Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0004844

Physical Location & Seq

Genomic Coordinates Reverse (-)

33369049 .. 33374064

Gene Structure 5016 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1203800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1902 bp

ATGAGCTCCTCGGTAGCTACTTCAAAATCCAAGCTATCATCTTTCTTCACAAACCCACAAAAACCCACATCCCCAAATCCCAAGACTCCAACCAAGCTTTCACCTTTCTTCGTCCCGACGAACCAATCCTCACAACCCACTTCTCCAAATCCAAAATCTCCACCAAAAACCCCAATTCCCAATCTCCCAATCCAACCCCCACTTCAGAAATTCCTCGAATCCAACTGCAGGTCGGGTAATTTCACTCTCTATGAAGCTCTGCAATATTTTAGTCACATGATTCGAATGCAACCCACTCCTCCAATTTCTTCATTCAATCTTTTATTCAGTGGACTTGCAAAAAGTAAGCATTTCTCTCAAGTTTTTCCACTTTACAATGCGATAATATCAGCTGGGTTGGTGCCAAATTTCATTACTCTTAATGTTTTGCTTAATTGCTGCTGTATTGCCAATCGGGTTGGCGATGGTTTTGTGGTTATGGGGAGTCTTTTTAGAAGGGGATTTCTACCAAGCACTGTGAGTTATACTTGTTTGGTTAAAGGGTTGTGTAGGGAGGATAAAATTTTTGAGGCAACAGGGTTGTTTGAGAAAATGGTAAAGTTGGGGTGCCATCCTAATGAGTTTACTTTTAGTACATTGATTAAAGGGTTGTGTCGAACGGGTAACGTGAACGTTGCGCTTAGGTTGCATGAAGGAATGGCTAATGGGAGTGGTGCTTATAGTGTTGGTTGTCGGCCGAATGTGTTTACTTATGGGACCATCATTGACGGGCTTTGTAAAGCCGGGTTGGTAGATAAGGCGAAAGAACTTTTCGTAGAAATGAAAGGTAGAAGGATTGTTCCTGATGTGAATGTATATAGTTCTTTGATACACGGTCTGTATTACAATGAGAAATGGGAAGCAGCGAAAGCTACGTTAAATGAGATGGTGGATCAGGGTGTCCAGCCTAATTTGGTAACATTCAATGTGTTGATAGGAGTAATTTGCAGAAGGGGAAATGTGAAAGAAAGTAATGACTTGTTAAAGTTGATGATTCGTAGAGGCATAGATCCTGATATAATTACGTACAACATTTTGATTGACGGCTTGTGTTTGGCGGGTAGGCTCAATGAAGCAAGAGAGCTCTTTAATTCTATCCCAAGTAGAGGTTGTGAACCTGATGCCATTAGCTACAATGTGTTGATCAATGGATACTGCAAATATAAGAAGATACAGGAAGCTACCCATTTTTACAAGGAAATGATTAACAAAGGAGTTAGGCCAACAGTAATAACATATAATGCCTTATTAACTGGTCTTTTTCAGATGGGTAAAGTTCAGGATGCACAAGAATTGTTTAGTGAGATGCCAACTCAGAATCTGTTACCAAATTCAACTACATATACAATATTCATGGACGGGCTTTGCAAAAACGATTGCCTAACAGAGGCGATGGAAATTTTCCATACTTTAGAAAATAGCAACTTCAAGCTTAGTGTTGAAATGTTTGGCTGCCTTATTGATGGGTTATGCAAAGCAGGAAAGCTTGAAATTGCTTGGGACCTATTCCACAAAATGTCAAATAGAGGCCTGGTGCCGACTGTTGTAACATATTCCATGATGATCCATGGGCTCTGTATAGATGGGCAACTGGAAAAGGCAAATGGTTTGTTTTTAGAAATGGAAGGGAAGGGGTGTGCTCCAAACATCATCACTTATAATATCCTCATGCGTGGTTTCTGCCAAAATGATGACTCGGCAAAAGTGGTCGAAATTCTTCACAAGATGGCAGAAAGAAATCTGTCACCAGATGCCATTACAGTCTCCATTGTCATAGACCTACTGTCGAAGGATGAAAAATATCGTAAATGTCTGGACTTGCTTCCAACATTTCCTACCACTAGCCAGTGCAAGATGACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0000963 GO:0000966 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004016 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009791 GO:0009845 GO:0009975 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0016829 GO:0016849 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048856 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0090351 GO:0090615 GO:0097159 GO:0140053 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

