RING-type E3 ubiquitin transferase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 231, 884 |
| AccI | GTMKAC | 2 cut(s) | 96, 611 |
| AccII | CGCG | 1 cut(s) | 489 |
| AccIII | TCCGGA | 1 cut(s) | 676 |
| AciI | CCGC | 4 cut(s) | 38, 50, 53, 236 |
| AclWI | GGATC | 4 cut(s) | 23, 429, 437, 450 |
| AcoI | YGGCCR | 1 cut(s) | 1065 |
| AcuI | CTGAAG | 2 cut(s) | 669, 1046 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 330, 916, 1096, 1233 |
| Alw21I | GWGCWC | 1 cut(s) | 360 |
| Alw26I | GTCTC | 4 cut(s) | 132, 252, 278, 1151 |
| AlwI | GGATC | 4 cut(s) | 23, 429, 437, 450 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 79 |
| Aor13HI | TCCGGA | 1 cut(s) | 676 |
| AoxI | GGCC | 3 cut(s) | 132, 296, 1065 |
| ApeKI | GCWGC | 5 cut(s) | 70, 548, 821, 824, 827 |
| AspS9I | GGNCC | 1 cut(s) | 798 |
| AsuC2I | CCSGG | 2 cut(s) | 218, 593 |
| AsuHPI | GGTGA | 3 cut(s) | 94, 103, 691 |
| AsuII | TTCGAA | 1 cut(s) | 242 |
| AvaII | GGWCC | 1 cut(s) | 798 |
| BaeGI | GKGCMC | 3 cut(s) | 236, 598, 889 |
| BalI | TGGCCA | 1 cut(s) | 1067 |
| BamHI | GGATCC | 1 cut(s) | 442 |
| BanI | GGYRCC | 2 cut(s) | 231, 884 |
| BbsI | GAAGAC | 2 cut(s) | 513, 1022 |
| Bbv12I | GWGCWC | 1 cut(s) | 360 |
| BbvI | GCAGC | 5 cut(s) | 57, 535, 811, 833, 839 |
| BccI | CCATC | 4 cut(s) | 461, 659, 1076, 1098 |
| BceAI | ACGGC | 1 cut(s) | 51 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 562, 596, 774, 808 |
| BclI | TGATCA | 1 cut(s) | 696 |
| BcnI | CCSGG | 2 cut(s) | 218, 593 |
| BcoDI | GTCTC | 4 cut(s) | 132, 252, 278, 1151 |
| BfaI | CTAG | 3 cut(s) | 455, 911, 1317 |
| BfmI | CTRYAG | 2 cut(s) | 71, 825 |
| BisI | GCNGC | 6 cut(s) | 51, 71, 549, 822, 825, 828 |
| BlsI | GCNGC | 6 cut(s) | 52, 72, 550, 823, 826, 829 |
| Bme1390I | CCNGG | 2 cut(s) | 218, 593 |
| Bme18I | GGWCC | 1 cut(s) | 798 |
| BmgT120I | GGNCC | 1 cut(s) | 798 |
| BmiI | GGNNCC | 4 cut(s) | 233, 444, 799, 886 |
| BmrFI | CCNGG | 2 cut(s) | 218, 593 |
| BmsI | GCATC | 2 cut(s) | 570, 978 |
| BpiI | GAAGAC | 2 cut(s) | 513, 1022 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 129, 161 |
| Bpu10I | CCTNAGC | 1 cut(s) | 534 |
| Bpu14I | TTCGAA | 1 cut(s) | 242 |
| BpuEI | CTTGAG | 4 cut(s) | 155, 176, 494, 1069 |
| BpuMI | CCSGG | 2 cut(s) | 218, 593 |
| Bsa29I | ATCGAT | 1 cut(s) | 126 |
| BsaI | GGTCTC | 2 cut(s) | 252, 1151 |
| BsaWI | WCCGGW | 2 cut(s) | 228, 676 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 330, 916, 1096, 1233 |
