI	GATC	5 cut(s)	117, 581, 894, 1074, 1257
MboII	GAAGA	5 cut(s)	40, 380, 904, 925, 1159
MflI	RGATCY	2 cut(s)	117, 581
MhlI	GDGCHC	1 cut(s)	693
MluCI	AATT	1 cut(s)	443
MluI	ACGCGT	1 cut(s)	511
MlyI	GAGTC	3 cut(s)	179, 359, 558
MmeI	TCCRAC	1 cut(s)	143
MroNI	GCCGGC	1 cut(s)	674
MseI	TTAA	1 cut(s)	1288
MspA1I	CMGCKG	1 cut(s)	109
MspI	CCGG	3 cut(s)	546, 675, 948
MspR9I	CCNGG	7 cut(s)	188, 327, 559, 740, 1102, 1148, 1157
Mva1269I	GAATGC	1 cut(s)	1069
MvaI	CCWGG	7 cut(s)	188, 327, 559, 740, 1102, 1148, 1157
MvnI	CGCG	2 cut(s)	129, 513
MwoI	GCNNNNNNNGC	2 cut(s)	212, 542
NaeI	GCCGGC	1 cut(s)	676
NdeII	GATC	5 cut(s)	117, 581, 894, 1074, 1257
NgoMIV	GCCGGC	1 cut(s)	674
NlaIII	CATG	6 cut(s)	177, 892, 982, 1073, 1210, 1258
NlaIV	GGNNCC	2 cut(s)	413, 995
NmuCI	GTSAC	3 cut(s)	550, 575, 810
NspI	RCATGY	1 cut(s)	982
PaeI	GCATGC	1 cut(s)	982
PciSI	GCTCTTC	1 cut(s)	1172
PcsI	WCGNNNNNNNCGW	2 cut(s)	795, 1125
PctI	GAATGC	1 cut(s)	1069
PdiI	GCCGGC	1 cut(s)	676
PfeI	GAWTC	1 cut(s)	225
Pfl23II	CGTACG	1 cut(s)	285
PflFI	GACNNNGTC	3 cut(s)	559, 794, 1148
PkrI	GCNGC	3 cut(s)	59, 416, 735
PleI	GAGTC	3 cut(s)	178, 358, 557
PpsI	GAGTC	3 cut(s)	178, 358, 557
PpuMI	RGGWCCY	1 cut(s)	1278
Psp124BI	GAGCTC	1 cut(s)	693
Psp5II	RGGWCCY	1 cut(s)	1278
Psp6I	CCWGG	7 cut(s)	186, 325, 557, 738, 1100, 1146, 1155
PspFI	CCCAGC	1 cut(s)	729
PspGI	CCWGG	7 cut(s)	186, 325, 557, 738, 1100, 1146, 1155
PspLI	CGTACG	1 cut(s)	285
PspN4I	GGNNCC	2 cut(s)	413, 995
PspPI	GGNCC	3 cut(s)	412, 1150, 1278
PspPPI	RGGWCCY	1 cut(s)	1278
PsuI	RGATCY	2 cut(s)	117, 581
PsyI	GACNNNGTC	3 cut(s)	559, 794, 1148
PvuII	CAGCTG	1 cut(s)	109
RsaI	GTAC	4 cut(s)	287, 294, 1028, 1226
RsaNI	GTAC	4 cut(s)	286, 293, 1027, 1225
SacI	GAGCTC	1 cut(s)	693
SapI	GCTCTTC	1 cut(s)	1172
SaqAI	TTAA	1 cut(s)	1288
SatI	GCNGC	3 cut(s)	58, 415, 734
Sau3AI	GATC	5 cut(s)	117, 581, 894, 1074, 1257
Sau96I	GGNCC	3 cut(s)	412, 1150, 1278
SchI	GAGTC	3 cut(s)	179, 359, 558
ScrFI	CCNGG	7 cut(s)	188, 327, 559, 740, 1102, 1148, 1157
SduI	GDGCHC	1 cut(s)	693
SexAI	ACCWGGT	2 cut(s)	557, 1146
SfaNI	GCATC	2 cut(s)	691, 963
SinI	GGWCC	2 cut(s)	1150, 1278
SmlI	CTYRAG	1 cut(s)	869
SmoI	CTYRAG	1 cut(s)	869
SphI	GCATGC	1 cut(s)	982
Sse9I	AATT	1 cut(s)	443
SsiI	CCGC	6 cut(s)	127, 415, 543, 941, 1000, 1153
SspMI	CTAG	2 cut(s)	311, 488
SstI	GAGCTC	1 cut(s)	693
StyD4I	CCNGG	7 cut(s)	186, 325, 557, 738, 1100, 1146, 1155
StyI	CCWWGG	2 cut(s)	275, 644
TaaI	ACNGT	3 cut(s)	143, 575, 810
TaiI	ACGT	3 cut(s)	291, 787, 933
TaqI	TCGA	4 cut(s)	681, 714, 789, 798
TaqII	GACCGA	2 cut(s)	507, 1256
TasI	AATT	1 cut(s)	443
TatI	WGTACW	3 cut(s)	292, 1026, 1224
TauI	GCSGC	1 cut(s)	417
TfiI	GAWTC	1 cut(s)	225
Tru1I	TTAA	1 cut(s)	1288
Tru9I	TTAA	1 cut(s)	1288
TscAI	CASTG	2 cut(s)	206, 1012
TseFI	GTSAC	3 cut(s)	550, 575, 810
TseI	GCWGC	2 cut(s)	57, 733
Tsp45I	GTSAC	3 cut(s)	550, 575, 810
TspDTI	ATGAA	2 cut(s)	381, 905
TspGWI	ACGGA	1 cut(s)	1230
TspRI	CASTG	2 cut(s)	206, 1012
Tth111I	GACNNNGTC	3 cut(s)	559, 794, 1148
VpaK11BI	GGWCC	2 cut(s)	1150, 1278
XceI	RCATGY	1 cut(s)	982
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1108
XspI	CTAG	2 cut(s)	311, 488
ZraI	GACGTC	2 cut(s)	785, 931

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.