634

Amino Acids

70.34

Weight (kDa)

8.67

Isoelectric Point (pI)

34.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	102 - 148	7.2e-07	PPR repeat family
PPR_1	PF12854	166 - 199	1.5e-08	PPR repeat
PPR_2	PF13041	170 - 219	8.5e-17	PPR repeat family
PPR	PF01535	173 - 203	1.4e-06	PPR repeat
PPR_1	PF12854	202 - 233	7.9e-11	PPR repeat
PPR_1	PF12854	243 - 275	1.3e-15	PPR repeat
PPR_2	PF13041	246 - 293	2e-14	PPR repeat family
PPR	PF01535	249 - 278	1.7e-08	PPR repeat
PPR_3	PF13812	270 - 329	3.1e-12	Pentatricopeptide repeat domain
PPR_2	PF13041	281 - 330	1.7e-11	PPR repeat family
PPR_1	PF12854	313 - 344	2.5e-06	PPR repeat
PPR_2	PF13041	316 - 364	6.2e-16	PPR repeat family
PPR_3	PF13812	340 - 398	3.3e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	347 - 377	2.5e-13	PPR repeat
PPR_2	PF13041	353 - 400	8.4e-17	PPR repeat family
PPR	PF01535	354 - 384	2.2e-07	PPR repeat
PPR_1	PF12854	382 - 414	3.5e-09	PPR repeat
PPR_2	PF13041	386 - 434	1.5e-16	PPR repeat family
PPR	PF01535	389 - 419	1.6e-07	PPR repeat
PPR_3	PF13812	412 - 465	3.4e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	417 - 449	8.4e-10	PPR repeat
PPR_2	PF13041	421 - 470	5.7e-17	PPR repeat family
PPR_long	PF17177	470 - 605	8.1e-09	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	480 - 535	4.1e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	489 - 520	2e-07	PPR repeat
PPR	PF01535	495 - 524	3.9e-06	PPR repeat
PPR_2	PF13041	495 - 539	3.7e-16	PPR repeat family
PPR_3	PF13812	515 - 572	2e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	522 - 555	7.4e-10	PPR repeat
PPR	PF01535	529 - 559	1.5e-07	PPR repeat
PPR_2	PF13041	534 - 575	1.5e-13	PPR repeat family
PPR_3	PF13812	550 - 607	7e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	557 - 589	5.1e-07	PPR repeat
PPR_2	PF13041	561 - 609	2.2e-12	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0004844)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g22260
malus_domestica	MD05G1203800.v1.1
prunus_persica	Prupe.8G230100_v2.0.a1
pyrus_communis	pycom05g19020
rosa_chinensis	RchiOBHm_Chr6g0289191 RchiOBHm_Chr6g0289221