| Bse118I | RCCGGY | 1 cut(s) | 323 |
| Bse3DI | GCAATG | 5 cut(s) | 416, 785, 823, 1083, 1188 |
| BseAI | TCCGGA | 1 cut(s) | 676 |
| BseCI | ATCGAT | 1 cut(s) | 126 |
| BseGI | GGATG | 8 cut(s) | 303, 472, 570, 585, 673, 922, 1068, 1090 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 330, 916, 1096, 1233 |
| BseMI | GCAATG | 5 cut(s) | 416, 785, 823, 1083, 1188 |
| BseMII | CTCAG | 3 cut(s) | 525, 641, 649 |
| BseSI | GKGCMC | 3 cut(s) | 236, 598, 889 |
| BseXI | GCAGC | 5 cut(s) | 57, 535, 811, 833, 839 |
| Bsh1236I | CGCG | 1 cut(s) | 489 |
| Bsh1285I | CGRYCG | 1 cut(s) | 794 |
| BshFI | GGCC | 3 cut(s) | 134, 298, 1067 |
| BshNI | GGYRCC | 2 cut(s) | 231, 884 |
| BshVI | ATCGAT | 1 cut(s) | 126 |
| BsiEI | CGRYCG | 1 cut(s) | 794 |
| BsiHKAI | GWGCWC | 1 cut(s) | 360 |
| BsiSI | CCGG | 5 cut(s) | 218, 229, 324, 592, 677 |
| BslFI | GGGAC | 1 cut(s) | 811 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 330, 916, 1096, 1233 |
| BsmAI | GTCTC | 4 cut(s) | 132, 252, 278, 1151 |
| BsmBI | CGTCTC | 1 cut(s) | 278 |
| BsmFI | GGGAC | 1 cut(s) | 811 |
| BsmI | GAATGC | 1 cut(s) | 1323 |
| BsnI | GGCC | 3 cut(s) | 134, 298, 1067 |
| Bso31I | GGTCTC | 2 cut(s) | 252, 1151 |
| Bsp119I | TTCGAA | 1 cut(s) | 242 |
| Bsp1286I | GDGCHC | 4 cut(s) | 236, 360, 598, 889 |
| Bsp13I | TCCGGA | 1 cut(s) | 676 |
| Bsp68I | TCGCGA | 1 cut(s) | 489 |
| BspACI | CCGC | 4 cut(s) | 38, 50, 53, 236 |
| BspANI | GGCC | 3 cut(s) | 134, 298, 1067 |
| BspCNI | CTCAG | 3 cut(s) | 526, 640, 648 |
| BspDI | ATCGAT | 1 cut(s) | 126 |
| BspEI | TCCGGA | 1 cut(s) | 676 |
| BspFNI | CGCG | 1 cut(s) | 489 |
| BspHI | TCATGA | 1 cut(s) | 976 |
| BspLI | GGNNCC | 4 cut(s) | 233, 444, 799, 886 |
| BspMAI | CTGCAG | 2 cut(s) | 75, 829 |
| BspPI | GGATC | 4 cut(s) | 23, 429, 437, 450 |
| BspT104I | TTCGAA | 1 cut(s) | 242 |
| BspT107I | GGYRCC | 2 cut(s) | 231, 884 |
| BspTNI | GGTCTC | 2 cut(s) | 252, 1151 |
| BsrDI | GCAATG | 5 cut(s) | 416, 785, 823, 1083, 1188 |
| BsrFI | RCCGGY | 1 cut(s) | 323 |
| BssAI | RCCGGY | 1 cut(s) | 323 |
| Bst4CI | ACNGT | 1 cut(s) | 1043 |
| Bst6I | CTCTTC | 2 cut(s) | 216, 569 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 355 |
| BstBI | TTCGAA | 1 cut(s) | 242 |
| BstC8I | GCNNGC | 4 cut(s) | 236, 325, 1139, 1281 |
| BstDEI | CTNAG | 4 cut(s) | 534, 627, 635, 1305 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 914 |
