Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0004844

Physical Location & Seq

Genomic Coordinates Forward (+)

19022630 .. 19024273

Gene Structure 1644 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00179440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1644 bp

ATGGGAAGTATGATTAGGAAGGGTTATAGACCAACTACTGTGACTTTTACATCTTTGGTTAAAGGGCTGTGTATGGAGAATAGGATTGATGAGGCAAACAGGTTGTTTGAGAAAATGATCAAGTTCAGGTGTCAGCCTAGTGTGATTTGTTATGGTACTTTGATTAATGGGTTGTGCCGAATGGGCAAGACAGATGTTGCACTTAAGTTACATGAAGAAATGAATAGTGGGAATGGTGTTAGGTTTAGGCCGAATACTGTGACTTTTACATCTTTGATCCAGGGTTTGTGTGTGGAGGATAAGATAGATGAGGCAACCAGTTTGTTTGAGAAAATGAAGAAGTTGCGGTGTCATCCTAGCGTGATTACGTATGGTACTTTGATTAATGGGTTCTGCAGAACAGGCAAGACAGATGTTGCACTTGGTTTACATGAAGAAATGGCTAATGAGAATGGTGGATATGGTGTTGATTGTAAGCCAAATTCAGTTACTTACGGGATTATTATTGATCGGCTTTGTAAAGATGGGATGATAGATAAGGCAACAGAGCTTTTCCTAGAAATGAAAAATAGAGGGATTTTTCCAGATGTGGTTGTGTATAGTATTCTAATACATGGTTTGTACTATAATGAAAAATGGGAAGCCGGTAAAGCTTTGTTACATGAGATGATAGATAGCGGTATCCAGCCTGATTTGGTAACGTTCAATGTGTTAATAGGGGCACTTTGCAGAAGGGGAAATGTGAAAGATAGCCGTGACTTGCTAAAGTTGATGATTCGAAGAGGCATGAATCCCAATATTTTTACTTACAATACTTTGATGGATGGCTTATGTTTGGTGGGTAATCTTAATGAAGCAAGAGAGCTATTTCATTCTATCTCAACTAGGGGGTGTGAACCTGGTGCAATCAGCTACTCTGTGTTAATCAACGGTTACTGCAAGTATAGGAAGATACATGAAGCTATCAATCTTTATGAGGAAATGATCTTCAAAGGAGTTAAGCCAACAGTAATAACATATAATGCCTTATTAACTGGTCTTTTTCAGATGGGCAAAATTCAGGATGCACAGAAACTGTTTGATGAGATGCACACTCAGAATGTGCTACCGGATTCAGCTACATATTTAATATTATTGGATGGCCTTTGCAAACATGATTGCGAACCAGAAGCAATGGATATTTTTCATTCTTTAGAAAATTCCAATTTTAAATTTAATGTTGAAATTTTTAACTGTCTTATGGATGGGTTCTGTAAATCAGGGAAGCTCGAAATTGCTTGGGACCTATTTCACAAAATGTCAAGTAAAGGCCTGCTACCAAATGTTATAACATACTCCATAATGATTCATGGCCTCTGTATAGAAGGCCAACTGGAAAAGGCAAATGGTTTGCTCTTAGAAATGGAAGGAAAGGGTTGTCTTCCAAATGTCATCACTTACAATACCCTAATGCGGGGTTTCTGCCTAAATGATGACTCGACAAAGGTTGTTGAACTGCTGCATAAGATGTCAGAAAGAAATCTGTCACCAGATGACTCTACAATCTCCATTGTCGTAGACTTGCTGTCAAAGGATGAAAGGTTACGTAAATGTCTGGACTTGCTACCCACATTTCCTGCTACTAGCCGATTGAGGATGCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0000963 GO:0000966 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004016 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009791 GO:0009845 GO:0009975 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0016829 GO:0016849 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048856 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0090351 GO:0090615 GO:0097159 GO:0140053 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

547

Amino Acids

61.64

Weight (kDa)

6.68

Isoelectric Point (pI)

