RING-type E3 ubiquitin transferase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1033 |
| AccI | GTMKAC | 1 cut(s) | 640 |
| AciI | CCGC | 2 cut(s) | 547, 567 |
| AclI | AACGTT | 1 cut(s) | 754 |
| AclWI | GGATC | 5 cut(s) | 129, 142, 394, 599, 695 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 2 cut(s) | 707, 996 |
| AfaI | GTAC | 4 cut(s) | 29, 90, 302, 1023 |
| AflIII | ACRYGT | 1 cut(s) | 395 |
| AgsI | TTSAA | 3 cut(s) | 35, 158, 902 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 313 |
| AjnI | CCWGG | 3 cut(s) | 138, 988, 1003 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 518, 550 |
| AluBI | AGCT | 6 cut(s) | 46, 151, 176, 424, 593, 784 |
| AluI | AGCT | 6 cut(s) | 46, 151, 176, 424, 593, 784 |
| Alw21I | GWGCWC | 3 cut(s) | 493, 780, 786 |
| Alw26I | GTCTC | 3 cut(s) | 694, 888, 1002 |
| Alw44I | GTGCAC | 1 cut(s) | 776 |
| AlwI | GGATC | 5 cut(s) | 129, 142, 394, 599, 695 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1025 |
| Ama87I | CYCGRG | 1 cut(s) | 1068 |
| AoxI | GGCC | 2 cut(s) | 3, 985 |
| ApaLI | GTGCAC | 1 cut(s) | 776 |
| ApeKI | GCWGC | 2 cut(s) | 295, 421 |
| ApoI | RAATTY | 2 cut(s) | 707, 996 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 90 |
| AspS9I | GGNCC | 4 cut(s) | 142, 289, 660, 986 |
| AsuC2I | CCSGG | 1 cut(s) | 486 |
| AsuHPI | GGTGA | 2 cut(s) | 325, 569 |
| AvaI | CYCGRG | 1 cut(s) | 1068 |
| AvaII | GGWCC | 3 cut(s) | 142, 289, 660 |
| BaeGI | GKGCMC | 1 cut(s) | 780 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BamHI | GGATCC | 1 cut(s) | 134 |
| BanII | GRGCYC | 2 cut(s) | 284, 786 |
| BauI | CACGAG | 1 cut(s) | 779 |
| Bbv12I | GWGCWC | 3 cut(s) | 493, 780, 786 |
| BbvI | GCAGC | 2 cut(s) | 282, 433 |
| BccI | CCATC | 4 cut(s) | 239, 450, 722, 923 |
| BceAI | ACGGC | 1 cut(s) | 876 |
| BciT130I | CCWGG | 3 cut(s) | 140, 990, 1005 |
| BciVI | GTATCC | 2 cut(s) | 1074, 1142 |
| BclI | TGATCA | 1 cut(s) | 763 |
| BcnI | CCSGG | 1 cut(s) | 486 |
| BcoDI | GTCTC | 3 cut(s) | 694, 888, 1002 |
| BfaI | CTAG | 1 cut(s) | 47 |
| BfmI | CTRYAG | 1 cut(s) | 296 |
| BfuAI | ACCTGC | 1 cut(s) | 1033 |
| BfuI | GTATCC | 2 cut(s) | 1074, 1142 |
| BisI | GCNGC | 4 cut(s) | 296, 422, 547, 568 |
| BlsI | GCNGC | 4 cut(s) | 297, 423, 548, 569 |
| BmcAI | AGTACT | 1 cut(s) | 90 |
| Bme1390I | CCNGG | 4 cut(s) | 140, 486, 990, 1005 |
| Bme18I | GGWCC | 3 cut(s) | 142, 289, 660 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 313 |
| BmeT110I | CYCGRG | 1 cut(s) | 1068 |
| BmgT120I | GGNCC | 4 cut(s) | 142, 289, 660, 986 |
| BmiI | GGNNCC | 3 cut(s) | 136, 144, 290 |
| BmrFI | CCNGG | 4 cut(s) | 140, 486, 990, 1005 |
