RING-type E3 ubiquitin transferase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 296 |
| AccII | CGCG | 1 cut(s) | 1068 |
| AciI | CCGC | 1 cut(s) | 1079 |
| AclWI | GGATC | 2 cut(s) | 692, 1071 |
| AcoI | YGGCCR | 5 cut(s) | 3, 223, 303, 954, 1281 |
| AcsI | RAATTY | 2 cut(s) | 529, 1347 |
| AcuI | CTGAAG | 4 cut(s) | 241, 270, 524, 957 |
| AfaI | GTAC | 1 cut(s) | 1291 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 272, 1120 |
| AjnI | CCWGG | 2 cut(s) | 5, 684 |
| AleI | CACNNNNGTG | 1 cut(s) | 442 |
| AluBI | AGCT | 6 cut(s) | 193, 466, 589, 872, 987, 1144 |
| AluI | AGCT | 6 cut(s) | 193, 466, 589, 872, 987, 1144 |
| Alw21I | GWGCWC | 2 cut(s) | 913, 1197 |
| Alw26I | GTCTC | 7 cut(s) | 20, 26, 32, 94, 137, 207, 641 |
| AlwI | GGATC | 2 cut(s) | 692, 1071 |
| ApeKI | GCWGC | 4 cut(s) | 578, 845, 848, 869 |
| ApoI | RAATTY | 2 cut(s) | 529, 1347 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1303, 1335 |
| AspS9I | GGNCC | 6 cut(s) | 289, 682, 1017, 1248, 1311, 1326 |
| AsuC2I | CCSGG | 3 cut(s) | 518, 681, 1315 |
| AsuHPI | GGTGA | 3 cut(s) | 606, 647, 669 |
| AvaII | GGWCC | 3 cut(s) | 289, 1248, 1311 |
| BaeGI | GKGCMC | 1 cut(s) | 628 |
| BalI | TGGCCA | 5 cut(s) | 5, 225, 305, 956, 1283 |
| BbsI | GAAGAC | 2 cut(s) | 165, 258 |
| Bbv12I | GWGCWC | 2 cut(s) | 913, 1197 |
| BbvI | GCAGC | 4 cut(s) | 590, 832, 835, 881 |
| BccI | CCATC | 5 cut(s) | 215, 275, 1028, 1122, 1238 |
| BceAI | ACGGC | 1 cut(s) | 59 |
| BciT130I | CCWGG | 2 cut(s) | 7, 686 |
| BclI | TGATCA | 2 cut(s) | 565, 720 |
| BcnI | CCSGG | 3 cut(s) | 518, 681, 1315 |
| BcoDI | GTCTC | 7 cut(s) | 20, 26, 32, 94, 137, 207, 641 |
| BfaI | CTAG | 1 cut(s) | 1110 |
| BfmI | CTRYAG | 2 cut(s) | 133, 1049 |
| BisI | GCNGC | 4 cut(s) | 579, 846, 849, 870 |
| BlsI | GCNGC | 4 cut(s) | 580, 847, 850, 871 |
| Bme1390I | CCNGG | 5 cut(s) | 7, 518, 681, 686, 1315 |
| Bme18I | GGWCC | 3 cut(s) | 289, 1248, 1311 |
| BmgT120I | GGNCC | 6 cut(s) | 289, 682, 1017, 1248, 1311, 1326 |
| BmiI | GGNNCC | 2 cut(s) | 291, 823 |
| BmrFI | CCNGG | 5 cut(s) | 7, 518, 681, 686, 1315 |
| BmsI | GCATC | 3 cut(s) | 787, 955, 1179 |
| BoxI | GACNNNNGTC | 1 cut(s) | 14 |
| BpiI | GAAGAC | 2 cut(s) | 165, 258 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 35, 67 |
| BpmI | CTGGAG | 2 cut(s) | 294, 1050 |
| BpuEI | CTTGAG | 1 cut(s) | 1373 |
| BpuMI | CCSGG | 3 cut(s) | 518, 681, 1315 |
| BsaBI | GATNNNNATC | 2 cut(s) | 696, 702 |
| BsaI | GGTCTC | 1 cut(s) | 641 |