| BstF5I | GGATG | 8 cut(s) | 303, 472, 570, 585, 673, 922, 1068, 1090 |
| BstFNI | CGCG | 1 cut(s) | 489 |
| BstMAI | GTCTC | 4 cut(s) | 132, 252, 278, 1151 |
| BstMCI | CGRYCG | 1 cut(s) | 794 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 50, 76, 355, 827, 1073, 1134 |
| BstNSI | RCATGY | 2 cut(s) | 620, 1052 |
| BstSCI | CCNGG | 2 cut(s) | 216, 591 |
| BstSFI | CTRYAG | 2 cut(s) | 71, 825 |
| BstSLI | GKGCMC | 3 cut(s) | 236, 598, 889 |
| BstUI | CGCG | 1 cut(s) | 489 |
| BstV1I | GCAGC | 5 cut(s) | 57, 535, 811, 833, 839 |
| BstV2I | GAAGAC | 2 cut(s) | 513, 1022 |
| BstX2I | RGATCY | 1 cut(s) | 442 |
| BstYI | RGATCY | 1 cut(s) | 442 |
| Bsu15I | ATCGAT | 1 cut(s) | 126 |
| BsuRI | GGCC | 3 cut(s) | 134, 298, 1067 |
| BsuTUI | ATCGAT | 1 cut(s) | 126 |
| BtgZI | GCGATG | 1 cut(s) | 886 |
| BtsCI | GGATG | 8 cut(s) | 303, 472, 570, 585, 673, 922, 1068, 1090 |
| BtsI | GCAGTG | 1 cut(s) | 1017 |
| BtsIMutI | CAGTG | 1 cut(s) | 1017 |
| BtuMI | TCGCGA | 1 cut(s) | 489 |
| Cac8I | GCNNGC | 4 cut(s) | 236, 325, 1139, 1281 |
| CaiI | CAGNNNCTG | 1 cut(s) | 79 |
| CciI | TCATGA | 1 cut(s) | 976 |
| Cfr10I | RCCGGY | 1 cut(s) | 323 |
| Cfr13I | GGNCC | 1 cut(s) | 798 |
| ClaI | ATCGAT | 1 cut(s) | 126 |
| CseI | GACGC | 1 cut(s) | 1179 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1083, 1118 |
| CviAII | CATG | 5 cut(s) | 617, 725, 977, 1049, 1368 |
| DdeI | CTNAG | 4 cut(s) | 534, 627, 635, 1305 |
| EaeI | YGGCCR | 1 cut(s) | 1065 |
| Eam1104I | CTCTTC | 2 cut(s) | 216, 569 |
| EarI | CTCTTC | 2 cut(s) | 216, 569 |
| EciI | GGCGGA | 1 cut(s) | 68 |
| Eco31I | GGTCTC | 2 cut(s) | 252, 1151 |
| Eco32I | GATATC | 1 cut(s) | 405 |
| Eco47I | GGWCC | 1 cut(s) | 798 |
| Eco57I | CTGAAG | 2 cut(s) | 669, 1046 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 914 |
| EcoRV | GATATC | 1 cut(s) | 405 |
| Esp3I | CGTCTC | 1 cut(s) | 278 |
| FaeI | CATG | 5 cut(s) | 620, 728, 980, 1052, 1371 |
| FaqI | GGGAC | 1 cut(s) | 811 |
| FatI | CATG | 5 cut(s) | 616, 724, 976, 1048, 1367 |
| FauI | CCCGC | 1 cut(s) | 243 |
| FbaI | TGATCA | 1 cut(s) | 696 |
| FblI | GTMKAC | 2 cut(s) | 96, 611 |
| Fnu4HI | GCNGC | 6 cut(s) | 51, 71, 549, 822, 825, 828 |
| FokI | GGATG | 8 cut(s) | 290, 479, 577, 592, 660, 909, 1055, 1077 |
| Fsp4HI | GCNGC | 6 cut(s) | 51, 71, 549, 822, 825, 828 |
| FspBI | CTAG | 3 cut(s) | 455, 911, 1317 |
| GluI | GCNGC | 6 cut(s) | 51, 71, 549, 822, 825, 828 |