| BmrI | ACTGGG | 1 cut(s) | 534 |
| BmsI | GCATC | 2 cut(s) | 132, 942 |
| BmuI | ACTGGG | 1 cut(s) | 534 |
| BpmI | CTGGAG | 1 cut(s) | 698 |
| Bpu10I | CCTNAGC | 1 cut(s) | 147 |
| BpuMI | CCSGG | 1 cut(s) | 486 |
| BsaJI | CCNNGG | 6 cut(s) | 117, 138, 284, 988, 1003, 1067 |
| BsaWI | WCCGGW | 1 cut(s) | 909 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 868, 898 |
| Bse118I | RCCGGY | 1 cut(s) | 291 |
| Bse1I | ACTGG | 5 cut(s) | 63, 261, 540, 648, 715 |
| Bse3DI | GCAATG | 2 cut(s) | 805, 961 |
| BseBI | CCWGG | 3 cut(s) | 140, 990, 1005 |
| BseDI | CCNNGG | 6 cut(s) | 117, 138, 284, 988, 1003, 1067 |
| BseGI | GGATG | 3 cut(s) | 211, 442, 733 |
| BseMI | GCAATG | 2 cut(s) | 805, 961 |
| BseMII | CTCAG | 5 cut(s) | 425, 577, 705, 840, 1100 |
| BseNI | ACTGG | 5 cut(s) | 63, 261, 540, 648, 715 |
| BseRI | GAGGAG | 1 cut(s) | 992 |
| BseSI | GKGCMC | 1 cut(s) | 780 |
| BseXI | GCAGC | 2 cut(s) | 282, 433 |
| BseYI | CCCAGC | 1 cut(s) | 1133 |
| BshFI | GGCC | 2 cut(s) | 5, 987 |
| BsiHKAI | GWGCWC | 3 cut(s) | 493, 780, 786 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1068 |
| BsiSI | CCGG | 4 cut(s) | 185, 292, 486, 910 |
| BslFI | GGGAC | 2 cut(s) | 302, 1119 |
| BsmAI | GTCTC | 3 cut(s) | 694, 888, 1002 |
| BsmFI | GGGAC | 2 cut(s) | 302, 1119 |
| BsmI | GAATGC | 1 cut(s) | 476 |
| BsnI | GGCC | 2 cut(s) | 5, 987 |
| BsoBI | CYCGRG | 1 cut(s) | 1068 |
| Bsp1286I | GDGCHC | 4 cut(s) | 284, 493, 780, 786 |
| Bsp143I | GATC | 6 cut(s) | 134, 386, 604, 700, 763, 946 |
| BspACI | CCGC | 2 cut(s) | 547, 567 |
| BspANI | GGCC | 2 cut(s) | 5, 987 |
| BspCNI | CTCAG | 5 cut(s) | 426, 576, 704, 841, 1101 |
| BspHI | TCATGA | 1 cut(s) | 766 |
| BspLI | GGNNCC | 3 cut(s) | 136, 144, 290 |
| BspMAI | CTGCAG | 1 cut(s) | 300 |
| BspMI | ACCTGC | 1 cut(s) | 1033 |
| BspPI | GGATC | 5 cut(s) | 129, 142, 394, 599, 695 |
| BsrDI | GCAATG | 2 cut(s) | 805, 961 |
| BsrFI | RCCGGY | 1 cut(s) | 291 |
| BsrI | ACTGG | 5 cut(s) | 63, 261, 540, 648, 715 |
| BssAI | RCCGGY | 1 cut(s) | 291 |
| BssECI | CCNNGG | 6 cut(s) | 117, 138, 284, 988, 1003, 1067 |
| BssMI | GATC | 6 cut(s) | 134, 386, 604, 700, 763, 946 |
| BssSI | CACGAG | 1 cut(s) | 779 |
| BssT1I | CCWWGG | 2 cut(s) | 117, 284 |
| Bst2BI | CACGAG | 1 cut(s) | 779 |
| Bst2UI | CCWGG | 3 cut(s) | 140, 990, 1005 |
| Bst4CI | ACNGT | 4 cut(s) | 131, 880, 1033, 1058 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 398, 407 |
| BstC8I | GCNNGC | 1 cut(s) | 500 |
| BstDEI | CTNAG | 6 cut(s) | 147, 434, 563, 691, 849, 1109 |
| BstF5I | GGATG | 3 cut(s) | 211, 442, 733 |
| BstKTI | GATC | 6 cut(s) | 137, 389, 607, 703, 766, 949 |
| BstMAI | GTCTC | 3 cut(s) | 694, 888, 1002 |