| BsaJI | CCNNGG | 4 cut(s) | 75, 226, 517, 783 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 272, 1120 |
| Bse1I | ACTGG | 5 cut(s) | 108, 313, 957, 1341, 1375 |
| Bse3DI | GCAATG | 3 cut(s) | 514, 533, 847 |
| Bse8I | GATNNNNATC | 2 cut(s) | 696, 702 |
| BseBI | CCWGG | 2 cut(s) | 7, 686 |
| BseDI | CCNNGG | 4 cut(s) | 75, 226, 517, 783 |
| BseGI | GGATG | 5 cut(s) | 333, 554, 778, 789, 946 |
| BseJI | GATNNNNATC | 2 cut(s) | 696, 702 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 272, 1120 |
| BseMI | GCAATG | 3 cut(s) | 514, 533, 847 |
| BseMII | CTCAG | 4 cut(s) | 21, 27, 33, 679 |
| BseNI | ACTGG | 5 cut(s) | 108, 313, 957, 1341, 1375 |
| BseRI | GAGGAG | 1 cut(s) | 38 |
| BseSI | GKGCMC | 1 cut(s) | 628 |
| BseXI | GCAGC | 4 cut(s) | 590, 832, 835, 881 |
| BsgI | GTGCAG | 1 cut(s) | 466 |
| Bsh1236I | CGCG | 1 cut(s) | 1068 |
| BsiHKAI | GWGCWC | 2 cut(s) | 913, 1197 |
| BsiSI | CCGG | 3 cut(s) | 517, 680, 1314 |
| BslFI | GGGAC | 2 cut(s) | 249, 1330 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 272, 1120 |
| BsmAI | GTCTC | 7 cut(s) | 20, 26, 32, 94, 137, 207, 641 |
| BsmFI | GGGAC | 2 cut(s) | 249, 1330 |
| Bso31I | GGTCTC | 1 cut(s) | 641 |
| Bsp1286I | GDGCHC | 3 cut(s) | 628, 913, 1197 |
| Bsp143I | GATC | 6 cut(s) | 565, 697, 703, 720, 1063, 1243 |
| Bsp19I | CCATGG | 1 cut(s) | 226 |
| BspACI | CCGC | 1 cut(s) | 1079 |
| BspCNI | CTCAG | 4 cut(s) | 22, 28, 34, 678 |
| BspFNI | CGCG | 1 cut(s) | 1068 |
| BspHI | TCATGA | 2 cut(s) | 282, 748 |
| BspLI | GGNNCC | 2 cut(s) | 291, 823 |
| BspMAI | CTGCAG | 1 cut(s) | 1053 |
| BspPI | GGATC | 2 cut(s) | 692, 1071 |
| BspTNI | GGTCTC | 1 cut(s) | 641 |
| BsrDI | GCAATG | 3 cut(s) | 514, 533, 847 |
| BsrI | ACTGG | 5 cut(s) | 108, 313, 957, 1341, 1375 |
| BssECI | CCNNGG | 4 cut(s) | 75, 226, 517, 783 |
| BssMI | GATC | 6 cut(s) | 565, 697, 703, 720, 1063, 1243 |
| BssT1I | CCWWGG | 2 cut(s) | 226, 783 |
| Bst2UI | CCWGG | 2 cut(s) | 7, 686 |
| Bst4CI | ACNGT | 3 cut(s) | 400, 1153, 1294 |
| Bst6I | CTCTTC | 1 cut(s) | 1266 |
| BstC8I | GCNNGC | 1 cut(s) | 1142 |
| BstDEI | CTNAG | 4 cut(s) | 30, 36, 42, 665 |
| BstDSI | CCRYGG | 2 cut(s) | 75, 226 |
| BstF5I | GGATG | 5 cut(s) | 333, 554, 778, 789, 946 |
| BstFNI | CGCG | 1 cut(s) | 1068 |
| BstKTI | GATC | 6 cut(s) | 568, 700, 706, 723, 1066, 1246 |
| BstMAI | GTCTC | 7 cut(s) | 20, 26, 32, 94, 137, 207, 641 |
| BstMBI | GATC | 6 cut(s) | 565, 697, 703, 720, 1063, 1243 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 155, 164, 595, 604, 1025, 1097, 1146, 1167 |