rosa_laevigata	RLG00000009132 RLG00000009134 RLG00000012320 RLG00000012323 RLG00000012325
rosa_multiflora	Rmu_co8489247.1_g000002 Rmu_sc0001527.1_g000006 Rmu_sc0001527.1_g000010 Rmu_sc0001527.1_g000011
rosa_roxburghii	Rroxscaffold_7G00179440 Rroxscaffold_7G00179500
rosa_rugosa	Rorug06G0201500 Rorug06G0201800 Rorug06G0201900 Rorug06G0202000
rosa_samantha	Rh6AG312700 Rh6AG312900 Rh6BG319700 Rh6BG320300 Rh6BG320400 Rh6CG326100 Rh6CG326400 Rh6DG312100
rosa_wichuraiana	Rw6G027020 Rw6G027040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1698
Acc36I	ACCTGC	1 cut(s)	219
AccB1I	GGYRCC	3 cut(s)	400, 606, 1573
AciI	CCGC	1 cut(s)	1097
AclI	AACGTT	1 cut(s)	672
AclWI	GGATC	3 cut(s)	939, 1043, 1597
AcoI	YGGCCR	1 cut(s)	734
AcsI	RAATTY	6 cut(s)	209, 406, 561, 1369, 1437, 1752
AcuI	CTGAAG	1 cut(s)	188
AfaI	GTAC	2 cut(s)	634, 1067
AfiI	CCNNNNNNNGG	3 cut(s)	228, 1145, 1426
AgsI	TTSAA	7 cut(s)	24, 316, 964, 1374, 1468, 1481, 1529
AhdI	GACNNNNNGTC	1 cut(s)	1822
AjnI	CCWGG	1 cut(s)	1569
AjuI	GAANNNNNNNTTGG	4 cut(s)	82, 114, 186, 218
Alw21I	GWGCWC	3 cut(s)	8, 1125, 1681
Alw26I	GTCTC	1 cut(s)	1807
AlwI	GGATC	3 cut(s)	939, 1043, 1597
AlwNI	CAGNNNCTG	1 cut(s)	1360
AoxI	GGCC	3 cut(s)	734, 1259, 1567
ApeKI	GCWGC	3 cut(s)	438, 902, 1491
ApoI	RAATTY	6 cut(s)	209, 406, 561, 1369, 1437, 1752
Asp700I	GAANNNNTTC	1 cut(s)	1755
AspLEI	GCGC	1 cut(s)	679
AspS9I	GGNCC	2 cut(s)	756, 1540
AsuC2I	CCSGG	1 cut(s)	784
AsuHPI	GGTGA	2 cut(s)	93, 1776
AsuII	TTCGAA	1 cut(s)	283
AvaII	GGWCC	2 cut(s)	756, 1540
BanI	GGYRCC	3 cut(s)	400, 606, 1573
BanII	GRGCYC	3 cut(s)	8, 1125, 1614
Bbv12I	GWGCWC	3 cut(s)	8, 1125, 1681
BbvI	GCAGC	3 cut(s)	425, 914, 1478
BccI	CCATC	9 cut(s)	458, 618, 767, 919, 1300, 1426, 1496, 1616, 1759
BceAI	ACGGC	1 cut(s)	1099
BciT130I	CCWGG	1 cut(s)	1571
BciVI	GTATCC	1 cut(s)	1184
BclI	TGATCA	1 cut(s)	1182
BcnI	CCSGG	1 cut(s)	784
BcoDI	GTCTC	1 cut(s)	1807
BfaI	CTAG	1 cut(s)	1881
BfmI	CTRYAG	1 cut(s)	226
BfuAI	ACCTGC	1 cut(s)	219
BfuI	GTATCC	1 cut(s)	1184
BisI	GCNGC	3 cut(s)	439, 903, 1492
BlsI	GCNGC	3 cut(s)	440, 904, 1493
Bme1390I	CCNGG	2 cut(s)	784, 1571
Bme18I	GGWCC	2 cut(s)	756, 1540
BmeRI	GACNNNNNGTC	1 cut(s)	1822