| BstMBI | GATC | 6 cut(s) | 134, 386, 604, 700, 763, 946 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 398, 407 |
| BstNI | CCWGG | 3 cut(s) | 140, 990, 1005 |
| BstNSI | RCATGY | 1 cut(s) | 399 |
| BstSCI | CCNGG | 4 cut(s) | 138, 484, 988, 1003 |
| BstSFI | CTRYAG | 1 cut(s) | 296 |
| BstSLI | GKGCMC | 1 cut(s) | 780 |
| BstV1I | GCAGC | 2 cut(s) | 282, 433 |
| BstX2I | RGATCY | 3 cut(s) | 134, 386, 604 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1145 |
| BstYI | RGATCY | 3 cut(s) | 134, 386, 604 |
| BsuI | GTATCC | 2 cut(s) | 1074, 1142 |
| BsuRI | GGCC | 2 cut(s) | 5, 987 |
| BtgZI | GCGATG | 1 cut(s) | 919 |
| BtsCI | GGATG | 3 cut(s) | 211, 442, 733 |
| BtsIMutI | CAGTG | 3 cut(s) | 136, 246, 268 |
| BveI | ACCTGC | 1 cut(s) | 1033 |
| Cac8I | GCNNGC | 1 cut(s) | 500 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1025 |
| CciI | TCATGA | 1 cut(s) | 766 |
| Cfr10I | RCCGGY | 1 cut(s) | 291 |
| Cfr13I | GGNCC | 4 cut(s) | 142, 289, 660, 986 |
| Csp6I | GTAC | 4 cut(s) | 28, 89, 301, 1022 |
| CviAII | CATG | 6 cut(s) | 257, 396, 471, 530, 767, 892 |
| CviQI | GTAC | 4 cut(s) | 28, 89, 301, 1022 |
| DdeI | CTNAG | 6 cut(s) | 147, 434, 563, 691, 849, 1109 |
| DpnI | GATC | 6 cut(s) | 136, 388, 606, 702, 765, 948 |
| DpnII | GATC | 6 cut(s) | 134, 386, 604, 700, 763, 946 |
| DraI | TTTAAA | 1 cut(s) | 1119 |
| DriI | GACNNNNNGTC | 1 cut(s) | 313 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 313 |
| Ecl136II | GAGCTC | 1 cut(s) | 784 |
| Eco130I | CCWWGG | 2 cut(s) | 117, 284 |
| Eco24I | GRGCYC | 2 cut(s) | 284, 786 |
| Eco47I | GGWCC | 3 cut(s) | 142, 289, 660 |
| Eco53kI | GAGCTC | 1 cut(s) | 784 |
| Eco88I | CYCGRG | 1 cut(s) | 1068 |
| EcoICRI | GAGCTC | 1 cut(s) | 784 |
| EcoO109I | RGGNCCY | 1 cut(s) | 986 |
| EcoRII | CCWGG | 3 cut(s) | 138, 988, 1003 |
| EcoT14I | CCWWGG | 2 cut(s) | 117, 284 |
| EcoT22I | ATGCAT | 1 cut(s) | 634 |
| EcoT38I | GRGCYC | 2 cut(s) | 284, 786 |
| ErhI | CCWWGG | 2 cut(s) | 117, 284 |
| FaeI | CATG | 6 cut(s) | 260, 399, 474, 533, 770, 895 |
| FaqI | GGGAC | 2 cut(s) | 302, 1119 |
| FatI | CATG | 6 cut(s) | 256, 395, 470, 529, 766, 891 |
| FbaI | TGATCA | 1 cut(s) | 763 |
| FblI | GTMKAC | 1 cut(s) | 640 |
| Fnu4HI | GCNGC | 4 cut(s) | 296, 422, 547, 568 |
| FokI | GGATG | 3 cut(s) | 198, 429, 740 |
| FriOI | GRGCYC | 2 cut(s) | 284, 786 |
| Fsp4HI | GCNGC | 4 cut(s) | 296, 422, 547, 568 |
| FspBI | CTAG | 1 cut(s) | 47 |
| GluI | GCNGC | 4 cut(s) | 296, 422, 547, 568 |
| GsaI | CCCAGC | 1 cut(s) | 1137 |
| GsuI | CTGGAG | 1 cut(s) | 698 |
| HaeIII | GGCC | 2 cut(s) | 5, 987 |
| HapII | CCGG | 4 cut(s) | 185, 292, 486, 910 |