| BstNI | CCWGG | 2 cut(s) | 7, 686 |
| BstNSI | RCATGY | 1 cut(s) | 369 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 14 |
| BstSCI | CCNGG | 5 cut(s) | 5, 516, 679, 684, 1313 |
| BstSFI | CTRYAG | 2 cut(s) | 133, 1049 |
| BstSLI | GKGCMC | 1 cut(s) | 628 |
| BstUI | CGCG | 1 cut(s) | 1068 |
| BstV1I | GCAGC | 4 cut(s) | 590, 832, 835, 881 |
| BstV2I | GAAGAC | 2 cut(s) | 165, 258 |
| BtgI | CCRYGG | 2 cut(s) | 75, 226 |
| BtsCI | GGATG | 5 cut(s) | 333, 554, 778, 789, 946 |
| BtsI | GCAGTG | 1 cut(s) | 1386 |
| BtsIMutI | CAGTG | 5 cut(s) | 306, 950, 1149, 1348, 1386 |
| Cac8I | GCNNGC | 1 cut(s) | 1142 |
| CciI | TCATGA | 2 cut(s) | 282, 748 |
| Cfr13I | GGNCC | 6 cut(s) | 289, 682, 1017, 1248, 1311, 1326 |
| CpoI | CGGWCCG | 1 cut(s) | 1311 |
| Csp6I | GTAC | 1 cut(s) | 1290 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 57, 92 |
| CspI | CGGWCCG | 1 cut(s) | 1311 |
| CviAII | CATG | 6 cut(s) | 227, 283, 366, 455, 749, 958 |
| CviQI | GTAC | 1 cut(s) | 1290 |
| DdeI | CTNAG | 4 cut(s) | 30, 36, 42, 665 |
| DpnI | GATC | 6 cut(s) | 567, 699, 705, 722, 1065, 1245 |
| DpnII | GATC | 6 cut(s) | 565, 697, 703, 720, 1063, 1243 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 296 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 296 |
| EaeI | YGGCCR | 5 cut(s) | 3, 223, 303, 954, 1281 |
| Eam1104I | CTCTTC | 1 cut(s) | 1266 |
| EarI | CTCTTC | 1 cut(s) | 1266 |
| Eco130I | CCWWGG | 2 cut(s) | 226, 783 |
| Eco31I | GGTCTC | 1 cut(s) | 641 |
| Eco32I | GATATC | 1 cut(s) | 524 |
| Eco47I | GGWCC | 3 cut(s) | 289, 1248, 1311 |
| Eco57I | CTGAAG | 4 cut(s) | 241, 270, 524, 957 |
| EcoO109I | RGGNCCY | 1 cut(s) | 289 |
| EcoRI | GAATTC | 1 cut(s) | 1347 |
| EcoRII | CCWGG | 2 cut(s) | 5, 684 |
| EcoRV | GATATC | 1 cut(s) | 524 |
| EcoT14I | CCWWGG | 2 cut(s) | 226, 783 |
| ErhI | CCWWGG | 2 cut(s) | 226, 783 |
| FaeI | CATG | 6 cut(s) | 230, 286, 369, 458, 752, 961 |
| FaqI | GGGAC | 2 cut(s) | 249, 1330 |
| FatI | CATG | 6 cut(s) | 226, 282, 365, 454, 748, 957 |
| FbaI | TGATCA | 2 cut(s) | 565, 720 |
| Fnu4HI | GCNGC | 4 cut(s) | 579, 846, 849, 870 |
| FokI | GGATG | 5 cut(s) | 320, 541, 765, 776, 933 |
| Fsp4HI | GCNGC | 4 cut(s) | 579, 846, 849, 870 |
| FspBI | CTAG | 1 cut(s) | 1110 |
| GluI | GCNGC | 4 cut(s) | 579, 846, 849, 870 |
| GsuI | CTGGAG | 2 cut(s) | 294, 1050 |
| HapII | CCGG | 3 cut(s) | 517, 680, 1314 |
| Hin1II | CATG | 6 cut(s) | 230, 286, 369, 458, 752, 961 |