BmgT120I	GGNCC	2 cut(s)	756, 1540
BmiI	GGNNCC	5 cut(s)	402, 608, 757, 1541, 1575
BmrFI	CCNGG	2 cut(s)	784, 1571
BmsI	GCATC	4 cut(s)	1150, 1312, 1335, 1780
Bpu10I	CCTNAGC	1 cut(s)	680
Bpu14I	TTCGAA	1 cut(s)	283
BpuEI	CTTGAG	1 cut(s)	342
BpuMI	CCSGG	1 cut(s)	784
BsaAI	YACGTR	1 cut(s)	1065
BsaJI	CCNNGG	2 cut(s)	9, 1606
Bsc4I	CCNNNNNNNGG	3 cut(s)	228, 1145, 1426
Bse1I	ACTGG	3 cut(s)	1297, 1635, 1885
BseBI	CCWGG	1 cut(s)	1571
BseDI	CCNNGG	2 cut(s)	9, 1606
BseGI	GGATG	4 cut(s)	68, 610, 1327, 1837
BseLI	CCNNNNNNNGG	3 cut(s)	228, 1145, 1426
BseMII	CTCAG	1 cut(s)	1367
BseNI	ACTGG	3 cut(s)	1297, 1635, 1885
BseRI	GAGGAG	1 cut(s)	288
BseX3I	CGGCCG	1 cut(s)	734
BseXI	GCAGC	3 cut(s)	425, 914, 1478
BseYI	CCCAGC	1 cut(s)	392
Bsh1285I	CGRYCG	1 cut(s)	737
BshFI	GGCC	3 cut(s)	736, 1261, 1569
BshNI	GGYRCC	3 cut(s)	400, 606, 1573
BsiEI	CGRYCG	1 cut(s)	737
BsiHKAI	GWGCWC	3 cut(s)	8, 1125, 1681
BsiSI	CCGG	1 cut(s)	783
BslFI	GGGAC	3 cut(s)	98, 769, 1553
BslI	CCNNNNNNNGG	3 cut(s)	228, 1145, 1426
BsmAI	GTCTC	1 cut(s)	1807
BsmFI	GGGAC	3 cut(s)	98, 769, 1553
BsmI	GAATGC	1 cut(s)	291
BsnI	GGCC	3 cut(s)	736, 1261, 1569
Bsp119I	TTCGAA	1 cut(s)	283
Bsp1286I	GDGCHC	4 cut(s)	8, 1125, 1614, 1681
Bsp143I	GATC	4 cut(s)	931, 1048, 1182, 1602
Bsp19I	CCATGG	1 cut(s)	1606
BspACI	CCGC	1 cut(s)	1097
BspANI	GGCC	3 cut(s)	736, 1261, 1569
BspCNI	CTCAG	1 cut(s)	1366
BspLI	GGNNCC	5 cut(s)	402, 608, 757, 1541, 1575
BspMAI	CTGCAG	1 cut(s)	230
BspMI	ACCTGC	1 cut(s)	219
BspPI	GGATC	3 cut(s)	939, 1043, 1597
BspT104I	TTCGAA	1 cut(s)	283
BspT107I	GGYRCC	3 cut(s)	400, 606, 1573
BsrI	ACTGG	3 cut(s)	1297, 1635, 1885
BssECI	CCNNGG	2 cut(s)	9, 1606
BssMI	GATC	4 cut(s)	931, 1048, 1182, 1602
BssT1I	CCWWGG	1 cut(s)	1606
Bst2UI	CCWGG	1 cut(s)	1571
Bst4CI	ACNGT	6 cut(s)	517, 875, 1267, 1582, 1801, 1824
BstBAI	YACGTR	1 cut(s)	1065
BstBI	TTCGAA	1 cut(s)	283
BstDEI	CTNAG	3 cut(s)	680, 1353, 1472
BstDSI	CCRYGG	1 cut(s)	1606
BstENI	CCTNNNNNAGG	1 cut(s)	1424
BstF5I	GGATG	4 cut(s)	68, 610, 1327, 1837
BstHHI	GCGC	1 cut(s)	679
BstKTI	GATC	4 cut(s)	934, 1051, 1185, 1605
BstMAI	GTCTC	1 cut(s)	1807
BstMBI	GATC	4 cut(s)	931, 1048, 1182, 1602
BstMCI	CGRYCG	1 cut(s)	737