| Hin1II | CATG | 6 cut(s) | 260, 399, 474, 533, 770, 895 |
| HinfI | GANTC | 1 cut(s) | 467 |
| HpaII | CCGG | 4 cut(s) | 185, 292, 486, 910 |
| HphI | GGTGA | 2 cut(s) | 325, 569 |
| Hpy166II | GTNNAC | 3 cut(s) | 641, 778, 1126 |
| Hpy188I | TCNGA | 4 cut(s) | 83, 680, 694, 1084 |
| Hpy188III | TCNNGA | 3 cut(s) | 704, 767, 1070 |
| Hpy8I | GTNNAC | 3 cut(s) | 641, 778, 1126 |
| HpyAV | CCTTC | 4 cut(s) | 64, 233, 250, 363 |
| HpyCH4III | ACNGT | 4 cut(s) | 131, 880, 1033, 1058 |
| HpyCH4IV | ACGT | 2 cut(s) | 611, 754 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 398, 407 |
| HpyF3I | CTNAG | 6 cut(s) | 147, 434, 563, 691, 849, 1109 |
| HpySE526I | ACGT | 2 cut(s) | 611, 754 |
| Hsp92II | CATG | 6 cut(s) | 260, 399, 474, 533, 770, 895 |
| Ksp22I | TGATCA | 1 cut(s) | 763 |
| Kzo9I | GATC | 6 cut(s) | 134, 386, 604, 700, 763, 946 |
| LmnI | GCTCC | 1 cut(s) | 488 |
| Lsp1109I | GCAGC | 2 cut(s) | 282, 433 |
| LweI | GCATC | 2 cut(s) | 132, 942 |
| MaeI | CTAG | 1 cut(s) | 47 |
| MaeII | ACGT | 2 cut(s) | 611, 754 |
| MaeIII | GTNAC | 3 cut(s) | 244, 263, 755 |
| MalI | GATC | 6 cut(s) | 136, 388, 606, 702, 765, 948 |
| MboI | GATC | 6 cut(s) | 134, 386, 604, 700, 763, 946 |
| MboII | GAAGA | 6 cut(s) | 47, 978, 981, 1085, 1100, 1103 |
| MflI | RGATCY | 3 cut(s) | 134, 386, 604 |
| MhlI | GDGCHC | 4 cut(s) | 284, 493, 780, 786 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 7 cut(s) | 153, 707, 804, 942, 972, 996, 1076 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 1 cut(s) | 476 |
| MmeI | TCCRAC | 3 cut(s) | 565, 911, 1024 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| Mph1103I | ATGCAT | 1 cut(s) | 634 |
| MroXI | GAANNNNTTC | 1 cut(s) | 90 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 4 cut(s) | 66, 672, 807, 1118 |
| MslI | CAYNNNNRTG | 1 cut(s) | 261 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspA1I | CMGCKG | 2 cut(s) | 424, 567 |
| MspI | CCGG | 4 cut(s) | 185, 292, 486, 910 |
| MspR9I | CCNGG | 4 cut(s) | 140, 486, 990, 1005 |
| Mva1269I | GAATGC | 1 cut(s) | 476 |
| MvaI | CCWGG | 3 cut(s) | 140, 990, 1005 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 398, 407 |
| NciI | CCSGG | 1 cut(s) | 486 |
| NdeII | GATC | 6 cut(s) | 134, 386, 604, 700, 763, 946 |
| NlaIII | CATG | 6 cut(s) | 260, 399, 474, 533, 770, 895 |
| NlaIV | GGNNCC | 3 cut(s) | 136, 144, 290 |
| NmuCI | GTSAC | 2 cut(s) | 244, 263 |
| NsiI | ATGCAT | 1 cut(s) | 634 |
| NspI | RCATGY | 1 cut(s) | 399 |
| PagI | TCATGA | 1 cut(s) | 766 |
| PciI | ACATGT | 1 cut(s) | 395 |
| PctI | GAATGC | 1 cut(s) | 476 |
| PdmI | GAANNNNTTC | 1 cut(s) | 90 |