25.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_1	PF12854	7 - 39	7.2e-11	PPR repeat
PPR_2	PF13041	11 - 60	2.7e-14	PPR repeat family
PPR	PF01535	14 - 44	3.5e-06	PPR repeat
PPR_1	PF12854	44 - 74	4.5e-11	PPR repeat
PPR_2	PF13041	46 - 76	3.3e-06	PPR repeat family
PPR_3	PF13812	82 - 130	6.7e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	83 - 113	1.3e-09	PPR repeat
PPR_2	PF13041	84 - 133	2.1e-17	PPR repeat family
PPR	PF01535	87 - 117	2.1e-07	PPR repeat
PPR_1	PF12854	117 - 147	8.4e-11	PPR repeat
PPR	PF01535	122 - 149	5.2e-06	PPR repeat
PPR_1	PF12854	157 - 189	1.3e-11	PPR repeat
PPR_2	PF13041	160 - 207	3.9e-16	PPR repeat family
PPR	PF01535	163 - 193	1.2e-07	PPR repeat
PPR_3	PF13812	184 - 242	1.5e-09	Pentatricopeptide repeat domain
PPR_2	PF13041	195 - 244	3e-13	PPR repeat family
PPR_1	PF12854	227 - 258	1.3e-08	PPR repeat
PPR_2	PF13041	230 - 278	6.9e-16	PPR repeat family
PPR	PF01535	233 - 262	2e-06	PPR repeat
PPR_3	PF13812	255 - 312	5.3e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	261 - 291	5.3e-11	PPR repeat
PPR_2	PF13041	266 - 314	7.7e-15	PPR repeat family
PPR	PF01535	268 - 298	3.9e-06	PPR repeat
PPR_long	PF17177	282 - 380	5.9e-06	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	296 - 328	6.7e-09	PPR repeat
PPR_2	PF13041	300 - 348	2.4e-15	PPR repeat family
PPR	PF01535	303 - 333	1.8e-07	PPR repeat
PPR_3	PF13812	324 - 379	1.1e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	331 - 363	1.3e-10	PPR repeat
PPR_2	PF13041	335 - 384	3.4e-17	PPR repeat family
PPR	PF01535	338 - 366	7.2e-06	PPR repeat
PPR_long	PF17177	390 - 520	1.7e-08	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	394 - 449	7.2e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	403 - 434	1.1e-07	PPR repeat
PPR_2	PF13041	406 - 453	2.9e-19	PPR repeat family
PPR	PF01535	409 - 438	3.2e-07	PPR repeat
PPR_3	PF13812	430 - 485	1.7e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	436 - 469	3.4e-10	PPR repeat
PPR	PF01535	443 - 473	3.6e-07	PPR repeat
PPR_2	PF13041	448 - 488	1.8e-12	PPR repeat family
PPR_1	PF12854	471 - 503	6e-08	PPR repeat
PPR_2	PF13041	475 - 523	1.5e-11	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0004844)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g22260