BstMWI	GCNNNNNNNGC	2 cut(s)	685, 908
BstNI	CCWGG	1 cut(s)	1571
BstSCI	CCNGG	2 cut(s)	782, 1569
BstSFI	CTRYAG	1 cut(s)	226
BstSNI	TACGTA	1 cut(s)	1065
BstV1I	GCAGC	3 cut(s)	425, 914, 1478
BstX2I	RGATCY	1 cut(s)	1048
BstYI	RGATCY	1 cut(s)	1048
BstZI	CGGCCG	1 cut(s)	734
BsuI	GTATCC	1 cut(s)	1184
BsuRI	GGCC	3 cut(s)	736, 1261, 1569
BtgI	CCRYGG	1 cut(s)	1606
BtgZI	GCGATG	2 cut(s)	477, 1445
BtsCI	GGATG	4 cut(s)	68, 610, 1327, 1837
BtsIMutI	CAGTG	3 cut(s)	334, 513, 1892
BveI	ACCTGC	1 cut(s)	219
CaiI	CAGNNNCTG	1 cut(s)	1360
CfoI	GCGC	1 cut(s)	679
Cfr13I	GGNCC	2 cut(s)	756, 1540
Csp6I	GTAC	2 cut(s)	633, 1066
CviAII	CATG	7 cut(s)	277, 689, 1393, 1597, 1607, 1708, 1899
CviQI	GTAC	2 cut(s)	633, 1066
DdeI	CTNAG	3 cut(s)	680, 1353, 1472
DpnI	GATC	4 cut(s)	933, 1050, 1184, 1604
DpnII	GATC	4 cut(s)	931, 1048, 1182, 1602
DriI	GACNNNNNGTC	1 cut(s)	1822
EaeI	YGGCCR	1 cut(s)	734
EagI	CGGCCG	1 cut(s)	734
Eam1105I	GACNNNNNGTC	1 cut(s)	1822
Ecl136II	GAGCTC	2 cut(s)	6, 1123
EclXI	CGGCCG	1 cut(s)	734
Eco105I	TACGTA	1 cut(s)	1065
Eco130I	CCWWGG	1 cut(s)	1606
Eco147I	AGGCCT	1 cut(s)	1569
Eco24I	GRGCYC	3 cut(s)	8, 1125, 1614
Eco47I	GGWCC	2 cut(s)	756, 1540
Eco52I	CGGCCG	1 cut(s)	734
Eco53kI	GAGCTC	2 cut(s)	6, 1123
Eco57I	CTGAAG	1 cut(s)	188
EcoICRI	GAGCTC	2 cut(s)	6, 1123
EcoNI	CCTNNNNNAGG	1 cut(s)	1424
EcoO109I	RGGNCCY	1 cut(s)	1540
EcoRII	CCWGG	1 cut(s)	1569
EcoT14I	CCWWGG	1 cut(s)	1606
EcoT38I	GRGCYC	3 cut(s)	8, 1125, 1614
ErhI	CCWWGG	1 cut(s)	1606
FaeI	CATG	7 cut(s)	280, 692, 1396, 1600, 1610, 1711, 1902
FaqI	GGGAC	3 cut(s)	98, 769, 1553
FatI	CATG	7 cut(s)	276, 688, 1392, 1596, 1606, 1707, 1898
FauI	CCCGC	1 cut(s)	1090
FbaI	TGATCA	1 cut(s)	1182
Fnu4HI	GCNGC	3 cut(s)	439, 903, 1492
FokI	GGATG	4 cut(s)	55, 597, 1334, 1844
FriOI	GRGCYC	3 cut(s)	8, 1125, 1614
Fsp4HI	GCNGC	3 cut(s)	439, 903, 1492
FspBI	CTAG	1 cut(s)	1881
GlaI	GCGC	1 cut(s)	678
GluI	GCNGC	3 cut(s)	439, 903, 1492
GsaI	CCCAGC	1 cut(s)	396
HaeIII	GGCC	3 cut(s)	736, 1261, 1569
HapII	CCGG	1 cut(s)	783
HhaI	GCGC	1 cut(s)	679
Hin1II	CATG	7 cut(s)	280, 692, 1396, 1600, 1610, 1711, 1902
Hin6I	GCGC	1 cut(s)	677
HinP1I	GCGC	1 cut(s)	677