| HaeIII | GGCC | 3 cut(s) | 134, 298, 1067 |
| HapII | CCGG | 5 cut(s) | 218, 229, 324, 592, 677 |
| HgaI | GACGC | 1 cut(s) | 1179 |
| Hin1II | CATG | 5 cut(s) | 620, 728, 980, 1052, 1371 |
| HincII | GTYRAC | 2 cut(s) | 97, 570 |
| HindII | GTYRAC | 2 cut(s) | 97, 570 |
| HinfI | GANTC | 7 cut(s) | 23, 382, 479, 608, 712, 854, 1021 |
| HpaII | CCGG | 5 cut(s) | 218, 229, 324, 592, 677 |
| HphI | GGTGA | 3 cut(s) | 94, 103, 691 |
| Hpy166II | GTNNAC | 4 cut(s) | 97, 570, 612, 1169 |
| Hpy188I | TCNGA | 8 cut(s) | 28, 33, 156, 442, 484, 564, 649, 1026 |
| Hpy8I | GTNNAC | 4 cut(s) | 97, 570, 612, 1169 |
| Hpy99I | CGWCG | 3 cut(s) | 37, 101, 104 |
| HpyAV | CCTTC | 6 cut(s) | 40, 58, 594, 644, 998, 1208 |
| HpyCH4III | ACNGT | 1 cut(s) | 1043 |
| HpyCH4IV | ACGT | 1 cut(s) | 287 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 50, 76, 355, 827, 1073, 1134 |
| HpyF3I | CTNAG | 4 cut(s) | 534, 627, 635, 1305 |
| HpySE526I | ACGT | 1 cut(s) | 287 |
| Hsp92II | CATG | 5 cut(s) | 620, 728, 980, 1052, 1371 |
| Kpn2I | TCCGGA | 1 cut(s) | 676 |
| KroI | GCCGGC | 1 cut(s) | 323 |
| KroNI | GCCGGC | 1 cut(s) | 325 |
| Ksp22I | TGATCA | 1 cut(s) | 696 |
| LmnI | GCTCC | 4 cut(s) | 67, 556, 813, 1146 |
| Lsp1109I | GCAGC | 5 cut(s) | 57, 535, 811, 833, 839 |
| LweI | GCATC | 2 cut(s) | 570, 978 |
| MaeI | CTAG | 3 cut(s) | 455, 911, 1317 |
| MaeII | ACGT | 1 cut(s) | 287 |
| MfeI | CAATTG | 2 cut(s) | 90, 1162 |
| MflI | RGATCY | 1 cut(s) | 442 |
| MhlI | GDGCHC | 4 cut(s) | 236, 360, 598, 889 |
| MlsI | TGGCCA | 1 cut(s) | 1067 |
| MluCI | AATT | 7 cut(s) | 90, 161, 434, 765, 1162, 1183, 1239 |
| MluNI | TGGCCA | 1 cut(s) | 1067 |
| MlyI | GAGTC | 2 cut(s) | 17, 617 |
| MmeI | TCCRAC | 3 cut(s) | 56, 420, 882 |
| Mox20I | TGGCCA | 1 cut(s) | 1067 |
| MroI | TCCGGA | 1 cut(s) | 676 |
| MroNI | GCCGGC | 1 cut(s) | 323 |
| MscI | TGGCCA | 1 cut(s) | 1067 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1053 |
| Msp20I | TGGCCA | 1 cut(s) | 1067 |
| MspA1I | CMGCKG | 1 cut(s) | 824 |
| MspI | CCGG | 5 cut(s) | 218, 229, 324, 592, 677 |
| MspR9I | CCNGG | 2 cut(s) | 218, 593 |
| MunI | CAATTG | 2 cut(s) | 90, 1162 |
| Mva1269I | GAATGC | 1 cut(s) | 1323 |
| MvnI | CGCG | 1 cut(s) | 489 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 50, 76, 355, 827, 1073, 1134 |
| NaeI | GCCGGC | 1 cut(s) | 325 |
| NciI | CCSGG | 2 cut(s) | 218, 593 |
| NgoMIV | GCCGGC | 1 cut(s) | 323 |