malus_domestica	MD05G1203800.v1.1
prunus_persica	Prupe.8G230100_v2.0.a1
pyrus_communis	pycom05g19020
rosa_chinensis	RchiOBHm_Chr6g0289191 RchiOBHm_Chr6g0289221
rosa_laevigata	RLG00000009132 RLG00000009134 RLG00000012320 RLG00000012323 RLG00000012325
rosa_multiflora	Rmu_co8489247.1_g000002 Rmu_sc0001527.1_g000006 Rmu_sc0001527.1_g000010 Rmu_sc0001527.1_g000011
rosa_roxburghii	Rroxscaffold_7G00179440 Rroxscaffold_7G00179500
rosa_rugosa	Rorug06G0201500 Rorug06G0201800 Rorug06G0201900 Rorug06G0202000
rosa_samantha	Rh6AG312700 Rh6AG312900 Rh6BG319700 Rh6BG320300 Rh6BG320400 Rh6CG326100 Rh6CG326400 Rh6DG312100
rosa_wichuraiana	Rw6G027020 Rw6G027040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1328
AccI	GTMKAC	1 cut(s)	1557
AciI	CCGC	3 cut(s)	346, 678, 1453
AclI	AACGTT	1 cut(s)	701
AclWI	GGATC	1 cut(s)	271
AcsI	RAATTY	5 cut(s)	481, 1056, 1198, 1211, 1224
AfaI	GTAC	3 cut(s)	157, 376, 623
AfiI	CCNNNNNNNGG	2 cut(s)	1452, 1453
AflII	CTTAAG	1 cut(s)	203
AgsI	TTSAA	4 cut(s)	706, 991, 1223, 1493
AhdI	GACNNNNNGTC	1 cut(s)	1564
AjnI	CCWGG	2 cut(s)	279, 898
AluBI	AGCT	7 cut(s)	550, 653, 865, 912, 962, 1118, 1267
AluI	AGCT	7 cut(s)	550, 653, 865, 912, 962, 1118, 1267
AlwI	GGATC	1 cut(s)	271
AlwNI	CAGNNNCTG	1 cut(s)	1075
AoxI	GGCC	5 cut(s)	248, 1141, 1309, 1351, 1366
ApeKI	GCWGC	1 cut(s)	1498
ApoI	RAATTY	5 cut(s)	481, 1056, 1198, 1211, 1224
AseI	ATTAAT	2 cut(s)	165, 384
AspS9I	GGNCC	1 cut(s)	1282
AsuHPI	GGTGA	1 cut(s)	1518
AsuII	TTCGAA	1 cut(s)	778
AvaII	GGWCC	1 cut(s)	1282
BaeGI	GKGCMC	1 cut(s)	724
BbsI	GAAGAC	1 cut(s)	1412
BbvI	GCAGC	1 cut(s)	1485
BccI	CCATC	6 cut(s)	518, 814, 818, 1042, 1133, 1238
BceAI	ACGGC	1 cut(s)	738
BciT130I	CCWGG	2 cut(s)	281, 900
BciVI	GTATCC	1 cut(s)	692
BclI	TGATCA	1 cut(s)	117
BfaI	CTAG	5 cut(s)	138, 357, 557, 885, 1623
BfmI	CTRYAG	1 cut(s)	394
BfrI	CTTAAG	1 cut(s)	203
BfuI	GTATCC	1 cut(s)	692
BglI	GCCNNNNNGGC	1 cut(s)	183
BisI	GCNGC	1 cut(s)	1499
BlsI	GCNGC	1 cut(s)	1500
Bme1390I	CCNGG	2 cut(s)	281, 900
Bme18I	GGWCC	1 cut(s)	1282
BmeRI	GACNNNNNGTC	1 cut(s)	1564
BmgT120I	GGNCC	1 cut(s)	1282
BmiI	GGNNCC	1 cut(s)	1283
BmrFI	CCNGG	2 cut(s)	281, 900
BmsI	GCATC	3 cut(s)	1054, 1077, 1626
BpiI	GAAGAC	1 cut(s)	1412
Bpu14I	TTCGAA	1 cut(s)	778
BsaAI	YACGTR	2 cut(s)	369, 1586