HindIII	AAGCTT	3 cut(s)	95, 1469, 1523
HinfI	GANTC	7 cut(s)	85, 218, 280, 484, 1033, 1357, 1733
HpaII	CCGG	1 cut(s)	783
HphI	GGTGA	2 cut(s)	93, 1776
Hpy166II	GTNNAC	5 cut(s)	332, 624, 670, 747, 1154
Hpy188I	TCNGA	3 cut(s)	207, 1305, 1356
Hpy188III	TCNNGA	5 cut(s)	115, 842, 1052, 1319, 1853
Hpy8I	GTNNAC	5 cut(s)	332, 624, 670, 747, 1154
Hpy99I	CGWCG	1 cut(s)	121
HpyAV	CCTTC	7 cut(s)	489, 686, 825, 984, 1658, 1663, 1822
HpyCH4III	ACNGT	6 cut(s)	517, 875, 1267, 1582, 1801, 1824
HpyCH4IV	ACGT	4 cut(s)	666, 672, 914, 1064
HpyF10VI	GCNNNNNNNGC	2 cut(s)	685, 908
HpyF3I	CTNAG	3 cut(s)	680, 1353, 1472
HpySE526I	ACGT	4 cut(s)	666, 672, 914, 1064
Hsp92II	CATG	7 cut(s)	280, 692, 1396, 1600, 1610, 1711, 1902
HspAI	GCGC	1 cut(s)	677
Ksp22I	TGATCA	1 cut(s)	1182
Kzo9I	GATC	4 cut(s)	931, 1048, 1182, 1602
LmnI	GCTCC	2 cut(s)	11, 1684
Lsp1109I	GCAGC	3 cut(s)	425, 914, 1478
LweI	GCATC	4 cut(s)	1150, 1312, 1335, 1780
MaeI	CTAG	1 cut(s)	1881
MaeII	ACGT	4 cut(s)	666, 672, 914, 1064
MaeIII	GTNAC	6 cut(s)	272, 662, 955, 1362, 1585, 1782
MalI	GATC	4 cut(s)	933, 1050, 1184, 1604
MboI	GATC	4 cut(s)	931, 1048, 1182, 1602
MboII	GAAGA	5 cut(s)	37, 100, 300, 1219, 1748
MflI	RGATCY	1 cut(s)	1048
MhlI	GDGCHC	4 cut(s)	8, 1125, 1614, 1681
MlyI	GAGTC	3 cut(s)	79, 493, 1727
MmeI	TCCRAC	4 cut(s)	113, 217, 246, 1889
MroXI	GAANNNNTTC	1 cut(s)	1755
MseI	TTAA	9 cut(s)	420, 432, 537, 642, 917, 1022, 1128, 1245, 1289
MslI	CAYNNNNRTG	1 cut(s)	615
MspA1I	CMGCKG	1 cut(s)	392
MspI	CCGG	1 cut(s)	783
MspR9I	CCNGG	2 cut(s)	784, 1571
Mva1269I	GAATGC	1 cut(s)	291
MvaI	CCWGG	1 cut(s)	1571
MwoI	GCNNNNNNNGC	2 cut(s)	685, 908
NciI	CCSGG	1 cut(s)	784
NcoI	CCATGG	1 cut(s)	1606
NdeII	GATC	4 cut(s)	931, 1048, 1182, 1602
NlaIII	CATG	7 cut(s)	280, 692, 1396, 1600, 1610, 1711, 1902
NlaIV	GGNNCC	5 cut(s)	402, 608, 757, 1541, 1575
NmeAIII	GCCGAG	1 cut(s)	1715
NmuCI	GTSAC	2 cut(s)	272, 1782
NspV	TTCGAA	1 cut(s)	283
PceI	AGGCCT	1 cut(s)	1569
PctI	GAATGC	1 cut(s)	291
PdmI	GAANNNNTTC	1 cut(s)	1755
PfeI	GAWTC	4 cut(s)	218, 280, 1033, 1357
PkrI	GCNGC	3 cut(s)	440, 904, 1493
PleI	GAGTC	3 cut(s)	79, 492, 1727
PpsI	GAGTC	3 cut(s)	79, 492, 1727