| HinfI | GANTC | 4 cut(s) | 50, 638, 806, 878 |
| HpaII | CCGG | 3 cut(s) | 517, 680, 1314 |
| HphI | GGTGA | 3 cut(s) | 606, 647, 669 |
| Hpy166II | GTNNAC | 2 cut(s) | 614, 671 |
| Hpy188I | TCNGA | 7 cut(s) | 164, 260, 543, 565, 570, 1119, 1248 |
| Hpy8I | GTNNAC | 2 cut(s) | 614, 671 |
| HpyAV | CCTTC | 5 cut(s) | 175, 280, 347, 1008, 1114 |
| HpyCH4III | ACNGT | 3 cut(s) | 400, 1153, 1294 |
| HpyCH4IV | ACGT | 1 cut(s) | 902 |
| HpyCH4V | TGCA | 6 cut(s) | 447, 773, 851, 1051, 1217, 1307 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 155, 164, 595, 604, 1025, 1097, 1146, 1167 |
| HpyF3I | CTNAG | 4 cut(s) | 30, 36, 42, 665 |
| HpySE526I | ACGT | 1 cut(s) | 902 |
| Hsp92II | CATG | 6 cut(s) | 230, 286, 369, 458, 752, 961 |
| Ksp22I | TGATCA | 2 cut(s) | 565, 720 |
| Kzo9I | GATC | 6 cut(s) | 565, 697, 703, 720, 1063, 1243 |
| LmnI | GCTCC | 3 cut(s) | 451, 463, 1031 |
| Lsp1109I | GCAGC | 4 cut(s) | 590, 832, 835, 881 |
| LweI | GCATC | 3 cut(s) | 787, 955, 1179 |
| MaeI | CTAG | 1 cut(s) | 1110 |
| MaeII | ACGT | 1 cut(s) | 902 |
| MaeIII | GTNAC | 1 cut(s) | 47 |
| MalI | GATC | 6 cut(s) | 567, 699, 705, 722, 1065, 1245 |
| MboI | GATC | 6 cut(s) | 565, 697, 703, 720, 1063, 1243 |
| MfeI | CAATTG | 1 cut(s) | 659 |
| MhlI | GDGCHC | 3 cut(s) | 628, 913, 1197 |
| MlsI | TGGCCA | 5 cut(s) | 5, 225, 305, 956, 1283 |
| MluCI | AATT | 8 cut(s) | 529, 659, 744, 1044, 1207, 1253, 1263, 1347 |
| MluNI | TGGCCA | 5 cut(s) | 5, 225, 305, 956, 1283 |
| MlyI | GAGTC | 2 cut(s) | 44, 647 |
| MmeI | TCCRAC | 2 cut(s) | 75, 906 |
| Mox20I | TGGCCA | 5 cut(s) | 5, 225, 305, 956, 1283 |
| MscI | TGGCCA | 5 cut(s) | 5, 225, 305, 956, 1283 |
| MseI | TTAA | 2 cut(s) | 812, 1266 |
| MslI | CAYNNNNRTG | 1 cut(s) | 442 |
| Msp20I | TGGCCA | 5 cut(s) | 5, 225, 305, 956, 1283 |
| MspI | CCGG | 3 cut(s) | 517, 680, 1314 |
| MspR9I | CCNGG | 5 cut(s) | 7, 518, 681, 686, 1315 |
| MunI | CAATTG | 1 cut(s) | 659 |
| MvaI | CCWGG | 2 cut(s) | 7, 686 |
| MvnI | CGCG | 1 cut(s) | 1068 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 155, 164, 595, 604, 1025, 1097, 1146, 1167 |
| NciI | CCSGG | 3 cut(s) | 518, 681, 1315 |
| NcoI | CCATGG | 1 cut(s) | 226 |
| NdeII | GATC | 6 cut(s) | 565, 697, 703, 720, 1063, 1243 |
| NlaIII | CATG | 6 cut(s) | 230, 286, 369, 458, 752, 961 |
| NlaIV | GGNNCC | 2 cut(s) | 291, 823 |
| NmuCI | GTSAC | 1 cut(s) | 47 |
| NspI | RCATGY | 1 cut(s) | 369 |
| OliI | CACNNNNGTG | 1 cut(s) | 442 |