BsaJI	CCNNGG	1 cut(s)	280
BsaWI	WCCGGW	1 cut(s)	1108
Bsc4I	CCNNNNNNNGG	2 cut(s)	1452, 1453
Bse118I	RCCGGY	1 cut(s)	644
Bse1I	ACTGG	3 cut(s)	318, 1039, 1377
Bse3DI	GCAATG	1 cut(s)	1179
BseBI	CCWGG	2 cut(s)	281, 900
BseDI	CCNNGG	1 cut(s)	280
BseGI	GGATG	8 cut(s)	352, 534, 829, 1069, 1144, 1249, 1579, 1641
BseLI	CCNNNNNNNGG	2 cut(s)	1452, 1453
BseMI	GCAATG	1 cut(s)	1179
BseMII	CTCAG	1 cut(s)	1109
BseNI	ACTGG	3 cut(s)	318, 1039, 1377
BseSI	GKGCMC	1 cut(s)	724
BseXI	GCAGC	1 cut(s)	1485
BshFI	GGCC	5 cut(s)	250, 1143, 1311, 1353, 1368
BsiSI	CCGG	2 cut(s)	645, 1109
BslFI	GGGAC	1 cut(s)	1295
BslI	CCNNNNNNNGG	2 cut(s)	1452, 1453
BsmFI	GGGAC	1 cut(s)	1295
BsnI	GGCC	5 cut(s)	250, 1143, 1311, 1353, 1368
Bsp119I	TTCGAA	1 cut(s)	778
Bsp1286I	GDGCHC	1 cut(s)	724
Bsp143I	GATC	4 cut(s)	117, 276, 508, 984
BspACI	CCGC	3 cut(s)	346, 678, 1453
BspANI	GGCC	5 cut(s)	250, 1143, 1311, 1353, 1368
BspCNI	CTCAG	1 cut(s)	1108
BspLI	GGNNCC	1 cut(s)	1283
BspMAI	CTGCAG	1 cut(s)	398
BspPI	GGATC	1 cut(s)	271
BspT104I	TTCGAA	1 cut(s)	778
BspTI	CTTAAG	1 cut(s)	203
BsrDI	GCAATG	1 cut(s)	1179
BsrFI	RCCGGY	1 cut(s)	644
BsrI	ACTGG	3 cut(s)	318, 1039, 1377
BssAI	RCCGGY	1 cut(s)	644
BssECI	CCNNGG	1 cut(s)	280
BssMI	GATC	4 cut(s)	117, 276, 508, 984
Bst2UI	CCWGG	2 cut(s)	281, 900
Bst4CI	ACNGT	6 cut(s)	40, 259, 932, 1009, 1077, 1235
Bst6I	CTCTTC	1 cut(s)	775
BstAFI	CTTAAG	1 cut(s)	203
BstBAI	YACGTR	2 cut(s)	369, 1586
BstBI	TTCGAA	1 cut(s)	778
BstC8I	GCNNGC	1 cut(s)	1313
BstDEI	CTNAG	2 cut(s)	1095, 1396
BstF5I	GGATG	8 cut(s)	352, 534, 829, 1069, 1144, 1249, 1579, 1641
BstKTI	GATC	4 cut(s)	120, 279, 511, 987
BstMBI	GATC	4 cut(s)	117, 276, 508, 984
BstMWI	GCNNNNNNNGC	3 cut(s)	183, 402, 650
BstNI	CCWGG	2 cut(s)	281, 900
BstSCI	CCNGG	2 cut(s)	279, 898
BstSFI	CTRYAG	1 cut(s)	394
BstSLI	GKGCMC	1 cut(s)	724
BstSNI	TACGTA	2 cut(s)	369, 1586
BstV1I	GCAGC	1 cut(s)	1485
BstV2I	GAAGAC	1 cut(s)	1412
BsuI	GTATCC	1 cut(s)	692
BsuRI	GGCC	5 cut(s)	250, 1143, 1311, 1353, 1368
BtsCI	GGATG	8 cut(s)	352, 534, 829, 1069, 1144, 1249, 1579, 1641
Cac8I	GCNNGC	1 cut(s)	1313
CaiI	CAGNNNCTG	1 cut(s)	1075
Cfr10I	RCCGGY	1 cut(s)	644
Cfr13I	GGNCC	1 cut(s)	1282
CsiI	ACCWGGT	1 cut(s)	898
Csp6I	GTAC	3 cut(s)	156, 375, 622