Ppu21I	YACGTR	1 cut(s)	1065
PpuMI	RGGWCCY	1 cut(s)	1540
PsiI	TTATAA	1 cut(s)	1698
Psp124BI	GAGCTC	2 cut(s)	8, 1125
Psp1406I	AACGTT	1 cut(s)	672
Psp5II	RGGWCCY	1 cut(s)	1540
Psp6I	CCWGG	1 cut(s)	1569
PspFI	CCCAGC	1 cut(s)	392
PspGI	CCWGG	1 cut(s)	1569
PspN4I	GGNNCC	5 cut(s)	402, 608, 757, 1541, 1575
PspPI	GGNCC	2 cut(s)	756, 1540
PspPPI	RGGWCCY	1 cut(s)	1540
PstI	CTGCAG	1 cut(s)	230
PstNI	CAGNNNCTG	1 cut(s)	1360
PsuI	RGATCY	1 cut(s)	1048
PvuII	CAGCTG	1 cut(s)	392
RsaI	GTAC	2 cut(s)	634, 1067
RsaNI	GTAC	2 cut(s)	633, 1066
RseI	CAYNNNNRTG	1 cut(s)	615
SacI	GAGCTC	2 cut(s)	8, 1125
SaqAI	TTAA	9 cut(s)	420, 432, 537, 642, 917, 1022, 1128, 1245, 1289
SatI	GCNGC	3 cut(s)	439, 903, 1492
Sau3AI	GATC	4 cut(s)	931, 1048, 1182, 1602
Sau96I	GGNCC	2 cut(s)	756, 1540
SchI	GAGTC	3 cut(s)	79, 493, 1727
ScrFI	CCNGG	2 cut(s)	784, 1571
SduI	GDGCHC	4 cut(s)	8, 1125, 1614, 1681
SfaNI	GCATC	4 cut(s)	1150, 1312, 1335, 1780
SfcI	CTRYAG	1 cut(s)	226
SfuI	TTCGAA	1 cut(s)	283
SinI	GGWCC	2 cut(s)	756, 1540
SmiMI	CAYNNNNRTG	1 cut(s)	615
SmlI	CTYRAG	1 cut(s)	357
SmoI	CTYRAG	1 cut(s)	357
SnaBI	TACGTA	1 cut(s)	1065
SseBI	AGGCCT	1 cut(s)	1569
SsiI	CCGC	1 cut(s)	1097
SspI	AATATT	2 cut(s)	266, 1389
SspMI	CTAG	1 cut(s)	1881
SstI	GAGCTC	2 cut(s)	8, 1125
StuI	AGGCCT	1 cut(s)	1569
StyD4I	CCNGG	2 cut(s)	782, 1569
StyI	CCWWGG	1 cut(s)	1606
TaaI	ACNGT	6 cut(s)	517, 875, 1267, 1582, 1801, 1824
TaiI	ACGT	4 cut(s)	669, 675, 917, 1067
TaqI	TCGA	5 cut(s)	216, 283, 655, 1749, 1826
TatI	WGTACW	1 cut(s)	632
TfiI	GAWTC	4 cut(s)	218, 280, 1033, 1357
Tru1I	TTAA	9 cut(s)	420, 432, 537, 642, 917, 1022, 1128, 1245, 1289
Tru9I	TTAA	9 cut(s)	420, 432, 537, 642, 917, 1022, 1128, 1245, 1289
TscAI	CASTG	3 cut(s)	334, 520, 1892
TseFI	GTSAC	2 cut(s)	272, 1782
TseI	GCWGC	3 cut(s)	438, 902, 1491
Tsp45I	GTSAC	2 cut(s)	272, 1782
TspDTI	ATGAA	8 cut(s)	267, 300, 400, 705, 836, 1125, 1381, 1848
TspRI	CASTG	3 cut(s)	334, 520, 1892
VpaK11BI	GGWCC	2 cut(s)	756, 1540
XagI	CCTNNNNNAGG	1 cut(s)	1424
XapI	RAATTY	6 cut(s)	209, 406, 561, 1369, 1437, 1752
XmnI	GAANNNNTTC	1 cut(s)	1755
XspI	CTAG	1 cut(s)	1881

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.