| PagI | TCATGA | 2 cut(s) | 282, 748 |
| PfeI | GAWTC | 2 cut(s) | 806, 878 |
| PkrI | GCNGC | 4 cut(s) | 580, 847, 850, 871 |
| PleI | GAGTC | 2 cut(s) | 44, 646 |
| PpsI | GAGTC | 2 cut(s) | 44, 646 |
| PpuMI | RGGWCCY | 1 cut(s) | 289 |
| PshAI | GACNNNNGTC | 1 cut(s) | 14 |
| Psp5II | RGGWCCY | 1 cut(s) | 289 |
| Psp6I | CCWGG | 2 cut(s) | 5, 684 |
| PspGI | CCWGG | 2 cut(s) | 5, 684 |
| PspN4I | GGNNCC | 2 cut(s) | 291, 823 |
| PspPI | GGNCC | 6 cut(s) | 289, 682, 1017, 1248, 1311, 1326 |
| PspPPI | RGGWCCY | 1 cut(s) | 289 |
| PstI | CTGCAG | 1 cut(s) | 1053 |
| RsaI | GTAC | 1 cut(s) | 1291 |
| RsaNI | GTAC | 1 cut(s) | 1290 |
| RseI | CAYNNNNRTG | 1 cut(s) | 442 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1311 |
| RsrII | CGGWCCG | 1 cut(s) | 1311 |
| SaqAI | TTAA | 2 cut(s) | 812, 1266 |
| SatI | GCNGC | 4 cut(s) | 579, 846, 849, 870 |
| Sau3AI | GATC | 6 cut(s) | 565, 697, 703, 720, 1063, 1243 |
| Sau96I | GGNCC | 6 cut(s) | 289, 682, 1017, 1248, 1311, 1326 |
| SchI | GAGTC | 2 cut(s) | 44, 647 |
| ScrFI | CCNGG | 5 cut(s) | 7, 518, 681, 686, 1315 |
| SduI | GDGCHC | 3 cut(s) | 628, 913, 1197 |
| SfaNI | GCATC | 3 cut(s) | 787, 955, 1179 |
| SfcI | CTRYAG | 2 cut(s) | 133, 1049 |
| SinI | GGWCC | 3 cut(s) | 289, 1248, 1311 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 442 |
| SmlI | CTYRAG | 1 cut(s) | 1352 |
| SmoI | CTYRAG | 1 cut(s) | 1352 |
| Sse9I | AATT | 8 cut(s) | 529, 659, 744, 1044, 1207, 1253, 1263, 1347 |
| SsiI | CCGC | 1 cut(s) | 1079 |
| SspMI | CTAG | 1 cut(s) | 1110 |
| StyD4I | CCNGG | 5 cut(s) | 5, 516, 679, 684, 1313 |
| StyI | CCWWGG | 2 cut(s) | 226, 783 |
| TaaI | ACNGT | 3 cut(s) | 400, 1153, 1294 |
| TaiI | ACGT | 1 cut(s) | 905 |
| TaqI | TCGA | 2 cut(s) | 592, 1322 |
| TaqII | GACCGA | 1 cut(s) | 339 |
| TasI | AATT | 8 cut(s) | 529, 659, 744, 1044, 1207, 1253, 1263, 1347 |
| TfiI | GAWTC | 2 cut(s) | 806, 878 |
| Tru1I | TTAA | 2 cut(s) | 812, 1266 |
| Tru9I | TTAA | 2 cut(s) | 812, 1266 |
| TscAI | CASTG | 5 cut(s) | 313, 957, 1156, 1348, 1393 |
| TseFI | GTSAC | 1 cut(s) | 47 |
| TseI | GCWGC | 4 cut(s) | 578, 845, 848, 869 |
| Tsp45I | GTSAC | 1 cut(s) | 47 |
| TspDTI | ATGAA | 7 cut(s) | 138, 299, 322, 366, 522, 737, 974 |
| TspGWI | ACGGA | 1 cut(s) | 1324 |
| TspRI | CASTG | 5 cut(s) | 313, 957, 1156, 1348, 1393 |
| VpaK11BI | GGWCC | 3 cut(s) | 289, 1248, 1311 |
| XapI | RAATTY | 2 cut(s) | 529, 1347 |
| XceI | RCATGY | 1 cut(s) | 369 |
| XspI | CTAG | 1 cut(s) | 1110 |