CviAII	CATG	9 cut(s)	212, 431, 614, 662, 787, 956, 1154, 1349, 1641
CviQI	GTAC	3 cut(s)	156, 375, 622
DdeI	CTNAG	2 cut(s)	1095, 1396
DpnI	GATC	4 cut(s)	119, 278, 510, 986
DpnII	GATC	4 cut(s)	117, 276, 508, 984
DraI	TTTAAA	1 cut(s)	1210
DriI	GACNNNNNGTC	1 cut(s)	1564
Eam1104I	CTCTTC	1 cut(s)	775
Eam1105I	GACNNNNNGTC	1 cut(s)	1564
EarI	CTCTTC	1 cut(s)	775
Eco105I	TACGTA	2 cut(s)	369, 1586
Eco147I	AGGCCT	1 cut(s)	1311
Eco47I	GGWCC	1 cut(s)	1282
EcoO109I	RGGNCCY	1 cut(s)	1282
EcoRII	CCWGG	2 cut(s)	279, 898
FaeI	CATG	9 cut(s)	215, 434, 617, 665, 790, 959, 1157, 1352, 1644
FaqI	GGGAC	1 cut(s)	1295
FatI	CATG	9 cut(s)	211, 430, 613, 661, 786, 955, 1153, 1348, 1640
FauI	CCCGC	1 cut(s)	1446
FbaI	TGATCA	1 cut(s)	117
FblI	GTMKAC	1 cut(s)	1557
Fnu4HI	GCNGC	1 cut(s)	1499
FokI	GGATG	7 cut(s)	339, 541, 836, 1076, 1151, 1256, 1586
Fsp4HI	GCNGC	1 cut(s)	1499
FspBI	CTAG	5 cut(s)	138, 357, 557, 885, 1623
GluI	GCNGC	1 cut(s)	1499
HaeIII	GGCC	5 cut(s)	250, 1143, 1311, 1353, 1368
HapII	CCGG	2 cut(s)	645, 1109
Hin1II	CATG	9 cut(s)	215, 434, 617, 665, 790, 959, 1157, 1352, 1644
HindIII	AAGCTT	1 cut(s)	651
HinfI	GANTC	6 cut(s)	775, 790, 1112, 1345, 1475, 1535
HpaII	CCGG	2 cut(s)	645, 1109
HphI	GGTGA	1 cut(s)	1518
Hpy166II	GTNNAC	3 cut(s)	428, 896, 1558
Hpy188I	TCNGA	3 cut(s)	1047, 1098, 1513
Hpy188III	TCNNGA	3 cut(s)	584, 1061, 1595
Hpy8I	GTNNAC	3 cut(s)	428, 896, 1558
HpyAV	CCTTC	4 cut(s)	13, 726, 1358, 1400
HpyCH4III	ACNGT	6 cut(s)	40, 259, 932, 1009, 1077, 1235
HpyCH4IV	ACGT	3 cut(s)	368, 701, 1585
HpyF10VI	GCNNNNNNNGC	3 cut(s)	183, 402, 650
HpyF3I	CTNAG	2 cut(s)	1095, 1396
HpySE526I	ACGT	3 cut(s)	368, 701, 1585
Hsp92II	CATG	9 cut(s)	215, 434, 617, 665, 790, 959, 1157, 1352, 1644
Ksp22I	TGATCA	1 cut(s)	117
Kzo9I	GATC	4 cut(s)	117, 276, 508, 984
Lsp1109I	GCAGC	1 cut(s)	1485
LweI	GCATC	3 cut(s)	1054, 1077, 1626
MabI	ACCWGGT	1 cut(s)	898
MaeI	CTAG	5 cut(s)	138, 357, 557, 885, 1623
MaeII	ACGT	3 cut(s)	368, 701, 1585
MalI	GATC	4 cut(s)	119, 278, 510, 986
MboI	GATC	4 cut(s)	117, 276, 508, 984
MboII	GAAGA	7 cut(s)	227, 349, 446, 792, 961, 979, 1412
MhlI	GDGCHC	1 cut(s)	724
MluCI	AATT	7 cut(s)	481, 1056, 1198, 1204, 1211, 1224, 1272
MlyI	GAGTC	2 cut(s)	1469, 1529
MnlI	CCTC	8 cut(s)	85, 289, 304, 566, 776, 970, 1364, 1626