| PkrI | GCNGC | 4 cut(s) | 297, 423, 548, 569 |
| PleI | GAGTC | 1 cut(s) | 475 |
| PpsI | GAGTC | 1 cut(s) | 475 |
| PscI | ACATGT | 1 cut(s) | 395 |
| Psp124BI | GAGCTC | 1 cut(s) | 786 |
| Psp1406I | AACGTT | 1 cut(s) | 754 |
| Psp6I | CCWGG | 3 cut(s) | 138, 988, 1003 |
| PspFI | CCCAGC | 1 cut(s) | 1133 |
| PspGI | CCWGG | 3 cut(s) | 138, 988, 1003 |
| PspN4I | GGNNCC | 3 cut(s) | 136, 144, 290 |
| PspPI | GGNCC | 4 cut(s) | 142, 289, 660, 986 |
| PstI | CTGCAG | 1 cut(s) | 300 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1025 |
| PsuI | RGATCY | 3 cut(s) | 134, 386, 604 |
| PvuII | CAGCTG | 1 cut(s) | 424 |
| RsaI | GTAC | 4 cut(s) | 29, 90, 302, 1023 |
| RsaNI | GTAC | 4 cut(s) | 28, 89, 301, 1022 |
| RseI | CAYNNNNRTG | 1 cut(s) | 261 |
| SacI | GAGCTC | 1 cut(s) | 786 |
| SaqAI | TTAA | 4 cut(s) | 66, 672, 807, 1118 |
| SatI | GCNGC | 4 cut(s) | 296, 422, 547, 568 |
| Sau3AI | GATC | 6 cut(s) | 134, 386, 604, 700, 763, 946 |
| Sau96I | GGNCC | 4 cut(s) | 142, 289, 660, 986 |
| ScaI | AGTACT | 1 cut(s) | 90 |
| SchI | GAGTC | 1 cut(s) | 476 |
| ScrFI | CCNGG | 4 cut(s) | 140, 486, 990, 1005 |
| SduI | GDGCHC | 4 cut(s) | 284, 493, 780, 786 |
| SfaNI | GCATC | 2 cut(s) | 132, 942 |
| SfcI | CTRYAG | 1 cut(s) | 296 |
| SinI | GGWCC | 3 cut(s) | 142, 289, 660 |
| SmiI | ATTTAAAT | 1 cut(s) | 1119 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 261 |
| Sse9I | AATT | 7 cut(s) | 153, 707, 804, 942, 972, 996, 1076 |
| SsiI | CCGC | 2 cut(s) | 547, 567 |
| SspI | AATATT | 1 cut(s) | 824 |
| SspMI | CTAG | 1 cut(s) | 47 |
| SstI | GAGCTC | 1 cut(s) | 786 |
| StyD4I | CCNGG | 4 cut(s) | 138, 484, 988, 1003 |
| StyI | CCWWGG | 2 cut(s) | 117, 284 |
| SwaI | ATTTAAAT | 1 cut(s) | 1119 |
| TaaI | ACNGT | 4 cut(s) | 131, 880, 1033, 1058 |
| TaiI | ACGT | 2 cut(s) | 614, 757 |
| TaqI | TCGA | 1 cut(s) | 94 |
| TasI | AATT | 7 cut(s) | 153, 707, 804, 942, 972, 996, 1076 |
| TatI | WGTACW | 1 cut(s) | 88 |
| TauI | GCSGC | 2 cut(s) | 549, 570 |
| Tru1I | TTAA | 4 cut(s) | 66, 672, 807, 1118 |
| Tru9I | TTAA | 4 cut(s) | 66, 672, 807, 1118 |
| TscAI | CASTG | 3 cut(s) | 136, 253, 268 |
| TseFI | GTSAC | 2 cut(s) | 244, 263 |
| TseI | GCWGC | 2 cut(s) | 295, 421 |
| Tsp45I | GTSAC | 2 cut(s) | 244, 263 |
| TspDTI | ATGAA | 2 cut(s) | 474, 1101 |
| TspRI | CASTG | 3 cut(s) | 136, 253, 268 |
| VneI | GTGCAC | 1 cut(s) | 776 |
| VpaK11BI | GGWCC | 3 cut(s) | 142, 289, 660 |
| XapI | RAATTY | 2 cut(s) | 707, 996 |
| XceI | RCATGY | 1 cut(s) | 399 |
| XmiI | GTMKAC | 1 cut(s) | 640 |
| XmnI | GAANNNNTTC | 1 cut(s) | 90 |
| XspI | CTAG | 1 cut(s) | 47 |
| ZrmI | AGTACT | 1 cut(s) | 90 |
| Zsp2I | ATGCAT | 1 cut(s) | 634 |