| NlaIII | CATG | 5 cut(s) | 620, 728, 980, 1052, 1371 |
| NlaIV | GGNNCC | 4 cut(s) | 233, 444, 799, 886 |
| NruI | TCGCGA | 1 cut(s) | 489 |
| NspI | RCATGY | 2 cut(s) | 620, 1052 |
| NspV | TTCGAA | 1 cut(s) | 242 |
| PagI | TCATGA | 1 cut(s) | 976 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 41 |
| PctI | GAATGC | 1 cut(s) | 1323 |
| PdiI | GCCGGC | 1 cut(s) | 325 |
| PfeI | GAWTC | 5 cut(s) | 382, 479, 712, 854, 1021 |
| PkrI | GCNGC | 6 cut(s) | 52, 72, 550, 823, 826, 829 |
| Ple19I | CGATCG | 1 cut(s) | 794 |
| PleI | GAGTC | 2 cut(s) | 17, 616 |
| PpsI | GAGTC | 2 cut(s) | 17, 616 |
| PspN4I | GGNNCC | 4 cut(s) | 233, 444, 799, 886 |
| PspPI | GGNCC | 1 cut(s) | 798 |
| PstI | CTGCAG | 2 cut(s) | 75, 829 |
| PstNI | CAGNNNCTG | 1 cut(s) | 79 |
| PsuI | RGATCY | 1 cut(s) | 442 |
| PvuI | CGATCG | 1 cut(s) | 794 |
| PvuII | CAGCTG | 1 cut(s) | 824 |
| RruI | TCGCGA | 1 cut(s) | 489 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1053 |
| SalI | GTCGAC | 1 cut(s) | 95 |
| SatI | GCNGC | 6 cut(s) | 51, 71, 549, 822, 825, 828 |
| Sau96I | GGNCC | 1 cut(s) | 798 |
| SchI | GAGTC | 2 cut(s) | 17, 617 |
| ScrFI | CCNGG | 2 cut(s) | 218, 593 |
| SduI | GDGCHC | 4 cut(s) | 236, 360, 598, 889 |
| SfaNI | GCATC | 2 cut(s) | 570, 978 |
| SfcI | CTRYAG | 2 cut(s) | 71, 825 |
| SfuI | TTCGAA | 1 cut(s) | 242 |
| SinI | GGWCC | 1 cut(s) | 798 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1053 |
| SmlI | CTYRAG | 4 cut(s) | 170, 191, 509, 1084 |
| SmoI | CTYRAG | 4 cut(s) | 170, 191, 509, 1084 |
| Sse9I | AATT | 7 cut(s) | 90, 161, 434, 765, 1162, 1183, 1239 |
| SsiI | CCGC | 4 cut(s) | 38, 50, 53, 236 |
| SspMI | CTAG | 3 cut(s) | 455, 911, 1317 |
| StyD4I | CCNGG | 2 cut(s) | 216, 591 |
| TaaI | ACNGT | 1 cut(s) | 1043 |
| TaiI | ACGT | 1 cut(s) | 290 |
| TaqI | TCGA | 7 cut(s) | 96, 126, 242, 424, 524, 1222, 1333 |
| TasI | AATT | 7 cut(s) | 90, 161, 434, 765, 1162, 1183, 1239 |
| TauI | GCSGC | 1 cut(s) | 53 |
| TfiI | GAWTC | 5 cut(s) | 382, 479, 712, 854, 1021 |
| TscAI | CASTG | 1 cut(s) | 1017 |
| TseI | GCWGC | 5 cut(s) | 70, 548, 821, 824, 827 |
| TspDTI | ATGAA | 3 cut(s) | 292, 662, 950 |
| TspGWI | ACGGA | 1 cut(s) | 1133 |
| TspRI | CASTG | 1 cut(s) | 1017 |
| VpaK11BI | GGWCC | 1 cut(s) | 798 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 914 |
| XceI | RCATGY | 2 cut(s) | 620, 1052 |
| XmiI | GTMKAC | 2 cut(s) | 96, 611 |
| XspI | CTAG | 3 cut(s) | 455, 911, 1317 |