MspCI	CTTAAG	1 cut(s)	203
MspI	CCGG	2 cut(s)	645, 1109
MspR9I	CCNGG	2 cut(s)	281, 900
MvaI	CCWGG	2 cut(s)	281, 900
MwoI	GCNNNNNNNGC	3 cut(s)	183, 402, 650
NdeII	GATC	4 cut(s)	117, 276, 508, 984
NlaIII	CATG	9 cut(s)	215, 434, 617, 665, 790, 959, 1157, 1352, 1644
NlaIV	GGNNCC	1 cut(s)	1283
NmuCI	GTSAC	4 cut(s)	40, 259, 755, 1524
NspV	TTCGAA	1 cut(s)	778
PceI	AGGCCT	1 cut(s)	1311
PfeI	GAWTC	4 cut(s)	775, 790, 1112, 1345
PkrI	GCNGC	1 cut(s)	1500
PleI	GAGTC	2 cut(s)	1469, 1529
PpsI	GAGTC	2 cut(s)	1469, 1529
Ppu21I	YACGTR	2 cut(s)	369, 1586
PpuMI	RGGWCCY	1 cut(s)	1282
PshBI	ATTAAT	2 cut(s)	165, 384
PsiI	TTATAA	1 cut(s)	1328
Psp1406I	AACGTT	1 cut(s)	701
Psp5II	RGGWCCY	1 cut(s)	1282
Psp6I	CCWGG	2 cut(s)	279, 898
PspGI	CCWGG	2 cut(s)	279, 898
PspN4I	GGNNCC	1 cut(s)	1283
PspPI	GGNCC	1 cut(s)	1282
PspPPI	RGGWCCY	1 cut(s)	1282
PstI	CTGCAG	1 cut(s)	398
PstNI	CAGNNNCTG	1 cut(s)	1075
RsaI	GTAC	3 cut(s)	157, 376, 623
RsaNI	GTAC	3 cut(s)	156, 375, 622
SatI	GCNGC	1 cut(s)	1499
Sau3AI	GATC	4 cut(s)	117, 276, 508, 984
Sau96I	GGNCC	1 cut(s)	1282
SchI	GAGTC	2 cut(s)	1469, 1529
ScrFI	CCNGG	2 cut(s)	281, 900
SduI	GDGCHC	1 cut(s)	724
SexAI	ACCWGGT	1 cut(s)	898
SfaNI	GCATC	3 cut(s)	1054, 1077, 1626
SfcI	CTRYAG	1 cut(s)	394
SfuI	TTCGAA	1 cut(s)	778
SinI	GGWCC	1 cut(s)	1282
SmlI	CTYRAG	1 cut(s)	203
SmoI	CTYRAG	1 cut(s)	203
SnaBI	TACGTA	2 cut(s)	369, 1586
Sse9I	AATT	7 cut(s)	481, 1056, 1198, 1204, 1211, 1224, 1272
SseBI	AGGCCT	1 cut(s)	1311
SsiI	CCGC	3 cut(s)	346, 678, 1453
SspI	AATATT	2 cut(s)	799, 1131
SspMI	CTAG	5 cut(s)	138, 357, 557, 885, 1623
StuI	AGGCCT	1 cut(s)	1311
StyD4I	CCNGG	2 cut(s)	279, 898
TaaI	ACNGT	6 cut(s)	40, 259, 932, 1009, 1077, 1235
TaiI	ACGT	3 cut(s)	371, 704, 1588
TaqI	TCGA	3 cut(s)	778, 1269, 1478
TasI	AATT	7 cut(s)	481, 1056, 1198, 1204, 1211, 1224, 1272
TatI	WGTACW	1 cut(s)	621
TfiI	GAWTC	4 cut(s)	775, 790, 1112, 1345
TseFI	GTSAC	4 cut(s)	40, 259, 755, 1524
TseI	GCWGC	1 cut(s)	1498
Tsp45I	GTSAC	4 cut(s)	40, 259, 755, 1524
Vha464I	CTTAAG	1 cut(s)	203
VpaK11BI	GGWCC	1 cut(s)	1282
VspI	ATTAAT	2 cut(s)	165, 384
XapI	RAATTY	5 cut(s)	481, 1056, 1198, 1211, 1224
XmiI	GTMKAC	1 cut(s)	1557
XspI	CTAG	5 cut(s)	138, 357, 557, 885, 1623

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.